Query 042694
Match_columns 554
No_of_seqs 455 out of 3175
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:53:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f6l_B AUSA reductase domain p 100.0 2.1E-36 7.2E-41 326.2 11.9 350 10-418 44-424 (508)
2 3ruf_A WBGU; rossmann fold, UD 100.0 2E-30 6.7E-35 266.1 18.2 268 108-423 23-296 (351)
3 4egb_A DTDP-glucose 4,6-dehydr 100.0 3.3E-30 1.1E-34 263.9 17.0 263 108-423 22-289 (346)
4 4dqv_A Probable peptide synthe 100.0 2.8E-30 9.5E-35 276.0 16.5 286 108-420 71-380 (478)
5 3m2p_A UDP-N-acetylglucosamine 100.0 2E-29 6.7E-34 254.4 15.5 246 110-422 2-247 (311)
6 4id9_A Short-chain dehydrogena 100.0 1.1E-28 3.9E-33 252.6 15.9 258 107-422 16-295 (347)
7 3slg_A PBGP3 protein; structur 100.0 1.7E-28 5.8E-33 253.8 16.5 271 108-423 22-298 (372)
8 4b8w_A GDP-L-fucose synthase; 100.0 6E-29 2.1E-33 250.7 12.5 253 108-422 4-266 (319)
9 3enk_A UDP-glucose 4-epimerase 100.0 8E-28 2.7E-32 245.6 18.8 263 109-422 4-288 (341)
10 1sb8_A WBPP; epimerase, 4-epim 100.0 7.3E-28 2.5E-32 247.2 18.4 264 108-422 25-300 (352)
11 3sxp_A ADP-L-glycero-D-mannohe 100.0 6.4E-28 2.2E-32 248.7 15.9 258 108-419 8-273 (362)
12 2hun_A 336AA long hypothetical 99.9 2.2E-27 7.6E-32 241.8 18.4 256 110-422 3-265 (336)
13 2c20_A UDP-glucose 4-epimerase 99.9 6E-27 2.1E-31 238.0 21.6 260 110-421 1-274 (330)
14 1rkx_A CDP-glucose-4,6-dehydra 99.9 1.4E-27 4.7E-32 245.6 15.9 266 107-422 6-287 (357)
15 1i24_A Sulfolipid biosynthesis 99.9 4E-27 1.4E-31 246.2 19.1 276 106-417 7-320 (404)
16 2pk3_A GDP-6-deoxy-D-LYXO-4-he 99.9 3.8E-27 1.3E-31 238.5 18.4 253 106-421 8-270 (321)
17 1r6d_A TDP-glucose-4,6-dehydra 99.9 3.3E-27 1.1E-31 240.7 17.6 254 111-421 1-264 (337)
18 3ko8_A NAD-dependent epimerase 99.9 2.7E-27 9.1E-32 238.7 16.5 251 111-422 1-255 (312)
19 2q1s_A Putative nucleotide sug 99.9 1.8E-27 6.2E-32 246.7 14.7 265 108-422 30-308 (377)
20 1oc2_A DTDP-glucose 4,6-dehydr 99.9 3.8E-27 1.3E-31 241.2 16.8 261 110-422 4-275 (348)
21 3ehe_A UDP-glucose 4-epimerase 99.9 4E-27 1.4E-31 237.6 16.3 248 110-422 1-252 (313)
22 1ek6_A UDP-galactose 4-epimera 99.9 2.4E-26 8.2E-31 235.3 22.2 262 110-421 2-291 (348)
23 1gy8_A UDP-galactose 4-epimera 99.9 1.4E-26 4.7E-31 241.6 20.7 275 110-421 2-328 (397)
24 2c5a_A GDP-mannose-3', 5'-epim 99.9 1.1E-26 3.9E-31 240.8 19.0 260 109-421 28-293 (379)
25 1orr_A CDP-tyvelose-2-epimeras 99.9 8.2E-27 2.8E-31 238.5 17.6 270 110-422 1-291 (347)
26 2bll_A Protein YFBG; decarboxy 99.9 1.5E-26 5.1E-31 236.4 17.8 269 111-423 1-275 (345)
27 2x4g_A Nucleoside-diphosphate- 99.9 1.6E-26 5.6E-31 235.9 17.8 248 109-421 12-262 (342)
28 1rpn_A GDP-mannose 4,6-dehydra 99.9 6.4E-27 2.2E-31 238.3 14.5 255 109-421 13-278 (335)
29 4f6c_A AUSA reductase domain p 99.9 7.7E-27 2.6E-31 246.0 13.5 262 109-419 68-343 (427)
30 1e6u_A GDP-fucose synthetase; 99.9 2.1E-26 7.1E-31 233.0 15.1 249 110-421 3-267 (321)
31 2yy7_A L-threonine dehydrogena 99.9 1.1E-26 3.7E-31 234.1 12.1 253 110-419 2-261 (312)
32 1kew_A RMLB;, DTDP-D-glucose 4 99.9 4.7E-26 1.6E-30 234.3 16.5 257 111-422 1-281 (361)
33 2x6t_A ADP-L-glycero-D-manno-h 99.9 5E-26 1.7E-30 234.0 14.6 253 108-421 44-304 (357)
34 1udb_A Epimerase, UDP-galactos 99.9 3.5E-25 1.2E-29 225.7 20.8 261 111-421 1-283 (338)
35 2gn4_A FLAA1 protein, UDP-GLCN 99.9 1.3E-25 4.4E-30 229.7 17.0 240 101-419 12-262 (344)
36 3vps_A TUNA, NAD-dependent epi 99.9 6.6E-27 2.2E-31 236.4 7.3 246 109-422 6-256 (321)
37 2b69_A UDP-glucuronate decarbo 99.9 6.7E-26 2.3E-30 231.7 14.8 257 108-422 25-285 (343)
38 2p5y_A UDP-glucose 4-epimerase 99.9 9.3E-26 3.2E-30 227.3 15.6 249 111-421 1-262 (311)
39 1eq2_A ADP-L-glycero-D-mannohe 99.9 6.7E-26 2.3E-30 228.0 14.1 248 112-421 1-257 (310)
40 3gpi_A NAD-dependent epimerase 99.9 4.9E-26 1.7E-30 226.6 12.2 235 109-424 2-237 (286)
41 1y1p_A ARII, aldehyde reductas 99.9 1E-25 3.4E-30 229.8 13.9 277 106-421 7-293 (342)
42 3dhn_A NAD-dependent epimerase 99.9 3.6E-25 1.2E-29 212.5 17.1 223 110-408 4-226 (227)
43 3sc6_A DTDP-4-dehydrorhamnose 99.9 3.7E-25 1.3E-29 220.3 17.4 224 112-422 7-235 (287)
44 3ajr_A NDP-sugar epimerase; L- 99.9 2.2E-25 7.4E-30 225.2 15.5 248 112-419 1-255 (317)
45 2v6g_A Progesterone 5-beta-red 99.9 3.3E-25 1.1E-29 228.2 16.7 256 110-423 1-275 (364)
46 1t2a_A GDP-mannose 4,6 dehydra 99.9 3.5E-25 1.2E-29 229.2 16.5 259 111-421 25-296 (375)
47 3ius_A Uncharacterized conserv 99.9 2.5E-24 8.5E-29 214.2 21.0 224 110-423 5-231 (286)
48 1db3_A GDP-mannose 4,6-dehydra 99.9 3E-25 1E-29 229.2 14.4 259 110-421 1-272 (372)
49 2z1m_A GDP-D-mannose dehydrata 99.9 5.7E-25 2E-29 224.5 15.9 255 109-421 2-267 (345)
50 2pzm_A Putative nucleotide sug 99.9 3.9E-25 1.3E-29 224.9 13.6 246 105-421 15-265 (330)
51 2q1w_A Putative nucleotide sug 99.9 5.2E-25 1.8E-29 224.2 14.5 245 104-421 15-267 (333)
52 2hrz_A AGR_C_4963P, nucleoside 99.9 1.4E-24 4.9E-29 221.6 17.3 263 108-422 12-286 (342)
53 1n2s_A DTDP-4-, DTDP-glucose o 99.9 7.2E-25 2.5E-29 219.4 14.7 232 111-422 1-238 (299)
54 2ydy_A Methionine adenosyltran 99.9 2.2E-24 7.6E-29 217.6 18.2 240 110-422 2-247 (315)
55 1n7h_A GDP-D-mannose-4,6-dehyd 99.9 7.8E-25 2.7E-29 227.1 15.0 257 111-421 29-301 (381)
56 1z45_A GAL10 bifunctional prot 99.9 1.4E-24 4.8E-29 242.8 17.6 269 108-422 9-303 (699)
57 3nzo_A UDP-N-acetylglucosamine 99.9 3.9E-24 1.3E-28 223.0 19.7 248 103-423 28-286 (399)
58 1z7e_A Protein aRNA; rossmann 99.9 7.4E-25 2.5E-29 243.2 15.0 272 107-422 312-589 (660)
59 2p4h_X Vestitone reductase; NA 99.9 5.6E-25 1.9E-29 222.5 12.8 258 110-419 1-268 (322)
60 1vl0_A DTDP-4-dehydrorhamnose 99.9 4.9E-24 1.7E-28 212.7 19.0 225 109-421 11-240 (292)
61 3st7_A Capsular polysaccharide 99.9 1.9E-25 6.6E-30 230.7 7.6 216 111-421 1-219 (369)
62 4b4o_A Epimerase family protei 99.9 2.5E-24 8.6E-29 215.6 15.3 232 111-422 1-240 (298)
63 2rh8_A Anthocyanidin reductase 99.9 1.1E-24 3.9E-29 221.9 12.4 257 110-419 9-284 (338)
64 2c29_D Dihydroflavonol 4-reduc 99.9 5.9E-24 2E-28 216.6 15.4 261 109-419 4-272 (337)
65 3oh8_A Nucleoside-diphosphate 99.9 5.6E-24 1.9E-28 229.3 14.0 237 110-422 147-387 (516)
66 2jl1_A Triphenylmethane reduct 99.9 5.4E-23 1.8E-27 204.5 18.1 216 111-421 1-220 (287)
67 3rft_A Uronate dehydrogenase; 99.9 1.3E-23 4.4E-28 207.1 13.4 225 109-422 2-226 (267)
68 3dqp_A Oxidoreductase YLBE; al 99.9 4.5E-23 1.5E-27 196.9 13.7 209 111-413 1-210 (219)
69 3e8x_A Putative NAD-dependent 99.9 8.6E-23 3E-27 197.2 15.7 214 108-415 19-235 (236)
70 3ay3_A NAD-dependent epimerase 99.9 1.4E-23 4.7E-28 206.8 9.9 224 110-422 2-225 (267)
71 2ggs_A 273AA long hypothetical 99.9 3.8E-22 1.3E-26 196.8 16.5 224 111-422 1-229 (273)
72 1xq6_A Unknown protein; struct 99.9 5.2E-22 1.8E-26 193.2 15.6 233 109-420 3-252 (253)
73 3e48_A Putative nucleoside-dip 99.9 5.4E-22 1.8E-26 197.6 15.9 217 111-421 1-218 (289)
74 3i6i_A Putative leucoanthocyan 99.9 2.2E-21 7.4E-26 198.5 20.2 230 110-421 10-244 (346)
75 2zcu_A Uncharacterized oxidore 99.9 5.2E-22 1.8E-26 197.2 14.9 212 112-421 1-216 (286)
76 3h2s_A Putative NADH-flavin re 99.9 1E-21 3.4E-26 187.9 15.3 215 111-400 1-215 (224)
77 3ew7_A LMO0794 protein; Q8Y8U8 99.9 2.1E-21 7.2E-26 185.1 15.2 220 111-409 1-220 (221)
78 2wm3_A NMRA-like family domain 99.9 6E-21 2E-25 191.0 18.7 229 110-421 5-236 (299)
79 1xgk_A Nitrogen metabolite rep 99.9 4.4E-20 1.5E-24 189.1 23.3 229 110-422 5-240 (352)
80 1qyd_A Pinoresinol-lariciresin 99.8 3.6E-20 1.2E-24 186.4 17.5 236 110-421 4-243 (313)
81 2a35_A Hypothetical protein PA 99.8 5.4E-21 1.8E-25 181.5 10.4 207 109-408 4-212 (215)
82 2gas_A Isoflavone reductase; N 99.8 4.1E-19 1.4E-23 178.1 21.2 230 110-421 2-237 (307)
83 1qyc_A Phenylcoumaran benzylic 99.8 3.4E-19 1.2E-23 178.8 16.9 230 110-421 4-238 (308)
84 1hdo_A Biliverdin IX beta redu 99.8 4.2E-19 1.4E-23 167.1 15.4 201 111-400 4-204 (206)
85 2bka_A CC3, TAT-interacting pr 99.8 3.5E-19 1.2E-23 172.4 14.8 210 108-399 16-227 (242)
86 3c1o_A Eugenol synthase; pheny 99.8 7.2E-19 2.4E-23 177.7 16.7 231 109-421 3-238 (321)
87 2r6j_A Eugenol synthase 1; phe 99.8 1.3E-18 4.6E-23 175.4 15.9 223 111-421 12-237 (318)
88 2bgk_A Rhizome secoisolaricire 99.8 6.1E-18 2.1E-22 167.2 18.6 239 108-417 14-276 (278)
89 3qvo_A NMRA family protein; st 99.8 2.7E-17 9.3E-22 158.6 18.8 203 109-400 22-224 (236)
90 3m1a_A Putative dehydrogenase; 99.7 3.1E-17 1.1E-21 162.5 17.6 241 109-419 4-267 (281)
91 2dkn_A 3-alpha-hydroxysteroid 99.7 2.5E-18 8.5E-23 167.5 7.5 235 110-408 1-251 (255)
92 3r6d_A NAD-dependent epimerase 99.7 1.4E-16 4.8E-21 151.9 18.9 203 110-400 5-211 (221)
93 1fmc_A 7 alpha-hydroxysteroid 99.7 4E-17 1.4E-21 159.1 15.4 224 108-406 9-253 (255)
94 1spx_A Short-chain reductase f 99.7 2.4E-16 8.1E-21 155.9 18.0 249 108-417 4-276 (278)
95 2pd6_A Estradiol 17-beta-dehyd 99.7 3.6E-16 1.2E-20 153.1 18.9 231 108-409 5-261 (264)
96 3awd_A GOX2181, putative polyo 99.7 1E-16 3.5E-21 156.7 14.6 223 108-400 11-256 (260)
97 1w6u_A 2,4-dienoyl-COA reducta 99.7 8.2E-17 2.8E-21 161.1 13.1 239 108-420 24-287 (302)
98 1cyd_A Carbonyl reductase; sho 99.7 3.7E-16 1.3E-20 151.2 17.0 217 108-400 5-240 (244)
99 1xq1_A Putative tropinone redu 99.7 9.2E-16 3.1E-20 150.5 19.0 220 108-400 12-254 (266)
100 3qiv_A Short-chain dehydrogena 99.7 6.8E-16 2.3E-20 150.4 17.7 217 108-400 7-248 (253)
101 2pnf_A 3-oxoacyl-[acyl-carrier 99.7 5.8E-16 2E-20 150.1 16.6 223 108-400 5-246 (248)
102 1edo_A Beta-keto acyl carrier 99.7 3.8E-16 1.3E-20 151.1 14.4 221 110-400 1-241 (244)
103 3d3w_A L-xylulose reductase; u 99.7 1.9E-15 6.4E-20 146.3 18.6 217 108-400 5-240 (244)
104 4e6p_A Probable sorbitol dehyd 99.7 2.2E-16 7.6E-21 154.5 12.1 230 108-400 6-255 (259)
105 2yut_A Putative short-chain ox 99.7 8.6E-17 2.9E-21 151.6 8.4 184 111-384 1-199 (207)
106 1nff_A Putative oxidoreductase 99.7 5.3E-15 1.8E-19 144.7 21.4 214 108-400 5-237 (260)
107 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.7 9E-16 3.1E-20 151.1 16.0 231 108-400 19-272 (274)
108 3afn_B Carbonyl reductase; alp 99.7 1.2E-15 4.1E-20 148.8 16.1 220 108-400 5-254 (258)
109 3svt_A Short-chain type dehydr 99.7 8.6E-16 3E-20 152.1 15.3 248 108-423 9-277 (281)
110 3osu_A 3-oxoacyl-[acyl-carrier 99.7 1.3E-15 4.6E-20 147.7 16.2 221 109-400 3-243 (246)
111 1gee_A Glucose 1-dehydrogenase 99.7 2.1E-15 7.2E-20 147.5 17.2 224 108-400 5-249 (261)
112 1yxm_A Pecra, peroxisomal tran 99.6 3.9E-15 1.4E-19 148.9 19.2 229 108-400 16-264 (303)
113 2bd0_A Sepiapterin reductase; 99.6 4.3E-15 1.5E-19 143.7 18.8 196 110-383 2-223 (244)
114 2cfc_A 2-(R)-hydroxypropyl-COM 99.6 2.9E-15 9.8E-20 145.5 17.5 219 110-400 2-246 (250)
115 2hq1_A Glucose/ribitol dehydro 99.6 1.1E-15 3.7E-20 148.2 14.3 218 108-400 3-244 (247)
116 2o23_A HADH2 protein; HSD17B10 99.6 6.1E-15 2.1E-19 144.5 19.3 218 108-400 10-258 (265)
117 3ai3_A NADPH-sorbose reductase 99.6 1.1E-15 3.9E-20 149.7 13.8 233 108-400 5-258 (263)
118 2wsb_A Galactitol dehydrogenas 99.6 2.7E-15 9.1E-20 146.1 16.3 220 108-400 9-250 (254)
119 2ph3_A 3-oxoacyl-[acyl carrier 99.6 1.2E-15 4.1E-20 147.7 13.6 219 110-400 1-241 (245)
120 1zk4_A R-specific alcohol dehy 99.6 3.8E-15 1.3E-19 144.7 16.9 219 108-400 4-247 (251)
121 4e3z_A Putative oxidoreductase 99.6 5.7E-15 1.9E-19 145.5 18.2 223 107-400 23-271 (272)
122 3d7l_A LIN1944 protein; APC893 99.6 1.3E-15 4.4E-20 143.0 12.9 185 111-397 4-201 (202)
123 3un1_A Probable oxidoreductase 99.6 8.7E-15 3E-19 143.2 18.9 212 108-400 26-254 (260)
124 1uay_A Type II 3-hydroxyacyl-C 99.6 2.8E-15 9.5E-20 144.7 15.1 209 110-400 2-236 (242)
125 3f9i_A 3-oxoacyl-[acyl-carrier 99.6 4.3E-15 1.5E-19 144.3 16.5 220 107-400 11-245 (249)
126 3lyl_A 3-oxoacyl-(acyl-carrier 99.6 7.6E-15 2.6E-19 142.4 18.0 222 108-400 3-243 (247)
127 3v2h_A D-beta-hydroxybutyrate 99.6 1.7E-14 5.7E-19 142.9 20.5 235 108-400 23-277 (281)
128 3imf_A Short chain dehydrogena 99.6 7.5E-15 2.6E-19 143.4 17.8 226 108-400 4-249 (257)
129 1sby_A Alcohol dehydrogenase; 99.6 9.1E-15 3.1E-19 142.4 18.3 226 108-406 3-245 (254)
130 3i4f_A 3-oxoacyl-[acyl-carrier 99.6 7.4E-15 2.5E-19 143.9 17.7 223 109-401 6-251 (264)
131 2c07_A 3-oxoacyl-(acyl-carrier 99.6 8.2E-15 2.8E-19 145.4 18.0 222 108-400 42-282 (285)
132 2q2v_A Beta-D-hydroxybutyrate 99.6 7.7E-15 2.6E-19 143.1 17.4 231 108-400 2-251 (255)
133 3tpc_A Short chain alcohol deh 99.6 1.3E-14 4.4E-19 141.7 18.9 218 108-400 5-251 (257)
134 2ae2_A Protein (tropinone redu 99.6 6.6E-15 2.3E-19 144.0 16.6 227 108-400 7-253 (260)
135 2zat_A Dehydrogenase/reductase 99.6 3.6E-15 1.2E-19 145.9 14.7 224 108-400 12-255 (260)
136 3s55_A Putative short-chain de 99.6 7E-15 2.4E-19 145.5 16.9 237 108-400 8-275 (281)
137 3ak4_A NADH-dependent quinucli 99.6 6.1E-15 2.1E-19 144.5 16.1 230 108-400 10-259 (263)
138 3pk0_A Short-chain dehydrogena 99.6 9.9E-15 3.4E-19 142.9 17.1 225 108-401 8-251 (262)
139 3gaf_A 7-alpha-hydroxysteroid 99.6 1.3E-14 4.5E-19 141.6 17.7 223 108-400 10-250 (256)
140 1wma_A Carbonyl reductase [NAD 99.6 2.9E-15 9.8E-20 147.4 13.0 124 109-246 3-144 (276)
141 3pgx_A Carveol dehydrogenase; 99.6 4.7E-14 1.6E-18 139.5 21.8 229 108-400 13-276 (280)
142 2uvd_A 3-oxoacyl-(acyl-carrier 99.6 1.4E-14 4.9E-19 140.4 17.7 222 108-400 2-243 (246)
143 3n74_A 3-ketoacyl-(acyl-carrie 99.6 1.8E-14 6.3E-19 140.8 18.5 223 108-400 7-253 (261)
144 1hdc_A 3-alpha, 20 beta-hydrox 99.6 2.6E-14 9.1E-19 139.2 19.4 220 108-400 3-241 (254)
145 2ew8_A (S)-1-phenylethanol deh 99.6 3.3E-14 1.1E-18 138.1 19.9 223 108-400 5-245 (249)
146 1x1t_A D(-)-3-hydroxybutyrate 99.6 1.6E-14 5.5E-19 141.3 17.8 233 108-400 2-256 (260)
147 1yo6_A Putative carbonyl reduc 99.6 4.6E-15 1.6E-19 143.8 13.6 123 109-246 2-157 (250)
148 2rhc_B Actinorhodin polyketide 99.6 4.6E-15 1.6E-19 146.6 13.8 231 108-400 20-273 (277)
149 1h5q_A NADP-dependent mannitol 99.6 1.3E-14 4.5E-19 142.0 16.9 227 108-400 12-261 (265)
150 2z1n_A Dehydrogenase; reductas 99.6 1.9E-14 6.4E-19 140.8 17.9 234 108-400 5-257 (260)
151 3ioy_A Short-chain dehydrogena 99.6 2.5E-14 8.4E-19 144.2 19.2 168 108-328 6-202 (319)
152 3o38_A Short chain dehydrogena 99.6 5.4E-14 1.8E-18 137.9 21.1 224 108-400 20-264 (266)
153 3tzq_B Short-chain type dehydr 99.6 3.7E-14 1.3E-18 139.6 19.6 219 108-400 9-249 (271)
154 3r1i_A Short-chain type dehydr 99.6 3E-14 1E-18 140.5 19.0 223 108-400 30-272 (276)
155 2d1y_A Hypothetical protein TT 99.6 4.8E-14 1.6E-18 137.5 20.2 223 108-400 4-244 (256)
156 3r3s_A Oxidoreductase; structu 99.6 3.9E-14 1.3E-18 141.1 19.9 221 108-400 47-290 (294)
157 4iiu_A 3-oxoacyl-[acyl-carrier 99.6 1.2E-14 4.2E-19 142.6 16.1 222 107-400 23-265 (267)
158 1ae1_A Tropinone reductase-I; 99.6 2.6E-14 8.9E-19 140.8 18.1 228 108-400 19-266 (273)
159 3cxt_A Dehydrogenase with diff 99.6 3.2E-14 1.1E-18 141.5 18.8 228 108-400 32-280 (291)
160 1mxh_A Pteridine reductase 2; 99.6 2.7E-14 9.1E-19 140.9 18.2 226 108-400 9-270 (276)
161 2wyu_A Enoyl-[acyl carrier pro 99.6 1.8E-14 6E-19 141.1 16.3 223 108-400 6-251 (261)
162 4dmm_A 3-oxoacyl-[acyl-carrier 99.6 2.2E-14 7.5E-19 141.0 16.9 220 108-400 26-265 (269)
163 3oid_A Enoyl-[acyl-carrier-pro 99.6 1.3E-14 4.3E-19 141.8 15.1 223 109-400 3-245 (258)
164 3uf0_A Short-chain dehydrogena 99.6 2.3E-14 8E-19 141.1 17.1 224 108-400 29-269 (273)
165 3v2g_A 3-oxoacyl-[acyl-carrier 99.6 5E-14 1.7E-18 138.6 19.4 222 108-400 29-268 (271)
166 3grp_A 3-oxoacyl-(acyl carrier 99.6 2.1E-14 7.3E-19 140.8 16.6 219 108-400 25-262 (266)
167 4iin_A 3-ketoacyl-acyl carrier 99.6 3.8E-14 1.3E-18 139.5 18.4 222 108-400 27-268 (271)
168 1sny_A Sniffer CG10964-PA; alp 99.6 5.5E-14 1.9E-18 137.8 19.4 128 107-246 18-178 (267)
169 3qlj_A Short chain dehydrogena 99.6 1.6E-14 5.3E-19 146.0 15.5 239 108-421 25-313 (322)
170 3op4_A 3-oxoacyl-[acyl-carrier 99.6 3.7E-14 1.3E-18 137.7 17.5 219 108-400 7-244 (248)
171 1yb1_A 17-beta-hydroxysteroid 99.6 1.8E-14 6.2E-19 141.9 15.5 125 108-246 29-172 (272)
172 3tjr_A Short chain dehydrogena 99.6 3.6E-14 1.2E-18 141.8 17.8 217 108-383 29-265 (301)
173 1xhl_A Short-chain dehydrogena 99.6 1.9E-14 6.7E-19 143.5 15.5 241 108-409 24-286 (297)
174 3rih_A Short chain dehydrogena 99.6 4.2E-14 1.4E-18 140.7 17.9 223 108-400 39-281 (293)
175 3tox_A Short chain dehydrogena 99.6 4.3E-14 1.5E-18 139.7 17.9 226 108-400 6-252 (280)
176 3gk3_A Acetoacetyl-COA reducta 99.6 4.5E-14 1.5E-18 138.8 17.8 227 107-400 22-265 (269)
177 3pxx_A Carveol dehydrogenase; 99.6 9.5E-15 3.3E-19 144.9 12.9 245 108-400 8-282 (287)
178 3ucx_A Short chain dehydrogena 99.6 1.8E-14 6.3E-19 141.2 14.6 232 107-400 8-260 (264)
179 3gvc_A Oxidoreductase, probabl 99.6 2.7E-14 9.4E-19 140.9 15.9 226 108-400 27-271 (277)
180 4da9_A Short-chain dehydrogena 99.6 3.4E-14 1.2E-18 140.5 16.6 223 108-400 27-274 (280)
181 3ijr_A Oxidoreductase, short c 99.6 3.4E-14 1.2E-18 141.3 16.5 223 108-400 45-286 (291)
182 1iy8_A Levodione reductase; ox 99.6 4.1E-14 1.4E-18 138.9 16.8 232 108-400 11-262 (267)
183 3ftp_A 3-oxoacyl-[acyl-carrier 99.6 2.3E-14 7.7E-19 141.0 14.9 223 107-400 25-266 (270)
184 4dqx_A Probable oxidoreductase 99.6 4.3E-14 1.5E-18 139.5 16.8 225 108-400 25-268 (277)
185 3v8b_A Putative dehydrogenase, 99.6 2.1E-13 7.3E-18 135.0 21.8 233 108-400 26-278 (283)
186 2gdz_A NAD+-dependent 15-hydro 99.6 1.5E-14 5.2E-19 142.0 13.3 233 108-409 5-257 (267)
187 3rd5_A Mypaa.01249.C; ssgcid, 99.6 3.3E-14 1.1E-18 141.4 15.9 124 108-247 14-145 (291)
188 1xkq_A Short-chain reductase f 99.6 6E-14 2.1E-18 138.7 17.6 234 108-400 4-261 (280)
189 3ctm_A Carbonyl reductase; alc 99.6 2.8E-14 9.6E-19 140.9 15.0 219 108-400 32-275 (279)
190 2fwm_X 2,3-dihydro-2,3-dihydro 99.6 1.6E-13 5.3E-18 133.4 20.0 223 108-400 5-245 (250)
191 3sju_A Keto reductase; short-c 99.6 2.6E-14 9E-19 141.3 14.7 234 107-400 21-275 (279)
192 4ibo_A Gluconate dehydrogenase 99.6 1.7E-14 5.9E-19 141.9 13.2 224 108-400 24-266 (271)
193 1hxh_A 3BETA/17BETA-hydroxyste 99.6 5.8E-14 2E-18 136.7 16.8 226 108-400 4-247 (253)
194 3rkr_A Short chain oxidoreduct 99.6 7.1E-14 2.4E-18 136.8 17.3 124 108-245 27-170 (262)
195 2p91_A Enoyl-[acyl-carrier-pro 99.6 8.1E-14 2.8E-18 138.2 17.7 223 108-400 19-265 (285)
196 3tl3_A Short-chain type dehydr 99.6 7.3E-14 2.5E-18 136.3 16.9 217 108-400 7-251 (257)
197 3sx2_A Putative 3-ketoacyl-(ac 99.6 1.1E-13 3.7E-18 136.7 18.2 237 108-400 11-274 (278)
198 3oig_A Enoyl-[acyl-carrier-pro 99.6 1.5E-13 5.2E-18 134.7 19.2 225 108-400 5-252 (266)
199 3dii_A Short-chain dehydrogena 99.6 1.6E-13 5.4E-18 133.1 19.0 211 110-400 2-228 (247)
200 2a4k_A 3-oxoacyl-[acyl carrier 99.5 7.1E-14 2.4E-18 136.9 16.3 220 108-400 4-238 (263)
201 3l77_A Short-chain alcohol deh 99.5 1.7E-13 5.9E-18 131.7 18.6 198 109-385 1-217 (235)
202 3gem_A Short chain dehydrogena 99.5 2.5E-13 8.4E-18 132.8 19.9 214 108-400 25-254 (260)
203 4eso_A Putative oxidoreductase 99.5 1.2E-13 4E-18 134.7 17.2 224 108-400 6-246 (255)
204 3ek2_A Enoyl-(acyl-carrier-pro 99.5 4E-14 1.4E-18 139.1 13.7 233 106-410 10-266 (271)
205 1uls_A Putative 3-oxoacyl-acyl 99.5 1.8E-13 6.1E-18 132.6 17.9 218 108-400 3-237 (245)
206 1qsg_A Enoyl-[acyl-carrier-pro 99.5 9.7E-14 3.3E-18 136.1 16.2 220 108-400 7-253 (265)
207 3kzv_A Uncharacterized oxidore 99.5 2.7E-13 9.4E-18 132.0 19.2 226 110-400 2-247 (254)
208 3rwb_A TPLDH, pyridoxal 4-dehy 99.5 9.4E-14 3.2E-18 134.7 15.8 222 108-400 4-243 (247)
209 1o5i_A 3-oxoacyl-(acyl carrier 99.5 3.1E-13 1.1E-17 131.2 19.5 217 106-400 15-243 (249)
210 3h7a_A Short chain dehydrogena 99.5 1.9E-13 6.6E-18 132.9 18.0 124 108-245 5-146 (252)
211 3ezl_A Acetoacetyl-COA reducta 99.5 6.2E-14 2.1E-18 136.6 14.3 222 107-400 10-252 (256)
212 3edm_A Short chain dehydrogena 99.5 2.1E-13 7.3E-18 133.2 17.9 222 108-400 6-247 (259)
213 4egf_A L-xylulose reductase; s 99.5 1.9E-13 6.5E-18 134.1 17.4 225 108-400 18-262 (266)
214 2qhx_A Pteridine reductase 1; 99.5 2E-13 6.9E-18 138.0 18.0 228 108-400 44-322 (328)
215 2dtx_A Glucose 1-dehydrogenase 99.5 8.9E-14 3E-18 136.3 14.8 116 108-246 6-138 (264)
216 3nrc_A Enoyl-[acyl-carrier-pro 99.5 1.6E-13 5.4E-18 135.7 16.6 223 108-400 24-270 (280)
217 4fc7_A Peroxisomal 2,4-dienoyl 99.5 5.2E-14 1.8E-18 139.0 13.0 227 107-400 24-269 (277)
218 3grk_A Enoyl-(acyl-carrier-pro 99.5 3.3E-13 1.1E-17 134.3 18.8 223 108-400 29-274 (293)
219 3is3_A 17BETA-hydroxysteroid d 99.5 7.7E-14 2.6E-18 137.2 14.1 233 108-400 16-268 (270)
220 4dyv_A Short-chain dehydrogena 99.5 1.9E-13 6.6E-18 134.5 16.8 205 108-385 26-252 (272)
221 2ehd_A Oxidoreductase, oxidore 99.5 1.9E-13 6.4E-18 131.3 16.2 119 110-246 5-142 (234)
222 3oec_A Carveol dehydrogenase ( 99.5 1.8E-13 6.1E-18 137.8 16.8 237 108-400 44-312 (317)
223 1xg5_A ARPG836; short chain de 99.5 2.1E-13 7.1E-18 134.8 16.9 125 108-245 30-176 (279)
224 3tsc_A Putative oxidoreductase 99.5 6.5E-13 2.2E-17 131.0 20.4 233 108-400 9-273 (277)
225 1xu9_A Corticosteroid 11-beta- 99.5 2E-13 6.8E-18 135.4 16.7 125 108-245 26-168 (286)
226 3a28_C L-2.3-butanediol dehydr 99.5 2.7E-13 9.2E-18 132.3 17.3 123 110-246 2-146 (258)
227 3vtz_A Glucose 1-dehydrogenase 99.5 9.8E-14 3.4E-18 136.4 14.2 224 106-400 10-252 (269)
228 3f1l_A Uncharacterized oxidore 99.5 2.9E-13 1E-17 131.6 17.3 215 107-400 9-245 (252)
229 3u5t_A 3-oxoacyl-[acyl-carrier 99.5 2.4E-13 8.3E-18 133.4 16.5 223 108-400 25-265 (267)
230 3icc_A Putative 3-oxoacyl-(acy 99.5 1.8E-13 6.2E-18 133.1 15.5 224 108-400 5-252 (255)
231 2jah_A Clavulanic acid dehydro 99.5 2.9E-13 9.8E-18 131.3 16.5 123 108-245 5-146 (247)
232 1vl8_A Gluconate 5-dehydrogena 99.5 2.3E-13 8E-18 133.5 16.0 226 107-400 18-263 (267)
233 3uxy_A Short-chain dehydrogena 99.5 1.6E-13 5.4E-18 134.7 14.5 220 108-400 26-262 (266)
234 1g0o_A Trihydroxynaphthalene r 99.5 3.1E-13 1.1E-17 133.8 16.7 123 108-244 27-167 (283)
235 3ppi_A 3-hydroxyacyl-COA dehyd 99.5 3.5E-13 1.2E-17 133.2 17.0 218 108-400 28-275 (281)
236 1zem_A Xylitol dehydrogenase; 99.5 2.7E-13 9.3E-18 132.7 15.8 125 108-246 5-149 (262)
237 2x9g_A PTR1, pteridine reducta 99.5 4.9E-13 1.7E-17 132.7 17.6 221 108-400 21-282 (288)
238 1ooe_A Dihydropteridine reduct 99.5 2.4E-13 8.3E-18 130.8 14.8 207 109-400 2-227 (236)
239 3t7c_A Carveol dehydrogenase; 99.5 6.2E-13 2.1E-17 132.7 18.3 237 107-400 25-295 (299)
240 3t4x_A Oxidoreductase, short c 99.5 2.2E-13 7.4E-18 133.8 14.7 238 108-400 8-261 (267)
241 2pd4_A Enoyl-[acyl-carrier-pro 99.5 4.9E-13 1.7E-17 131.8 17.2 220 108-400 4-249 (275)
242 1yde_A Retinal dehydrogenase/r 99.5 2.9E-13 9.9E-18 133.1 15.5 223 108-400 7-248 (270)
243 2ag5_A DHRS6, dehydrogenase/re 99.5 2.3E-13 7.9E-18 131.8 14.6 222 108-400 4-242 (246)
244 1geg_A Acetoin reductase; SDR 99.5 3.3E-13 1.1E-17 131.6 15.7 229 110-400 2-252 (256)
245 1uzm_A 3-oxoacyl-[acyl-carrier 99.5 2.9E-13 9.9E-18 131.3 15.1 213 108-400 13-242 (247)
246 3k31_A Enoyl-(acyl-carrier-pro 99.5 6.2E-13 2.1E-17 132.5 17.6 223 108-400 28-273 (296)
247 3guy_A Short-chain dehydrogena 99.5 5.6E-13 1.9E-17 127.7 16.5 122 110-246 1-135 (230)
248 3uve_A Carveol dehydrogenase ( 99.5 6.3E-13 2.2E-17 131.8 17.4 237 108-400 9-282 (286)
249 3u9l_A 3-oxoacyl-[acyl-carrier 99.5 3E-13 1E-17 136.4 15.2 122 109-245 4-150 (324)
250 1fjh_A 3alpha-hydroxysteroid d 99.5 1.2E-13 4.2E-18 134.5 11.7 111 110-245 1-118 (257)
251 4e4y_A Short chain dehydrogena 99.5 2.6E-13 8.9E-18 131.3 13.9 222 109-400 3-240 (244)
252 3nyw_A Putative oxidoreductase 99.5 5.3E-13 1.8E-17 129.6 15.8 203 108-384 5-225 (250)
253 3l6e_A Oxidoreductase, short-c 99.5 1.1E-12 3.7E-17 126.2 17.7 121 109-246 2-140 (235)
254 4dry_A 3-oxoacyl-[acyl-carrier 99.5 1.2E-12 4.1E-17 129.4 18.3 209 108-385 31-261 (281)
255 3asu_A Short-chain dehydrogena 99.5 9.6E-13 3.3E-17 127.6 17.0 118 111-245 1-138 (248)
256 3tfo_A Putative 3-oxoacyl-(acy 99.5 9.2E-13 3.2E-17 128.9 17.0 125 108-246 2-145 (264)
257 3rku_A Oxidoreductase YMR226C; 99.5 9.7E-13 3.3E-17 130.5 17.3 130 107-245 30-179 (287)
258 2b4q_A Rhamnolipids biosynthes 99.5 7.8E-13 2.7E-17 130.4 16.4 223 108-400 27-273 (276)
259 2fr1_A Erythromycin synthase, 99.5 5.5E-13 1.9E-17 141.8 16.0 200 107-383 223-440 (486)
260 1e7w_A Pteridine reductase; di 99.5 1.2E-12 4.2E-17 130.0 17.3 227 108-400 7-285 (291)
261 3ksu_A 3-oxoacyl-acyl carrier 99.5 6.8E-13 2.3E-17 129.8 15.0 218 108-400 9-250 (262)
262 1dhr_A Dihydropteridine reduct 99.5 6.4E-13 2.2E-17 128.3 14.6 203 108-400 5-230 (241)
263 2ekp_A 2-deoxy-D-gluconate 3-d 99.5 1E-12 3.5E-17 126.7 15.9 221 110-400 2-235 (239)
264 3p19_A BFPVVD8, putative blue 99.5 1.1E-12 3.8E-17 128.6 16.2 206 108-384 14-236 (266)
265 2nm0_A Probable 3-oxacyl-(acyl 99.5 5.1E-13 1.7E-17 130.0 13.6 213 108-400 19-248 (253)
266 3orf_A Dihydropteridine reduct 99.4 4.1E-13 1.4E-17 130.5 12.6 201 109-400 21-242 (251)
267 2nwq_A Probable short-chain de 99.4 2.2E-12 7.4E-17 126.9 17.0 120 111-245 22-162 (272)
268 4imr_A 3-oxoacyl-(acyl-carrier 99.4 1.7E-12 5.7E-17 127.9 15.6 226 108-400 31-274 (275)
269 3zv4_A CIS-2,3-dihydrobiphenyl 99.4 2.1E-12 7.3E-17 127.6 16.3 121 108-245 3-146 (281)
270 3uce_A Dehydrogenase; rossmann 99.4 1E-12 3.4E-17 125.3 13.1 204 108-400 4-219 (223)
271 3e9n_A Putative short-chain de 99.4 1.9E-12 6.5E-17 125.2 15.2 215 108-399 3-227 (245)
272 2z5l_A Tylkr1, tylactone synth 99.4 5.8E-13 2E-17 142.2 12.6 221 107-415 256-490 (511)
273 1jtv_A 17 beta-hydroxysteroid 99.4 1.6E-12 5.5E-17 131.4 14.7 129 109-245 1-146 (327)
274 3lf2_A Short chain oxidoreduct 99.4 5.6E-12 1.9E-16 123.4 17.3 236 108-400 6-260 (265)
275 1y7t_A Malate dehydrogenase; N 99.4 2.3E-13 8E-18 137.5 7.2 177 110-329 4-188 (327)
276 3i1j_A Oxidoreductase, short c 99.4 4E-12 1.4E-16 123.0 15.2 126 107-245 11-158 (247)
277 3gdg_A Probable NADP-dependent 99.4 4.4E-12 1.5E-16 124.3 15.4 125 108-245 18-164 (267)
278 3sc4_A Short chain dehydrogena 99.4 5.8E-12 2E-16 124.8 16.2 124 108-245 7-156 (285)
279 3o26_A Salutaridine reductase; 99.4 4.8E-12 1.6E-16 126.6 15.6 127 108-246 10-185 (311)
280 2h7i_A Enoyl-[acyl-carrier-pro 99.4 6E-12 2.1E-16 123.5 15.7 123 108-244 5-152 (269)
281 2qq5_A DHRS1, dehydrogenase/re 99.4 5.1E-12 1.7E-16 123.4 13.2 124 108-245 3-153 (260)
282 3kvo_A Hydroxysteroid dehydrog 99.3 1.5E-11 5.1E-16 125.0 16.4 125 108-246 43-193 (346)
283 1zmt_A Haloalcohol dehalogenas 99.3 5.2E-12 1.8E-16 122.9 12.2 224 110-400 1-242 (254)
284 3u0b_A Oxidoreductase, short c 99.3 2.5E-11 8.7E-16 127.7 18.2 216 108-400 211-449 (454)
285 3e03_A Short chain dehydrogena 99.3 1.8E-11 6.1E-16 120.5 15.4 125 108-246 4-154 (274)
286 1gz6_A Estradiol 17 beta-dehyd 99.3 3.1E-11 1.1E-15 121.4 15.8 120 108-244 7-154 (319)
287 1oaa_A Sepiapterin reductase; 99.3 2.5E-11 8.5E-16 118.4 14.2 126 108-245 4-160 (259)
288 3ged_A Short-chain dehydrogena 99.3 3.1E-10 1.1E-14 109.2 19.2 211 110-400 2-228 (247)
289 3mje_A AMPHB; rossmann fold, o 99.2 2.9E-11 1E-15 128.2 12.6 162 110-326 239-419 (496)
290 4fn4_A Short chain dehydrogena 99.2 1.7E-10 5.7E-15 111.5 16.3 226 108-400 5-250 (254)
291 1zmo_A Halohydrin dehalogenase 99.2 2.8E-10 9.7E-15 109.8 16.9 120 110-246 1-139 (244)
292 4g81_D Putative hexonate dehyd 99.2 1.6E-10 5.4E-15 111.7 14.1 224 108-400 7-250 (255)
293 3qp9_A Type I polyketide synth 99.2 1.9E-10 6.7E-15 123.2 15.7 127 107-246 248-407 (525)
294 4b79_A PA4098, probable short- 99.2 4.5E-10 1.5E-14 107.4 16.3 222 106-400 7-238 (242)
295 4fgs_A Probable dehydrogenase 99.2 3.7E-10 1.2E-14 110.2 14.6 167 106-326 25-208 (273)
296 4gkb_A 3-oxoacyl-[acyl-carrier 99.1 1.3E-09 4.4E-14 105.7 17.6 228 108-400 5-249 (258)
297 4hp8_A 2-deoxy-D-gluconate 3-d 99.1 7.6E-10 2.6E-14 106.0 14.4 168 108-326 7-187 (247)
298 4fs3_A Enoyl-[acyl-carrier-pro 99.1 3.2E-09 1.1E-13 103.1 19.0 225 108-400 4-251 (256)
299 1d7o_A Enoyl-[acyl-carrier pro 99.1 3E-09 1E-13 105.7 17.5 236 108-400 6-284 (297)
300 3oml_A GH14720P, peroxisomal m 99.1 1.6E-09 5.5E-14 118.5 15.8 121 107-244 16-164 (613)
301 4h15_A Short chain alcohol deh 99.0 4.3E-09 1.5E-13 102.3 14.6 115 108-244 9-142 (261)
302 2o2s_A Enoyl-acyl carrier redu 98.8 2.8E-08 9.5E-13 99.6 14.6 135 108-245 7-183 (315)
303 3slk_A Polyketide synthase ext 98.8 2.1E-08 7.2E-13 112.6 11.4 161 108-325 528-707 (795)
304 3lt0_A Enoyl-ACP reductase; tr 98.7 1.6E-07 5.5E-12 94.6 16.1 133 109-244 1-175 (329)
305 2uv8_A Fatty acid synthase sub 98.7 4E-08 1.4E-12 116.4 13.0 123 108-244 673-831 (1887)
306 2ptg_A Enoyl-acyl carrier redu 98.7 4.9E-08 1.7E-12 97.9 12.0 243 108-400 7-304 (319)
307 2uv9_A Fatty acid synthase alp 98.7 3E-08 1E-12 117.2 11.3 123 108-244 650-806 (1878)
308 2pff_A Fatty acid synthase sub 98.7 1.8E-08 6.2E-13 115.6 6.5 126 108-243 474-631 (1688)
309 2cq8_A 10-formyltetrahydrofola 98.6 1E-08 3.5E-13 84.5 0.6 51 12-68 26-87 (110)
310 2et6_A (3R)-hydroxyacyl-COA de 98.5 5.5E-07 1.9E-11 98.0 13.7 124 108-244 320-457 (604)
311 1smk_A Malate dehydrogenase, g 98.5 6E-07 2.1E-11 90.1 12.5 121 109-244 7-128 (326)
312 1b8p_A Protein (malate dehydro 98.5 1.5E-07 5E-12 94.8 6.9 121 110-241 5-134 (329)
313 1hye_A L-lactate/malate dehydr 98.4 6.7E-07 2.3E-11 89.3 10.2 121 111-244 1-125 (313)
314 3ic5_A Putative saccharopine d 98.4 9E-07 3.1E-11 74.3 8.9 95 109-237 4-98 (118)
315 3zu3_A Putative reductase YPO4 98.4 1.2E-05 4E-10 81.8 18.2 123 108-244 45-234 (405)
316 4eue_A Putative reductase CA_C 98.3 9.3E-06 3.2E-10 83.8 16.6 121 108-243 58-247 (418)
317 1o6z_A MDH, malate dehydrogena 98.3 2.6E-06 8.9E-11 84.5 11.6 119 111-244 1-122 (303)
318 4i4d_A Peptide synthetase NRPS 98.3 1.3E-07 4.3E-12 76.5 1.3 38 25-62 24-65 (93)
319 2et6_A (3R)-hydroxyacyl-COA de 98.3 7.1E-06 2.4E-10 89.2 15.2 124 108-244 6-153 (604)
320 1dny_A Non-ribosomal peptide s 98.3 1.7E-07 5.8E-12 75.4 1.3 47 10-62 13-63 (91)
321 3s8m_A Enoyl-ACP reductase; ro 98.3 1.7E-05 5.7E-10 81.4 15.9 121 109-244 60-249 (422)
322 2vz8_A Fatty acid synthase; tr 98.1 1.1E-05 3.8E-10 100.7 11.6 125 107-244 1881-2024(2512)
323 1ff9_A Saccharopine reductase; 97.9 2.7E-05 9.4E-10 81.5 10.6 107 110-234 3-118 (450)
324 1lu9_A Methylene tetrahydromet 97.9 8.7E-06 3E-10 80.2 5.2 80 108-202 117-198 (287)
325 5mdh_A Malate dehydrogenase; o 97.6 0.00011 3.8E-09 73.5 7.8 118 110-240 3-129 (333)
326 1mld_A Malate dehydrogenase; o 97.5 0.0003 1E-08 69.9 10.4 114 111-239 1-116 (314)
327 1lss_A TRK system potassium up 97.5 0.0005 1.7E-08 59.0 10.5 73 110-202 4-79 (140)
328 3tej_A Enterobactin synthase c 97.5 1.9E-05 6.6E-10 79.2 1.5 54 10-69 10-72 (329)
329 2hmt_A YUAA protein; RCK, KTN, 97.5 0.00023 8E-09 61.5 8.0 101 109-242 5-106 (144)
330 4dg8_A PA1221; ANL superfamily 97.4 2.6E-05 8.9E-10 85.4 0.0 46 25-70 532-587 (620)
331 3zen_D Fatty acid synthase; tr 97.3 0.00068 2.3E-08 85.0 11.8 108 108-229 2134-2276(3089)
332 2jgp_A Tyrocidine synthetase 3 97.3 4.7E-05 1.6E-09 81.4 1.3 54 10-69 9-71 (520)
333 4ina_A Saccharopine dehydrogen 97.3 0.0003 1E-08 72.6 7.0 81 110-202 1-86 (405)
334 2axq_A Saccharopine dehydrogen 97.3 0.00079 2.7E-08 70.6 10.1 112 104-233 17-137 (467)
335 2afd_A Protein ASL1650; twiste 97.3 9.1E-05 3.1E-09 58.5 2.1 29 34-62 37-65 (88)
336 3llv_A Exopolyphosphatase-rela 97.2 0.0012 4.1E-08 57.0 9.2 72 109-201 5-79 (141)
337 2ju1_A Erythronolide synthase; 97.2 0.00013 4.3E-09 58.7 1.8 28 35-62 45-72 (95)
338 2gk4_A Conserved hypothetical 97.1 0.00055 1.9E-08 64.3 5.9 78 109-206 2-98 (232)
339 3abi_A Putative uncharacterize 97.0 0.00091 3.1E-08 68.0 7.2 95 110-244 16-110 (365)
340 1id1_A Putative potassium chan 96.9 0.0029 9.8E-08 55.5 8.6 75 110-202 3-81 (153)
341 2kr5_A PKS, aflatoxin biosynth 96.8 0.00054 1.9E-08 54.1 2.3 29 34-62 34-62 (89)
342 3rg2_A Enterobactin synthase c 96.7 0.00059 2E-08 74.5 2.9 44 25-69 553-606 (617)
343 2vsq_A Surfactin synthetase su 96.7 0.00033 1.1E-08 83.3 0.9 45 25-69 980-1033(1304)
344 3fi9_A Malate dehydrogenase; s 96.6 0.0049 1.7E-07 61.7 8.2 114 106-235 4-119 (343)
345 1u7z_A Coenzyme A biosynthesis 96.5 0.0026 8.8E-08 59.5 5.6 76 108-205 6-100 (226)
346 2liu_A CURA; holo state, trans 96.3 0.0015 5E-08 52.7 2.2 28 35-62 45-72 (99)
347 1l0i_A Acyl carrier protein; a 96.2 0.0026 9E-08 48.7 3.0 29 34-62 26-55 (78)
348 4ggo_A Trans-2-enoyl-COA reduc 96.2 0.013 4.4E-07 59.1 8.6 81 108-203 48-151 (401)
349 2ava_A ACP I, acyl carrier pro 96.1 0.0021 7.3E-08 49.8 2.1 29 34-62 28-56 (82)
350 3l4b_C TRKA K+ channel protien 96.1 0.012 4.1E-07 54.8 7.5 73 111-201 1-74 (218)
351 3c85_A Putative glutathione-re 96.1 0.027 9.4E-07 50.7 9.7 73 109-202 38-115 (183)
352 2ehs_A ACP, acyl carrier prote 96.0 0.0034 1.2E-07 47.8 3.0 29 34-62 24-53 (77)
353 2g1u_A Hypothetical protein TM 96.0 0.016 5.5E-07 50.7 7.8 78 107-202 16-94 (155)
354 3hhp_A Malate dehydrogenase; M 96.0 0.028 9.7E-07 55.4 10.0 116 111-241 1-118 (312)
355 2cnr_A FAS, ACP, acyl carrier 95.9 0.0046 1.6E-07 47.7 3.3 28 35-62 31-59 (82)
356 2l22_A Mupirocin didomain acyl 95.8 0.0032 1.1E-07 58.6 2.3 28 35-62 154-181 (212)
357 1or5_A Acyl carrier protein; A 95.8 0.0035 1.2E-07 48.7 2.1 30 33-62 29-58 (83)
358 2lol_A ACP, acyl carrier prote 95.8 0.0044 1.5E-07 47.8 2.5 27 36-62 31-58 (81)
359 1x3o_A Acyl carrier protein; s 95.7 0.0058 2E-07 46.9 3.0 29 34-62 28-57 (80)
360 1pqw_A Polyketide synthase; ro 95.7 0.015 5.1E-07 53.1 6.1 35 108-145 37-71 (198)
361 1jay_A Coenzyme F420H2:NADP+ o 95.6 0.0074 2.5E-07 55.9 3.8 31 111-144 1-31 (212)
362 1nq4_A Oxytetracycline polyket 95.4 0.0058 2E-07 48.9 2.1 29 34-62 31-59 (95)
363 2l22_A Mupirocin didomain acyl 95.4 0.0049 1.7E-07 57.3 1.9 27 36-62 51-77 (212)
364 2kjs_A Putative acyl carrier p 95.4 0.0065 2.2E-07 47.7 2.3 27 36-62 27-54 (87)
365 3vku_A L-LDH, L-lactate dehydr 95.4 0.074 2.5E-06 52.7 10.4 114 109-241 8-125 (326)
366 3pqe_A L-LDH, L-lactate dehydr 95.3 0.075 2.6E-06 52.7 10.4 114 110-241 5-122 (326)
367 2jq4_A AGR_C_4658P, hypothetic 95.3 0.0096 3.3E-07 48.6 3.1 29 34-62 47-75 (105)
368 3fwz_A Inner membrane protein 95.1 0.059 2E-06 46.2 7.7 73 111-202 8-81 (140)
369 1f80_D Acyl carrier protein; t 95.1 0.011 3.7E-07 45.5 2.6 29 34-62 30-59 (81)
370 2z2v_A Hypothetical protein PH 95.0 0.042 1.4E-06 55.6 7.5 72 109-201 15-86 (365)
371 1af8_A Actinorhodin polyketide 94.9 0.011 3.9E-07 46.0 2.4 29 34-62 32-60 (86)
372 2cg5_B Fatty acid synthase; tr 94.9 0.015 5E-07 46.0 3.0 27 36-62 32-58 (91)
373 2dnw_A Acyl carrier protein; A 94.9 0.014 4.7E-07 47.0 2.9 28 35-62 39-67 (99)
374 2eez_A Alanine dehydrogenase; 94.7 0.04 1.4E-06 55.8 6.6 74 108-202 164-239 (369)
375 2hjs_A USG-1 protein homolog; 94.6 0.03 1E-06 56.0 5.3 34 111-144 7-40 (340)
376 1zud_1 Adenylyltransferase THI 94.6 0.26 9E-06 46.8 11.6 109 105-246 23-156 (251)
377 3gzm_A Acyl carrier protein; h 94.6 0.016 5.6E-07 44.6 2.6 29 34-62 28-57 (81)
378 1jw9_B Molybdopterin biosynthe 94.5 0.098 3.3E-06 49.8 8.3 109 106-243 27-156 (249)
379 3h8v_A Ubiquitin-like modifier 94.5 0.31 1.1E-05 47.3 11.8 38 105-145 31-68 (292)
380 4h7p_A Malate dehydrogenase; s 94.4 0.41 1.4E-05 47.7 12.9 120 110-241 24-150 (345)
381 2qnw_A Acyl carrier protein; m 94.3 0.021 7.2E-07 44.0 2.6 29 34-62 30-59 (82)
382 1klp_A ACP, ACPM, meromycolate 94.3 0.021 7.2E-07 47.3 2.7 29 34-62 30-59 (115)
383 1qor_A Quinone oxidoreductase; 94.2 0.071 2.4E-06 52.8 7.0 76 108-201 139-218 (327)
384 7mdh_A Protein (malate dehydro 94.1 0.33 1.1E-05 48.8 11.5 120 108-241 30-158 (375)
385 1wly_A CAAR, 2-haloacrylate re 94.1 0.11 3.7E-06 51.6 8.0 77 108-202 144-224 (333)
386 1v3u_A Leukotriene B4 12- hydr 94.0 0.085 2.9E-06 52.4 7.1 76 108-201 144-223 (333)
387 2l3v_A ACP, acyl carrier prote 94.0 0.0042 1.4E-07 47.7 -2.2 29 34-62 27-56 (79)
388 3ejb_A Acyl carrier protein; p 93.9 0.031 1.1E-06 44.8 2.8 29 34-62 45-74 (97)
389 2amw_A Hypothetical protein NE 93.8 0.034 1.2E-06 43.0 2.9 29 34-62 27-57 (83)
390 2ozp_A N-acetyl-gamma-glutamyl 93.5 0.066 2.3E-06 53.6 5.0 33 110-144 4-36 (345)
391 2hcy_A Alcohol dehydrogenase 1 93.4 0.12 4.2E-06 51.5 6.9 77 108-202 168-248 (347)
392 3h5n_A MCCB protein; ubiquitin 93.3 0.44 1.5E-05 47.7 10.8 105 105-242 113-243 (353)
393 2kwl_A ACP, acyl carrier prote 93.3 0.039 1.3E-06 42.6 2.4 29 34-62 32-61 (84)
394 1yb5_A Quinone oxidoreductase; 93.3 0.12 4.2E-06 51.7 6.7 34 108-144 169-202 (351)
395 2nqt_A N-acetyl-gamma-glutamyl 93.1 0.041 1.4E-06 55.2 2.9 33 110-144 9-46 (352)
396 2zb4_A Prostaglandin reductase 93.1 0.12 4.2E-06 51.7 6.5 78 108-201 157-239 (357)
397 2j8z_A Quinone oxidoreductase; 93.1 0.14 4.8E-06 51.3 6.9 77 108-202 161-241 (354)
398 3tnl_A Shikimate dehydrogenase 92.9 0.17 5.8E-06 49.8 7.0 83 108-202 152-236 (315)
399 2aef_A Calcium-gated potassium 92.9 0.1 3.4E-06 49.0 5.1 71 110-201 9-80 (234)
400 1ur5_A Malate dehydrogenase; o 92.7 0.45 1.6E-05 46.6 9.8 114 111-242 3-120 (309)
401 1dih_A Dihydrodipicolinate red 92.6 0.11 3.7E-06 50.1 5.0 27 110-137 5-31 (273)
402 1p9o_A Phosphopantothenoylcyst 92.6 0.094 3.2E-06 51.4 4.5 30 108-137 34-82 (313)
403 1oju_A MDH, malate dehydrogena 92.6 0.55 1.9E-05 45.6 10.0 113 111-241 1-118 (294)
404 2x0j_A Malate dehydrogenase; o 92.4 1.2 4E-05 43.3 12.1 114 111-241 1-118 (294)
405 1y6j_A L-lactate dehydrogenase 92.1 0.42 1.4E-05 47.1 8.7 115 110-243 7-125 (318)
406 4f3y_A DHPR, dihydrodipicolina 92.0 0.28 9.7E-06 47.1 7.1 34 110-144 7-40 (272)
407 2j3h_A NADP-dependent oxidored 92.0 0.15 5.3E-06 50.7 5.5 77 108-201 154-234 (345)
408 2eih_A Alcohol dehydrogenase; 91.9 0.32 1.1E-05 48.4 7.6 76 108-201 165-244 (343)
409 4b7c_A Probable oxidoreductase 91.8 0.2 6.9E-06 49.7 6.0 78 108-202 148-228 (336)
410 3oj0_A Glutr, glutamyl-tRNA re 91.8 0.097 3.3E-06 44.9 3.2 70 109-203 20-91 (144)
411 3pwk_A Aspartate-semialdehyde 91.7 0.28 9.4E-06 49.3 6.9 35 111-145 3-37 (366)
412 2lte_A Specialized acyl carrie 91.0 0.032 1.1E-06 45.2 0.0 27 36-62 51-77 (103)
413 3p7m_A Malate dehydrogenase; p 91.7 1 3.5E-05 44.4 10.9 114 110-241 5-122 (321)
414 4eye_A Probable oxidoreductase 91.6 0.5 1.7E-05 47.0 8.7 76 108-202 158-237 (342)
415 3tl2_A Malate dehydrogenase; c 91.6 1.5 5.3E-05 42.9 12.0 114 110-241 8-127 (315)
416 4dup_A Quinone oxidoreductase; 91.6 0.28 9.7E-06 49.0 6.9 77 108-202 166-245 (353)
417 2zqz_A L-LDH, L-lactate dehydr 91.5 1.4 4.6E-05 43.6 11.6 111 110-239 9-123 (326)
418 1dv5_A APO-DCP, APO-D-alanyl c 91.4 0.1 3.5E-06 39.9 2.6 29 34-62 27-56 (80)
419 2px6_A Thioesterase domain; th 91.3 0.041 1.4E-06 54.2 0.3 22 41-62 1-22 (316)
420 1y8q_B Anthracycline-, ubiquit 91.3 0.68 2.3E-05 49.8 9.7 111 105-247 12-147 (640)
421 1y8q_A Ubiquitin-like 1 activa 91.3 1.1 3.6E-05 44.8 10.6 109 105-247 31-164 (346)
422 3jyn_A Quinone oxidoreductase; 91.2 0.34 1.2E-05 47.8 7.0 77 108-202 139-219 (325)
423 3l9w_A Glutathione-regulated p 91.2 0.7 2.4E-05 47.3 9.4 73 110-201 4-77 (413)
424 1vku_A Acyl carrier protein; T 91.2 0.12 4.2E-06 41.5 3.0 29 34-62 40-68 (100)
425 2xxj_A L-LDH, L-lactate dehydr 91.1 1.5 5.2E-05 42.8 11.5 110 111-239 1-114 (310)
426 1ez4_A Lactate dehydrogenase; 91.1 1.3 4.6E-05 43.4 11.0 111 110-239 5-119 (318)
427 3d0o_A L-LDH 1, L-lactate dehy 91.0 1.9 6.5E-05 42.3 12.1 116 110-242 6-124 (317)
428 1xyg_A Putative N-acetyl-gamma 91.0 0.15 5.3E-06 51.2 4.2 33 110-144 16-48 (359)
429 4g65_A TRK system potassium up 91.0 0.24 8.1E-06 51.6 5.8 71 109-199 2-75 (461)
430 3nep_X Malate dehydrogenase; h 90.9 1.6 5.4E-05 42.8 11.3 115 111-241 1-118 (314)
431 2fq1_A Isochorismatase; ENTB, 90.7 0.083 2.8E-06 51.4 1.9 26 36-62 239-264 (287)
432 2kw2_A Specialized acyl carrie 90.6 0.15 5E-06 41.0 3.0 28 35-62 27-55 (101)
433 4aj2_A L-lactate dehydrogenase 90.6 1 3.5E-05 44.5 9.7 117 108-241 17-136 (331)
434 3gvi_A Malate dehydrogenase; N 90.6 1 3.5E-05 44.4 9.6 115 109-241 6-124 (324)
435 3qwb_A Probable quinone oxidor 90.4 0.37 1.3E-05 47.7 6.4 77 108-202 147-227 (334)
436 1vkn_A N-acetyl-gamma-glutamyl 90.4 0.27 9.1E-06 49.1 5.2 35 109-145 12-46 (351)
437 3vh1_A Ubiquitin-like modifier 90.4 1.9 6.6E-05 45.8 12.0 87 106-202 323-442 (598)
438 3pzr_A Aspartate-semialdehyde 90.3 0.57 2E-05 47.0 7.6 34 111-144 1-35 (370)
439 2c0c_A Zinc binding alcohol de 90.3 0.43 1.5E-05 47.9 6.8 77 108-202 162-241 (362)
440 2ep5_A 350AA long hypothetical 90.2 0.45 1.5E-05 47.6 6.7 32 110-143 4-35 (350)
441 1fh1_A NODF, nodulation protei 90.1 0.051 1.8E-06 42.9 -0.2 29 34-62 35-63 (92)
442 3tz6_A Aspartate-semialdehyde 90.1 0.51 1.7E-05 46.9 7.0 35 110-145 1-36 (344)
443 4dxe_H ACP, acyl carrier prote 90.0 0.18 6.2E-06 40.5 3.0 29 34-62 49-78 (101)
444 1jvb_A NAD(H)-dependent alcoho 90.0 0.59 2E-05 46.5 7.5 77 108-202 169-250 (347)
445 3gms_A Putative NADPH:quinone 89.9 0.55 1.9E-05 46.6 7.1 77 108-202 143-223 (340)
446 2l4b_A Acyl carrier protein; i 89.5 0.21 7.2E-06 38.8 2.9 29 34-62 34-63 (88)
447 1nyt_A Shikimate 5-dehydrogena 89.3 0.58 2E-05 44.9 6.5 35 108-146 117-151 (271)
448 1guz_A Malate dehydrogenase; o 89.2 2.5 8.6E-05 41.2 11.2 114 111-241 1-118 (310)
449 1pzg_A LDH, lactate dehydrogen 89.2 0.76 2.6E-05 45.5 7.4 116 110-242 9-133 (331)
450 3rui_A Ubiquitin-like modifier 89.1 1.4 4.8E-05 43.6 9.1 36 107-145 31-66 (340)
451 4gsl_A Ubiquitin-like modifier 89.0 1.3 4.4E-05 47.2 9.4 85 108-202 324-441 (615)
452 3jyo_A Quinate/shikimate dehyd 89.0 0.85 2.9E-05 44.0 7.5 78 108-202 125-204 (283)
453 1iz0_A Quinone oxidoreductase; 88.6 0.49 1.7E-05 46.0 5.6 34 108-144 124-157 (302)
454 2v6b_A L-LDH, L-lactate dehydr 88.4 1.5 5.1E-05 42.7 8.9 112 111-241 1-116 (304)
455 3ldh_A Lactate dehydrogenase; 88.3 2.9 9.9E-05 41.2 10.9 115 109-241 20-138 (330)
456 1ldn_A L-lactate dehydrogenase 87.9 2.5 8.6E-05 41.4 10.3 115 110-241 6-123 (316)
457 2vn8_A Reticulon-4-interacting 87.7 1.3 4.5E-05 44.5 8.3 74 108-202 182-258 (375)
458 2lki_A Putative uncharacterize 87.5 0.34 1.2E-05 39.2 3.0 29 34-62 49-79 (105)
459 1tt5_B Ubiquitin-activating en 87.1 2.9 0.0001 42.8 10.5 76 108-201 38-138 (434)
460 3pi7_A NADH oxidoreductase; gr 86.8 1.5 5E-05 43.6 7.9 75 110-202 165-243 (349)
461 1hyh_A L-hicdh, L-2-hydroxyiso 86.7 1.6 5.4E-05 42.6 8.0 114 111-241 2-122 (309)
462 2vz8_A Fatty acid synthase; tr 86.7 0.13 4.4E-06 64.7 0.0 38 25-62 2131-2175(2512)
463 2egg_A AROE, shikimate 5-dehyd 86.5 0.93 3.2E-05 44.1 6.1 75 108-203 139-215 (297)
464 2vhw_A Alanine dehydrogenase; 86.5 0.82 2.8E-05 46.2 5.9 74 108-202 166-241 (377)
465 1p9l_A Dihydrodipicolinate red 86.3 1.4 4.6E-05 41.6 6.9 26 111-137 1-26 (245)
466 1pjc_A Protein (L-alanine dehy 86.0 1 3.4E-05 45.2 6.3 74 108-202 165-240 (361)
467 1a5z_A L-lactate dehydrogenase 85.9 3.2 0.00011 40.6 9.8 111 111-239 1-114 (319)
468 3t4e_A Quinate/shikimate dehyd 85.9 1.1 3.8E-05 43.8 6.3 83 108-202 146-230 (312)
469 3gaz_A Alcohol dehydrogenase s 85.7 1.3 4.5E-05 43.9 6.9 75 108-202 149-226 (343)
470 2r00_A Aspartate-semialdehyde 85.6 0.55 1.9E-05 46.6 4.0 34 110-144 3-37 (336)
471 2cdc_A Glucose dehydrogenase g 85.6 1.8 6.3E-05 43.2 8.0 71 110-202 181-256 (366)
472 3tqh_A Quinone oxidoreductase; 85.4 1.3 4.3E-05 43.5 6.6 74 108-202 151-225 (321)
473 2ph5_A Homospermidine synthase 85.4 1.1 3.9E-05 46.2 6.3 99 111-243 14-115 (480)
474 1lnq_A MTHK channels, potassiu 85.1 0.78 2.7E-05 45.4 4.9 69 110-201 115-186 (336)
475 1rjw_A ADH-HT, alcohol dehydro 85.1 1.7 5.8E-05 43.0 7.4 76 108-202 163-240 (339)
476 1yqd_A Sinapyl alcohol dehydro 84.8 1.5 5.2E-05 43.9 6.9 74 109-203 187-262 (366)
477 2o7s_A DHQ-SDH PR, bifunctiona 84.8 1.1 3.9E-05 47.3 6.2 34 108-145 362-395 (523)
478 2nvu_B Maltose binding protein 84.6 4.4 0.00015 45.2 11.2 107 109-247 410-551 (805)
479 3dr3_A N-acetyl-gamma-glutamyl 84.1 0.78 2.7E-05 45.5 4.3 32 110-143 4-35 (337)
480 2d8a_A PH0655, probable L-thre 84.0 1.7 5.9E-05 43.0 6.9 76 109-202 167-246 (348)
481 2i6t_A Ubiquitin-conjugating e 83.9 5.5 0.00019 38.7 10.3 107 109-237 13-121 (303)
482 1tt5_A APPBP1, amyloid protein 83.6 1.1 3.7E-05 47.4 5.3 119 105-247 27-163 (531)
483 4dpl_A Malonyl-COA/succinyl-CO 83.4 0.74 2.5E-05 46.1 3.8 33 110-144 7-39 (359)
484 4dpk_A Malonyl-COA/succinyl-CO 83.4 0.74 2.5E-05 46.1 3.8 33 110-144 7-39 (359)
485 3gg2_A Sugar dehydrogenase, UD 83.2 1.3 4.6E-05 45.7 5.8 39 111-153 3-43 (450)
486 1t2d_A LDH-P, L-lactate dehydr 82.5 4.8 0.00017 39.4 9.3 111 110-238 4-123 (322)
487 2kci_A Putative acyl carrier p 82.3 0.72 2.5E-05 35.8 2.5 29 34-62 25-54 (87)
488 2cgq_A Acyl carrier protein AC 82.3 0.81 2.8E-05 37.5 3.0 31 32-62 46-77 (113)
489 2ewd_A Lactate dehydrogenase,; 82.0 4.3 0.00015 39.7 8.7 104 110-230 4-111 (317)
490 1mv8_A GMD, GDP-mannose 6-dehy 82.0 1.4 4.9E-05 45.3 5.4 31 111-145 1-31 (436)
491 3ce7_A Specific mitochodrial a 82.0 0.86 2.9E-05 36.9 3.0 27 36-62 43-75 (107)
492 2yv3_A Aspartate-semialdehyde 81.9 0.69 2.4E-05 45.8 2.9 34 111-144 1-34 (331)
493 3cmm_A Ubiquitin-activating en 81.8 3.9 0.00013 46.6 9.3 111 104-246 21-152 (1015)
494 1nvt_A Shikimate 5'-dehydrogen 81.4 1.1 3.7E-05 43.3 4.1 33 108-145 126-158 (287)
495 3fbg_A Putative arginate lyase 81.2 2.1 7.2E-05 42.4 6.3 34 109-145 150-183 (346)
496 3p2o_A Bifunctional protein fo 81.1 2.4 8.2E-05 40.7 6.2 59 108-205 158-216 (285)
497 3gqv_A Enoyl reductase; medium 81.0 3.9 0.00013 40.8 8.3 77 108-202 163-241 (371)
498 3gxh_A Putative phosphatase (D 80.9 4.1 0.00014 35.2 7.3 73 119-202 25-107 (157)
499 2l9f_A CALE8, meacp; transfera 80.7 0.8 2.7E-05 36.5 2.3 27 36-62 39-66 (102)
500 3ijp_A DHPR, dihydrodipicolina 80.7 2.4 8.3E-05 40.8 6.2 36 109-145 20-55 (288)
No 1
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-36 Score=326.24 Aligned_cols=350 Identities=17% Similarity=0.152 Sum_probs=176.6
Q ss_pred CCcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----ccccceeeCCCCCCCccc
Q 042694 10 SVAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLVLSPNGKGHAEI 80 (554)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~~~~~~~~~~~~ 80 (554)
+..+.+++. +|++++..+.+ |||++|||||+|++|+++|++ +|+.+ ++.||+......-.+. .
T Consensus 44 ~~~e~~l~~------~w~~~l~~~~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~-~ 115 (508)
T 4f6l_B 44 NEIEQTFVD------VFGEVLKQNDVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQN-Q 115 (508)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHH------HHHHHhCCCCCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhh-c
Confidence 444556666 99987775544 999999999999999999986 88876 3777775322110000 0
Q ss_pred ccccccccCCCCchhHhhh-cc------cchhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hH
Q 042694 81 VVQDLVPFGGQATSLVELQ-DG------IGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LF 148 (554)
Q Consensus 81 ~~~~~~~l~~~~~~~~~~~-~~------~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~ 148 (554)
..+..+......+.... .. ......-.+++|||||||||||++|+++|++.+. +|+|+.+. ..
T Consensus 116 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLVTGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~ 190 (508)
T 4f6l_B 116 --QSLVALPDNLSELQKIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAW 190 (508)
T ss_dssp -----CCCCSTHHHHHHHHHHHHTTCCCSTTSCBCCCEEEEESCTTSHHHHHHHHHTBTTEE---EEEEEEESSSHHHHH
T ss_pred --cccccchhhhHHHHHHhhhcccccccccccccCCCCeEEEECCccchHHHHHHHHHhcCC---EEEEEECCCChHHHH
Confidence 00111111000000000 00 0001112468999999999999999999976553 67776432 23
Q ss_pred HHHHHHcCCc----hhhhccCcEEEEEccCCC-CCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHH
Q 042694 149 KCLKQTYGKS----YQAFMLSKLVPAVGNVCE-NNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRL 223 (554)
Q Consensus 149 ~~l~~~~~~~----~~~~~~~kv~~v~GDl~~-~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~l 223 (554)
.++.+..... .......++.++.||+++ +.++ +..++|+|||+||.+++..+++.++++|+.||.++
T Consensus 191 ~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~l 262 (508)
T 4f6l_B 191 YKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDV 262 (508)
T ss_dssp HHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccchhccCceEEEecCCcccccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHH
Confidence 3443322111 122345799999999999 6665 56799999999999999889999999999999999
Q ss_pred HHHHHHcCCCceEEEEeeceecccccc-eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHH
Q 042694 224 MEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQ 302 (554)
Q Consensus 224 l~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae 302 (554)
+++|++ +.++|||+||.++ |...+ ...+.++++.+...+. .+.. .|..+|+.+|
T Consensus 263 l~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~----------~~~~------------~Y~~sK~~~E 317 (508)
T 4f6l_B 263 IRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ----------LLTS------------PYTRSKFYSE 317 (508)
T ss_dssp HHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSB----------CCCS------------HHHHHHHHHH
T ss_pred HHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccccccccccc----------cCCC------------cHHHHHHHHH
Confidence 999997 6789999999999 54211 1122333332221000 0111 3555678888
Q ss_pred HHHhhhhhcCCCcEEEEccceeeecccCCccccccCC---CCccceeeeec-cceeeeeecCCCcccccchhhHHHHHHH
Q 042694 303 KMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN---RMMDPIILYYG-KGQLTGFLVDPNGILDVVPADMVVNATL 378 (554)
Q Consensus 303 ~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~---~~~~~i~~~~~-~G~~~~~~~~~~~~~d~vpVD~va~aii 378 (554)
.++..+.+ .|++++|+||+.|+|+... +|.... ..+..++.... .+.++. ++++...+++||||+|++++
T Consensus 318 ~~~~~~~~-~gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~g~~~~~~v~v~DvA~ai~ 391 (508)
T 4f6l_B 318 LKVLEAVN-NGLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLDCIGV--SMAEMPVDFSFVDTTARQIV 391 (508)
T ss_dssp HHHHHHHH-TTCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCSEEET--TGGGSEEECEEHHHHHHHHH
T ss_pred HHHHHHHH-cCCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcCCCCC--CccCceEEEEcHHHHHHHHH
Confidence 88777654 5999999999999998764 331110 00111111111 222321 23577899999999999999
Q ss_pred HHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 379 AAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 379 ~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
.++.... .+++||++++ ++++|.|+++.+.+..
T Consensus 392 ~~~~~~~-----~~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 392 ALAQVNT-----PQIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp HHTTBCC-----SCSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred HHHhCCC-----CCCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 9876533 3589999999 7999999999999764
No 2
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=99.97 E-value=2e-30 Score=266.15 Aligned_cols=268 Identities=14% Similarity=0.151 Sum_probs=189.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|||||||||||++|+++|++.++ +|+++.+. ....+...... .......++.++.||+.++ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~------~ 92 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ---VVIGLDNFSTGHQYNLDEVKTL-VSTEQWSRFCFIEGDIRDL------T 92 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHHHT-SCHHHHTTEEEEECCTTCH------H
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCCCchhhhhhhhhc-cccccCCceEEEEccCCCH------H
Confidence 5789999999999999999999999886 45555431 11111111100 0001126899999999987 8
Q ss_pred HHHHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCC
Q 042694 185 LADVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGD 261 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~ 261 (554)
.+..+++++|+|||+||..... ..+...+++|+.||.+++++|++. ++++|||+||.++|+...+ .++.+..
T Consensus 93 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~----~~~~E~~ 167 (351)
T 3ruf_A 93 TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPA----LPKVEEN 167 (351)
T ss_dssp HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC----SSBCTTC
T ss_pred HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCC----CCCccCC
Confidence 8999999999999999987653 356678999999999999999985 7999999999999987431 2232222
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCC
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRM 341 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~ 341 (554)
+. .+.. .|..+|..+|.+++.+....|++++|+||+.|||+...+...+.. .
T Consensus 168 ~~-------------~p~~------------~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~---~ 219 (351)
T 3ruf_A 168 IG-------------NPLS------------PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAA---V 219 (351)
T ss_dssp CC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCC---H
T ss_pred CC-------------CCCC------------hhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhh---H
Confidence 21 1111 234456677777766555568999999999999987654211100 1
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
...++..+..|....++++++...++|+|||+|++++.++..... ..+++||++++ .++++.|+++.+.+.+|..
T Consensus 220 ~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 294 (351)
T 3ruf_A 220 IPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS---AKDNIYNVAVG--DRTTLNELSGYIYDELNLI 294 (351)
T ss_dssp HHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEEESCS--CCEEHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc---cCCCEEEeCCC--CcccHHHHHHHHHHHhCcc
Confidence 111122222344334557888899999999999999988765211 13589999998 7999999999999999985
Q ss_pred CC
Q 042694 422 PC 423 (554)
Q Consensus 422 p~ 423 (554)
+.
T Consensus 295 ~~ 296 (351)
T 3ruf_A 295 HH 296 (351)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 3
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=99.97 E-value=3.3e-30 Score=263.90 Aligned_cols=263 Identities=20% Similarity=0.183 Sum_probs=185.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|||||||||||++|+++|++.++.+ +|++++............. .....++.++.||+.++ +.+.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~------~~~~ 91 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNLNNVKS---IQDHPNYYFVKGEIQNG------ELLE 91 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCGGGGTT---TTTCTTEEEEECCTTCH------HHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccchhhhhh---hccCCCeEEEEcCCCCH------HHHH
Confidence 467899999999999999999999998776 6776653211100001100 01135899999999987 8888
Q ss_pred HHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 188 VIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 188 ~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
.++++ +|+|||+||..... +.+...+++|+.||.+++++|++. ++++|||+||.++|+... ...++++.++
T Consensus 92 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~---~~~~~~E~~~ 167 (346)
T 4egb_A 92 HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLG---KTGRFTEETP 167 (346)
T ss_dssp HHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCC---SSCCBCTTSC
T ss_pred HHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCC---cCCCcCCCCC
Confidence 88876 99999999987654 567788999999999999999995 889999999999998742 1223333222
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
. .+.. .|..+|..+|.++..+....|++++|+||+.|||+...+. .++
T Consensus 168 ~-------------~p~~------------~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~------ 215 (346)
T 4egb_A 168 L-------------APNS------------PYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLI------ 215 (346)
T ss_dssp C-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHH------
T ss_pred C-------------CCCC------------hhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chH------
Confidence 1 1111 2334466677776665555699999999999999766321 111
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
..++..+..|....++++++...++|+|||+|++++.++.... .+++||++++ +++++.|+++.+.+.+|..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 216 PLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-----VGEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp HHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-----TTCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-----CCCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 1111222233322345778888999999999999999887643 3579999998 78999999999999999864
Q ss_pred C
Q 042694 423 C 423 (554)
Q Consensus 423 ~ 423 (554)
.
T Consensus 289 ~ 289 (346)
T 4egb_A 289 K 289 (346)
T ss_dssp G
T ss_pred c
Confidence 3
No 4
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.8e-30 Score=276.00 Aligned_cols=286 Identities=22% Similarity=0.286 Sum_probs=197.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCc-cEEEEEcch-----hHHHHHHHcCCc-------hhhhccCcEEEEEccC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDV-GKIFIINAE-----LFKCLKQTYGKS-------YQAFMLSKLVPAVGNV 174 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V-~~i~~~~~~-----~~~~l~~~~~~~-------~~~~~~~kv~~v~GDl 174 (554)
.++|+|||||||||||++|+++|++..+ + .+|+++.+. ...++.+..... +......++.++.||+
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 5689999999999999999999999833 2 377777532 223333333221 1122346899999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeec
Q 042694 175 CENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 175 ~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
+++.+|++.+.++.+.+++|+|||+||.+++ .+++..+++|+.||.+++++|++ .++++|||+||.++++... .
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~-~~~~~~V~iSS~~v~~~~~----~ 223 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADVGAAIE----P 223 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTS-SSCCCEEEEEEGGGGTTSC----T
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeehhhcCccC----C
Confidence 9999999999999999999999999999988 77888899999999999999998 4889999999999987632 2
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC----
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE---- 330 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~---- 330 (554)
.++.+..+..+.... ...+. .....|..+|+.+|.++..+....|++++|+||+.|||+...
T Consensus 224 ~~~~E~~~~~p~~~~-------~~~~~-------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~ 289 (478)
T 4dqv_A 224 SAFTEDADIRVISPT-------RTVDG-------GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQL 289 (478)
T ss_dssp TTCCSSSCHHHHCCE-------EECCT-------TSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCC
T ss_pred CCcCCcccccccCcc-------ccccc-------ccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcC
Confidence 233333221111100 00000 000135666788888777666545899999999999997541
Q ss_pred CccccccCCCCccceeeeeccceeeee-ecC------CCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGF-LVD------PNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN 403 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~-~~~------~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~ 403 (554)
...+|+.. .+......|..+.. +++ .+..++++||||||++++.++..........+++||++++..+
T Consensus 290 ~~~~~~~~-----l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~ 364 (478)
T 4dqv_A 290 NMSDWVTR-----MVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDD 364 (478)
T ss_dssp CTTBHHHH-----HHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCS
T ss_pred CHHHHHHH-----HHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCC
Confidence 12233221 01111123444322 111 2577899999999999999887522112234689999998434
Q ss_pred cccHHHHHHHHHhHhcc
Q 042694 404 PLVFQDLARLLHEHYSA 420 (554)
Q Consensus 404 ~it~~e~~~~~~~~~~~ 420 (554)
+++|.|+++.+.+. +.
T Consensus 365 ~~s~~el~~~l~~~-g~ 380 (478)
T 4dqv_A 365 GIGLDEYVDWLIEA-GY 380 (478)
T ss_dssp SCSHHHHHHHHHHT-TC
T ss_pred CcCHHHHHHHHHHc-CC
Confidence 49999999999986 43
No 5
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=99.96 E-value=2e-29 Score=254.38 Aligned_cols=246 Identities=13% Similarity=0.088 Sum_probs=182.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|+++|+++++ +|+++.+.. ... . ..++.++.+|+. + +.+..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~-~~~---------~--~~~~~~~~~Dl~-~------~~~~~~ 59 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN---TPIILTRSI-GNK---------A--INDYEYRVSDYT-L------EDLINQ 59 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCC-C----------------CCEEEECCCC-H------HHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCC-Ccc---------c--CCceEEEEcccc-H------HHHHHh
Confidence 47899999999999999999999876 566655421 000 0 126788999999 8 889999
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
++++|+|||+||..... ++...+++|+.||.+++++|++. ++++|||+||.++|+... ..++.+.++.
T Consensus 60 ~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~----~~~~~E~~~~------ 127 (311)
T 3m2p_A 60 LNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDET----SLPWNEKELP------ 127 (311)
T ss_dssp TTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGG----GCSBCTTSCC------
T ss_pred hcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCC----CCCCCCCCCC------
Confidence 99999999999987765 56678899999999999999984 799999999999998643 1223322221
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
.+.+ .|..+|+.+|.++..+..+.|++++|+||+.|||+...+. +++ ..++..+
T Consensus 128 -------~p~~------------~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~------~~~~~~~ 181 (311)
T 3m2p_A 128 -------LPDL------------MYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMI------NRFFRQA 181 (311)
T ss_dssp -------CCSS------------HHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHH------HHHHHHH
T ss_pred -------CCCc------------hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHH------HHHHHHH
Confidence 1111 2344566777777766665799999999999999876431 111 1112222
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
..|....++++++...++++|+|+|++++.++.... .+++||++++ .++++.|+++.+.+.+|..+
T Consensus 182 ~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-----~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 182 FHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-----VSGTFNIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp HTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-----CCEEEEECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred HcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-----CCCeEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 234444455778888999999999999998876532 3589999998 79999999999999999764
No 6
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=99.96 E-value=1.1e-28 Score=252.56 Aligned_cols=258 Identities=14% Similarity=0.129 Sum_probs=180.1
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
..++|+|||||||||||++|+++|++.|++| +++++.. ...++.++.+|+.++ +.+
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V---~~~~r~~---------------~~~~~~~~~~Dl~d~------~~~ 71 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTV---RGFDLRP---------------SGTGGEEVVGSLEDG------QAL 71 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCE---EEEESSC---------------CSSCCSEEESCTTCH------HHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEE---EEEeCCC---------------CCCCccEEecCcCCH------HHH
Confidence 3578899999999999999999999988754 4444321 014677899999987 888
Q ss_pred HHHhcCccEEEEcCCCCCchh-hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 187 DVIAKEVDVIVNSAANTTFDE-RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~-~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
..+++++|+|||+||...... ..+..+++|+.||.+++++|++ .++++|||+||.+||+.... ...++.+..+.
T Consensus 72 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS~~vyg~~~~--~~~~~~E~~~~-- 146 (347)
T 4id9_A 72 SDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASSGEVYPENRP--EFLPVTEDHPL-- 146 (347)
T ss_dssp HHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGGTTTTSC--SSSSBCTTSCC--
T ss_pred HHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHHHhCCCCC--CCCCcCCCCCC--
Confidence 889999999999999877643 4588999999999999999998 48999999999999987311 12222222211
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee-------------ecccCCc
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE-------------STCKEPF 332 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~-------------g~~~~p~ 332 (554)
.+.. .|..+|..+|.+++.+....+++++|+||+.|| |+...+.
T Consensus 147 -----------~~~~------------~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~ 203 (347)
T 4id9_A 147 -----------CPNS------------PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLR 203 (347)
T ss_dssp -----------CCCS------------HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHH
T ss_pred -----------CCCC------------hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccc
Confidence 1111 234456677777776666679999999999999 6543211
Q ss_pred ccccc----CCCCccceeeeeccceeeeeecCCCccccc----chhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCc
Q 042694 333 SGWME----GNRMMDPIILYYGKGQLTGFLVDPNGILDV----VPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNP 404 (554)
Q Consensus 333 ~g~~~----~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~----vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~ 404 (554)
..+.+ .......++.....|....++++++...++ ++|+|+|++++.++..... .+++||++++ .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~----~~~~~ni~~~--~~ 277 (347)
T 4id9_A 204 PRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA----AGGTFNLGAD--EP 277 (347)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG----TTEEEEESCS--SC
T ss_pred cccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc----CCCeEEECCC--Cc
Confidence 00000 000011111112233322344667777888 9999999999999876532 2589999998 79
Q ss_pred ccHHHHHHHHHhHhccCC
Q 042694 405 LVFQDLARLLHEHYSASP 422 (554)
Q Consensus 405 it~~e~~~~~~~~~~~~p 422 (554)
+++.|+++.+.+.+|..+
T Consensus 278 ~s~~e~~~~i~~~~g~~~ 295 (347)
T 4id9_A 278 ADFAALLPKIAALTGLPI 295 (347)
T ss_dssp EEHHHHHHHHHHHHCCCE
T ss_pred ccHHHHHHHHHHHhCCCC
Confidence 999999999999998753
No 7
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.7e-28 Score=253.80 Aligned_cols=271 Identities=17% Similarity=0.157 Sum_probs=186.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCC-CCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVC-ENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~-~~~lGLs~~~ 185 (554)
.++|+|||||||||||++|+++|+++ ++ +|+++++.. ..+ . ......++.++.||++ ++ +.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~-~~~----~---~~~~~~~v~~~~~Dl~~d~------~~ 84 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDW---EVFGMDMQT-DRL----G---DLVKHERMHFFEGDITINK------EW 84 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSC---EEEEEESCC-TTT----G---GGGGSTTEEEEECCTTTCH------HH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCC---EEEEEeCCh-hhh----h---hhccCCCeEEEeCccCCCH------HH
Confidence 46789999999999999999999998 65 556655321 000 0 0012368999999999 65 88
Q ss_pred HHHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
+..+++++|+|||+||..... .++...+++|+.||.+++++|++. + ++|||+||.++|+...+ .++.+.+.
T Consensus 85 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~----~~~~e~~~ 158 (372)
T 3slg_A 85 VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCAD----EQFDPDAS 158 (372)
T ss_dssp HHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCC----SSBCTTTC
T ss_pred HHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCC----CCCCcccc
Confidence 888888999999999987753 356788999999999999999986 5 89999999999987431 22222221
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC-C
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR-M 341 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~-~ 341 (554)
..+.. +.... .. .|..+|..+|.++...... |++++|+||+.|||+...+..++..... .
T Consensus 159 ~~~~~---------p~~~p---~~------~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~ 219 (372)
T 3slg_A 159 ALTYG---------PINKP---RW------IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRV 219 (372)
T ss_dssp CEEEC---------CTTCT---TH------HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHH
T ss_pred ccccC---------CCCCC---CC------cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchH
Confidence 10000 00000 01 2334456677776665555 9999999999999987654222111100 1
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
...++..+..|....++++++...++++|+|+|++++.++..... ...+++||++++. +++|+.|+++.+.+.+|..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~ni~~~~-~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 220 VTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG--VATGKIYNIGNPN-NNFSVRELANKMLELAAEF 296 (372)
T ss_dssp HHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCTT-CEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC--cCCCceEEeCCCC-CCccHHHHHHHHHHHhCCC
Confidence 111122222344334556778889999999999999998876431 1235899999931 6999999999999999976
Q ss_pred CC
Q 042694 422 PC 423 (554)
Q Consensus 422 p~ 423 (554)
+.
T Consensus 297 ~~ 298 (372)
T 3slg_A 297 PE 298 (372)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 8
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=99.96 E-value=6e-29 Score=250.65 Aligned_cols=253 Identities=8% Similarity=0.022 Sum_probs=177.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|||||||||||++|+++|++.++.- . .....+..+.+|++++ +.+.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~------------------~-----~~~~~~~~~~~D~~d~------~~~~ 54 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAGLP------------------G-----EDWVFVSSKDADLTDT------AQTR 54 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTCCT------------------T-----CEEEECCTTTCCTTSH------HHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCCcc------------------c-----ccccccCceecccCCH------HHHH
Confidence 468899999999999999999999977510 0 0112344567899887 7788
Q ss_pred HHhcC--ccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeeccccCCC
Q 042694 188 VIAKE--VDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMG 260 (554)
Q Consensus 188 ~l~~~--vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~ 260 (554)
.++++ +|+|||+||.+.. .+++...+++|+.||.+++++|++. ++++|||+||.++|+...+ .++|......
T Consensus 55 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~ 133 (319)
T 4b8w_A 55 ALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDKTTYPIDETMIHNG 133 (319)
T ss_dssp HHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSSCCSSBCGGGGGBS
T ss_pred HHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCCCCCCccccccccC
Confidence 88775 9999999998762 3467788999999999999999985 7999999999999986431 2222210000
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccc---ccc
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSG---WME 337 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g---~~~ 337 (554)
+ ..+.. . .|..+|+.+|.+++.+.+..+++++|+||+.|||+...+... ++.
T Consensus 134 -~-------------~~p~~-----~------~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~ 188 (319)
T 4b8w_A 134 -P-------------PHNSN-----F------GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 188 (319)
T ss_dssp -C-------------CCSSS-----H------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHH
T ss_pred -C-------------CCCCc-----c------hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccH
Confidence 0 00100 0 133446667777666555568999999999999987643211 111
Q ss_pred CCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 338 GNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 338 ~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
. ....++.....|....++++++...++++|||+|++++.++..... ..+.+||++++ .++++.|+++.+.+.
T Consensus 189 ~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~~~i~~~ 261 (319)
T 4b8w_A 189 G--LIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE---VEPIILSVGEE--DEVSIKEAAEAVVEA 261 (319)
T ss_dssp H--HHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC---SSCEEECCCGG--GCEEHHHHHHHHHHH
T ss_pred H--HHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc---CCceEEEecCC--CceeHHHHHHHHHHH
Confidence 0 0011110122343334557788889999999999999998876332 23579999998 799999999999999
Q ss_pred hccCC
Q 042694 418 YSASP 422 (554)
Q Consensus 418 ~~~~p 422 (554)
+|..+
T Consensus 262 ~g~~~ 266 (319)
T 4b8w_A 262 MDFHG 266 (319)
T ss_dssp TTCCS
T ss_pred hCCCC
Confidence 98653
No 9
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.95 E-value=8e-28 Score=245.61 Aligned_cols=263 Identities=12% Similarity=0.084 Sum_probs=180.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch------hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
.+|+|||||||||||++|+++|++.|. +|+++++. ..+.+... ...++.++.+|++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~d~----- 67 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY---DVVIADNLVNSKREAIARIEKI--------TGKTPAFHETDVSDE----- 67 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSSCTHHHHHHHHH--------HSCCCEEECCCTTCH-----
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC---cEEEEecCCcchHHHHHHHHhh--------cCCCceEEEeecCCH-----
Confidence 467999999999999999999999886 45555421 11222211 234788999999987
Q ss_pred HHHHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeecccc
Q 042694 183 EDLADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPF 257 (554)
Q Consensus 183 ~~~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~ 257 (554)
+.+..+++ ++|+|||+||..... +...+.++.|+.||.+++++|++. +.++|||+||.++++... ..++
T Consensus 68 -~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~----~~~~ 141 (341)
T 3enk_A 68 -RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPE----RSPI 141 (341)
T ss_dssp -HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCS----SSSB
T ss_pred -HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCC----CCCC
Confidence 88888887 899999999987653 345688999999999999999984 789999999999997642 1222
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-CCCcEEEEccceeeecccCCccccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-GDIPVVIIRPSVIESTCKEPFSGWM 336 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-~glp~~I~Rp~~V~g~~~~p~~g~~ 336 (554)
.+..+. .+.. .|..+|..+|.++..+... .+++++++||+.|||+....+.|..
T Consensus 142 ~e~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~ 196 (341)
T 3enk_A 142 DETFPL-------------SATN------------PYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGED 196 (341)
T ss_dssp CTTSCC-------------BCSS------------HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCC
T ss_pred CCCCCC-------------CCCC------------hhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCC
Confidence 222211 1111 2334456666666654433 3599999999999998654333321
Q ss_pred cCC--CCccceeeeeccc--eeeeeec------CCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCccc
Q 042694 337 EGN--RMMDPIILYYGKG--QLTGFLV------DPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLV 406 (554)
Q Consensus 337 ~~~--~~~~~i~~~~~~G--~~~~~~~------~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it 406 (554)
... ....+.+.....| ....+.+ +++...+++||||+|++++.++..... ...+++||++++ ++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~ni~~~--~~~s 272 (341)
T 3enk_A 197 PAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALER--RDASLTVNLGTG--RGYS 272 (341)
T ss_dssp CSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHH--HTSCEEEEESCS--CCEE
T ss_pred cccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhc--CCcceEEEeCCC--Ccee
Confidence 110 0111111111111 1111223 678889999999999999998876311 112589999998 7999
Q ss_pred HHHHHHHHHhHhccCC
Q 042694 407 FQDLARLLHEHYSASP 422 (554)
Q Consensus 407 ~~e~~~~~~~~~~~~p 422 (554)
+.|+++.+.+.+|..+
T Consensus 273 ~~e~~~~i~~~~g~~~ 288 (341)
T 3enk_A 273 VLEVVRAFEKASGRAV 288 (341)
T ss_dssp HHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999998753
No 10
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=99.95 E-value=7.3e-28 Score=247.22 Aligned_cols=264 Identities=16% Similarity=0.135 Sum_probs=183.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch------hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++|+|||||||||||++|+++|++.+. +|+++++. ..+.+.+.... ....++.++.+|++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~---- 93 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGHQRNLDEVRSLVSE----KQWSNFKFIQGDIRNL---- 93 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHHHHSCH----HHHTTEEEEECCTTSH----
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCccchhhHHHHhhhccc----ccCCceEEEECCCCCH----
Confidence 5688999999999999999999999876 45555431 12222222110 0125789999999987
Q ss_pred CHHHHHHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccC
Q 042694 182 EEDLADVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 182 s~~~~~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
+.+..+++++|+|||+||..... +.+...+++|+.||.+++++|++. ++++|||+||.++++...+ .+++
T Consensus 94 --~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~----~~~~ 166 (352)
T 1sb8_A 94 --DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPG----LPKV 166 (352)
T ss_dssp --HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC----SSBC
T ss_pred --HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCC----CCCC
Confidence 88888889999999999987643 457788999999999999999984 7899999999999986431 1222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+.++. .+.. .|..+|..+|.++..+....|++++|+||+.|||+...+...+. .
T Consensus 167 E~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~ 220 (352)
T 1sb8_A 167 EDTIG-------------KPLS------------PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYA-A 220 (352)
T ss_dssp TTCCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTC-C
T ss_pred CCCCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchh-h
Confidence 22110 1111 23334566666665544445899999999999998654321110 0
Q ss_pred CCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 339 NRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
....++..+..|....++++++...++++|+|+|++++.++..... ..+++||++++ .++++.|+++.+.+.+
T Consensus 221 --~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 221 --VIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD---ARNQVYNIAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp --HHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc---CCCceEEeCCC--CCccHHHHHHHHHHHH
Confidence 0011111122333334457778889999999999999887764211 13589999998 7999999999999999
Q ss_pred ---ccCC
Q 042694 419 ---SASP 422 (554)
Q Consensus 419 ---~~~p 422 (554)
|..+
T Consensus 294 ~~~g~~~ 300 (352)
T 1sb8_A 294 AENGVSY 300 (352)
T ss_dssp HHTTCCC
T ss_pred HhcCCCC
Confidence 7643
No 11
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=99.95 E-value=6.4e-28 Score=248.65 Aligned_cols=258 Identities=15% Similarity=0.121 Sum_probs=178.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHh--hCCCccEEEEEcchhH-HHHH-HHc--CCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILR--TVPDVGKIFIINAELF-KCLK-QTY--GKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~--~~~~V~~i~~~~~~~~-~~l~-~~~--~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++|+|||||||||||++|+++|++ .+. +|+++++... .... ... ..........++.++.+|++++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---- 80 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA---KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP---- 80 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS---EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH----
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC---eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH----
Confidence 4678999999999999999999999 665 5565543111 0000 000 0111122334678999999988
Q ss_pred CHHHHHHH-hcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 182 EEDLADVI-AKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 182 s~~~~~~l-~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
+.++.+ ..++|+|||+||.+.. .++++..+++|+.||.+++++|++. +.+ |||+||+++|+...+ ++++
T Consensus 81 --~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~-----~~~E 151 (362)
T 3sxp_A 81 --LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKA-----PNVV 151 (362)
T ss_dssp --HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCS-----SBCT
T ss_pred --HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCC-----CCCC
Confidence 888888 7899999999998765 3578899999999999999999984 676 999999999987543 2222
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
.++. .+.. .|..+|..+|.++..+... ++++++||+.|||+...+...+. .
T Consensus 152 ~~~~-------------~p~~------------~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~-~- 202 (362)
T 3sxp_A 152 GKNE-------------SPEN------------VYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTA-S- 202 (362)
T ss_dssp TSCC-------------CCSS------------HHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGS-C-
T ss_pred CCCC-------------CCCC------------hhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcch-h-
Confidence 2211 1111 2333455556655544332 89999999999998764321110 0
Q ss_pred CCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 340 RMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
....++..+..|.....+++++...++++|+|+|++++.++.... .+ +||++++ .++++.|+++.+.+.++
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-----~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 203 -MVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-----SG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp -HHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-----CE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-----CC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 111112222234333444667788999999999999998875421 24 9999998 79999999999999999
No 12
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=99.95 E-value=2.2e-27 Score=241.79 Aligned_cols=256 Identities=19% Similarity=0.201 Sum_probs=177.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+|+|||||||||||++|+++|++.+++. +|+++++.. .+.+. . . ....++.++.+|++++ +.
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~----~-~--~~~~~~~~~~~Dl~d~------~~ 68 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNPANLK----D-L--EDDPRYTFVKGDVADY------EL 68 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGGT----T-T--TTCTTEEEEECCTTCH------HH
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCchhHHh----h-h--ccCCceEEEEcCCCCH------HH
Confidence 4689999999999999999999987443 666665321 11110 0 0 0134789999999987 88
Q ss_pred HHHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
+..++.++|+|||+||..... ++++..+++|+.||.+++++|.+.+..++|||+||.++|+... +.++++..+
T Consensus 69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~----~~~~~E~~~ 144 (336)
T 2hun_A 69 VKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL----KGSFTENDR 144 (336)
T ss_dssp HHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS----SSCBCTTBC
T ss_pred HHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC----CCCcCCCCC
Confidence 888889999999999987643 3567889999999999999999863347999999999988642 122222211
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
. ++.. .|..+|..+|.+++.+....|++++++||+.|||+...+ .+.+
T Consensus 145 ~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~-~~~~------ 192 (336)
T 2hun_A 145 L-------------MPSS------------PYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP-EKLI------ 192 (336)
T ss_dssp C-------------CCCS------------HHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT-TSHH------
T ss_pred C-------------CCCC------------ccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc-CchH------
Confidence 0 1111 233445666666665555568999999999999976532 1111
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
..++..+..|....++++++...++++++|+|++++.++.... .+++||++++ .++++.|+++.+.+.+|..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~~ 265 (336)
T 2hun_A 193 PKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-----SREIYNISAG--EEKTNLEVVKIILRLMGKGE 265 (336)
T ss_dssp HHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCS--CEECHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-----CCCEEEeCCC--CcccHHHHHHHHHHHhCCCc
Confidence 0111111122222234566777899999999999998876422 3579999998 78999999999999998753
No 13
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=99.95 E-value=6e-27 Score=237.97 Aligned_cols=260 Identities=13% Similarity=0.168 Sum_probs=178.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
||+|||||||||||++|+++|++.++ +|+++++.... . ......++.++.+|+.++ +.++.+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~-----~----~~~~~~~~~~~~~D~~~~------~~~~~~ 62 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGL---SVVVVDNLQTG-----H----EDAITEGAKFYNGDLRDK------AFLRDV 62 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSC-----C----GGGSCTTSEEEECCTTCH------HHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCcC-----c----hhhcCCCcEEEECCCCCH------HHHHHH
Confidence 47899999999999999999999875 45555432100 0 001123688899999987 788888
Q ss_pred hc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 190 AK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
++ ++|+|||+||..... ++++..+++|+.||.+++++|++. ++++|||+||.++++... ..++++.++.
T Consensus 63 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~----~~~~~E~~~~- 136 (330)
T 2c20_A 63 FTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVD----VDLITEETMT- 136 (330)
T ss_dssp HHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCS----SSSBCTTSCC-
T ss_pred HhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCC----CCCCCcCCCC-
Confidence 77 899999999987653 467788999999999999999984 789999999999988642 1222222211
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC-CCCcc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG-NRMMD 343 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~-~~~~~ 343 (554)
.+.. .|..+|..+|.++..+....|++++|+||+.|||+......|..+. .....
T Consensus 137 ------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~ 192 (330)
T 2c20_A 137 ------------NPTN------------TYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLI 192 (330)
T ss_dssp ------------CCSS------------HHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHH
T ss_pred ------------CCCC------------hHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchH
Confidence 1111 2334456666666655555689999999999999864322221110 00111
Q ss_pred ceeee--eccceeeeeec------CCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 344 PIILY--YGKGQLTGFLV------DPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 344 ~i~~~--~~~G~~~~~~~------~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
+.+.. .+.+....+++ +++...++|+|||+|++++.++...... ..+++||++++ .++++.|+++.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~ 268 (330)
T 2c20_A 193 PLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG--GESDFYNLGNG--NGFSVKEIVDAVR 268 (330)
T ss_dssp HHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT--CCCEEEECCCT--TCBCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC--CCCCeEEeCCC--CCccHHHHHHHHH
Confidence 11111 11121112222 5677899999999999999988754321 12579999988 7899999999999
Q ss_pred hHhccC
Q 042694 416 EHYSAS 421 (554)
Q Consensus 416 ~~~~~~ 421 (554)
+.+|..
T Consensus 269 ~~~g~~ 274 (330)
T 2c20_A 269 EVTNHE 274 (330)
T ss_dssp HHTTSC
T ss_pred HHhCCC
Confidence 998865
No 14
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=99.95 E-value=1.4e-27 Score=245.58 Aligned_cols=266 Identities=12% Similarity=0.103 Sum_probs=178.3
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|||||||||||++|+++|++.++ +|+++++.. ...+..... ...++.++.+|++++ +
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~------~ 70 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPSLFETAR------VADGMQSEIGDIRDQ------N 70 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSSCHHHHTT------TTTTSEEEECCTTCH------H
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEeCCCcccchhhHhhc------cCCceEEEEccccCH------H
Confidence 35688999999999999999999999876 455554321 111111110 134788999999987 7
Q ss_pred HHHHHhcC--ccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 185 LADVIAKE--VDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 185 ~~~~l~~~--vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
.+..++++ +|+|||+||.... .+.+...+++|+.||.+++++|.+++++++|||+||.++|+...+ ..++.+
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~---~~~~~E 147 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW---IWGYRE 147 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS---SSCBCT
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc---CCCCCC
Confidence 78777775 8999999996543 345678899999999999999998645899999999999986431 112221
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc---------CCCcEEEEccceeeecccC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER---------GDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~---------~glp~~I~Rp~~V~g~~~~ 330 (554)
.++ ..+.. .|..+|..+|.+++..... .|++++++||+.|||+...
T Consensus 148 ~~~-------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~ 202 (357)
T 1rkx_A 148 NEA-------------MGGYD------------PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW 202 (357)
T ss_dssp TSC-------------BCCSS------------HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC
T ss_pred CCC-------------CCCCC------------ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCC
Confidence 111 01111 2333456666666554322 3899999999999997653
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHH
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDL 410 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~ 410 (554)
+..+++ ..++..+..|....+ .+++...+++||+|+|++++.++......+...+++||++++..+++++.|+
T Consensus 203 ~~~~~~------~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~ 275 (357)
T 1rkx_A 203 ALDRIV------PDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNI 275 (357)
T ss_dssp CSSCHH------HHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHH
T ss_pred ccccHH------HHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHH
Confidence 211111 111111222332222 3466788999999999999988764210001124799999742268999999
Q ss_pred HHHHHhHhccCC
Q 042694 411 ARLLHEHYSASP 422 (554)
Q Consensus 411 ~~~~~~~~~~~p 422 (554)
++.+.+.+|..+
T Consensus 276 ~~~i~~~~g~~~ 287 (357)
T 1rkx_A 276 VEQMVKYWGEGA 287 (357)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHhCCCC
Confidence 999999998653
No 15
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=99.95 E-value=4e-27 Score=246.17 Aligned_cols=276 Identities=11% Similarity=0.065 Sum_probs=175.3
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH-------------------HHHHHcCCchhhhccCc
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK-------------------CLKQTYGKSYQAFMLSK 166 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~-------------------~l~~~~~~~~~~~~~~k 166 (554)
.+.++++|||||||||||++|+++|++.|+ +|++++..... .+.... .....+
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~ 78 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK-----ALTGKS 78 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH-----HHHCCC
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCCC---eEEEEEecCccccccccccccccccchhhhhhhhHh-----hccCCc
Confidence 356889999999999999999999999876 55666432111 111100 112357
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcC--ccEEEEcCCCCCchh---h---HHHHHHHhchHHHHHHHHHHHcCCC-ceEE
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKE--VDVIVNSAANTTFDE---R---YDIAIDINTRGPCRLMEFAKQCNKL-KLFV 237 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~--vdiViH~AA~v~~~~---~---~~~~~~~Nv~gt~~ll~la~~~~~~-k~~v 237 (554)
+.++.||++++ +.+..++++ +|+|||+||...... + +...+++|+.||.+++++|++. +. ++||
T Consensus 79 v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V 151 (404)
T 1i24_A 79 IELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLV 151 (404)
T ss_dssp CEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred eEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEE
Confidence 88999999987 778887776 999999999876421 1 2357899999999999999985 55 6999
Q ss_pred EEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEE
Q 042694 238 QVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVV 317 (554)
Q Consensus 238 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~ 317 (554)
|+||.++|+.....++|..+++.+....+.. +.+..+.. .|..+|..+|.++..+....|++++
T Consensus 152 ~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~----~~~~~~~~------------~Y~~sK~~~e~~~~~~~~~~gi~~~ 215 (404)
T 1i24_A 152 KLGTMGEYGTPNIDIEEGYITITHNGRTDTL----PYPKQASS------------FYHLSKVHDSHNIAFTCKAWGIRAT 215 (404)
T ss_dssp EECCGGGGCCCSSCBCSSEEEEEETTEEEEE----ECCCCCCS------------HHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred EeCcHHHhCCCCCCCCccccccccccccccc----cCCCCCCC------------hhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9999999986433333332211100000000 00011111 2333455566665544444489999
Q ss_pred EEccceeeecccCC---ccccccCCC-------CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhccc
Q 042694 318 IIRPSVIESTCKEP---FSGWMEGNR-------MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMI 387 (554)
Q Consensus 318 I~Rp~~V~g~~~~p---~~g~~~~~~-------~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~ 387 (554)
++||+.|||+...+ .++++.... ....++..+..|....++++++...++|||+|+|++++.++......
T Consensus 216 ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~ 295 (404)
T 1i24_A 216 DLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKA 295 (404)
T ss_dssp EEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCT
T ss_pred EEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccC
Confidence 99999999987643 122222111 01111222223433335577788899999999999999988653211
Q ss_pred CCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 388 QKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 388 ~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
+ ..++||+++ .++++.|+++.+.+.
T Consensus 296 g--~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 296 G--EFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp T--CEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred C--CceEEEECC---CCCcHHHHHHHHHHH
Confidence 1 127999987 379999999999997
No 16
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=99.95 E-value=3.8e-27 Score=238.50 Aligned_cols=253 Identities=11% Similarity=0.076 Sum_probs=175.6
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+.+.++|||||||||||++|+++|++.|+ +|+++++... .. . . ++.++.+|++++ +.
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~-------~~---~--l-~~~~~~~Dl~d~------~~ 65 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNV---EVFGTSRNNE-------AK---L--P-NVEMISLDIMDS------QR 65 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCTT-------CC---C--T-TEEEEECCTTCH------HH
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCc-------cc---c--c-eeeEEECCCCCH------HH
Confidence 346778999999999999999999999876 5555543210 00 0 1 688999999987 77
Q ss_pred HHHHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCC
Q 042694 186 ADVIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMG 260 (554)
Q Consensus 186 ~~~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~ 260 (554)
+..++++ +|+|||+||..... +.++..+++|+.||.+++++|.++++.++|||+||.++++.... ...++++.
T Consensus 66 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~--~~~~~~E~ 143 (321)
T 2pk3_A 66 VKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILP--EESPVSEE 143 (321)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCG--GGCSBCTT
T ss_pred HHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCC--CCCCCCCC
Confidence 8777765 99999999987643 35788999999999999999987646899999999999875310 11222222
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
++. ++.. .|..+|..+|.++.......|++++|+||+.|||+...+ .+++.
T Consensus 144 ~~~-------------~~~~------------~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~~~~~--- 194 (321)
T 2pk3_A 144 NQL-------------RPMS------------PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-GFVTQ--- 194 (321)
T ss_dssp SCC-------------BCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-TSHHH---
T ss_pred CCC-------------CCCC------------ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-CchHH---
Confidence 211 1111 233345666666655444458999999999999976542 11111
Q ss_pred Cccceeeeecc---c--eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 341 MMDPIILYYGK---G--QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 341 ~~~~i~~~~~~---G--~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
.++..+.. | ......++++...++++++|+|++++.++.... .+++||++++ .++++.|+++.+.
T Consensus 195 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~ 264 (321)
T 2pk3_A 195 ---DFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-----TGDVYNVCSG--IGTRIQDVLDLLL 264 (321)
T ss_dssp ---HHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-----TTCEEEESCS--CEEEHHHHHHHHH
T ss_pred ---HHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-----CCCeEEeCCC--CCeeHHHHHHHHH
Confidence 01111111 3 112234566778899999999999999887542 2479999998 7999999999999
Q ss_pred hHhccC
Q 042694 416 EHYSAS 421 (554)
Q Consensus 416 ~~~~~~ 421 (554)
+.+|..
T Consensus 265 ~~~g~~ 270 (321)
T 2pk3_A 265 AMANVK 270 (321)
T ss_dssp HHSSSC
T ss_pred HHhCCC
Confidence 998864
No 17
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=99.95 E-value=3.3e-27 Score=240.65 Aligned_cols=254 Identities=18% Similarity=0.213 Sum_probs=178.9
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCc--cEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT-VPDV--GKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~-~~~V--~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
|+|||||||||||++|+++|++. ++.+ .+|+++++.. .+.+.. . ....++.++.+|++++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~-~------~~~~~~~~~~~Dl~d~------ 67 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP-V------DADPRLRFVHGDIRDA------ 67 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG-G------TTCTTEEEEECCTTCH------
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh-c------ccCCCeEEEEcCCCCH------
Confidence 47999999999999999999995 3331 2667665321 011100 0 0125789999999987
Q ss_pred HHHHHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCC
Q 042694 184 DLADVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMG 260 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~ 260 (554)
+.+..++.++|+|||+||..... ++++..+++|+.||.+++++|.+. ++++|||+||.++|+... +.++++.
T Consensus 68 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~----~~~~~E~ 142 (337)
T 1r6d_A 68 GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSID----SGSWTES 142 (337)
T ss_dssp HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCS----SSCBCTT
T ss_pred HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCC----CCCCCCC
Confidence 88888889999999999987643 356788999999999999999985 789999999999988642 1222222
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
.+. .+.. .|..+|..+|.+++.+....|++++|+||+.|||+...+ .+++.
T Consensus 143 ~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~~~~~--- 193 (337)
T 1r6d_A 143 SPL-------------EPNS------------PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLIP--- 193 (337)
T ss_dssp SCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHHH---
T ss_pred CCC-------------CCCC------------chHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-CChHH---
Confidence 110 1111 233445666666665544458999999999999976532 11111
Q ss_pred CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 341 MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 341 ~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
.++.....|....++++++...++++++|+|++++.++.... .+++||++++ .++++.|+++.+.+.+|.
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 263 (337)
T 1r6d_A 194 ---LFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-----AGEIYHIGGG--LELTNRELTGILLDSLGA 263 (337)
T ss_dssp ---HHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCC--CEEEHHHHHHHHHHHHTC
T ss_pred ---HHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-----CCCEEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 111111123222334667778899999999999998876532 2579999998 789999999999999987
Q ss_pred C
Q 042694 421 S 421 (554)
Q Consensus 421 ~ 421 (554)
.
T Consensus 264 ~ 264 (337)
T 1r6d_A 264 D 264 (337)
T ss_dssp C
T ss_pred C
Confidence 5
No 18
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=99.95 E-value=2.7e-27 Score=238.65 Aligned_cols=251 Identities=16% Similarity=0.179 Sum_probs=172.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|++.++ +|+++++... ........++.++.+|+.++ + +....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~---------~~~~~~~~~~~~~~~Dl~d~------~-~~~~~ 61 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY---EVVVVDNLSS---------GRREFVNPSAELHVRDLKDY------S-WGAGI 61 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSS---------CCGGGSCTTSEEECCCTTST------T-TTTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCC---------CchhhcCCCceEEECccccH------H-HHhhc
Confidence 5799999999999999999999876 4555543210 00111245788999999988 4 44555
Q ss_pred cCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 191 KEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 191 ~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
++ |+|||+||.... .+.+...+++|+.||.+++++|++. ++++|||+||.++|+...+ .++++..+.
T Consensus 62 ~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~----~~~~e~~~~---- 131 (312)
T 3ko8_A 62 KG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADV----IPTPEEEPY---- 131 (312)
T ss_dssp CC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSS----SSBCTTSCC----
T ss_pred CC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCC----CCCCCCCCC----
Confidence 56 999999996532 3457788999999999999999984 7899999999999987431 222222111
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
.+.. .|..+|..+|.+++.+....|++++|+||+.|||+...+ +++. .++.
T Consensus 132 ---------~p~~------------~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~------~~~~ 182 (312)
T 3ko8_A 132 ---------KPIS------------VYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIY------DFIM 182 (312)
T ss_dssp ---------CCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHH------HHHH
T ss_pred ---------CCCC------------hHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHH------HHHH
Confidence 1111 233445666766665554458999999999999976532 2211 1111
Q ss_pred eeccc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 348 YYGKG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 348 ~~~~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
....+ ......++++...++++|+|+|++++.++..... ....+++||++++ .++++.|+++.+.+.+|..|
T Consensus 183 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 183 KLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE-MDAPFLALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp HHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH-SCCSEEEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred HHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc-cCCCCcEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 11111 1122346677889999999999999998876211 1123689999998 79999999999999999765
No 19
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=99.95 E-value=1.8e-27 Score=246.70 Aligned_cols=265 Identities=17% Similarity=0.140 Sum_probs=176.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|+|||||||||||++|+++|++.+ . +|+++++..... .+... ...++.++.+|++++ +.+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~-~~~l~------~~~~v~~~~~Dl~d~------~~l 93 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVN---QVHVVDNLLSAE-KINVP------DHPAVRFSETSITDD------ALL 93 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCS---EEEEECCCTTCC-GGGSC------CCTTEEEECSCTTCH------HHH
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCc---eEEEEECCCCCc-hhhcc------CCCceEEEECCCCCH------HHH
Confidence 568899999999999999999999987 4 566665421100 00000 135789999999987 888
Q ss_pred HHHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eee--ccccCCC
Q 042694 187 DVIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVM--EKPFCMG 260 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~--E~~~~~~ 260 (554)
..+++++|+|||+||..... +++...+++|+.||.+++++|++.+++++|||+||.++|+...+ .++ |.....
T Consensus 94 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~- 172 (377)
T 2q1s_A 94 ASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV- 172 (377)
T ss_dssp HHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCC-
T ss_pred HHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc-
Confidence 88889999999999987653 46778999999999999999987337899999999999986421 122 211000
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccc-cccC-
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSG-WMEG- 338 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g-~~~~- 338 (554)
+. ..+.. .|..+|..+|.++..+....|++++|+||+.|||+...+.+| |...
T Consensus 173 -~~------------~~~~~------------~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~ 227 (377)
T 2q1s_A 173 -SL------------HNNDS------------PYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTP 227 (377)
T ss_dssp -CS------------SCCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSG
T ss_pred -cc------------cCCCC------------chHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCc
Confidence 00 01111 233345666666665544458999999999999986622111 1100
Q ss_pred ----CCCccceeeeeccceeeeeecCCCcccccchhhHHHHH-HHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 339 ----NRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNA-TLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 339 ----~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~a-ii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
......++..+..|....++++++...++++|||+|++ ++.++.... .+ +||++++ +++++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-----~g-~~~i~~~--~~~s~~e~~~~ 299 (377)
T 2q1s_A 228 ATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-----GG-VYNIASG--KETSIADLATK 299 (377)
T ss_dssp GGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-----TE-EEECCCC--CCEEHHHHHHH
T ss_pred ccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-----CC-eEEecCC--CceeHHHHHHH
Confidence 00111111112233322344667788999999999999 888776421 34 9999998 79999999999
Q ss_pred HHhHhccCC
Q 042694 414 LHEHYSASP 422 (554)
Q Consensus 414 ~~~~~~~~p 422 (554)
+.+.+|..+
T Consensus 300 i~~~~g~~~ 308 (377)
T 2q1s_A 300 INEITGNNT 308 (377)
T ss_dssp HHHHHTCCS
T ss_pred HHHHhCCCC
Confidence 999998754
No 20
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=99.95 E-value=3.8e-27 Score=241.24 Aligned_cols=261 Identities=18% Similarity=0.214 Sum_probs=178.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|+++|++.++.. +|+++++.......+. .......++.++.+|++++ +.+..+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~------~~~~~~ 72 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNKAN----LEAILGDRVELVVGDIADA------ELVDKL 72 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGG----TGGGCSSSEEEEECCTTCH------HHHHHH
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCChhH----HhhhccCCeEEEECCCCCH------HHHHHH
Confidence 5789999999999999999999984332 5666653210000000 0111125789999999987 889999
Q ss_pred hcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccce--------eeccccC
Q 042694 190 AKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGK--------VMEKPFC 258 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~--------i~E~~~~ 258 (554)
++++|+|||+||..... ++++..+++|+.||.+++++|.+. +. +|||+||.++|+..... ..+.+++
T Consensus 73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~ 150 (348)
T 1oc2_A 73 AAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT 150 (348)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred hhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccccccccccccCCCcC
Confidence 99999999999987643 355788999999999999999985 56 99999999998864210 0001222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+.++ .++.. .|..+|..+|.++..+....|++++|+||+.|||+...+ .+++.
T Consensus 151 E~~~-------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-~~~~~- 203 (348)
T 1oc2_A 151 AETN-------------YNPSS------------PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-EKFIP- 203 (348)
T ss_dssp TTSC-------------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-TSHHH-
T ss_pred CCCC-------------CCCCC------------ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc-cchHH-
Confidence 1111 01111 233345666666665544458999999999999976532 11111
Q ss_pred CCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 339 NRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
.++..+..|....++++++...++++++|+|++++.++.... .+++||++++ .++++.|+++.+.+.+
T Consensus 204 -----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~~~ 271 (348)
T 1oc2_A 204 -----RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-----MGETYLIGAD--GEKNNKEVLELILEKM 271 (348)
T ss_dssp -----HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC-----TTCEEEECCS--CEEEHHHHHHHHHHHT
T ss_pred -----HHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCC-----CCCeEEeCCC--CCCCHHHHHHHHHHHh
Confidence 111111123222344667778899999999999998886432 3579999998 7999999999999999
Q ss_pred ccCC
Q 042694 419 SASP 422 (554)
Q Consensus 419 ~~~p 422 (554)
|..+
T Consensus 272 g~~~ 275 (348)
T 1oc2_A 272 GQPK 275 (348)
T ss_dssp TCCT
T ss_pred CCCc
Confidence 8754
No 21
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=99.94 E-value=4e-27 Score=237.56 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=174.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
||+|||||||||||++|+++|++.+ . .+.+.+... . .......++.++.+|+.+. ++..+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~--~v~~~~~~~--------~--~~~~~~~~~~~~~~Dl~~~-------~~~~~ 60 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-E--IVVIDNLSS--------G--NEEFVNEAARLVKADLAAD-------DIKDY 60 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-C--EEEECCCSS--------C--CGGGSCTTEEEECCCTTTS-------CCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-C--EEEEEcCCC--------C--ChhhcCCCcEEEECcCChH-------HHHHH
Confidence 4689999999999999999999987 3 233322110 0 0111245788999999853 34556
Q ss_pred hcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 190 AKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
++++|+|||+||.... .+.++..+++|+.||.+++++|++. ++++|||+||.++|+... ..++++..+.
T Consensus 61 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~----~~~~~E~~~~--- 132 (313)
T 3ehe_A 61 LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAK----VIPTPEDYPT--- 132 (313)
T ss_dssp HTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCS----SSSBCTTSCC---
T ss_pred hcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCC----CCCCCCCCCC---
Confidence 6799999999996533 3567889999999999999999984 789999999999998643 1222222111
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+.. .|..+|..+|.+++.+....|++++|+||+.|||+...+ +++.. ++
T Consensus 133 ----------~~~~------------~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~------~~ 182 (313)
T 3ehe_A 133 ----------HPIS------------LYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYD------FI 182 (313)
T ss_dssp ----------CCCS------------HHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHH------HH
T ss_pred ----------CCCC------------HHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHH------HH
Confidence 1111 233445666777666655569999999999999976542 22211 11
Q ss_pred eeeccc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 LYYGKG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
.....+ ......++++...++++|||+|++++.++.. . ..+++||++++ +++++.|+++.+.+.+|..|
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~----~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 183 MKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-D----ERVNIFNIGSE--DQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp HHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-C----SSEEEEECCCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred HHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-C----CCCceEEECCC--CCeeHHHHHHHHHHHhCCCC
Confidence 111112 1223457778889999999999999988762 1 23589999998 79999999999999999764
No 22
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=99.94 E-value=2.4e-26 Score=235.32 Aligned_cols=262 Identities=13% Similarity=0.139 Sum_probs=175.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc------------hhHHHHHHHcCCchhhhccCcEEEEEccCCCC
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA------------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCEN 177 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~------------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~ 177 (554)
+|+|||||||||||++|+++|++.+++| +++++ ...+.+... ...++.++.+|++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V---~~~~r~~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLP---VVIDNFHNAFRGGGSLPESLRRVQEL--------TGRSVEFEEMDILDQ 70 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCE---EEEECSSSSCBCSSSSBHHHHHHHHH--------HTCCCEEEECCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE---EEEecCCcccccccccHHHHHHHHhc--------cCCceEEEECCCCCH
Confidence 4789999999999999999999988654 44432 111222211 124688899999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee
Q 042694 178 NLGLEEDLADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 178 ~lGLs~~~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i 252 (554)
+.+..+++ ++|+|||+||..... +.++..+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 71 ------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~--- 140 (348)
T 1ek6_A 71 ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQ--- 140 (348)
T ss_dssp ------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCS---
T ss_pred ------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCC---
Confidence 77888877 899999999987642 456788999999999999999984 789999999999987632
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-CCCcEEEEccceeeecccCC
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-GDIPVVIIRPSVIESTCKEP 331 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-~glp~~I~Rp~~V~g~~~~p 331 (554)
..++++.++.. +... .|..+|..+|.++..+... .+++++|+||+.|||+....
T Consensus 141 -~~~~~E~~~~~------------p~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g 195 (348)
T 1ek6_A 141 -YLPLDEAHPTG------------GCTN------------PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG 195 (348)
T ss_dssp -SSSBCTTSCCC------------CCSS------------HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTS
T ss_pred -CCCcCCCCCCC------------CCCC------------chHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCccc
Confidence 12222222110 1011 2333456666666554433 24999999999999985422
Q ss_pred ccccccCC--CCccceeeee--ccceeeeeec------CCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCC
Q 042694 332 FSGWMEGN--RMMDPIILYY--GKGQLTGFLV------DPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSV 401 (554)
Q Consensus 332 ~~g~~~~~--~~~~~i~~~~--~~G~~~~~~~------~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~ 401 (554)
..|..... ....+.+... +.+....+++ +++...++|+|||+|++++.++..... ...+++||++++
T Consensus 196 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~g~~~~ni~~~- 272 (348)
T 1ek6_A 196 CIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE--QCGCRIYNLGTG- 272 (348)
T ss_dssp SCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT--TCCEEEEEECCS-
T ss_pred ccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc--cCCceEEEeCCC-
Confidence 22211100 0011111111 1222112223 456788999999999999998875421 111379999988
Q ss_pred CCcccHHHHHHHHHhHhccC
Q 042694 402 VNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 402 ~~~it~~e~~~~~~~~~~~~ 421 (554)
.++++.|+++.+.+.+|.+
T Consensus 273 -~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 273 -TGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp -CCEEHHHHHHHHHHHHCSC
T ss_pred -CCccHHHHHHHHHHHhCCC
Confidence 7899999999999999865
No 23
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=99.94 E-value=1.4e-26 Score=241.59 Aligned_cols=275 Identities=16% Similarity=0.139 Sum_probs=178.0
Q ss_pred CcEEEEecccccccHHHHHHHH-hhCCCccEEEEEcchh-----------HHHHHHHcCCchhhhccCc---EEEEEccC
Q 042694 110 AKNFFVTGATGFLAKVLIEKIL-RTVPDVGKIFIINAEL-----------FKCLKQTYGKSYQAFMLSK---LVPAVGNV 174 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL-~~~~~V~~i~~~~~~~-----------~~~l~~~~~~~~~~~~~~k---v~~v~GDl 174 (554)
+|+|||||||||||++|+++|+ +.++ +|+++++.. .+.+.+............+ +.++.+|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 78 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV 78 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC---EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCC
Confidence 4689999999999999999999 8775 556554321 2233211100000000123 88999999
Q ss_pred CCCCCCCCHHHHHHHhc--C-ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccc
Q 042694 175 CENNLGLEEDLADVIAK--E-VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 175 ~~~~lGLs~~~~~~l~~--~-vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~ 248 (554)
+++ +.+..+++ + +|+|||+||..... ++++..+++|+.||.+++++|++. ++++|||+||.++++..
T Consensus 79 ~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~ 151 (397)
T 1gy8_A 79 RNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNP 151 (397)
T ss_dssp TCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSC
T ss_pred CCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCC
Confidence 987 77777776 5 99999999987653 467789999999999999999984 78999999999998754
Q ss_pred cce-e--eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 249 RGK-V--MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~-i--~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
... . +..++++.++. .+.. .|..+|..+|.++..+....|++++|+||+.||
T Consensus 152 ~~~~~~~~~~~~~E~~~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~ 206 (397)
T 1gy8_A 152 TMGSVSTNAEPIDINAKK-------------SPES------------PYGESKLIAERMIRDCAEAYGIKGICLRYFNAC 206 (397)
T ss_dssp CC-----CCCCBCTTSCC-------------BCSS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CcccccccccCcCccCCC-------------CCCC------------chHHHHHHHHHHHHHHHHHHCCcEEEEecccee
Confidence 210 0 01122221110 1111 233445666666665544448999999999999
Q ss_pred ecccCCccccccC-CCCccceee-----eeccce------------eeeeec------CCCcccccchhhHHHHHHHHHH
Q 042694 326 STCKEPFSGWMEG-NRMMDPIIL-----YYGKGQ------------LTGFLV------DPNGILDVVPADMVVNATLAAI 381 (554)
Q Consensus 326 g~~~~p~~g~~~~-~~~~~~i~~-----~~~~G~------------~~~~~~------~~~~~~d~vpVD~va~aii~~~ 381 (554)
|+...+..|.... .....+.+. .+..|. ...+++ +++...++|||||||++++.++
T Consensus 207 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l 286 (397)
T 1gy8_A 207 GAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL 286 (397)
T ss_dssp CCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred CCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHH
Confidence 9865433222111 001111111 111121 112223 5677899999999999999988
Q ss_pred HHhcccC-CCCC---eEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 382 AQHGMIQ-KPDI---NVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 382 ~~~~~~~-~~~~---~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
......+ .... ++||++++ +++++.|+++.+.+.+|..
T Consensus 287 ~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 328 (397)
T 1gy8_A 287 DYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHP 328 (397)
T ss_dssp HHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCC
T ss_pred hcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 6533211 0013 79999988 7899999999999999864
No 24
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=99.94 E-value=1.1e-26 Score=240.83 Aligned_cols=260 Identities=13% Similarity=0.008 Sum_probs=179.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+|||||||||||++|+++|++.++ +|+++++.... .. .....++.++.+|++++ +.+..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~-----~~----~~~~~~v~~~~~Dl~d~------~~~~~ 89 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNE-----HM----TEDMFCDEFHLVDLRVM------ENCLK 89 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCS-----SS----CGGGTCSEEEECCTTSH------HHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC---eEEEEECCCcc-----ch----hhccCCceEEECCCCCH------HHHHH
Confidence 468999999999999999999999875 55655432100 00 01134788899999987 88888
Q ss_pred HhcCccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee-eccccCCCCCc
Q 042694 189 IAKEVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV-MEKPFCMGDSI 263 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i-~E~~~~~~~~~ 263 (554)
+++++|+|||+||.... .++++..+++|+.||.+++++|++. ++++|||+||.++++...+.. +..++++.+.
T Consensus 90 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~- 167 (379)
T 2c5a_A 90 VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDA- 167 (379)
T ss_dssp HHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG-
T ss_pred HhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccC-
Confidence 88999999999998764 3567889999999999999999984 789999999999988642100 0011111110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+..+.. .|..+|..+|.++..+....|++++|+||+.|||+...+..++.. ...
T Consensus 168 ----------~~~~~~~------------~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~---~~~ 222 (379)
T 2c5a_A 168 ----------WPAEPQD------------AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREK---APA 222 (379)
T ss_dssp ----------SSBCCSS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCC---HHH
T ss_pred ----------CCCCCCC------------hhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccccccc---HHH
Confidence 0001111 233345666666655544458999999999999986643222100 001
Q ss_pred ceeeeecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.++..+..|.. ..++++++...++++|+|+|++++.++... .+++||++++ +++++.|+++.+.+.+|..
T Consensus 223 ~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~------~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 223 AFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD------FREPVNIGSD--EMVSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp HHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS------CCSCEEECCC--CCEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc------CCCeEEeCCC--CccCHHHHHHHHHHHhCCC
Confidence 11111112211 123466777899999999999999987643 2468999998 7999999999999999865
No 25
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=99.94 E-value=8.2e-27 Score=238.52 Aligned_cols=270 Identities=16% Similarity=0.185 Sum_probs=176.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHH-HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFK-CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~-~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+|+|||||||||||++|+++|++.++ +|+++++ .... .+.... ...++.++.+|++++ +.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~l~-------~~~~~~~~~~Dl~d~------~~ 64 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKGATDNLHWLS-------SLGNFEFVHGDIRNK------ND 64 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTTHHHHHHHHH-------TTCCCEEEECCTTCH------HH
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCC---EEEEEeCCCccCchhhhhhhc-------cCCceEEEEcCCCCH------HH
Confidence 46899999999999999999999876 4555532 1111 111111 123688899999987 88
Q ss_pred HHHHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEEeeceecccccc-eeeccc--
Q 042694 186 ADVIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQVSTAYVNGQRRG-KVMEKP-- 256 (554)
Q Consensus 186 ~~~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~vST~~v~~~~~~-~i~E~~-- 256 (554)
++.++++ +|+|||+||..... ++++..+++|+.||.+++++|++. +.+ +|||+||.++|+...+ ...|..
T Consensus 65 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~e~~~~ 143 (347)
T 1orr_A 65 VTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETR 143 (347)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred HHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcCCccccccc
Confidence 8888877 99999999987652 467788999999999999999985 565 9999999999986421 111110
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc--cc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF--SG 334 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~--~g 334 (554)
+..... +....+..+ ..+. . .|..+|+.+|.++..+....|++++|+||+.|||+...+. .+
T Consensus 144 ~~~~~~--~~~~~e~~~--~~~~------~------~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~ 207 (347)
T 1orr_A 144 YTCVDK--PNGYDESTQ--LDFH------S------PYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQG 207 (347)
T ss_dssp EEETTC--TTCBCTTSC--CCCC------H------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBC
T ss_pred cccccc--ccCccccCC--CCCC------C------chHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCc
Confidence 000000 000000000 0111 1 2334456666666655444589999999999999865321 11
Q ss_pred cccCCCCccceeeeeccce-----eeeeecCCCcccccchhhHHHHHHHHHHHH-hcccCCCCCeEEEeeCCCCCcccHH
Q 042694 335 WMEGNRMMDPIILYYGKGQ-----LTGFLVDPNGILDVVPADMVVNATLAAIAQ-HGMIQKPDINVYQIASSVVNPLVFQ 408 (554)
Q Consensus 335 ~~~~~~~~~~i~~~~~~G~-----~~~~~~~~~~~~d~vpVD~va~aii~~~~~-~~~~~~~~~~vyn~~~~~~~~it~~ 408 (554)
++. .++.....|. ....+++++...++++++|+|++++.++.. ... .+++||++++..+++++.
T Consensus 208 ~~~------~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~----~g~~~~v~~~~~~~~s~~ 277 (347)
T 1orr_A 208 WVG------WFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKI----RGNAFNIGGTIVNSLSLL 277 (347)
T ss_dssp HHH------HHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHH----TTCEEEESSCGGGEEEHH
T ss_pred HHH------HHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccC----CCCEEEeCCCCCCCccHH
Confidence 111 1111111222 123346778889999999999999988764 122 247999998732369999
Q ss_pred HHHHHHHhHhccCC
Q 042694 409 DLARLLHEHYSASP 422 (554)
Q Consensus 409 e~~~~~~~~~~~~p 422 (554)
|+++.+.+.+|..+
T Consensus 278 e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 278 ELFKLLEDYCNIDM 291 (347)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999998753
No 26
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=99.94 E-value=1.5e-26 Score=236.37 Aligned_cols=269 Identities=15% Similarity=0.179 Sum_probs=178.5
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
|+|||||||||||++|+++|++. ++ +|+++++..- .+.. . ....++.++.||++++ ++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~-~~~~-~------~~~~~~~~~~~D~~~~-----~~~~~~~ 64 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSD-AISR-F------LNHPHFHFVEGDISIH-----SEWIEYH 64 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC---EEEEEESCCG-GGGG-G------TTCTTEEEEECCTTTC-----SHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC---EEEEEeCCcc-hHHH-h------hcCCCeEEEeccccCc-----HHHHHhh
Confidence 57999999999999999999987 54 5565543210 0000 0 0134789999999975 2567777
Q ss_pred hcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 190 AKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
.+++|+|||+||.... ..++...+++|+.|+.+++++|++. + ++|||+||.++++...+ .++.+.++..+.
T Consensus 65 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~----~~~~e~~~~~~~ 138 (345)
T 2bll_A 65 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD----KYFDEDHSNLIV 138 (345)
T ss_dssp HHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCC----SSBCTTTCCCBC
T ss_pred ccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCC----CCcCCccccccc
Confidence 7899999999998763 3467788999999999999999985 5 89999999999986421 122222110000
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC-CCCccce
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG-NRMMDPI 345 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~-~~~~~~i 345 (554)
.+.... .. .|..+|..+|.++..+....|++++|+||+.|||+...+...+... ......+
T Consensus 139 ---------~~~~~~---~~------~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~ 200 (345)
T 2bll_A 139 ---------GPVNKP---RW------IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQL 200 (345)
T ss_dssp ---------CCTTCG---GG------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHH
T ss_pred ---------CcccCc---cc------ccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHH
Confidence 000000 01 2333456666666555444589999999999999876432111100 0001111
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC-cccHHHHHHHHHhHhccCCC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN-PLVFQDLARLLHEHYSASPC 423 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~-~it~~e~~~~~~~~~~~~p~ 423 (554)
+..+..|....++++++...++++|+|+|++++.++..... ...+++||++++ . ++|+.|+++.+.+.+|..+.
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~~~ 275 (345)
T 2bll_A 201 ILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN--RCDGEIINIGNP--ENEASIEELGEMLLASFEKHPL 275 (345)
T ss_dssp HHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCT--TSEEEHHHHHHHHHHHHHTCTT
T ss_pred HHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccc--cCCCceEEeCCC--CCCCCHHHHHHHHHHHhCCCcc
Confidence 11122333333456677888999999999999998865321 123589999987 5 89999999999999987643
No 27
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1.6e-26 Score=235.89 Aligned_cols=248 Identities=16% Similarity=0.148 Sum_probs=166.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+|+|||||||||||++|+++|+++++ +|+++++..- .. ......++.++.+|+.++ +.+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~-~~--------~~l~~~~~~~~~~Dl~d~------~~~~~ 73 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSS-QI--------QRLAYLEPECRVAEMLDH------AGLER 73 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTS-CG--------GGGGGGCCEEEECCTTCH------HHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecChH-hh--------hhhccCCeEEEEecCCCH------HHHHH
Confidence 346899999999999999999999876 4555543210 00 001113688999999987 88888
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
+++++|+|||+||.... .++++..+++|+.|+.+++++|++. ++++|||+||.++++...+ .+.+ .+.++..|..
T Consensus 74 ~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~--~~~~-~E~~~~~p~~ 149 (342)
T 2x4g_A 74 ALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQ--GLPG-HEGLFYDSLP 149 (342)
T ss_dssp HTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTT--SSCB-CTTCCCSSCC
T ss_pred HHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCC--CCCC-CCCCCCCccc
Confidence 88999999999997654 3567788999999999999999985 7899999999999886432 0011 1111110000
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc-CC-ccccccCCCCccce
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK-EP-FSGWMEGNRMMDPI 345 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~-~p-~~g~~~~~~~~~~i 345 (554)
.... .|..+|+.+|.+++.+... |++++|+||+.|||+.. .+ ++.++
T Consensus 150 ---------~~~~------------~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~--------- 198 (342)
T 2x4g_A 150 ---------SGKS------------SYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVI--------- 198 (342)
T ss_dssp ---------TTSC------------HHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHH---------
T ss_pred ---------cccC------------hHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHH---------
Confidence 0011 2334456666666655445 89999999999999765 21 11111
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
..+..|....+ ++...++++++|+|++++.++..... +++||++++ + +++.|+++.+.+.+|..
T Consensus 199 -~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-----g~~~~v~~~--~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 199 -TAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-----GERYLLTGH--N-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp -HHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-----TCEEEECCE--E-EEHHHHHHHHHHHHTCC
T ss_pred -HHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-----CceEEEcCC--c-ccHHHHHHHHHHHhCCC
Confidence 11122322222 45668999999999999998875332 579999998 6 99999999999999864
No 28
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.94 E-value=6.4e-27 Score=238.29 Aligned_cols=255 Identities=15% Similarity=0.043 Sum_probs=176.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|||||||||||++|+++|++.++ +|+++++.. ..++.... ...++.++.+|++++ +
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~------~ 76 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDTRWRLRELG-------IEGDIQYEDGDMADA------C 76 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCCHHHHHTT-------CGGGEEEEECCTTCH------H
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCCccccccchhhcc-------ccCceEEEECCCCCH------H
Confidence 468999999999999999999999875 455554321 11221110 124788999999987 7
Q ss_pred HHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCC-ceEEEEeeceecccccceeeccccC
Q 042694 185 LADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKL-KLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~-k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
.+..+++ ++|+|||+||..... .++...+++|+.||.+++++|++. ++ ++|||+||.++|+...+ .+++
T Consensus 77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~----~~~~ 151 (335)
T 1rpn_A 77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQA----ERQD 151 (335)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSS----SSBC
T ss_pred HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCC----CCCC
Confidence 7777776 479999999987653 467788999999999999999985 65 89999999999986431 1222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+.++. .+.. .|..+|..+|.++..+....+++++|+||+.+||+...+ ++...
T Consensus 152 E~~~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~ 204 (335)
T 1rpn_A 152 ENTPF-------------YPRS------------PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI--EFVTR 204 (335)
T ss_dssp TTSCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHHH
T ss_pred cccCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC--CcchH
Confidence 22211 1111 233345666666665544458999999999999976431 11100
Q ss_pred CCCccceeeeecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 339 NRMMDPIILYYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
....++..+..|.. ....++++...++++|||+|++++.++.... .++||++++ .++++.|+++.+.+.
T Consensus 205 --~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~~ 274 (335)
T 1rpn_A 205 --KVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK------ADDYVVATG--VTTTVRDMCQIAFEH 274 (335)
T ss_dssp --HHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS------CCCEEECCS--CEEEHHHHHHHHHHT
T ss_pred --HHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC------CCEEEEeCC--CCccHHHHHHHHHHH
Confidence 01111111223322 2234677888999999999999999876422 369999998 789999999999999
Q ss_pred hccC
Q 042694 418 YSAS 421 (554)
Q Consensus 418 ~~~~ 421 (554)
+|..
T Consensus 275 ~g~~ 278 (335)
T 1rpn_A 275 VGLD 278 (335)
T ss_dssp TTCC
T ss_pred hCCC
Confidence 8864
No 29
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=99.94 E-value=7.7e-27 Score=246.02 Aligned_cols=262 Identities=17% Similarity=0.175 Sum_probs=169.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--h---hHHHHHHHcCCc----hhhhccCcEEEEEccCCC-CC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--E---LFKCLKQTYGKS----YQAFMLSKLVPAVGNVCE-NN 178 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~---~~~~l~~~~~~~----~~~~~~~kv~~v~GDl~~-~~ 178 (554)
.+++|||||||||||++|+++|++.+. +|+++.+ . ...++.+..... .......++.++.||+++ +.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEE---EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCC---EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 467999999999999999999987654 5666542 2 233443332111 112234689999999998 44
Q ss_pred CCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-ceeecccc
Q 042694 179 LGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-GKVMEKPF 257 (554)
Q Consensus 179 lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~~i~E~~~ 257 (554)
++ ...++|+|||+||.++...++...+++|+.||.+++++|.+ +.++|||+||.++ |... ....+.++
T Consensus 145 l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 145 VV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTF 213 (427)
T ss_dssp CC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEE
T ss_pred CC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccc
Confidence 44 55799999999999988888999999999999999999998 6789999999999 5421 01122233
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWME 337 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~ 337 (554)
++.+...+. .+.. .|..+|+.+|.++..+.+ .|++++|+|||.|+|+...+. +..
T Consensus 214 ~E~~~~~~~----------~~~~------------~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~--~~~ 268 (427)
T 4f6c_A 214 SEADVYKGQ----------LLTS------------PYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRW--HMR 268 (427)
T ss_dssp CTTCSCSSC----------CCCS------------HHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCC--CCT
T ss_pred cccccccCC----------CCCC------------chHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCc--ccc
Confidence 332221000 0111 344456777777666543 589999999999999876431 111
Q ss_pred CC--CCccceeeee-ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHH
Q 042694 338 GN--RMMDPIILYY-GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLL 414 (554)
Q Consensus 338 ~~--~~~~~i~~~~-~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~ 414 (554)
+. ..+..++... ..+.++. ++++...+++||||+|++++.++.... .+++||++++ ++++|.|+++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~v~DvA~ai~~~~~~~~-----~g~~~~l~~~--~~~s~~el~~~i 339 (427)
T 4f6c_A 269 NIKTNRFSMVMNDLLQLDCIGV--SMAEMPVDFSFVDTTARQIVALAQVNT-----PQIIYHVLSP--NKMPVKSLLECV 339 (427)
T ss_dssp TGGGCHHHHHHHHHHHSSEEEH--HHHTCEECCEEHHHHHHHHHHHTTSCC-----CCSEEEESCS--CCEEHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhcCCCCC--ccccceEEEeeHHHHHHHHHHHHcCCC-----CCCEEEecCC--CCCcHHHHHHHH
Confidence 10 0011111111 1222321 235778899999999999999876532 3589999998 799999999999
Q ss_pred HhHhc
Q 042694 415 HEHYS 419 (554)
Q Consensus 415 ~~~~~ 419 (554)
.+ ++
T Consensus 340 ~~-~g 343 (427)
T 4f6c_A 340 KR-KE 343 (427)
T ss_dssp HS-SC
T ss_pred HH-cC
Confidence 98 44
No 30
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=99.94 E-value=2.1e-26 Score=233.04 Aligned_cols=249 Identities=8% Similarity=0.075 Sum_probs=171.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|+++|++.++ +|+++.+. ..+|+.++ +.+..+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~---~v~~~~r~-----------------------~~~D~~d~------~~~~~~ 50 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTR-----------------------DELNLLDS------RAVHDF 50 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCT-----------------------TTCCTTCH------HHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEecC-----------------------ccCCccCH------HHHHHH
Confidence 57899999999999999999998775 34444432 03688876 778888
Q ss_pred hc--CccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-ceeeccccCCCCC
Q 042694 190 AK--EVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-GKVMEKPFCMGDS 262 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~~i~E~~~~~~~~ 262 (554)
++ ++|+|||+||.... ..++..++++|+.||.+++++|++. ++++|||+||.++|+... ..++|...... +
T Consensus 51 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~ 128 (321)
T 1e6u_A 51 FASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQG-T 128 (321)
T ss_dssp HHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSS-C
T ss_pred HHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCCCCCcCccccccC-C
Confidence 87 99999999998763 3467788999999999999999984 789999999999998642 12222211000 0
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
..+. .. .|..+|..+|.+++.+....+++++|+||+.|||+...+..... + ..
T Consensus 129 -------------~~p~-----~~------~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~-~--~~ 181 (321)
T 1e6u_A 129 -------------LEPT-----NE------PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNS-H--VI 181 (321)
T ss_dssp -------------CCGG-----GH------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCS-S--HH
T ss_pred -------------CCCC-----CC------ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCC-c--cH
Confidence 0000 01 23334566677666554445899999999999998764321100 0 11
Q ss_pred cceeeeec----cc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhccc----CCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 343 DPIILYYG----KG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMI----QKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 343 ~~i~~~~~----~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~----~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
..++..+. .| ....++++++...++|+|||+|++++.++...... ....+++||++++ .++++.|+++.
T Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~ 259 (321)
T 1e6u_A 182 PALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQT 259 (321)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCC--CCccHHHHHHH
Confidence 11111111 12 11223467788899999999999999988653321 0012479999988 78999999999
Q ss_pred HHhHhccC
Q 042694 414 LHEHYSAS 421 (554)
Q Consensus 414 ~~~~~~~~ 421 (554)
+.+.+|..
T Consensus 260 i~~~~g~~ 267 (321)
T 1e6u_A 260 IAKVVGYK 267 (321)
T ss_dssp HHHHHTCC
T ss_pred HHHHhCCC
Confidence 99999865
No 31
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=99.94 E-value=1.1e-26 Score=234.09 Aligned_cols=253 Identities=13% Similarity=0.106 Sum_probs=172.8
Q ss_pred CcEEEEecccccccHHHHHHHHhh--CCCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRT--VPDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~--~~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+|+|||||||||||++|+++|++. +++ |+++++.. -..+ ..++.++.+|++++ +.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~------------~~~~~~~~~D~~d~------~~~ 60 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN---VIASDIRKLNTDV------------VNSGPFEVVNALDF------NQI 60 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG---EEEEESCCCSCHH------------HHSSCEEECCTTCH------HHH
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE---EEEEcCCCccccc------------cCCCceEEecCCCH------HHH
Confidence 478999999999999999999998 654 44443211 0001 12456789999987 788
Q ss_pred HHHhc--CccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 187 DVIAK--EVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
..+++ ++|+|||+||.... ..++...+++|+.||.+++++|++. ++++|||+||.++++...+ ..+..+..+
T Consensus 61 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~e~~~ 136 (312)
T 2yy7_A 61 EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTP---KENTPQYTI 136 (312)
T ss_dssp HHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSC---SSSBCSSCB
T ss_pred HHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCC---CCCccccCc
Confidence 88877 89999999998654 2467788999999999999999984 7899999999999986421 011111111
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
..+.. .|..+|..+|.+++.+....|++++++||+.|||+...|-.+..+. ..
T Consensus 137 -------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~--~~ 189 (312)
T 2yy7_A 137 -------------MEPST------------VYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDY--AV 189 (312)
T ss_dssp -------------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTH--HH
T ss_pred -------------CCCCc------------hhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhh--HH
Confidence 01111 2334456667766655544589999999999999765432211000 00
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
..+......|... .+++++...++++|+|+|++++.++..... ....+++||+++ .++++.|+++.+.+.++
T Consensus 190 ~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~ni~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 190 DIFYKAIADKKYE-CFLSSETKMPMMYMDDAIDATINIMKAPVE-KIKIHSSYNLAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp HHHHHHHHTSEEE-ESSCTTCCEEEEEHHHHHHHHHHHHHSCGG-GCCCSSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred HHHHHHHcCCCeE-EecCCCceeeeeeHHHHHHHHHHHHhCccc-ccccCceEEeCC---CccCHHHHHHHHHHHCC
Confidence 1111112234332 345677789999999999999998865332 101137999985 48999999999999887
No 32
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=99.93 E-value=4.7e-26 Score=234.35 Aligned_cols=257 Identities=16% Similarity=0.192 Sum_probs=175.1
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
|+|||||||||||++|+++|++. +. +|+++++.. .+.+.+ . ....++.++.+|++++ +.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~-~------~~~~~~~~~~~Dl~d~------~~ 64 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNLESLSD-I------SESNRYNFEHADICDS------AE 64 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC---EEEEEECCCTTCCGGGGTT-T------TTCTTEEEEECCTTCH------HH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCC---eEEEEecCCCCCchhhhhh-h------hcCCCeEEEECCCCCH------HH
Confidence 46999999999999999999997 44 566654321 111100 0 0134789999999987 88
Q ss_pred HHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHc-CCCc-------eEEEEeeceecccccc--
Q 042694 186 ADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQC-NKLK-------LFVQVSTAYVNGQRRG-- 250 (554)
Q Consensus 186 ~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~-~~~k-------~~v~vST~~v~~~~~~-- 250 (554)
+..+++ ++|+|||+||..... ++++..+++|+.||.+++++|.+. .+++ +|||+||.++++....
T Consensus 65 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~ 144 (361)
T 1kew_A 65 ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD 144 (361)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred HHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc
Confidence 888887 899999999987642 456788999999999999999873 2566 9999999999886421
Q ss_pred eeecc----ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEK----PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
...+. ++++..+ .++.. .|..+|..+|.++..+....|++++++||+.|||
T Consensus 145 ~~~~~~~~~~~~E~~~-------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G 199 (361)
T 1kew_A 145 EVENSVTLPLFTETTA-------------YAPSS------------PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYG 199 (361)
T ss_dssp GSCTTSCCCCBCTTSC-------------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEES
T ss_pred cccccccCCCCCCCCC-------------CCCCC------------ccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeEC
Confidence 00000 1111111 01111 2333455666666554444589999999999999
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCccc
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLV 406 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it 406 (554)
+...+ .+++. .++..+..|....++++++...++++++|+|++++.++.... .+++||++++ .+++
T Consensus 200 ~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~v~~~--~~~s 265 (361)
T 1kew_A 200 PYHFP-EKLIP------LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-----AGETYNIGGH--NEKK 265 (361)
T ss_dssp TTCCT-TSHHH------HHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCC--CEEE
T ss_pred CCCCc-ccHHH------HHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC-----CCCEEEecCC--Ceee
Confidence 76532 11111 111111122222234667778899999999999999886532 3579999998 7899
Q ss_pred HHHHHHHHHhHhccCC
Q 042694 407 FQDLARLLHEHYSASP 422 (554)
Q Consensus 407 ~~e~~~~~~~~~~~~p 422 (554)
+.|+++.+.+.+|..+
T Consensus 266 ~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 266 NLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCcC
Confidence 9999999999998753
No 33
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=99.93 E-value=5e-26 Score=233.98 Aligned_cols=253 Identities=14% Similarity=0.142 Sum_probs=171.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|+|||||||||||++|+++|++.+ .+ |+++++..... ... ...++. +.+|+.++ +.+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~---~~~------~~~~~~-~~~d~~~~------~~~ 104 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGT---KFV------NLVDLN-IADYMDKE------DFL 104 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGG---GGG------GTTTSC-CSEEEEHH------HHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcc---hhh------cccCce-EeeecCcH------HHH
Confidence 457899999999999999999999987 54 44444321000 000 011222 67898876 777
Q ss_pred HHHhc-----CccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCC
Q 042694 187 DVIAK-----EVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMG 260 (554)
Q Consensus 187 ~~l~~-----~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~ 260 (554)
+.+.+ ++|+|||+||.... ..+++..+++|+.||.+++++|++. ++ +|||+||.++++...+ .++++.
T Consensus 105 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~~~----~~~~E~ 178 (357)
T 2x6t_A 105 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTS----DFIESR 178 (357)
T ss_dssp HHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSCSS----CCCSSG
T ss_pred HHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCCCC----CCcCCc
Confidence 77776 59999999998664 3567889999999999999999985 67 9999999999876421 112211
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
++. .+.. .|..+|..+|.+++.+....|++++++||+.|||+...+... ...
T Consensus 179 ~~~-------------~p~~------------~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~-~~~-- 230 (357)
T 2x6t_A 179 EYE-------------KPLN------------VFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS-MAS-- 230 (357)
T ss_dssp GGC-------------CCSS------------HHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGG-GSC--
T ss_pred CCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcc-cch--
Confidence 110 1111 233446667777766655568999999999999986542110 000
Q ss_pred CccceeeeeccceeeeeecCCCc-ccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 341 MMDPIILYYGKGQLTGFLVDPNG-ILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 341 ~~~~i~~~~~~G~~~~~~~~~~~-~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
....++..+..|....++++++. ..++++|+|+|++++.++.... +++||++++ .++++.|+++.+.+.+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g 302 (357)
T 2x6t_A 231 VAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHK 302 (357)
T ss_dssp HHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC------CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC------CCeEEecCC--CcccHHHHHHHHHHHcC
Confidence 11111111122332233456666 7899999999999999886532 479999998 78999999999999998
Q ss_pred cC
Q 042694 420 AS 421 (554)
Q Consensus 420 ~~ 421 (554)
..
T Consensus 303 ~~ 304 (357)
T 2x6t_A 303 KG 304 (357)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 34
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=99.93 E-value=3.5e-25 Score=225.75 Aligned_cols=261 Identities=15% Similarity=0.211 Sum_probs=170.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc------hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
|+|||||||||||++|+++|++.|++ |++++. ...+.+.+. ...++.++.+|++++ +
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~------~ 63 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERL--------GGKHPTFVEGDIRNE------A 63 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHH--------HTSCCEEEECCTTCH------H
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCCcchhHHHHHHhh--------cCCcceEEEccCCCH------H
Confidence 47999999999999999999998864 444432 111222111 123678899999987 7
Q ss_pred HHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 185 LADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
.++.+.+ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||.++++... ..++.+
T Consensus 64 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~----~~~~~e 138 (338)
T 1udb_A 64 LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNP----KIPYVE 138 (338)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCC----SSSBCT
T ss_pred HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCC----CCCcCc
Confidence 7777665 599999999986542 345678999999999999999884 788999999999987532 112222
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcC-CCcEEEEccceeeecccCCccccccC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERG-DIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~-glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
..+. .+... .|..+|..+|.++..+.... +++++|+||++|||+......|....
T Consensus 139 ~~~~------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~ 194 (338)
T 1udb_A 139 SFPT------------GTPQS------------PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQ 194 (338)
T ss_dssp TSCC------------CCCSS------------HHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCC
T ss_pred ccCC------------CCCCC------------hHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccc
Confidence 1110 01111 23334556666655544333 79999999999999754222221110
Q ss_pred C--CCccceeeee--ccce-eeee-----ecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHH
Q 042694 339 N--RMMDPIILYY--GKGQ-LTGF-----LVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQ 408 (554)
Q Consensus 339 ~--~~~~~i~~~~--~~G~-~~~~-----~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~ 408 (554)
. ....+.+... +.+. +..+ .++++...++|+|+|+|++++.++..... ...+++||++++ +++++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~--~~~~~~yni~~~--~~~s~~ 270 (338)
T 1udb_A 195 GIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN--KPGVHIYNLGAG--VGNSVL 270 (338)
T ss_dssp SSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT--CCEEEEEEESCS--CCEEHH
T ss_pred cchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhc--cCCCcEEEecCC--CceeHH
Confidence 0 0001111111 1111 1111 02456778999999999999988765321 111379999988 789999
Q ss_pred HHHHHHHhHhccC
Q 042694 409 DLARLLHEHYSAS 421 (554)
Q Consensus 409 e~~~~~~~~~~~~ 421 (554)
|+++.+.+.+|.+
T Consensus 271 e~~~~i~~~~g~~ 283 (338)
T 1udb_A 271 DVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998864
No 35
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=99.93 E-value=1.3e-25 Score=229.70 Aligned_cols=240 Identities=13% Similarity=0.150 Sum_probs=172.2
Q ss_pred ccchhhhccCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCC
Q 042694 101 GIGIVKFLKAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCEN 177 (554)
Q Consensus 101 ~~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~ 177 (554)
.+++.+++++|+|||||||||+|++|+++|++. ++ .+|+++++. ....+..... ..++.++.||++++
T Consensus 12 ~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~ 82 (344)
T 2gn4_A 12 MPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDL 82 (344)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCH
T ss_pred CccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCH
Confidence 455667788999999999999999999999998 65 255655442 2222332221 25789999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeec
Q 042694 178 NLGLEEDLADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 178 ~lGLs~~~~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
+.+..+++++|+|||+||.... ...+.+.+++|+.||.+++++|.+. ++++||++||..++.+
T Consensus 83 ------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~p------- 148 (344)
T 2gn4_A 83 ------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAANP------- 148 (344)
T ss_dssp ------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSSC-------
T ss_pred ------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCCC-------
Confidence 8888888999999999998763 2356789999999999999999985 7999999999644221
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh---cCCCcEEEEccceeeecccCC
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE---RGDIPVVIIRPSVIESTCKEP 331 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~---~~glp~~I~Rp~~V~g~~~~p 331 (554)
.+ .|..+|..+|.++..+.. ..|++++++|||.|+|+....
T Consensus 149 ------------------------~~------------~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~ 192 (344)
T 2gn4_A 149 ------------------------IN------------LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV 192 (344)
T ss_dssp ------------------------CS------------HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH
T ss_pred ------------------------cc------------HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH
Confidence 01 233345666666655442 258999999999999976433
Q ss_pred ccccccCCCCccceeeeeccce--eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHH
Q 042694 332 FSGWMEGNRMMDPIILYYGKGQ--LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQD 409 (554)
Q Consensus 332 ~~g~~~~~~~~~~i~~~~~~G~--~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e 409 (554)
++.+... ...|. ++ + .+++...++++++|+|++++.++.... .+++|+++++ ++++.|
T Consensus 193 i~~~~~~----------~~~g~~~~~-i-~~~~~~r~~i~v~D~a~~v~~~l~~~~-----~g~~~~~~~~---~~s~~e 252 (344)
T 2gn4_A 193 VPFFKKL----------VQNKASEIP-I-TDIRMTRFWITLDEGVSFVLKSLKRMH-----GGEIFVPKIP---SMKMTD 252 (344)
T ss_dssp HHHHHHH----------HHHTCCCEE-E-SCTTCEEEEECHHHHHHHHHHHHHHCC-----SSCEEEECCC---EEEHHH
T ss_pred HHHHHHH----------HHcCCCceE-E-eCCCeEEeeEEHHHHHHHHHHHHhhcc-----CCCEEecCCC---cEEHHH
Confidence 3322211 11232 22 2 356677889999999999999887532 2579998776 699999
Q ss_pred HHHHHHhHhc
Q 042694 410 LARLLHEHYS 419 (554)
Q Consensus 410 ~~~~~~~~~~ 419 (554)
+++.+.+..+
T Consensus 253 l~~~i~~~~~ 262 (344)
T 2gn4_A 253 LAKALAPNTP 262 (344)
T ss_dssp HHHHHCTTCC
T ss_pred HHHHHHHhCC
Confidence 9999986543
No 36
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=99.93 E-value=6.6e-27 Score=236.44 Aligned_cols=246 Identities=14% Similarity=0.112 Sum_probs=164.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+++|||||||||||++|+++|++.+++ |+++++..... ......... ....++.++.+|+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~------------ 68 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPP--MIPPEGTGKFLEKPVLELEERDLS------------ 68 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCC--SSCCTTSSEEECSCGGGCCHHHHT------------
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCccc--ccchhhhhhhccCCCeeEEeCccc------------
Confidence 4789999999999999999999998865 45544321000 000000000 01123334444443
Q ss_pred HHhcCccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 188 VIAKEVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
++|+|||+||..... ......++ |+.||.+++++|++. ++++|||+||.++|+...+ .++.+.++.
T Consensus 69 ----~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~----~~~~E~~~~- 137 (321)
T 3vps_A 69 ----DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADT----LPTPEDSPL- 137 (321)
T ss_dssp ----TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSS----SSBCTTSCC-
T ss_pred ----cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCC----CCCCCCCCC-
Confidence 799999999987642 23345566 999999999999985 6899999999999987421 223222221
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCC-cEEEEccceeeecccCCccccccCCCCcc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDI-PVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~gl-p~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+.. .|..+|+.+|.++..+....++ +++|+||+.|||+...+ ..++ .
T Consensus 138 ------------~p~~------------~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~------~ 186 (321)
T 3vps_A 138 ------------SPRS------------PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-DALV------P 186 (321)
T ss_dssp ------------CCCS------------HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHH------H
T ss_pred ------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-CChH------H
Confidence 1111 2344566777777766666789 99999999999977643 1111 1
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
.++..+..|....++++++...++++++|+|++++.++.... .+ +||++++ +++++.|+++.+. .+|..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-----~g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 187 RLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL-----PS-VVNFGSG--QSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp HHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC-----CS-EEEESCS--CCEEHHHHHHHHH-TTCTTC
T ss_pred HHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC-----CC-eEEecCC--CcccHHHHHHHHH-HhCCCC
Confidence 111122233333455778888999999999999998875432 24 9999998 7899999999999 888653
No 37
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=99.93 E-value=6.7e-26 Score=231.72 Aligned_cols=257 Identities=16% Similarity=0.129 Sum_probs=171.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|||||||||||++|+++|++.+. +|+++++..... ...... + ....++.++.+|+.++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~~-~--~~~~~~~~~~~D~~~~~--------- 88 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGR-KRNVEH-W--IGHENFELINHDVVEPL--------- 88 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC-GGGTGG-G--TTCTTEEEEECCTTSCC---------
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC---EEEEEeCCCccc-hhhhhh-h--ccCCceEEEeCccCChh---------
Confidence 4678999999999999999999999876 455554311000 000000 0 01357889999998873
Q ss_pred HHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-ceeeccccCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-GKVMEKPFCMGDSI 263 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~~i~E~~~~~~~~~ 263 (554)
..++|+|||+||.... ..++...+++|+.||.+++++|++. +. +|||+||.++++... ..++|..+.+..+
T Consensus 89 --~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~- 163 (343)
T 2b69_A 89 --YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNP- 163 (343)
T ss_dssp --CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCS-
T ss_pred --hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCCCCcccccccCCC-
Confidence 3579999999998764 2456788999999999999999985 55 899999999998642 1223322111000
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
..+. . .|..+|..+|.++..+....+++++|+||+.|||+...+..+. ...
T Consensus 164 ------------~~~~------~------~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~-----~~~ 214 (343)
T 2b69_A 164 ------------IGPR------A------CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR-----VVS 214 (343)
T ss_dssp ------------SSTT------H------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCC-----HHH
T ss_pred ------------CCCC------C------chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCccc-----HHH
Confidence 0111 1 2334456667766655444589999999999999865321110 001
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
.++..+..|....++++++...++++|+|+|++++.++... .+++||++++ .++++.|+++.+.+.+|..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 215 NFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN------VSSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp HHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS------CCSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC------CCCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 11111112322234567778899999999999998876532 1468999998 79999999999999998753
No 38
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=99.93 E-value=9.3e-26 Score=227.34 Aligned_cols=249 Identities=14% Similarity=0.123 Sum_probs=171.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|++.|+ +|+++++.... . ......++.++.+|++++ +.+..+.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~-------~--~~~~~~~~~~~~~Dl~~~------~~~~~~~ 62 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGL---EVAVLDNLATG-------K--RENVPKGVPFFRVDLRDK------EGVERAF 62 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEECCCSSC-------C--GGGSCTTCCEECCCTTCH------HHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCCcC-------c--hhhcccCeEEEECCCCCH------HHHHHHH
Confidence 4799999999999999999999876 45555431000 0 000124677899999987 7777777
Q ss_pred c--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec-eecccccceeeccccCCCCCcc
Q 042694 191 K--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA-YVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~-~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
+ ++|+|||+||..... +++...+++|+.||.+++++|++. ++++|||+||. ++++... ...++.+..+.
T Consensus 63 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~---~~~~~~E~~~~- 137 (311)
T 2p5y_A 63 REFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVP---EGERAEETWPP- 137 (311)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCC---TTCCBCTTSCC-
T ss_pred HhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCC---CCCCcCCCCCC-
Confidence 6 899999999987642 456788999999999999999984 78999999999 8887511 01122221110
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc--ccccCCCCc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS--GWMEGNRMM 342 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~--g~~~~~~~~ 342 (554)
.+.. .|..+|..+|.++..+....|++++++||+.|||+...+.. +.+.
T Consensus 138 ------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~----- 188 (311)
T 2p5y_A 138 ------------RPKS------------PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVA----- 188 (311)
T ss_dssp ------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHH-----
T ss_pred ------------CCCC------------hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHH-----
Confidence 1111 23334555666655544445899999999999998653211 1110
Q ss_pred cceeeeeccceeeeee-----cCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 343 DPIILYYGKGQLTGFL-----VDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~-----~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.++..+..|....+. ++++...++++++|+|++++.++... +++||++++ .++|+.|+++.+.+.
T Consensus 189 -~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-------~~~~~i~~~--~~~s~~e~~~~i~~~ 258 (311)
T 2p5y_A 189 -IFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL-------EGIYNVGTG--EGHTTREVLMAVAEA 258 (311)
T ss_dssp -HHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC-------CEEEEESCS--CCEEHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC-------CCEEEeCCC--CCccHHHHHHHHHHH
Confidence 011111123222233 56667789999999999999887652 479999998 799999999999999
Q ss_pred hccC
Q 042694 418 YSAS 421 (554)
Q Consensus 418 ~~~~ 421 (554)
+|..
T Consensus 259 ~g~~ 262 (311)
T 2p5y_A 259 AGKA 262 (311)
T ss_dssp HTCC
T ss_pred hCCC
Confidence 9864
No 39
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=99.93 E-value=6.7e-26 Score=227.96 Aligned_cols=248 Identities=13% Similarity=0.113 Sum_probs=159.1
Q ss_pred EEEEecccccccHHHHHHHHhhC-CCccEEEEEcchhHH-HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAELFK-CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~~~~-~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|||||||||||++|+++|++.+ +. |+++++.... ..... .++. +.+|+.++ +.++.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~~~----------~~~~-~~~d~~~~------~~~~~~ 60 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKFVNL----------VDLN-IADYMDKE------DFLIQI 60 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGGGHHH----------HTSC-CSEEEEHH------HHHHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCchhhhc----------Ccce-eccccccH------HHHHHH
Confidence 48999999999999999999987 54 4444432100 01000 1122 67898876 777887
Q ss_pred hcC-----ccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 190 AKE-----VDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 190 ~~~-----vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
.++ +|+|||+||.... ..+++..+++|+.|+.+++++|++. ++ +|||+||.++++...+ .++++.++.
T Consensus 61 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~----~~~~E~~~~ 134 (310)
T 1eq2_A 61 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTS----DFIESREYE 134 (310)
T ss_dssp HTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCS----CBCSSGGGC
T ss_pred HhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCC----CCCCCCCCC
Confidence 764 9999999998664 3467889999999999999999985 67 9999999999886431 112211110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+.. .|..+|..+|.++.......|++++++||+.|||+...+.... .. ...
T Consensus 135 -------------~p~~------------~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~-~~--~~~ 186 (310)
T 1eq2_A 135 -------------KPLN------------VYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSM-AS--VAF 186 (310)
T ss_dssp -------------CCSS------------HHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGG-SC--HHH
T ss_pred -------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCcc-ch--HHH
Confidence 1111 2334466677777666555689999999999999765321100 00 111
Q ss_pred ceeeeeccceeeeeecCCCc-ccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQLTGFLVDPNG-ILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~-~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.++..+..|....++++++. ..++++|+|+|++++.++.... +++||++++ .++++.|+++.+.+.+|..
T Consensus 187 ~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 187 HLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC------CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred HHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC------CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 11111122332233456667 8899999999999999886532 479999998 7899999999999998864
No 40
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=99.93 E-value=4.9e-26 Score=226.65 Aligned_cols=235 Identities=14% Similarity=0.056 Sum_probs=164.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+||||| +||||++|+++|++.+++| +++.+.. .. ...++.++.+|+.++ +.+..
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V---~~~~r~~--------~~-----~~~~~~~~~~Dl~d~------~~~~~ 58 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEV---TGLRRSA--------QP-----MPAGVQTLIADVTRP------DTLAS 58 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCE---EEEECTT--------SC-----CCTTCCEEECCTTCG------GGCTT
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEE---EEEeCCc--------cc-----cccCCceEEccCCCh------HHHHH
Confidence 357899999 5999999999999988754 4443321 00 235788899999987 66666
Q ss_pred HhcC-ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 189 IAKE-VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 189 l~~~-vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
+.++ +|+|||+||.. ....+...++|+.||.+++++|++ .++++|||+||.++|+...+ .++++..+.
T Consensus 59 ~~~~~~d~vih~a~~~--~~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS~~vyg~~~~----~~~~E~~~~---- 127 (286)
T 3gpi_A 59 IVHLRPEILVYCVAAS--EYSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSSTGVYGQEVE----EWLDEDTPP---- 127 (286)
T ss_dssp GGGGCCSEEEECHHHH--HHC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEEGGGCCCCCS----SEECTTSCC----
T ss_pred hhcCCCCEEEEeCCCC--CCCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEcccEEEcCCCC----CCCCCCCCC----
Confidence 7766 99999999863 345678889999999999999998 58899999999999987532 222222211
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
.+.. .|..+|..+|.. ... ++++|+||+.|||+... .++.....
T Consensus 128 ---------~p~~----------------~Y~~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~---~~~~~~~~------ 171 (286)
T 3gpi_A 128 ---------IAKD----------------FSGKRMLEAEAL-LAA-YSSTILRFSGIYGPGRL---RMIRQAQT------ 171 (286)
T ss_dssp ---------CCCS----------------HHHHHHHHHHHH-GGG-SSEEEEEECEEEBTTBC---HHHHHTTC------
T ss_pred ---------CCCC----------------hhhHHHHHHHHH-Hhc-CCeEEEecccccCCCch---hHHHHHHh------
Confidence 1111 123334444444 333 99999999999997653 22221111
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCCC
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPCV 424 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~~ 424 (554)
. ...++++...++++++|+|++++.++..... ...+++||++++ +++++.|+++.+.+.+|..+..
T Consensus 172 --~-----~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~ 237 (286)
T 3gpi_A 172 --P-----EQWPARNAWTNRIHRDDGAAFIAYLIQQRSH--AVPERLYIVTDN--QPLPVHDLLRWLADRQGIAYPA 237 (286)
T ss_dssp --G-----GGSCSSBCEECEEEHHHHHHHHHHHHHHHTT--SCCCSEEEECCS--CCEEHHHHHHHHHHHTTCCCCC
T ss_pred --c-----ccCCCcCceeEEEEHHHHHHHHHHHHhhhcc--CCCCceEEEeCC--CCCCHHHHHHHHHHHcCCCCCC
Confidence 0 0124566778999999999999998876421 123589999998 7899999999999999976543
No 41
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=99.93 E-value=1e-25 Score=229.84 Aligned_cols=277 Identities=15% Similarity=0.146 Sum_probs=173.3
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEE-EccCCCCCCCCC
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPA-VGNVCENNLGLE 182 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v-~GDl~~~~lGLs 182 (554)
.+.++++|||||||||||++|+++|++.|+ +|+++.+. ..+.+..... .....++.++ .+|++++
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~d~----- 74 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASKLANLQKRWD----AKYPGRFETAVVEDMLKQ----- 74 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHH----HHSTTTEEEEECSCTTST-----
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCcccHHHHHHHhh----ccCCCceEEEEecCCcCh-----
Confidence 346789999999999999999999999876 45555432 1222222110 0012478888 8999987
Q ss_pred HHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-----ceeecccc
Q 042694 183 EDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-----GKVMEKPF 257 (554)
Q Consensus 183 ~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-----~~i~E~~~ 257 (554)
+.++.+++++|+|||+||......++...+++|+.||.+++++|.+..++++|||+||.++++... ..++|..+
T Consensus 75 -~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~ 153 (342)
T 1y1p_A 75 -GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW 153 (342)
T ss_dssp -TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred -HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCcccc
Confidence 667777789999999999887766778899999999999999998534789999999999975421 12233211
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc--CCCcEEEEccceeeecccCCcccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER--GDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~--~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
.+........ + +......... .|..+|..+|.++..+... .+++++++||+.|||+...+....
T Consensus 154 ~~~~~~~~~~-----~---~~~~~~~~~~------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~ 219 (342)
T 1y1p_A 154 NLESIDKAKT-----L---PESDPQKSLW------VYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS 219 (342)
T ss_dssp CHHHHHHHHH-----S---CTTSTTHHHH------HHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC
T ss_pred Cchhhhhhcc-----c---cccccccchH------HHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCC
Confidence 0000000000 0 0000000112 2344566666666554432 378999999999999866432110
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
+ ....++..+..|....+.++. ...++++|+|+|++++.++..... .+..| ++++ .++++.|+++.+.
T Consensus 220 --~--~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~----~g~~~-~~~g--~~~s~~e~~~~i~ 287 (342)
T 1y1p_A 220 --G--STSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI----ERRRV-YGTA--GTFDWNTVLATFR 287 (342)
T ss_dssp --C--HHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC----CSCEE-EECC--EEECHHHHHHHHH
T ss_pred --c--cHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc----CCceE-EEeC--CCCCHHHHHHHHH
Confidence 0 001111111122211112332 457999999999999988765322 13344 3444 5899999999999
Q ss_pred hHhccC
Q 042694 416 EHYSAS 421 (554)
Q Consensus 416 ~~~~~~ 421 (554)
+.++..
T Consensus 288 ~~~~~~ 293 (342)
T 1y1p_A 288 KLYPSK 293 (342)
T ss_dssp HHCTTS
T ss_pred HHCCCc
Confidence 998864
No 42
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=3.6e-25 Score=212.48 Aligned_cols=223 Identities=12% Similarity=0.046 Sum_probs=154.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||+|++|+++|++.+. +|+++.+..- .... ...++.++.+|++++ +++..+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~-----~~~~-----~~~~~~~~~~Dl~d~------~~~~~~ 64 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPE-----KIKI-----ENEHLKVKKADVSSL------DEVCEV 64 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGG-----GCCC-----CCTTEEEECCCTTCH------HHHHHH
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcc-----cchh-----ccCceEEEEecCCCH------HHHHHH
Confidence 57999999999999999999999875 5666654310 1111 236899999999987 889999
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
++++|+|||+|+.... ....+++|+.++.+++++|++. ++++|||+||.+++....+...|. .+.
T Consensus 65 ~~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~-----~~~------ 129 (227)
T 3dhn_A 65 CKGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMD-----SGE------ 129 (227)
T ss_dssp HTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGG-----TTC------
T ss_pred hcCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCcccc-----CCc------
Confidence 9999999999986422 2237888999999999999984 789999999998766543222111 000
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
.+.. .|..+|..+|.+.+.+.+..+++++++||+.|||+.... +.. . .
T Consensus 130 -------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~---------~--~ 177 (227)
T 3dhn_A 130 -------VPEN------------ILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--GRY---------R--L 177 (227)
T ss_dssp -------SCGG------------GHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--CCC---------E--E
T ss_pred -------chHH------------HHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--cce---------e--e
Confidence 0111 234456667766666665679999999999999975421 110 0 1
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHH
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQ 408 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~ 408 (554)
+. ..+.. ..+ ..++++++|+|++++.++..+.. .+++||++++ ++.+|.
T Consensus 178 ~~-~~~~~--~~~-~~~~i~~~Dva~ai~~~l~~~~~----~g~~~~~~~~--~~~~~~ 226 (227)
T 3dhn_A 178 GK-DDMIV--DIV-GNSHISVEDYAAAMIDELEHPKH----HQERFTIGYL--EHHHHH 226 (227)
T ss_dssp ES-SBCCC--CTT-SCCEEEHHHHHHHHHHHHHSCCC----CSEEEEEECC--SCCC--
T ss_pred cC-CCccc--CCC-CCcEEeHHHHHHHHHHHHhCccc----cCcEEEEEee--hhcccC
Confidence 11 11111 112 27999999999999999877543 3689999999 677775
No 43
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=99.93 E-value=3.7e-25 Score=220.28 Aligned_cols=224 Identities=15% Similarity=0.135 Sum_probs=160.2
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
+|||||||||||++|+++|+++++ +|+++.+ +.+|+.++ +.+..+++
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r------------------------~~~D~~d~------~~~~~~~~ 53 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY---DIYPFDK------------------------KLLDITNI------SQVQQVVQ 53 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE---EEEEECT------------------------TTSCTTCH------HHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC---EEEEecc------------------------cccCCCCH------HHHHHHHH
Confidence 899999999999999999998775 5666553 23788877 77777777
Q ss_pred --CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 192 --EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 192 --~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
++|+|||+||..... +++...+++|+.|+.+++++|++. +. +|||+||.++|+... ..++++.++.
T Consensus 54 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~----~~~~~E~~~~--- 124 (287)
T 3sc6_A 54 EIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDR----PEGYDEFHNP--- 124 (287)
T ss_dssp HHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCC----SSCBCTTSCC---
T ss_pred hcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCC----CCCCCCCCCC---
Confidence 799999999988764 367899999999999999999985 55 699999999998642 2233332221
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+.. .|..+|..+|......+.+++|+||+.|||+.... ++. .++
T Consensus 125 ----------~p~~----------------~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~---~~~------~~~ 169 (287)
T 3sc6_A 125 ----------APIN----------------IYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNN---FVK------TMI 169 (287)
T ss_dssp ----------CCCS----------------HHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCC---HHH------HHH
T ss_pred ----------CCCC----------------HHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCc---HHH------HHH
Confidence 1111 12333344444333334589999999999976532 211 111
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
.....|....+.+ +...++++++|+|++++.++.... +++||++++ .++++.|+++.+.+.+|..+
T Consensus 170 ~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 170 RLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL------YGTYHVSNT--GSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp HHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC------CEEEECCCB--SCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC------CCeEEEcCC--CcccHHHHHHHHHHHcCCCc
Confidence 1111222222223 367899999999999998876532 479999998 78999999999999998753
No 44
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=99.93 E-value=2.2e-25 Score=225.15 Aligned_cols=248 Identities=17% Similarity=0.137 Sum_probs=169.0
Q ss_pred EEEEecccccccHHHHHHHHhh--CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRT--VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~--~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|||||||||||++|+++|++. +.+ |++++... + ...++.++.+|++++ +.+..+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~--------~------~~~~~~~~~~D~~d~------~~~~~~ 57 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN---VIASDIVQ--------R------DTGGIKFITLDVSNR------DEIDRA 57 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG---EEEEESSC--------C------CCTTCCEEECCTTCH------HHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE---EEEecCCC--------c------cccCceEEEecCCCH------HHHHHH
Confidence 4899999999999999999997 554 44443210 0 011456789999987 778877
Q ss_pred hc--CccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 190 AK--EVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
++ ++|+|||+||.... ...+...+++|+.||.+++++|++. ++++|||+||.++++.... ..+.++..+
T Consensus 58 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~e~~~--- 130 (317)
T 3ajr_A 58 VEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETP---KNKVPSITI--- 130 (317)
T ss_dssp HHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSC---SSSBCSSSC---
T ss_pred HhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCC---CCCcccccc---
Confidence 77 89999999997643 3457788999999999999999984 7899999999999886321 111111111
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
..+.. .|..+|..+|.+++.+....|++++++||+.+||+...|-.+..+ .....
T Consensus 131 ----------~~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~ 185 (317)
T 3ajr_A 131 ----------TRPRT------------MFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEI 185 (317)
T ss_dssp ----------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSST---HHHHH
T ss_pred ----------CCCCc------------hHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchh---HHHHH
Confidence 01111 233445666776665554558999999999999976543221110 00111
Q ss_pred e-eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 346 I-LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 346 ~-~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
+ .....|... .+++++...++++|+|+|++++.++..... ....+++||++++ ++++.|+++.+.+.++
T Consensus 186 ~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~-~~~~g~~~~i~~~---~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 186 FYYAVKREKYK-CYLAPNRALPMMYMPDALKALVDLYEADRD-KLVLRNGYNVTAY---TFTPSELYSKIKERIP 255 (317)
T ss_dssp HHHHHTTCCEE-ECSCTTCCEEEEEHHHHHHHHHHHHHCCGG-GCSSCSCEECCSE---EECHHHHHHHHHTTCC
T ss_pred HHHHHhCCCce-eecCccceeeeeEHHHHHHHHHHHHhCCcc-ccccCceEecCCc---cccHHHHHHHHHHHCC
Confidence 1 111223332 335667789999999999999988765332 1112479999863 7999999999998876
No 45
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=99.93 E-value=3.3e-25 Score=228.17 Aligned_cols=256 Identities=10% Similarity=0.068 Sum_probs=174.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC--CccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP--DVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~--~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|||||||||||++|+++|+++++ .+.+|+++++.... .. ....++.++.+|++++ +.+.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~-------~~---~~~~~~~~~~~Dl~d~------~~~~ 64 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRP-------AW---HEDNPINYVQCDISDP------DDSQ 64 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCC-------SC---CCSSCCEEEECCTTSH------HHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCc-------cc---cccCceEEEEeecCCH------HHHH
Confidence 47899999999999999999998771 11256666542100 00 0234788999999987 7888
Q ss_pred HHhcC---ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc-CCCceEE-------EEeeceecccccceeeccc
Q 042694 188 VIAKE---VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFV-------QVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 188 ~l~~~---vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v-------~vST~~v~~~~~~~i~E~~ 256 (554)
.++++ +|+|||+||... .++...+++|+.||.+++++|++. +++++|| |+||.++|+.... .+.+
T Consensus 65 ~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~--~~~~ 140 (364)
T 2v6g_A 65 AKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIES--HDPP 140 (364)
T ss_dssp HHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCC--CCSS
T ss_pred HHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcccccc--CCCC
Confidence 88887 999999999764 457788999999999999999874 2688998 8999999886420 1122
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCC-CcEEEEccceeeecccCCcccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGD-IPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~g-lp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
+.+.++.. +. ...|..+|.++..+.+..+ ++++|+||+.|||+...+....
T Consensus 141 ~~E~~~~~------------~~----------------~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~ 192 (364)
T 2v6g_A 141 YTEDLPRL------------KY----------------MNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNL 192 (364)
T ss_dssp BCTTSCCC------------SS----------------CCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCH
T ss_pred CCccccCC------------cc----------------chhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccch
Confidence 22221100 10 1123346777666554455 9999999999999866432221
Q ss_pred ccCCCCccceeeee--ccceeeeeecCC---CcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHH
Q 042694 336 MEGNRMMDPIILYY--GKGQLTGFLVDP---NGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDL 410 (554)
Q Consensus 336 ~~~~~~~~~i~~~~--~~G~~~~~~~~~---~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~ 410 (554)
... ..++... ..|....+++++ ....++++|||+|++++.++..... .+++||++++ .++|+.|+
T Consensus 193 ~~~----~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~----~g~~~ni~~~--~~~s~~e~ 262 (364)
T 2v6g_A 193 VGT----LCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA----KNEAFNVSNG--DVFKWKHF 262 (364)
T ss_dssp HHH----HHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG----TTEEEEECCS--CCBCHHHH
T ss_pred HHH----HHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC----CCceEEecCC--CcCCHHHH
Confidence 000 0011111 123322333444 3457899999999999998865432 2579999998 78999999
Q ss_pred HHHHHhHhccCCC
Q 042694 411 ARLLHEHYSASPC 423 (554)
Q Consensus 411 ~~~~~~~~~~~p~ 423 (554)
++.+.+.+|..+.
T Consensus 263 ~~~i~~~~g~~~~ 275 (364)
T 2v6g_A 263 WKVLAEQFGVECG 275 (364)
T ss_dssp HHHHHHHHTCCBC
T ss_pred HHHHHHHhCCCCC
Confidence 9999999997643
No 46
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=3.5e-25 Score=229.17 Aligned_cols=259 Identities=17% Similarity=0.101 Sum_probs=173.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH----HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF----KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~----~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++|||||||||||++|+++|++.+. +|+++++... +++...... .......++.++.+|++++ +.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~Dl~d~------~~~ 94 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDS------TCL 94 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH------HHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCccccchhhHHHHhhh-hccccCCCceEEEccCCCH------HHH
Confidence 6899999999999999999999875 4555543210 001000000 0000124788999999987 777
Q ss_pred HHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCC---ceEEEEeeceecccccceeeccccC
Q 042694 187 DVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKL---KLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~---k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
..+++ ++|+|||+||..... ++++..+++|+.||.+++++|.+. ++ ++|||+||.++++...+ .+++
T Consensus 95 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~~----~~~~ 169 (375)
T 1t2a_A 95 VKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQE----IPQK 169 (375)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCSS----SSBC
T ss_pred HHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCCC----CCCC
Confidence 77776 479999999987653 457788999999999999999984 55 79999999999886421 1222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+.++. .+.. .|..+|..+|.++..+....+++++++||+.+||+...+ ++...
T Consensus 170 E~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~~ 222 (375)
T 1t2a_A 170 ETTPF-------------YPRS------------PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA--NFVTR 222 (375)
T ss_dssp TTSCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHHH
T ss_pred ccCCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC--CcchH
Confidence 22110 1111 233345666666665544458999999999999976431 22110
Q ss_pred CCCccceeeeecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 339 NRMMDPIILYYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.....+..+..|.. ....++++...++++|||+|++++.++.... .++||++++ .++++.|+++.+.+.
T Consensus 223 --~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~~ 292 (375)
T 1t2a_A 223 --KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE------PEDFVIATG--EVHSVREFVEKSFLH 292 (375)
T ss_dssp --HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS------CCCEEECCS--CCEEHHHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC------CceEEEeCC--CcccHHHHHHHHHHH
Confidence 00111111112321 1234677888999999999999998876422 268999998 789999999999999
Q ss_pred hccC
Q 042694 418 YSAS 421 (554)
Q Consensus 418 ~~~~ 421 (554)
+|..
T Consensus 293 ~g~~ 296 (375)
T 1t2a_A 293 IGKT 296 (375)
T ss_dssp TTCC
T ss_pred hCCC
Confidence 9865
No 47
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=99.92 E-value=2.5e-24 Score=214.16 Aligned_cols=224 Identities=17% Similarity=0.161 Sum_probs=156.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|||||| ||||++|+++|+++++ +|+++.+. ..+.+ ...++.++.+|+.+. +
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~d~------~--- 60 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGW---RIIGTSRNPDQMEAI-----------RASGAEPLLWPGEEP------S--- 60 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTC---EEEEEESCGGGHHHH-----------HHTTEEEEESSSSCC------C---
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCC---EEEEEEcChhhhhhH-----------hhCCCeEEEeccccc------c---
Confidence 478999998 9999999999999886 45555432 11111 124788999999984 2
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
.+++|+|||+|+......+ .+.+++++|++. .++++|||+||.++|+...+ .++.+.++.
T Consensus 61 --~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~----~~~~E~~~~--- 121 (286)
T 3ius_A 61 --LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG----AWVDETTPL--- 121 (286)
T ss_dssp --CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT----CEECTTSCC---
T ss_pred --cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCC----CCcCCCCCC---
Confidence 5789999999998655432 357889999874 37899999999999987532 122222211
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+.+ .|..+|+.+|.++... .+++++|+||+.|||+...++...
T Consensus 122 ----------~p~~------------~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~----------- 165 (286)
T 3ius_A 122 ----------TPTA------------ARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFSKL----------- 165 (286)
T ss_dssp ----------CCCS------------HHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSSTTS-----------
T ss_pred ----------CCCC------------HHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHHHHH-----------
Confidence 1111 1223344555554443 489999999999999876442211
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCC
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPC 423 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~ 423 (554)
..|....+.. ++...++++|+|+|++++.++.... .+++||++++ +++++.|+++.+.+.+|..+.
T Consensus 166 ---~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~ 231 (286)
T 3ius_A 166 ---GKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPD-----PGAVYNVCDD--EPVPPQDVIAYAAELQGLPLP 231 (286)
T ss_dssp ---SSSCCCEEEC-TTCCBCEEEHHHHHHHHHHHHHSCC-----TTCEEEECCS--CCBCHHHHHHHHHHHHTCCCC
T ss_pred ---hcCCccccCC-CCcccceEEHHHHHHHHHHHHhCCC-----CCCEEEEeCC--CCccHHHHHHHHHHHcCCCCC
Confidence 1122222222 3567899999999999999887643 2479999998 789999999999999997643
No 48
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=99.92 E-value=3e-25 Score=229.23 Aligned_cols=259 Identities=17% Similarity=0.111 Sum_probs=173.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH----HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF----KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~----~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
||+|||||||||||++|+++|++.+. +|+++++... +++...... ......++.++.+|++++ +.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~------~~ 69 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFNTERVDHIYQD--PHTCNPKFHLHYGDLSDT------SN 69 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC-----------------------CCEEECCCCSSCH------HH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccchHHHHHHhhc--cccCCCceEEEECCCCCH------HH
Confidence 57899999999999999999999875 5666654321 111110000 000124788999999987 77
Q ss_pred HHHHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCC---ceEEEEeeceecccccceeecccc
Q 042694 186 ADVIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKL---KLFVQVSTAYVNGQRRGKVMEKPF 257 (554)
Q Consensus 186 ~~~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~---k~~v~vST~~v~~~~~~~i~E~~~ 257 (554)
+..++++ +|+|||+||..... +.+...+++|+.||.+++++|.+. ++ ++|||+||.++++... ..++
T Consensus 70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~----~~~~ 144 (372)
T 1db3_A 70 LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQ----EIPQ 144 (372)
T ss_dssp HHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCC----SSSB
T ss_pred HHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCC----CCCC
Confidence 7777764 79999999976542 456778899999999999999984 56 7999999999988642 1122
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWME 337 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~ 337 (554)
++..+. .+.. .|..+|..+|.+++......+++++++||+.+||+...+ ++..
T Consensus 145 ~E~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~ 197 (372)
T 1db3_A 145 KETTPF-------------YPRS------------PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE--TFVT 197 (372)
T ss_dssp CTTSCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH
T ss_pred CccCCC-------------CCCC------------hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC--cchh
Confidence 222111 1111 233345566666665544458999999999999976532 1111
Q ss_pred CCCCccceeeeecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHh
Q 042694 338 GNRMMDPIILYYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHE 416 (554)
Q Consensus 338 ~~~~~~~i~~~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~ 416 (554)
. ....++..+..|.. ....++++...++++|||+|++++.++.... .++||++++ +++++.|+++.+.+
T Consensus 198 ~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~ 267 (372)
T 1db3_A 198 R--KITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ------PEDFVIATG--VQYSVRQFVEMAAA 267 (372)
T ss_dssp H--HHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS------CCCEEECCC--CCEEHHHHHHHHHH
T ss_pred h--HHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC------CceEEEcCC--CceeHHHHHHHHHH
Confidence 0 00111111223322 2234677888999999999999988764321 368999998 78999999999999
Q ss_pred HhccC
Q 042694 417 HYSAS 421 (554)
Q Consensus 417 ~~~~~ 421 (554)
.+|..
T Consensus 268 ~~g~~ 272 (372)
T 1db3_A 268 QLGIK 272 (372)
T ss_dssp TTTEE
T ss_pred HhCCC
Confidence 98864
No 49
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=99.92 E-value=5.7e-25 Score=224.48 Aligned_cols=255 Identities=15% Similarity=0.037 Sum_probs=175.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++|+|||||||||||++|+++|++.|+ +|+++++.. .+.+.... ...++.++.+|++++ +
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~------~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFASWRLKELG-------IENDVKIIHMDLLEF------S 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTTHHHHHTT-------CTTTEEECCCCTTCH------H
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccccccHhhcc-------ccCceeEEECCCCCH------H
Confidence 468999999999999999999999875 566654321 11222111 124788999999987 7
Q ss_pred HHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCC-ceEEEEeeceecccccceeeccccC
Q 042694 185 LADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKL-KLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~-k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
.+..+++ ++|+|||+||..... ++++..+++|+.||.+++++|.++ ++ ++|||+||.++|+...+ .++.
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~----~~~~ 140 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQE----IPQT 140 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSS----SSBC
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCC----CCCC
Confidence 7777776 469999999987642 467888999999999999999986 55 89999999999986421 1222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+..+ .++.. .|..+|..+|.+++.+....++++++.|+..++|+.... .+...
T Consensus 141 e~~~-------------~~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~--~~~~~ 193 (345)
T 2z1m_A 141 EKTP-------------FYPRS------------PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGI--EFVTR 193 (345)
T ss_dssp TTSC-------------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHHH
T ss_pred ccCC-------------CCCCC------------hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCC--cchhH
Confidence 2111 01111 233345666666665544458999999999999965321 11000
Q ss_pred CCCccceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 339 NRMMDPIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.....+.....|. .....++++...++++++|+|++++.++.... .++||++++ .++++.|+++.+.+.
T Consensus 194 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~ 263 (345)
T 2z1m_A 194 --KITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE------PDDYVIATG--ETHTVREFVEKAAKI 263 (345)
T ss_dssp --HHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS------CCCEEECCS--CCEEHHHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC------CceEEEeCC--CCccHHHHHHHHHHH
Confidence 0000011111222 12234566777899999999999998875421 268999998 789999999999999
Q ss_pred hccC
Q 042694 418 YSAS 421 (554)
Q Consensus 418 ~~~~ 421 (554)
+|..
T Consensus 264 ~g~~ 267 (345)
T 2z1m_A 264 AGFD 267 (345)
T ss_dssp TTCC
T ss_pred hCCC
Confidence 9875
No 50
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=99.92 E-value=3.9e-25 Score=224.88 Aligned_cols=246 Identities=18% Similarity=0.201 Sum_probs=168.6
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+.+++|+|||||||||||++|+++|++.+. +|+++++..... .+... ...++.++.+|++++ +
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~------~l~~v~~~~~Dl~d~------~ 78 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFATGK-REVLP------PVAGLSVIEGSVTDA------G 78 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCSSSC-GGGSC------SCTTEEEEECCTTCH------H
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCccc-hhhhh------ccCCceEEEeeCCCH------H
Confidence 3456789999999999999999999999886 455554311000 00000 125788999999987 8
Q ss_pred HHHHHhc--CccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCC
Q 042694 185 LADVIAK--EVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMG 260 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~ 260 (554)
.++.+++ ++|+|||+||.... .+.++ +++|+.|+.+++++|.+. ++++|||+||.++++...+ .+.++++.
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~--~~~~~~E~ 153 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPAT--VPIPIDSP 153 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSS--SSBCTTCC
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCcc--CCCCcCCC
Confidence 8888888 99999999998764 23344 899999999999999984 7899999999999875421 01122211
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
+ .+ ...|..+|..+|.+....+++++++||+.+||+... .+++.
T Consensus 154 ~---------------~~----------------~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~--~~~~~--- 197 (330)
T 2pzm_A 154 T---------------AP----------------FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLA--IGPIP--- 197 (330)
T ss_dssp C---------------CC----------------CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCC--SSHHH---
T ss_pred C---------------CC----------------CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCC--CCHHH---
Confidence 1 00 011333444444444333899999999999997641 12111
Q ss_pred CccceeeeeccceeeeeecCCCcccccchhhHHHH-HHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 341 MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVN-ATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 341 ~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~-aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
.++..+..|. ...+++. ..++++++|+|+ +++.++... . +++||++++ .++++.|+++.+.+.+|
T Consensus 198 ---~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~-----~-g~~~~v~~~--~~~s~~e~~~~i~~~~g 263 (330)
T 2pzm_A 198 ---TFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGR-----P-TGVFNVSTG--EGHSIKEVFDVVLDYVG 263 (330)
T ss_dssp ---HHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTC-----C-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred ---HHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcC-----C-CCEEEeCCC--CCCCHHHHHHHHHHHhC
Confidence 1111111222 1223445 689999999999 998876542 1 589999998 78999999999999998
Q ss_pred cC
Q 042694 420 AS 421 (554)
Q Consensus 420 ~~ 421 (554)
..
T Consensus 264 ~~ 265 (330)
T 2pzm_A 264 AT 265 (330)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 51
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=99.92 E-value=5.2e-25 Score=224.20 Aligned_cols=245 Identities=18% Similarity=0.202 Sum_probs=162.7
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.....++|+|||||||||||++|+++|++.+. +|+++++..... .+... ...++.++.+|++++
T Consensus 15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~l~------~~~~~~~~~~Dl~d~------ 78 (333)
T 2q1w_A 15 VPRGSHMKKVFITGICGQIGSHIAELLLERGD---KVVGIDNFATGR-REHLK------DHPNLTFVEGSIADH------ 78 (333)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC-GGGSC------CCTTEEEEECCTTCH------
T ss_pred eeecCCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCCccc-hhhHh------hcCCceEEEEeCCCH------
Confidence 33446789999999999999999999999875 566654321000 00000 015788999999987
Q ss_pred HHHHHHhcC--ccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc----cccceeecc
Q 042694 184 DLADVIAKE--VDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG----QRRGKVMEK 255 (554)
Q Consensus 184 ~~~~~l~~~--vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~----~~~~~i~E~ 255 (554)
+.++.++++ +|+|||+||..... ..++ +++|+.|+.+++++|.+. ++++|||+||.++++ ...+
T Consensus 79 ~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~~----- 150 (333)
T 2q1w_A 79 ALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQPV----- 150 (333)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSSB-----
T ss_pred HHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCCC-----
Confidence 788888876 99999999986652 3333 899999999999999984 789999999999987 3211
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
++++.+ . +... .|..+|..+|.++... .. +++++||+.+||+... .++
T Consensus 151 ~~~E~~--~------------p~~~------------~Y~~sK~~~E~~~~~s---~~-~~~ilR~~~v~gp~~~--~~~ 198 (333)
T 2q1w_A 151 RLDHPR--N------------PANS------------SYAISKSANEDYLEYS---GL-DFVTFRLANVVGPRNV--SGP 198 (333)
T ss_dssp CTTSCC--C------------CTTC------------HHHHHHHHHHHHHHHH---TC-CEEEEEESEEESTTCC--SSH
T ss_pred CcCCCC--C------------CCCC------------chHHHHHHHHHHHHhh---hC-CeEEEeeceEECcCCc--CcH
Confidence 222111 0 0001 1222344444444330 22 8999999999997631 111
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
+.. ++.....|. . +++ ++...++++++|+|++++.++.... +++||++++ .++++.|+++.+.
T Consensus 199 ~~~------~~~~~~~~~-~-~~~-~~~~~~~i~v~Dva~ai~~~~~~~~------g~~~~v~~~--~~~s~~e~~~~i~ 261 (333)
T 2q1w_A 199 LPI------FFQRLSEGK-K-CFV-TKARRDFVFVKDLARATVRAVDGVG------HGAYHFSSG--TDVAIKELYDAVV 261 (333)
T ss_dssp HHH------HHHHHHTTC-C-CEE-EECEECEEEHHHHHHHHHHHHTTCC------CEEEECSCS--CCEEHHHHHHHHH
T ss_pred HHH------HHHHHHcCC-e-eeC-CCceEeeEEHHHHHHHHHHHHhcCC------CCEEEeCCC--CCccHHHHHHHHH
Confidence 111 111111222 1 223 3456899999999999998875422 589999998 7899999999999
Q ss_pred hHhccC
Q 042694 416 EHYSAS 421 (554)
Q Consensus 416 ~~~~~~ 421 (554)
+.+|..
T Consensus 262 ~~~g~~ 267 (333)
T 2q1w_A 262 EAMALP 267 (333)
T ss_dssp HHTTCS
T ss_pred HHhCCC
Confidence 999875
No 52
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=99.92 E-value=1.4e-24 Score=221.59 Aligned_cols=263 Identities=16% Similarity=0.081 Sum_probs=175.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCC----ccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPD----VGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~----V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|||||||||||++|+++|++.+.. +.+|+++++... ... .....++.++.+|++++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~-----~~~----~~~~~~~~~~~~Dl~d~------ 76 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP-----EAP----AGFSGAVDARAADLSAP------ 76 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC-----CCC----TTCCSEEEEEECCTTST------
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC-----ccc----cccCCceeEEEcCCCCH------
Confidence 56889999999999999999999998720 125666553210 000 01235788999999998
Q ss_pred HHHHHHh-cCccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcC----CCceEEEEeeceecccccceeeccc
Q 042694 184 DLADVIA-KEVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCN----KLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 184 ~~~~~l~-~~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~----~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
+.++.++ .++|+|||+||.... .+++...+++|+.||.+++++|++.+ ++++|||+||.++++... ..+
T Consensus 77 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~----~~~ 152 (342)
T 2hrz_A 77 GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL----PYP 152 (342)
T ss_dssp THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC----CSS
T ss_pred HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC----CCC
Confidence 7777777 489999999997653 34677889999999999999998853 378999999999988632 112
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee-cccCCcccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES-TCKEPFSGW 335 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g-~~~~p~~g~ 335 (554)
+++.++. .+.. .|..+|..+|.++..+....+++.+++|++.|+| +.. +...
T Consensus 153 ~~E~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~-~~~~- 205 (342)
T 2hrz_A 153 IPDEFHT-------------TPLT------------SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK-PNAA- 205 (342)
T ss_dssp BCTTCCC-------------CCSS------------HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS-CCCS-
T ss_pred cCCCCCC-------------CCcc------------hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC-Ccch-
Confidence 2222110 1111 2334456667766665555689999999999997 322 1000
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
... ....++.....|....++.+++...++++++|+|++++.++...... ...+++||+++ .++++.|+++.+.
T Consensus 206 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~-~~~~~~~ni~g---~~~s~~e~~~~i~ 279 (342)
T 2hrz_A 206 ASG--FFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEK-VGPRRNLSMPG---LSATVGEQIEALR 279 (342)
T ss_dssp GGG--HHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHH-HCSCCEEECCC---EEEEHHHHHHHHH
T ss_pred hHH--HHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccc-cCCccEEEcCC---CCCCHHHHHHHHH
Confidence 000 01111111122333234445566778999999999999887643210 01247999954 4799999999999
Q ss_pred hHhccCC
Q 042694 416 EHYSASP 422 (554)
Q Consensus 416 ~~~~~~p 422 (554)
+.+|..+
T Consensus 280 ~~~g~~~ 286 (342)
T 2hrz_A 280 KVAGEKA 286 (342)
T ss_dssp HHHCHHH
T ss_pred HHcCccc
Confidence 9988754
No 53
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=99.92 E-value=7.2e-25 Score=219.42 Aligned_cols=232 Identities=18% Similarity=0.199 Sum_probs=161.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|+ +++ +|+++++.. ..+.+|+.++ +.+..++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~---~V~~~~r~~--------------------~~~~~D~~d~------~~~~~~~ 50 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG---NLIALDVHS--------------------KEFCGDFSNP------KGVAETV 50 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS---EEEEECTTC--------------------SSSCCCTTCH------HHHHHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC---eEEEecccc--------------------ccccccCCCH------HHHHHHH
Confidence 479999999999999999999 675 566665421 1257899877 7777777
Q ss_pred cC--ccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 191 KE--VDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 191 ~~--vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
++ +|+|||+||.... ..+++..+++|+.||.+++++|++. +. +|||+||.++|+...+ .++.+.++.
T Consensus 51 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~----~~~~E~~~~-- 122 (299)
T 1n2s_A 51 RKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGD----IPWQETDAT-- 122 (299)
T ss_dssp HHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTT----CCBCTTSCC--
T ss_pred HhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCC----CCCCCCCCC--
Confidence 65 9999999998764 3567889999999999999999884 55 7999999999986431 222222211
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+.. .|..+|..+|.++... ..+++|+||+.|||+... +++. .+
T Consensus 123 -----------~p~~------------~Y~~sK~~~E~~~~~~----~~~~~ilRp~~v~G~~~~---~~~~------~~ 166 (299)
T 1n2s_A 123 -----------SPLN------------VYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAK------TM 166 (299)
T ss_dssp -----------CCSS------------HHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHH------HH
T ss_pred -----------CCcc------------HHHHHHHHHHHHHHHh----CCCeEEEeeeeecCCCcC---cHHH------HH
Confidence 1111 1222344444444432 348999999999997653 2211 11
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCC-CCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKP-DINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~-~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+.....|......+ +...++++++|+|++++.++..... .. .+++||++++ +++++.|+++.+.+.+|..+
T Consensus 167 ~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 167 LRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALN--KPEVAGLYHLVAG--GTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp HHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHH--CGGGCEEEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhcc--ccccCceEEEeCC--CCCCHHHHHHHHHHHhCCCc
Confidence 11111222212223 3678999999999999998876421 00 1479999998 78999999999999998764
No 54
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=99.92 E-value=2.2e-24 Score=217.57 Aligned_cols=240 Identities=13% Similarity=0.107 Sum_probs=142.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|+++|++.++ +|+++++..- . .+ ++.+|++++ +.+..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~-----~----------~~--~~~~Dl~d~------~~~~~~ 55 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW---HAVGCGFRRA-----R----------PK--FEQVNLLDS------NAVHHI 55 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEC-----------------------------------------CHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC---eEEEEccCCC-----C----------CC--eEEecCCCH------HHHHHH
Confidence 57899999999999999999999875 5666653210 0 12 578999987 666666
Q ss_pred hc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 190 AK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
++ ++|+|||+||.... ..+++..+++|+.||.+++++|.+. +. +|||+||.++++.... ++++.++.
T Consensus 56 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~-----~~~E~~~~- 127 (315)
T 2ydy_A 56 IHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNP-----PYREEDIP- 127 (315)
T ss_dssp HHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSC-----SBCTTSCC-
T ss_pred HHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCC-----CCCCCCCC-
Confidence 65 59999999998654 3467788999999999999999985 55 9999999999886322 22222110
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
.+.. .|..+|..+|......+++++++||+.|||+...+..+++..
T Consensus 128 ------------~~~~----------------~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~------ 173 (315)
T 2ydy_A 128 ------------APLN----------------LYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTV------ 173 (315)
T ss_dssp ------------CCCS----------------HHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGG------
T ss_pred ------------CCcC----------------HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHH------
Confidence 1111 123334444444333367899999999999766421122211
Q ss_pred eeeeec-cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 345 IILYYG-KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 345 i~~~~~-~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
++.... .|..... .++...++++++|+|++++.++..... ....+++||++++ .++++.|+++.+.+.+|..+
T Consensus 174 ~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 174 MFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp GHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHT-CTTCCEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhcc-ccCCCCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 111111 2221112 235678999999999999988765310 0123589999998 78999999999999998764
No 55
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=99.92 E-value=7.8e-25 Score=227.06 Aligned_cols=257 Identities=14% Similarity=0.054 Sum_probs=173.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH----HHHHHHcCCchhhhccC-cEEEEEccCCCCCCCCCHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF----KCLKQTYGKSYQAFMLS-KLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~----~~l~~~~~~~~~~~~~~-kv~~v~GDl~~~~lGLs~~~ 185 (554)
++|||||||||||++|+++|++.++ +|+++++..- +++...... . ..... ++.++.+|++++ +.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~------~~ 97 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNTQRINHIYID-P-HNVNKALMKLHYADLTDA------SS 97 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCH------HH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCCccccchhhhhhhhc-c-ccccccceEEEECCCCCH------HH
Confidence 6899999999999999999999876 4555543210 001000000 0 00012 788999999987 77
Q ss_pred HHHHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCc-----eEEEEeeceecccccceeecc
Q 042694 186 ADVIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLK-----LFVQVSTAYVNGQRRGKVMEK 255 (554)
Q Consensus 186 ~~~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k-----~~v~vST~~v~~~~~~~i~E~ 255 (554)
+..++++ +|+|||+||..... +.+...+++|+.||.+++++|.+. +++ +|||+||.++|+...+
T Consensus 98 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~~~~----- 171 (381)
T 1n7h_A 98 LRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGSTPP----- 171 (381)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTTSCS-----
T ss_pred HHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCCCCC-----
Confidence 7777764 79999999987753 467788999999999999999984 555 9999999999987432
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
++++.++. .+.. .|..+|..+|.++..+....+++++++|++.+||+...+ ++
T Consensus 172 ~~~E~~~~-------------~~~~------------~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~ 224 (381)
T 1n7h_A 172 PQSETTPF-------------HPRS------------PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NF 224 (381)
T ss_dssp SBCTTSCC-------------CCCS------------HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TS
T ss_pred CCCCCCCC-------------CCCC------------chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC--cc
Confidence 22222211 1111 233445666666665544458999999999999975421 11
Q ss_pred ccCCCCccceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLL 414 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~ 414 (554)
... .....+..+..|. .....++++...++++|+|+|++++.++.... .++||++++ .++++.|+++.+
T Consensus 225 ~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i 294 (381)
T 1n7h_A 225 VTR--KITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK------PDDYVVATE--EGHTVEEFLDVS 294 (381)
T ss_dssp HHH--HHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS------CCEEEECCS--CEEEHHHHHHHH
T ss_pred hhH--HHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC------CCeEEeeCC--CCCcHHHHHHHH
Confidence 100 0001111111222 12234666778999999999999998875422 379999998 799999999999
Q ss_pred HhHhccC
Q 042694 415 HEHYSAS 421 (554)
Q Consensus 415 ~~~~~~~ 421 (554)
.+.+|..
T Consensus 295 ~~~~g~~ 301 (381)
T 1n7h_A 295 FGYLGLN 301 (381)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 9999864
No 56
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.92 E-value=1.4e-24 Score=242.78 Aligned_cols=269 Identities=13% Similarity=0.085 Sum_probs=176.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---h---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---L---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++|+|||||||||||++|+++|++.+. +|+++++. . .+++... ...++.++.+|++++
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~--------~~~~v~~v~~Dl~d~---- 73 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEVL--------TKHHIPFYEVDLCDR---- 73 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHHH--------HTSCCCEEECCTTCH----
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCcchHHHHHHHhhc--------cCCceEEEEcCCCCH----
Confidence 5678999999999999999999999875 45555421 1 1122111 124678899999987
Q ss_pred CHHHHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccc
Q 042694 182 EEDLADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 182 s~~~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
+.+..+++ ++|+|||+||..... +...+.+++|+.|+.+++++|++. ++++|||+||.++++.....-...+
T Consensus 74 --~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~~~ 150 (699)
T 1z45_A 74 --KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIP 150 (699)
T ss_dssp --HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred --HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCccccccCC
Confidence 77887777 899999999987643 345678999999999999999984 7899999999999876321000011
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc--CCCcEEEEccceeeecccCCccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER--GDIPVVIIRPSVIESTCKEPFSG 334 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~--~glp~~I~Rp~~V~g~~~~p~~g 334 (554)
+++..+ ..+.. .|..+|..+|.++..+... .+++++|+||+.|||+....+.|
T Consensus 151 ~~E~~~-------------~~p~~------------~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g 205 (699)
T 1z45_A 151 IPEECP-------------LGPTN------------PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIG 205 (699)
T ss_dssp BCTTSC-------------CCCCS------------HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCC
T ss_pred ccccCC-------------CCCCC------------hHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccc
Confidence 111111 01111 2333455666666554433 68999999999999975432211
Q ss_pred cccC--CCCccceeeee--ccc-eeeeeec------CCCcccccchhhHHHHHHHHHHHHhcc--cCCCCCeEEEeeCCC
Q 042694 335 WMEG--NRMMDPIILYY--GKG-QLTGFLV------DPNGILDVVPADMVVNATLAAIAQHGM--IQKPDINVYQIASSV 401 (554)
Q Consensus 335 ~~~~--~~~~~~i~~~~--~~G-~~~~~~~------~~~~~~d~vpVD~va~aii~~~~~~~~--~~~~~~~vyn~~~~~ 401 (554)
-... .....+.+... +.+ .+. +++ +++...++|||||+|++++.++..... .....+++||++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~- 283 (699)
T 1z45_A 206 EDPLGIPNNLLPYMAQVAVGRREKLY-IFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG- 283 (699)
T ss_dssp CCCSSSCCSHHHHHHHHHTTSSSCCC-CC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-
T ss_pred cccccchhHHHHHHHHHHhcCCCceE-EeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-
Confidence 1000 00011111111 111 221 222 567789999999999999998765321 01112479999998
Q ss_pred CCcccHHHHHHHHHhHhccCC
Q 042694 402 VNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 402 ~~~it~~e~~~~~~~~~~~~p 422 (554)
+++++.|+++.+.+.+|..+
T Consensus 284 -~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 284 -KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp -CCEEHHHHHHHHHHHHTCCC
T ss_pred -CCCcHHHHHHHHHHHhCCCC
Confidence 78999999999999998753
No 57
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=99.92 E-value=3.9e-24 Score=223.02 Aligned_cols=248 Identities=13% Similarity=0.150 Sum_probs=172.0
Q ss_pred chhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcCCchhhhccCcEEEEEccCCCCCCC
Q 042694 103 GIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 103 ~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lG 180 (554)
.+....++|+|||||||||||++|+++|++.++ .+|+++++... ..+........ .....++.++.||++++
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~v~~~~~Dl~d~--- 101 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP--QKLHVVDISENNMVELVRDIRSSF-GYINGDFQTFALDIGSI--- 101 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC--SEEEEECSCHHHHHHHHHHHHHHT-CCCSSEEEEECCCTTSH---
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC--CEEEEEECCcchHHHHHHHHHHhc-CCCCCcEEEEEEeCCCH---
Confidence 455667899999999999999999999999874 36777764321 11111110000 00135899999999988
Q ss_pred CCHHHHHHHh--cCccEEEEcCCCCCch--h---hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceee
Q 042694 181 LEEDLADVIA--KEVDVIVNSAANTTFD--E---RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 181 Ls~~~~~~l~--~~vdiViH~AA~v~~~--~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~ 253 (554)
+....+. .++|+|||+||..+.. . .+..++++|+.||.+++++|.+. ++++|||+||.....
T Consensus 102 ---~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-gv~r~V~iSS~~~~~------- 170 (399)
T 3nzo_A 102 ---EYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDA-GAKKYFCVSTDKAAN------- 170 (399)
T ss_dssp ---HHHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEECCSCSSC-------
T ss_pred ---HHHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-------
Confidence 6666665 4899999999986542 1 23688999999999999999985 789999999942110
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS 333 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~ 333 (554)
+.. .|..+|..+|.++..+... ++++++||++|+|+....++
T Consensus 171 ------------------------p~~------------~Yg~sK~~~E~~~~~~~~~--~~~~~vR~g~v~G~~~~~i~ 212 (399)
T 3nzo_A 171 ------------------------PVN------------MMGASKRIMEMFLMRKSEE--IAISTARFANVAFSDGSLLH 212 (399)
T ss_dssp ------------------------CCS------------HHHHHHHHHHHHHHHHTTT--SEEEEECCCEETTCTTSHHH
T ss_pred ------------------------CcC------------HHHHHHHHHHHHHHHHhhh--CCEEEeccceeeCCCCchHH
Confidence 011 2333455666665554332 99999999999997653334
Q ss_pred ccccCCCCccceeeeeccc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCC-CcccHHHHH
Q 042694 334 GWMEGNRMMDPIILYYGKG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVV-NPLVFQDLA 411 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~-~~it~~e~~ 411 (554)
.|... +..| .+. .+ ++...++++++|+|++++.++.... .+++|++..+.. +.+|+.|++
T Consensus 213 ~~~~~----------i~~g~~~~-~~--gd~~r~~v~v~D~a~~~~~a~~~~~-----~g~i~~l~~g~~~~~~s~~ela 274 (399)
T 3nzo_A 213 GFNQR----------IQKNQPIV-AP--NDIKRYFVTPQESGELCLMSCIFGE-----NRDIFFPKLSEALHLISFADIA 274 (399)
T ss_dssp HHHHH----------HHTTCCEE-EE--SSCEECEECHHHHHHHHHHHHHHCC-----TTEEEEECCCTTCCCEEHHHHH
T ss_pred HHHHH----------HHhCCCEe-cC--CCCeeccCCHHHHHHHHHHHhccCC-----CCCEEEecCCCCCCcccHHHHH
Confidence 33322 1122 222 22 4567889999999999999886522 257997776621 239999999
Q ss_pred HHHHhHhccCCC
Q 042694 412 RLLHEHYSASPC 423 (554)
Q Consensus 412 ~~~~~~~~~~p~ 423 (554)
+.+.+..|..|.
T Consensus 275 ~~l~~~~G~~~~ 286 (399)
T 3nzo_A 275 VKYLKQLGYEPH 286 (399)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHhCCCcc
Confidence 999999997654
No 58
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.92 E-value=7.4e-25 Score=243.24 Aligned_cols=272 Identities=15% Similarity=0.184 Sum_probs=180.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..++++|||||||||||++|+++|++. ++ +|+++++... .+.. . ....++.++.||++++ ++.
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~---~V~~~~r~~~-~~~~-~------~~~~~v~~v~~Dl~d~-----~~~ 375 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSD-AISR-F------LNHPHFHFVEGDISIH-----SEW 375 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSE---EEEEEESCCT-TTGG-G------TTCTTEEEEECCTTTC-----HHH
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCC---EEEEEEcCch-hhhh-h------ccCCceEEEECCCCCc-----HHH
Confidence 356889999999999999999999986 44 5666653211 0000 0 0135789999999987 234
Q ss_pred HHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
++.+.+++|+|||+||.... ..++...+++|+.||.+++++|++. + ++|||+||.++++...+ .++++.++
T Consensus 376 ~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~----~~~~E~~~ 449 (660)
T 1z7e_A 376 IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD----KYFDEDHS 449 (660)
T ss_dssp HHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCS----SSBCTTTC
T ss_pred HHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCC----cccCCCcc
Confidence 67777899999999998763 3567889999999999999999985 5 89999999999886421 12222221
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC-CCC
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG-NRM 341 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~-~~~ 341 (554)
..... +.... .. .|..+|+.+|.++..+....|++++++||+.|||+...+...+..+ ...
T Consensus 450 ~~~~~---------p~~~p---~~------~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~ 511 (660)
T 1z7e_A 450 NLIVG---------PVNKP---RW------IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRA 511 (660)
T ss_dssp CEEEC---------CTTCT---TH------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCH
T ss_pred ccccC---------cccCC---CC------CcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccch
Confidence 00000 00000 01 2334466677766655444589999999999999876432110000 000
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC-cccHHHHHHHHHhHhcc
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN-PLVFQDLARLLHEHYSA 420 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~-~it~~e~~~~~~~~~~~ 420 (554)
...++..+..|....++++++...++++|+|+|++++.++..... ...+++||++++ . ++++.|+++.+.+.+|.
T Consensus 512 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~--~~~g~~~ni~~~--~~~~s~~el~~~i~~~~g~ 587 (660)
T 1z7e_A 512 ITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN--RCDGEIINIGNP--ENEASIEELGEMLLASFEK 587 (660)
T ss_dssp HHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCG--GGEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccc--cCCCeEEEECCC--CCCcCHHHHHHHHHHHhcC
Confidence 111111122233333446677889999999999999998865321 123589999987 5 89999999999999987
Q ss_pred CC
Q 042694 421 SP 422 (554)
Q Consensus 421 ~p 422 (554)
.+
T Consensus 588 ~~ 589 (660)
T 1z7e_A 588 HP 589 (660)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 59
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=99.92 E-value=5.6e-25 Score=222.51 Aligned_cols=258 Identities=17% Similarity=0.154 Sum_probs=159.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-EL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
||+|||||||||||++|+++|+++|++ |+++.+ .. ...+. ..+. ...++.++.||++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~Dl~d~------ 65 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS---VNTTIRADPERKRDVSFLT-NLPG-----ASEKLHFFNADLSNP------ 65 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCCC----CCCHHHH-TSTT-----HHHHEEECCCCTTCG------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE---EEEEEeCCccchhHHHHHH-hhhc-----cCCceEEEecCCCCH------
Confidence 578999999999999999999998864 444332 11 11111 0100 113678899999988
Q ss_pred HHHHHHhcCccEEEEcCCCCCchh--hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCC
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDE--RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGD 261 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~--~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~ 261 (554)
+.++.+++++|+|||+|+.+.+.. +.+.++++|+.||.+++++|.+..++++|||+||.+++..... .+.++.+.+
T Consensus 66 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~--~~~~~~e~~ 143 (322)
T 2p4h_X 66 DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--DKDVLDESD 143 (322)
T ss_dssp GGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSS--CCSEECTTC
T ss_pred HHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCC--CCeecCCcc
Confidence 788888899999999998765432 2445899999999999999987536899999999875432111 011122111
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhcc-CCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccccccCC
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESK-EFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSGWMEGN 339 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k-~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g~~~~~ 339 (554)
. .+.. ......... .|..+|..+|.++..+....|++++++||+.|||+...+ .+.+..
T Consensus 144 ~----------------~~~~-~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~-- 204 (322)
T 2p4h_X 144 W----------------SDVD-LLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIE-- 204 (322)
T ss_dssp C----------------CCHH-HHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHH--
T ss_pred c----------------cchh-hhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHH--
Confidence 0 0000 000000000 144455667776655544568999999999999976532 111110
Q ss_pred CCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 340 RMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
. +.....|....+ ++ ...++++|+|+|++++.++.... ..+ .|| +++ .++++.|+++.+.+.++
T Consensus 205 ----~-~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~----~~g-~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 205 ----K-ALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSV----PGG-RYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp ----H-HTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCC----CCE-EEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred ----H-HHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcC----CCC-CEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 0 000001111111 11 23489999999999998875422 123 588 455 58999999999988764
No 60
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=99.92 E-value=4.9e-24 Score=212.69 Aligned_cols=225 Identities=16% Similarity=0.203 Sum_probs=159.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
..++|||||||||||++|+++|++++. +|+++++. .+|++++ +.+..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------~~Dl~d~------~~~~~ 57 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQ------------------------DLDITNV------LAVNK 57 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTT------------------------TCCTTCH------HHHHH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCC---eEEeccCc------------------------cCCCCCH------HHHHH
Confidence 357999999999999999999998775 56665532 3688876 77777
Q ss_pred Hhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 189 IAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 189 l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+++ ++|+|||+||..... ++++..+++|+.|+.+++++|++. +. +|||+||.++++... ..++++.++.
T Consensus 58 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~----~~~~~E~~~~ 131 (292)
T 1vl0_A 58 FFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEA----KEPITEFDEV 131 (292)
T ss_dssp HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCC----SSCBCTTSCC
T ss_pred HHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCC----CCCCCCCCCC
Confidence 777 799999999987653 567889999999999999999985 56 999999999988642 1222222210
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+.. .|..+|..+|.++.. .+.+++++||+.|||+ .. +++..
T Consensus 132 -------------~~~~------------~Y~~sK~~~E~~~~~----~~~~~~~lR~~~v~G~-~~---~~~~~----- 173 (292)
T 1vl0_A 132 -------------NPQS------------AYGKTKLEGENFVKA----LNPKYYIVRTAWLYGD-GN---NFVKT----- 173 (292)
T ss_dssp -------------CCCS------------HHHHHHHHHHHHHHH----HCSSEEEEEECSEESS-SS---CHHHH-----
T ss_pred -------------CCcc------------HHHHHHHHHHHHHHh----hCCCeEEEeeeeeeCC-Cc---ChHHH-----
Confidence 1111 122233444444433 3457999999999997 32 22211
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
++.....|......+ +...++++++|+|++++.++... .+++||++++ .++++.|+++.+.+.+|..
T Consensus 174 -~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 174 -MINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK------NYGTFHCTCK--GICSWYDFAVEIFRLTGID 240 (292)
T ss_dssp -HHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT------CCEEEECCCB--SCEEHHHHHHHHHHHHCCC
T ss_pred -HHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC------CCcEEEecCC--CCccHHHHHHHHHHHhCCC
Confidence 111111122112222 45689999999999999988763 2479999998 7899999999999999865
No 61
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=99.91 E-value=1.9e-25 Score=230.71 Aligned_cols=216 Identities=16% Similarity=0.076 Sum_probs=163.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccC-CCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNV-CENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl-~~~~lGLs~~~~~~l 189 (554)
|+|||||||||||++|+++|++++. + .++.+|+ .+ .+.+..+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-~------------------------------~v~~~d~~~d------~~~l~~~ 43 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-H------------------------------HIFEVHRQTK------EEELESA 43 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-C------------------------------EEEECCTTCC------HHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-C------------------------------EEEEECCCCC------HHHHHHH
Confidence 5799999999999999999999875 1 2355566 44 4888888
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEEeeceecccccceeeccccCCCCCcccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENF 268 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~ 268 (554)
++++|+|||+||..+. +.+..+.++|+.++.+++++|++. +++ +|||+||.++++..
T Consensus 44 ~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~~~-------------------- 101 (369)
T 3st7_A 44 LLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQDN-------------------- 101 (369)
T ss_dssp HHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGSCS--------------------
T ss_pred hccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcCCC--------------------
Confidence 8999999999998764 345667889999999999999985 666 99999999887621
Q ss_pred cccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc-ccccCCCCccceee
Q 042694 269 VSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS-GWMEGNRMMDPIIL 347 (554)
Q Consensus 269 ~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~-g~~~~~~~~~~i~~ 347 (554)
.|..+|..+|.+++.+.++.|++++|+||+.|||+...|.. +++ ..++.
T Consensus 102 ------------------------~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~------~~~~~ 151 (369)
T 3st7_A 102 ------------------------PYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVI------ATFCY 151 (369)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHH------HHHHH
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHH------HHHHH
Confidence 23334666777776655556899999999999998765421 111 11111
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.+..|.... ..+++...+++|+||+|++++.++...... .+++||++++ +++|+.|+++.+.+.+|..
T Consensus 152 ~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~---~~~~~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 152 KIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTI---ENGVPTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp HHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCE---ETTEECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred HHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCccc---CCceEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 122232222 246788899999999999999988764321 1479999998 7999999999999998875
No 62
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=99.91 E-value=2.5e-24 Score=215.60 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=152.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|+++|++| +++.+. +. ..+ +..| +......
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V---~~l~R~---------~~------~~~---~~~~----------~~~~~~l 49 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEV---TLVSRK---------PG------PGR---ITWD----------ELAASGL 49 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEESS---------CC------TTE---EEHH----------HHHHHCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEE---EEEECC---------CC------cCe---eecc----------hhhHhhc
Confidence 579999999999999999999999865 443321 00 011 1112 2223334
Q ss_pred cCccEEEEcCCCC--C----ch-hhHHHHHHHhchHHHHHHHHHHHcC-CCceEEEEeeceecccccceeeccccCCCCC
Q 042694 191 KEVDVIVNSAANT--T----FD-ERYDIAIDINTRGPCRLMEFAKQCN-KLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 191 ~~vdiViH~AA~v--~----~~-~~~~~~~~~Nv~gt~~ll~la~~~~-~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
+++|+|||+|+.. . +. ...+..++.|+.+|++|+++++..+ +.+.|++.||+++|+...+ .+..|+.+
T Consensus 50 ~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~----~~~~E~~p 125 (298)
T 4b4o_A 50 PSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT----AEYDEDSP 125 (298)
T ss_dssp CSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS----CCBCTTCC
T ss_pred cCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC----CcccccCC
Confidence 7899999999742 1 22 3446788999999999999998753 3456999999999997532 22222211
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
. .+.+...... ...| .+......+++++++||+.|||+.. ++...
T Consensus 126 ~-------------~~~~~~~~~~------------~~~e--~~~~~~~~~~~~~~~r~~~v~g~~~----~~~~~---- 170 (298)
T 4b4o_A 126 G-------------GDFDFFSNLV------------TKWE--AAARLPGDSTRQVVVRSGVVLGRGG----GAMGH---- 170 (298)
T ss_dssp C-------------SCSSHHHHHH------------HHHH--HHHCCSSSSSEEEEEEECEEECTTS----HHHHH----
T ss_pred c-------------cccchhHHHH------------HHHH--HHHHhhccCCceeeeeeeeEEcCCC----CchhH----
Confidence 0 1111111111 1111 1222234689999999999999764 22211
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+......|... ..++++..+++|||||+|++++.++..+.. ..+||++++ +++|+.|+++.+.+.+|+++
T Consensus 171 --~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-----~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 171 --MLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEANHV-----HGVLNGVAP--SSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp --HHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-----CEEEEESCS--CCCBHHHHHHHHHHHHTCCC
T ss_pred --HHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhCCCC-----CCeEEEECC--CccCHHHHHHHHHHHhCcCC
Confidence 11111122222 237788899999999999999998876432 369999999 89999999999999999753
No 63
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=99.91 E-value=1.1e-24 Score=221.94 Aligned_cols=257 Identities=16% Similarity=0.180 Sum_probs=161.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEE-Ecchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+|+|||||||||||++|+++|++.|++| ++ .++.. ...+.. .+ ...++.++.+|++++ +
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V---~~~~r~~~~~~~~~~~~~-~~------~~~~~~~~~~Dl~d~------~ 72 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAV---NTTVRDPDNQKKVSHLLE-LQ------ELGDLKIFRADLTDE------L 72 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEE---EEEESCTTCTTTTHHHHH-HG------GGSCEEEEECCTTTS------S
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEE---EEEEcCcchhhhHHHHHh-cC------CCCcEEEEecCCCCh------H
Confidence 6899999999999999999999988754 33 22211 111111 10 124688999999988 6
Q ss_pred HHHHHhcCccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee-ccccc-c---eeecccc
Q 042694 185 LADVIAKEVDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV-NGQRR-G---KVMEKPF 257 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v-~~~~~-~---~i~E~~~ 257 (554)
.+..+++++|+|||+||.+.+. .+.++.+++|+.||.+++++|++.+++++|||+||..+ ++... + .++|...
T Consensus 73 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~ 152 (338)
T 2rh8_A 73 SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNW 152 (338)
T ss_dssp SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence 7777788999999999977543 22345889999999999999998534899999999874 33210 0 1222211
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSGWM 336 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g~~ 336 (554)
... +...... .....|..+|..+|.++..+.+..|++++++||+.|||+...+ .+..+
T Consensus 153 ~~~-------------------~~~~~~~--~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~ 211 (338)
T 2rh8_A 153 TDI-------------------EFLTSAK--PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSI 211 (338)
T ss_dssp TCC----------------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHH
T ss_pred cch-------------------hhccccC--CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchH
Confidence 100 0000000 0000377888888988776654458999999999999986532 11111
Q ss_pred cCCCCccceeeeeccceeeeeecC------CCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHH
Q 042694 337 EGNRMMDPIILYYGKGQLTGFLVD------PNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDL 410 (554)
Q Consensus 337 ~~~~~~~~i~~~~~~G~~~~~~~~------~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~ 410 (554)
. . +.....|....+ ++ +....++++|+|+|++++.++.... ....|+++++ .+++.|+
T Consensus 212 ~------~-~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~~~~~~~~~~---~~s~~e~ 275 (338)
T 2rh8_A 212 G------L-AMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES-----ASGRYICCAA---NTSVPEL 275 (338)
T ss_dssp H------H-HHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT-----CCEEEEECSE---EECHHHH
T ss_pred H------H-HHHHHcCCcccc-ccccccccccCcccEEEHHHHHHHHHHHHcCCC-----cCCcEEEecC---CCCHHHH
Confidence 0 0 000001100000 00 1123489999999999998875422 1357888764 6899999
Q ss_pred HHHHHhHhc
Q 042694 411 ARLLHEHYS 419 (554)
Q Consensus 411 ~~~~~~~~~ 419 (554)
++.+.+.++
T Consensus 276 ~~~l~~~~~ 284 (338)
T 2rh8_A 276 AKFLSKRYP 284 (338)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCC
Confidence 999998765
No 64
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=99.91 E-value=5.9e-24 Score=216.62 Aligned_cols=261 Identities=16% Similarity=0.162 Sum_probs=159.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEE-Ecc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|||||||||||++|+++|+++|++| ++ .++ ....++...... .. ...++.++.||++++ +.+
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V---~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~~~~Dl~d~------~~~ 71 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTV---RATVRDPTNVKKVKHLLDL--PK-AETHLTLWKADLADE------GSF 71 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEE---EEEESCTTCHHHHHHHHTS--TT-HHHHEEEEECCTTST------TTT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEE---EEEECCcchhHHHHHHHhc--cc-CCCeEEEEEcCCCCH------HHH
Confidence 46899999999999999999999988754 43 222 211222211110 00 113688899999988 777
Q ss_pred HHHhcCccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee-ccccc--ceeeccccCCCC
Q 042694 187 DVIAKEVDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV-NGQRR--GKVMEKPFCMGD 261 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v-~~~~~--~~i~E~~~~~~~ 261 (554)
..+++++|+|||+||...+. ++.+..+++|+.||.+++++|.+..++++|||+||..+ ++... ..++|....
T Consensus 72 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~--- 148 (337)
T 2c29_D 72 DEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWS--- 148 (337)
T ss_dssp HHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCC---
T ss_pred HHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCC---
Confidence 78888999999999976542 33456899999999999999998544899999999874 33211 112222110
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccccccCCC
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSGWMEGNR 340 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g~~~~~~ 340 (554)
+.+... ........|..+|..+|.++..+....|++++++||+.|||+...+ ++..+..
T Consensus 149 ----------------~~~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~-- 208 (337)
T 2c29_D 149 ----------------DMEFCR--AKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLIT-- 208 (337)
T ss_dssp ----------------CHHHHH--HHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHH--
T ss_pred ----------------chhhhc--ccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHH--
Confidence 000000 0000000233445666666554444458999999999999986532 1111100
Q ss_pred CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 341 MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 341 ~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
......+.+.. + ... ....+++|+|+|++++.++..... ...|+++++ .+++.|+++.+.+.++
T Consensus 209 ---~~~~~~g~~~~--~-~~~-~~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~~~---~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 209 ---ALSPITGNEAH--Y-SII-RQGQFVHLDDLCNAHIYLFENPKA-----EGRYICSSH---DCIILDLAKMLREKYP 272 (337)
T ss_dssp ---HTHHHHTCGGG--H-HHH-TEEEEEEHHHHHHHHHHHHHCTTC-----CEEEEECCE---EEEHHHHHHHHHHHCT
T ss_pred ---HHHHHcCCCcc--c-ccc-CCCCEEEHHHHHHHHHHHhcCccc-----CceEEEeCC---CCCHHHHHHHHHHHCC
Confidence 00000011100 0 000 123499999999999988754221 347876554 6899999999998764
No 65
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=99.90 E-value=5.6e-24 Score=229.34 Aligned_cols=237 Identities=14% Similarity=0.130 Sum_probs=155.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|++.|++.|+ +|+++.+..- +...+.+|+.+. ....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~---~V~~l~R~~~-----------------~~~~v~~d~~~~--------~~~~ 198 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH---EVIQLVRKEP-----------------KPGKRFWDPLNP--------ASDL 198 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSSC-----------------CTTCEECCTTSC--------CTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCC-----------------Cccceeecccch--------hHHh
Confidence 78999999999999999999999876 5566553210 001267787643 1234
Q ss_pred hcCccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 190 AKEVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
++++|+|||+||.... ......++++|+.||.+++++|.+..++++|||+||+++|+... .+.++.+..+
T Consensus 199 l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~---~~~~~~E~~~--- 272 (516)
T 3oh8_A 199 LDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDR---GDEILTEESE--- 272 (516)
T ss_dssp TTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEE---EEEEECTTSC---
T ss_pred cCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCC---CCCccCCCCC---
Confidence 4689999999998632 34677889999999999999954446889999999999998321 1223333222
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+.+.+... +...|.+...+ ...|++++|+||+.|||+....++.+...
T Consensus 273 -----------~~~~~y~~~------------~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~------- 321 (516)
T 3oh8_A 273 -----------SGDDFLAEV------------CRDWEHATAPA-SDAGKRVAFIRTGVALSGRGGMLPLLKTL------- 321 (516)
T ss_dssp -----------CCSSHHHHH------------HHHHHHTTHHH-HHTTCEEEEEEECEEEBTTBSHHHHHHHT-------
T ss_pred -----------CCcChHHHH------------HHHHHHHHHHH-HhCCCCEEEEEeeEEECCCCChHHHHHHH-------
Confidence 111112111 11222222222 34689999999999999764211111111
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+..|.. ...++++...++|+|||+|++++.++..... ..+||++++ +++++.|+++.+.+.+|.++
T Consensus 322 ---~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-----~g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 322 ---FSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-----SGPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp ---TC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-----CEEEEESCS--CCEEHHHHHHHTTC------
T ss_pred ---HHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc-----CCcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 112222 2346778889999999999999998875432 368999998 79999999999999998754
No 66
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=99.90 E-value=5.4e-23 Score=204.52 Aligned_cols=216 Identities=16% Similarity=0.236 Sum_probs=154.8
Q ss_pred cEEEEecccccccHHHHHHHHhh--CCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT--VPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~--~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
|+|||||||||+|++++++|++. +++ |+++.+. ....+ ...++.++.+|++++ +.+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~l-----------~~~~~~~~~~D~~d~------~~l 60 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ---IIAIVRNVEKASTL-----------ADQGVEVRHGDYNQP------ESL 60 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTTHHH-----------HHTTCEEEECCTTCH------HHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe---EEEEEcCHHHHhHH-----------hhcCCeEEEeccCCH------HHH
Confidence 47999999999999999999987 554 4544332 11111 123678899999987 888
Q ss_pred HHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 187 DVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
..+++++|+|||+|+.. ... ++|+.++.+++++|++ .++++|||+||.+++..
T Consensus 61 ~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~-~~~~~~v~~Ss~~~~~~------------------- 113 (287)
T 2jl1_A 61 QKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARD-AGVKHIAYTGYAFAEES------------------- 113 (287)
T ss_dssp HHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHH-TTCSEEEEEEETTGGGC-------------------
T ss_pred HHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHH-cCCCEEEEECCCCCCCC-------------------
Confidence 99999999999999963 211 6799999999999998 48899999999876421
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
+. .|..+|..+|.+ ....|++++|+||+.++|+.. +.++..
T Consensus 114 ----------~~--------------~y~~~K~~~E~~----~~~~~~~~~ilrp~~~~~~~~---~~~~~~-------- 154 (287)
T 2jl1_A 114 ----------II--------------PLAHVHLATEYA----IRTTNIPYTFLRNALYTDFFV---NEGLRA-------- 154 (287)
T ss_dssp ----------CS--------------THHHHHHHHHHH----HHHTTCCEEEEEECCBHHHHS---SGGGHH--------
T ss_pred ----------CC--------------chHHHHHHHHHH----HHHcCCCeEEEECCEeccccc---hhhHHH--------
Confidence 00 112223334443 334689999999999887431 122211
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
....|... .+.++...++++++|+|++++.++.... ..+++||++++ .++|+.|+++.+.+.+|.+
T Consensus 155 -~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 155 -STESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEG----HENKTYNLVSN--QPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp -HHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSS----CTTEEEEECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred -HhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCC----CCCcEEEecCC--CcCCHHHHHHHHHHHHCCc
Confidence 01123222 2345667899999999999998876432 23589999998 7899999999999999875
No 67
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=99.90 E-value=1.3e-23 Score=207.08 Aligned_cols=225 Identities=14% Similarity=0.097 Sum_probs=160.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+|||||||||||++|+++|++.+. +|++++... ... ...++.++.+|++++ +.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~---~V~~~~r~~-------~~~-----~~~~~~~~~~Dl~d~------~~~~~ 60 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE---ILRLADLSP-------LDP-----AGPNEECVQCDLADA------NAVNA 60 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE---EEEEEESSC-------CCC-----CCTTEEEEECCTTCH------HHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC---EEEEEecCC-------ccc-----cCCCCEEEEcCCCCH------HHHHH
Confidence 368999999999999999999999875 556555321 000 135789999999987 89999
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENF 268 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~ 268 (554)
+.+++|+|||+||.. ..++++..+++|+.||.+++++|++. +.++|||+||..+++.... +.++.+..+
T Consensus 61 ~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~---~~~~~e~~~------ 129 (267)
T 3rft_A 61 MVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQ---TERLGPDVP------ 129 (267)
T ss_dssp HHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBT---TSCBCTTSC------
T ss_pred HHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCC---CCCCCCCCC------
Confidence 999999999999984 45678899999999999999999984 7899999999999875321 112222111
Q ss_pred cccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeee
Q 042694 269 VSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILY 348 (554)
Q Consensus 269 ~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~ 348 (554)
.++.. .|..+|+..|.+++.+..+.|++++++||+.|+|+..
T Consensus 130 -------~~~~~------------~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~------------------- 171 (267)
T 3rft_A 130 -------ARPDG------------LYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN------------------- 171 (267)
T ss_dssp -------CCCCS------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC-------------------
T ss_pred -------CCCCC------------hHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC-------------------
Confidence 01111 2344566677777655555689999999999987411
Q ss_pred eccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 349 YGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 349 ~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+.+...++++++|+++++..++..... ...+++++++ ++.+|.++... +.+|..|
T Consensus 172 -----------~~~~~~~~~~~~d~a~~~~~~~~~~~~----~~~~~~~~s~--~~~~~~~~~~~--~~~g~~p 226 (267)
T 3rft_A 172 -----------NYRMLSTWFSHDDFVSLIEAVFRAPVL----GCPVVWGASA--NDAGWWDNSHL--GFLGWKP 226 (267)
T ss_dssp -----------STTHHHHBCCHHHHHHHHHHHHHCSCC----CSCEEEECCC--CTTCCBCCGGG--GGGCCCC
T ss_pred -----------CCCceeeEEcHHHHHHHHHHHHhCCCC----CceEEEEeCC--CCCCcccChhH--HHCCCCC
Confidence 123346789999999998887765332 2357777777 56666655332 4455444
No 68
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=99.89 E-value=4.5e-23 Score=196.87 Aligned_cols=209 Identities=13% Similarity=0.176 Sum_probs=150.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCC-CCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE-NNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~-~~lGLs~~~~~~l 189 (554)
|+|||||||||+|++++++|++++. +|+++.+.. +... ...++.++.+|+++ + +++..+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~---~V~~~~R~~-----~~~~------~~~~~~~~~~D~~d~~------~~~~~~ 60 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY---QIYAGARKV-----EQVP------QYNNVKAVHFDVDWTP------EEMAKQ 60 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC---EEEEEESSG-----GGSC------CCTTEEEEECCTTSCH------HHHHTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCc-----cchh------hcCCceEEEecccCCH------HHHHHH
Confidence 4799999999999999999999875 556554321 0111 12689999999998 6 889999
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
++++|+|||+|+.... ..+++|+.|+.+++++|++ .++++|||+||.+++.... ..| .+
T Consensus 61 ~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~~~~~~--~~e------~~------- 119 (219)
T 3dqp_A 61 LHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEK-AEVKRFILLSTIFSLQPEK--WIG------AG------- 119 (219)
T ss_dssp TTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHH-TTCCEEEEECCTTTTCGGG--CCS------HH-------
T ss_pred HcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHH-hCCCEEEEECcccccCCCc--ccc------cc-------
Confidence 9999999999998652 3678899999999999998 4889999999987765421 111 00
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
..... .|..+|..+|.+.. +..+++++++||+.++|+... +.. . .
T Consensus 120 ------------~~~~~------~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~---~~~---------~--~ 164 (219)
T 3dqp_A 120 ------------FDALK------DYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEAT---GLI---------D--I 164 (219)
T ss_dssp ------------HHHTH------HHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCC---SEE---------E--E
T ss_pred ------------ccccc------HHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCC---Ccc---------c--c
Confidence 00001 12223344444432 567999999999999986331 110 0 0
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
++...++++++|+|++++.++..... .+++||++++ +.++.|+.+.
T Consensus 165 -----------~~~~~~~i~~~Dva~~i~~~l~~~~~----~g~~~~i~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 165 -----------NDEVSASNTIGDVADTIKELVMTDHS----IGKVISMHNG---KTAIKEALES 210 (219)
T ss_dssp -----------SSSCCCCEEHHHHHHHHHHHHTCGGG----TTEEEEEEEC---SEEHHHHHHT
T ss_pred -----------CCCcCCcccHHHHHHHHHHHHhCccc----cCcEEEeCCC---CccHHHHHHH
Confidence 14567899999999999998876433 2589999987 5788887653
No 69
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=99.89 E-value=8.6e-23 Score=197.24 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=149.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcE-EEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKL-VPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv-~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+|||||||||++++++|++++. +|+++.+. ..+.+. ..++ .++.+|++ +
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~~~~~-----------~~~~~~~~~~Dl~--------~ 76 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNEEQGPELR-----------ERGASDIVVANLE--------E 76 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSGGGHHHHH-----------HTTCSEEEECCTT--------S
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECChHHHHHHH-----------hCCCceEEEcccH--------H
Confidence 6789999999999999999999999886 45554432 122211 2367 88999998 2
Q ss_pred HHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 185 LADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
.+...++++|+|||+||.... +.++..+++|+.|+.+++++|++. ++++||++||...... +.
T Consensus 77 ~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~------~~--------- 139 (236)
T 3e8x_A 77 DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP------DQ--------- 139 (236)
T ss_dssp CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG------GG---------
T ss_pred HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC------CC---------
Confidence 334456799999999997654 567888999999999999999984 7899999999543321 10
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
.+ ..... |..+|..+|...+..|++++++||+.|+|+... +.
T Consensus 140 ------------~~----~~~~~----------Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~---~~--------- 181 (236)
T 3e8x_A 140 ------------GP----MNMRH----------YLVAKRLADDELKRSSLDYTIVRPGPLSNEEST---GK--------- 181 (236)
T ss_dssp ------------SC----GGGHH----------HHHHHHHHHHHHHHSSSEEEEEEECSEECSCCC---SE---------
T ss_pred ------------Ch----hhhhh----------HHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCC---Ce---------
Confidence 00 00011 223344444444467999999999999986431 11
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
... ..+.....++++++|+|++++.++..... .+++||++++ ++++.|+++.+.
T Consensus 182 ---------~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 182 ---------VTV-SPHFSEITRSITRHDVAKVIAELVDQQHT----IGKTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp ---------EEE-ESSCSCCCCCEEHHHHHHHHHHHTTCGGG----TTEEEEEEEC---SEEHHHHHHTC-
T ss_pred ---------EEe-ccCCCcccCcEeHHHHHHHHHHHhcCccc----cCCeEEEeCC---CcCHHHHHHHhc
Confidence 000 12233457899999999999998866432 3589999987 589999988654
No 70
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=99.89 E-value=1.4e-23 Score=206.82 Aligned_cols=224 Identities=14% Similarity=0.105 Sum_probs=160.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++|+++|++.+. +|+++++... .. ...++.++.+|++++ +.+..+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~-------~~-----~~~~~~~~~~Dl~d~------~~~~~~ 60 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAH---EVRLSDIVDL-------GA-----AEAHEEIVACDLADA------QAVHDL 60 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEE---EEEECCSSCC-------CC-----CCTTEEECCCCTTCH------HHHHHH
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCCc-------cc-----cCCCccEEEccCCCH------HHHHHH
Confidence 46899999999999999999998764 6676654211 00 124678899999987 888888
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
++++|+|||+|+... .+.++..+++|+.|+.+++++|++ .++++|||+||.++++.... +.++++.++.
T Consensus 61 ~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~~~~~~~---~~~~~E~~~~------ 129 (267)
T 3ay3_A 61 VKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARN-LGKPRIVFASSNHTIGYYPR---TTRIDTEVPR------ 129 (267)
T ss_dssp HTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHH-TTCCEEEEEEEGGGSTTSBT---TSCBCTTSCC------
T ss_pred HcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCHHHhCCCCC---CCCCCCCCCC------
Confidence 899999999999763 356778899999999999999998 47899999999999876321 1222222211
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
.+.. .|..+|..+|.++..+....+++++++||+.||+. | .
T Consensus 130 -------~~~~------------~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~---~--~--------------- 170 (267)
T 3ay3_A 130 -------RPDS------------LYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK---P--K--------------- 170 (267)
T ss_dssp -------CCCS------------HHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS---C--C---------------
T ss_pred -------CCCC------------hHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC---C--C---------------
Confidence 1111 23334566666665554556899999999999842 1 0
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+++...++++++|+|++++.++..... ...+||+.++ .+.+|.++.+. +.+|..|
T Consensus 171 ----------~~~~~~~~~~~~dva~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 171 ----------DARMMATWLSVDDFMRLMKRAFVAPKL----GCTVVYGASA--NTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp ----------SHHHHHHBCCHHHHHHHHHHHHHSSCC----CEEEEEECCS--CSSCCBCCGGG--GGGCCCC
T ss_pred ----------CCCeeeccccHHHHHHHHHHHHhCCCC----CceeEecCCC--ccccccCHHHH--HHcCCCC
Confidence 011236789999999999988765321 2478998887 56778777766 6666544
No 71
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=99.88 E-value=3.8e-22 Score=196.78 Aligned_cols=224 Identities=18% Similarity=0.158 Sum_probs=155.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++++++|++ ++ +|+++.+..- . . .+ +.+|++++ +.+..++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~---~V~~~~r~~~------~-~-------~~---~~~Dl~~~------~~~~~~~ 53 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RH---EVIKVYNSSE------I-Q-------GG---YKLDLTDF------PRLEDFI 53 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TS---CEEEEESSSC------C-T-------TC---EECCTTSH------HHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CC---eEEEecCCCc------C-C-------CC---ceeccCCH------HHHHHHH
Confidence 4799999999999999999995 64 4555543210 0 0 12 78999987 7787777
Q ss_pred cC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 191 KE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 191 ~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
++ +|+|||+||..... ++++..+++|+.|+.+++++|++. +. +|||+||.++++...+.+.| .++.
T Consensus 54 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~e-----~~~~-- 124 (273)
T 2ggs_A 54 IKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNYKE-----EDIP-- 124 (273)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSBCT-----TSCC--
T ss_pred HhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCcCC-----CCCC--
Confidence 75 99999999987753 567889999999999999999984 55 89999999998764322222 1110
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+. ..|..+|..+|..... ++++++||+.|+| ..++..++
T Consensus 125 -----------~~~----------------~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~G--~~~~~~~~--------- 164 (273)
T 2ggs_A 125 -----------NPI----------------NYYGLSKLLGETFALQ--DDSLIIRTSGIFR--NKGFPIYV--------- 164 (273)
T ss_dssp -----------CCS----------------SHHHHHHHHHHHHHCC--TTCEEEEECCCBS--SSSHHHHH---------
T ss_pred -----------CCC----------------CHHHHHHHHHHHHHhC--CCeEEEecccccc--ccHHHHHH---------
Confidence 011 1233444555554433 7899999999998 22222221
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+.....|......++ ..++++++|+|++++.++.... .++||+++ +++++.|+++.+.+.+|..+
T Consensus 165 ~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~------~g~~~i~~---~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 165 YKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK------TGIIHVAG---ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp HHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC------CEEEECCC---CCEEHHHHHHHHHHHTTCCS
T ss_pred HHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc------CCeEEECC---CcccHHHHHHHHHHHhCCCh
Confidence 011112221122222 6799999999999999886532 35999987 48999999999999998753
No 72
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.87 E-value=5.2e-22 Score=193.21 Aligned_cols=233 Identities=14% Similarity=0.104 Sum_probs=159.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+|||||||+|++++++|++.++.. +|+++.+.. +++.. ...++.++.+|++++ +.+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~-~~~~~---------~~~~~~~~~~D~~d~------~~~~~ 65 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSA-QGKEK---------IGGEADVFIGDITDA------DSINP 65 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCH-HHHHH---------TTCCTTEEECCTTSH------HHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCC-Cchhh---------cCCCeeEEEecCCCH------HHHHH
Confidence 46899999999999999999999983222 566665432 22211 123567899999987 88999
Q ss_pred HhcCccEEEEcCCCCCch----------------hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee
Q 042694 189 IAKEVDVIVNSAANTTFD----------------ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~----------------~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i 252 (554)
+.+++|+|||+|+..... +......++|+.++.+++++|++. ++++|||+||.+++....
T Consensus 66 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~--- 141 (253)
T 1xq6_A 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDH--- 141 (253)
T ss_dssp HHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTC---
T ss_pred HHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCCC---
Confidence 999999999999975421 112346789999999999999985 789999999987642210
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF 332 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~ 332 (554)
+ .. .|.. ..|..+|..+|......|++++++||+.++|+....
T Consensus 142 ---------~----------------~~------~~~~-----~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~- 184 (253)
T 1xq6_A 142 ---------P----------------LN------KLGN-----GNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV- 184 (253)
T ss_dssp ---------G----------------GG------GGGG-----CCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSS-
T ss_pred ---------c----------------cc------cccc-----hhHHHHHHHHHHHHHhCCCceEEEecceeecCCcch-
Confidence 0 00 0000 113334555555554579999999999999965321
Q ss_pred cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCC-CcccHHHHH
Q 042694 333 SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVV-NPLVFQDLA 411 (554)
Q Consensus 333 ~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~-~~it~~e~~ 411 (554)
. ..+...... ++. ...++++++|+|++++.++..... .+++||++++.. +++++.|++
T Consensus 185 ---~-------~~~~~~~~~----~~~---~~~~~~~~~Dva~~~~~~~~~~~~----~g~~~~i~~~~~~~~~s~~e~~ 243 (253)
T 1xq6_A 185 ---R-------ELLVGKDDE----LLQ---TDTKTVPRADVAEVCIQALLFEEA----KNKAFDLGSKPEGTSTPTKDFK 243 (253)
T ss_dssp ---S-------CEEEESTTG----GGG---SSCCEEEHHHHHHHHHHHTTCGGG----TTEEEEEEECCTTTSCCCCCHH
T ss_pred ---h-------hhhccCCcC----CcC---CCCcEEcHHHHHHHHHHHHcCccc----cCCEEEecCCCcCCCCCHHHHH
Confidence 0 111100110 111 125689999999999988765332 357999998731 469999999
Q ss_pred HHHHhHhcc
Q 042694 412 RLLHEHYSA 420 (554)
Q Consensus 412 ~~~~~~~~~ 420 (554)
+.+.+.+|+
T Consensus 244 ~~~~~~~g~ 252 (253)
T 1xq6_A 244 ALFSQVTSR 252 (253)
T ss_dssp HHHHTCCCC
T ss_pred HHHHHHhCC
Confidence 999998875
No 73
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.87 E-value=5.4e-22 Score=197.58 Aligned_cols=217 Identities=14% Similarity=0.111 Sum_probs=152.1
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
|+|||||||||+|++++++|++. +.+| +++.+..- .. ......++.++.+|++++ +.+..+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V---~~~~R~~~-----~~----~~~~~~~v~~~~~D~~d~------~~l~~~ 62 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHF---HIGVRNVE-----KV----PDDWRGKVSVRQLDYFNQ------ESMVEA 62 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTE---EEEESSGG-----GS----CGGGBTTBEEEECCTTCH------HHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcE---EEEECCHH-----HH----HHhhhCCCEEEEcCCCCH------HHHHHH
Confidence 47999999999999999998886 6544 44432210 01 111345889999999988 889999
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
++++|+|||+|+..... ..|+.++++++++|++ .++++|||+||...... .++
T Consensus 63 ~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~-~gv~~iv~~Ss~~~~~~-------~~~------------ 115 (289)
T 3e48_A 63 FKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQHN-------NPF------------ 115 (289)
T ss_dssp TTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHH-TTCCEEEEEEESCCSTT-------CCS------------
T ss_pred HhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHH-cCCCEEEEEcccCCCCC-------CCC------------
Confidence 99999999999976543 3488999999999999 47999999999432110 000
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
+ .+++. ..+|......|++++|+||+.++|+.. .|.... .
T Consensus 116 -------~------------------~~~~~--~~~e~~~~~~g~~~~ilrp~~~~~~~~----~~~~~~---------~ 155 (289)
T 3e48_A 116 -------H------------------MSPYF--GYASRLLSTSGIDYTYVRMAMYMDPLK----PYLPEL---------M 155 (289)
T ss_dssp -------T------------------THHHH--HHHHHHHHHHCCEEEEEEECEESTTHH----HHHHHH---------H
T ss_pred -------c------------------cchhH--HHHHHHHHHcCCCEEEEeccccccccH----HHHHHH---------H
Confidence 0 00000 011222223589999999999988532 222110 0
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
..+.. ..+.++...++++++|+|++++.++...... +++||++ + .++|+.|+++.+.+.+|++
T Consensus 156 ~~~~~--~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~----g~~~~~~-~--~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 156 NMHKL--IYPAGDGRINYITRNDIARGVIAIIKNPDTW----GKRYLLS-G--YSYDMKELAAILSEASGTE 218 (289)
T ss_dssp HHTEE--CCCCTTCEEEEECHHHHHHHHHHHHHCGGGT----TCEEEEC-C--EEEEHHHHHHHHHHHHTSC
T ss_pred HCCCE--ecCCCCceeeeEEHHHHHHHHHHHHcCCCcC----CceEEeC-C--CcCCHHHHHHHHHHHHCCc
Confidence 11211 1244677789999999999999988764431 5799999 7 7999999999999999974
No 74
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=99.87 E-value=2.2e-21 Score=198.48 Aligned_cols=230 Identities=17% Similarity=0.145 Sum_probs=155.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++|||||||||+|++|++.|++.+++ |+++.+.. .++.... ......++.++.||+.++ +.+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~-----~~l~~~~v~~~~~Dl~d~------~~l 75 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRP---TYILARPGPRSPSKAKIF-----KALEDKGAIIVYGLINEQ------EAM 75 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCC---EEEEECSSCCCHHHHHHH-----HHHHHTTCEEEECCTTCH------HHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCC---EEEEECCCCCChhHHHHH-----HHHHhCCcEEEEeecCCH------HHH
Confidence 568999999999999999999998865 44443211 1122110 011235789999999987 888
Q ss_pred HHHhc--CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 187 DVIAK--EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
..+++ ++|+|||+||. .|+.++.+++++|++.+++++||+ |+ ++.. .+|. .+
T Consensus 76 ~~~~~~~~~d~Vi~~a~~------------~n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~---~~e~-----~~-- 129 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGG------------ESILDQIALVKAMKAVGTIKRFLP-SE---FGHD---VNRA-----DP-- 129 (346)
T ss_dssp HHHHHHTTCCEEEECCCG------------GGGGGHHHHHHHHHHHCCCSEEEC-SC---CSSC---TTTC-----CC--
T ss_pred HHHHhhCCCCEEEECCch------------hhHHHHHHHHHHHHHcCCceEEee-cc---cCCC---CCcc-----Cc--
Confidence 88888 99999999997 399999999999999644999986 42 3321 1110 00
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
.++ ... |..+|..+|.+.+..|++++|+||+.++|... +++.. +
T Consensus 130 -----------~~p------~~~----------y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~---~~~~~------~ 173 (346)
T 3i6i_A 130 -----------VEP------GLN----------MYREKRRVRQLVEESGIPFTYICCNSIASWPY---YNNIH------P 173 (346)
T ss_dssp -----------CTT------HHH----------HHHHHHHHHHHHHHTTCCBEEEECCEESSCCC---SCC---------
T ss_pred -----------CCC------cch----------HHHHHHHHHHHHHHcCCCEEEEEecccccccC---ccccc------c
Confidence 000 011 22334444544445799999999999998543 22211 1
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.......+.+ .++++++...++++++|+|++++.++..+.. .+++||++++. +++|+.|+++.+.+.+|+.
T Consensus 174 ~~~~~~~~~~-~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~i~g~~-~~~s~~e~~~~~~~~~g~~ 244 (346)
T 3i6i_A 174 SEVLPPTDFF-QIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT----LNKSVHFRPSC-NCLNINELASVWEKKIGRT 244 (346)
T ss_dssp --CCCCSSCE-EEETTSCCCEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCGG-GEECHHHHHHHHHHHHTSC
T ss_pred ccccCCCceE-EEccCCCceEEecCHHHHHHHHHHHHhCccc----cCeEEEEeCCC-CCCCHHHHHHHHHHHHCCC
Confidence 0011112232 3457788889999999999999998866432 24789988422 6899999999999999975
No 75
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=99.87 E-value=5.2e-22 Score=197.16 Aligned_cols=212 Identities=16% Similarity=0.187 Sum_probs=148.1
Q ss_pred EEEEecccccccHHHHHHHHhh--CCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRT--VPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~--~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|||||||||+|++++++|++. +++ |+++.+. ....+ ...++.++.+|++++ +.+.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~d~------~~~~ 60 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ---IVAIVRNPAKAQAL-----------AAQGITVRQADYGDE------AALT 60 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTCHHH-----------HHTTCEEEECCTTCH------HHHH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce---EEEEEcChHhhhhh-----------hcCCCeEEEcCCCCH------HHHH
Confidence 4899999999999999999987 554 4444322 11111 123678899999987 8888
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
.+++++|+|||+|+.. . ..|+.++++++++|++. ++++|||+||.+++..
T Consensus 61 ~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-------------------- 110 (286)
T 2zcu_A 61 SALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTS-------------------- 110 (286)
T ss_dssp HHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTTC--------------------
T ss_pred HHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC--------------------
Confidence 9999999999999852 1 25899999999999985 7899999999877511
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
+. .|..+|..+|.++. ..+++++|+||+.++++.. .++..
T Consensus 111 ---------~~--------------~y~~sK~~~e~~~~----~~~~~~~ilrp~~~~~~~~----~~~~~--------- 150 (286)
T 2zcu_A 111 ---------PL--------------GLADEHIETEKMLA----DSGIVYTLLRNGWYSENYL----ASAPA--------- 150 (286)
T ss_dssp ---------CS--------------TTHHHHHHHHHHHH----HHCSEEEEEEECCBHHHHH----TTHHH---------
T ss_pred ---------cc--------------hhHHHHHHHHHHHH----HcCCCeEEEeChHHhhhhH----HHhHH---------
Confidence 00 22233444444433 3589999999988766321 11110
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
....|.+. .++++...++++++|+|++++.++..+.. .+++||++++ .++|+.|+++.+.+.+|++
T Consensus 151 ~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 151 ALEHGVFI--GAAGDGKIASATRADYAAAAARVISEAGH----EGKVYELAGD--SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp HHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHHSSSC----TTCEEEECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred hhcCCcee--ccCCCCccccccHHHHHHHHHHHhcCCCC----CCceEEEeCC--CcCCHHHHHHHHHHHHCCC
Confidence 01123332 24556778999999999999988765322 3579999998 7899999999999999874
No 76
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.87 E-value=1e-21 Score=187.92 Aligned_cols=215 Identities=10% Similarity=0.022 Sum_probs=139.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|++++. +|+++.+.. +.+... ...++.++.+|++++ +. ...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~-~~~~~~--------~~~~~~~~~~D~~d~------~~--~~~ 60 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH---EVLAVVRDP-QKAADR--------LGATVATLVKEPLVL------TE--ADL 60 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHH--------TCTTSEEEECCGGGC------CH--HHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC---EEEEEEecc-cccccc--------cCCCceEEecccccc------cH--hhc
Confidence 4799999999999999999999876 455554331 222221 234788999999998 33 556
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
+++|+|||+|+...... ....|+.++++++++|++. + ++||++||++++....+. ....+.++..
T Consensus 61 ~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~-~~~~~~~~~~-------- 125 (224)
T 3h2s_A 61 DSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD-HPMILDFPES-------- 125 (224)
T ss_dssp TTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS-SCGGGGCCGG--------
T ss_pred ccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC-ccccccCCCC--------
Confidence 79999999999862111 2467999999999999985 6 999999998665432210 0001111000
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
+ .+.. .|..+|..+|.+. ...+..+++++++||+.|+|+.. ..++. .+
T Consensus 126 --~---~~~~------------~y~~sK~~~e~~~-~~~~~~~i~~~ivrp~~v~g~~~--~~~~~------------~~ 173 (224)
T 3h2s_A 126 --A---ASQP------------WYDGALYQYYEYQ-FLQMNANVNWIGISPSEAFPSGP--ATSYV------------AG 173 (224)
T ss_dssp --G---GGST------------THHHHHHHHHHHH-HHTTCTTSCEEEEEECSBCCCCC--CCCEE------------EE
T ss_pred --C---ccch------------hhHHHHHHHHHHH-HHHhcCCCcEEEEcCccccCCCc--ccCce------------ec
Confidence 0 0011 2333455555432 23345699999999999999622 12211 01
Q ss_pred cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 351 KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 351 ~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+ ..++...++++++|+|++++.++..+.. .+++|++++.
T Consensus 174 ~~~~----~~~~~~~~~i~~~DvA~~~~~~l~~~~~----~g~~~~~~~~ 215 (224)
T 3h2s_A 174 KDTL----LVGEDGQSHITTGNMALAILDQLEHPTA----IRDRIVVRDA 215 (224)
T ss_dssp SSBC----CCCTTSCCBCCHHHHHHHHHHHHHSCCC----TTSEEEEEEC
T ss_pred cccc----ccCCCCCceEeHHHHHHHHHHHhcCccc----cCCEEEEecC
Confidence 1111 1133446899999999999999876443 3589999987
No 77
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.86 E-value=2.1e-21 Score=185.10 Aligned_cols=220 Identities=14% Similarity=0.103 Sum_probs=132.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||+|++|+++|++++. +|+++.+.. +++... ..++.++.+|++++ +. ..+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~-~~~~~~---------~~~~~~~~~D~~d~------~~--~~~ 59 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNA-GKITQT---------HKDINILQKDIFDL------TL--SDL 59 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCS-HHHHHH---------CSSSEEEECCGGGC------CH--HHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCc-hhhhhc---------cCCCeEEeccccCh------hh--hhh
Confidence 5799999999999999999999886 455554321 112111 14788999999998 33 455
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
+++|+|||+|+.... ....|+.++++++++|++. +.+++|++||..++....+ ..+..+..+
T Consensus 60 ~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~~~~~-------- 121 (221)
T 3ew7_A 60 SDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDED---GNTLLESKG-------- 121 (221)
T ss_dssp TTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC---------------------------
T ss_pred cCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCC---CccccccCC--------
Confidence 799999999998432 2467999999999999984 6899999999877544221 001100000
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
......|..+|..+|.+.....+..+++++|+||+.++|+.. ..+... .+
T Consensus 122 -----------------~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~--~~~~~~-----------~~ 171 (221)
T 3ew7_A 122 -----------------LREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE--RTGDYQ-----------IG 171 (221)
T ss_dssp --------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC----------------------
T ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCC--ccCceE-----------ec
Confidence 000114666777777763222115799999999999999621 111110 01
Q ss_pred cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHH
Q 042694 351 KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQD 409 (554)
Q Consensus 351 ~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e 409 (554)
...+. ..+++ .++++++|+|++++.++..+.. .+++||++++ .+.+..|
T Consensus 172 ~~~~~-~~~~~---~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~~~--~~~~~~~ 220 (221)
T 3ew7_A 172 KDHLL-FGSDG---NSFISMEDYAIAVLDEIERPNH----LNEHFTVAGK--LEHHHHH 220 (221)
T ss_dssp ----------------CCCHHHHHHHHHHHHHSCSC----TTSEEECCC----------
T ss_pred cccce-ecCCC---CceEeHHHHHHHHHHHHhCccc----cCCEEEECCC--Ccccccc
Confidence 11111 11111 3689999999999999876443 3589999998 5555443
No 78
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.86 E-value=6e-21 Score=191.04 Aligned_cols=229 Identities=11% Similarity=0.045 Sum_probs=155.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+|||||||+|++++++|++.+ . +|+++.+.. -..... ....++.++.+|+.++ +.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~R~~~~~~~~~--------l~~~~~~~~~~D~~d~------~~l~ 67 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF---KVRVVTRNPRKKAAKE--------LRLQGAEVVQGDQDDQ------VIME 67 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS---EEEEEESCTTSHHHHH--------HHHTTCEEEECCTTCH------HHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc---eEEEEEcCCCCHHHHH--------HHHCCCEEEEecCCCH------HHHH
Confidence 4789999999999999999999987 4 455554321 111110 0124678899999987 8899
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
.+++++|+|||+|+... . .....|+.++++++++|++. ++++|||+||..+++...+
T Consensus 68 ~~~~~~d~vi~~a~~~~---~--~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~----------------- 124 (299)
T 2wm3_A 68 LALNGAYATFIVTNYWE---S--CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAG----------------- 124 (299)
T ss_dssp HHHTTCSEEEECCCHHH---H--TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTT-----------------
T ss_pred HHHhcCCEEEEeCCCCc---c--ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCC-----------------
Confidence 99999999999997421 1 12356889999999999984 8999999888766543110
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
.+...|..+|..+|......|++++|+||+.++|+... .+...
T Consensus 125 -------------------------~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~---~~~~~--------- 167 (299)
T 2wm3_A 125 -------------------------RLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLS---HFLPQ--------- 167 (299)
T ss_dssp -------------------------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGT---TTCCE---------
T ss_pred -------------------------cccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchh---hcCCc---------
Confidence 00111223344445444445899999999999985432 11110
Q ss_pred eecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 348 YYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 348 ~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
....|.. ....+.++...++++++|++++++.++..+.. ..+++||++++ ++|+.|+++.+.+.+|++
T Consensus 168 ~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~g~~~~~~g~---~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 168 KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK---YVGQNIGLSTC---RHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH---HTTCEEECCSE---EECHHHHHHHHHHHHSSC
T ss_pred ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh---hCCeEEEeeec---cCCHHHHHHHHHHHHCCC
Confidence 0112211 01112356778999999999999988765321 12479999864 799999999999999975
No 79
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.85 E-value=4.4e-20 Score=189.14 Aligned_cols=229 Identities=14% Similarity=0.038 Sum_probs=153.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCchhhhccCcEEEEEcc-CCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKSYQAFMLSKLVPAVGN-VCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GD-l~~~~lGLs~~~~~ 187 (554)
+|+|+|||||||+|++|+++|++++++| +++.+ ..-....... ...++.++.|| ++++ +.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V---~~~~R~~~~~~~~~l~-------~~~~v~~v~~D~l~d~------~~l~ 68 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHV---RAQVHSLKGLIAEELQ-------AIPNVTLFQGPLLNNV------PLMD 68 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCE---EEEESCSCSHHHHHHH-------TSTTEEEEESCCTTCH------HHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEE---EEEECCCChhhHHHHh-------hcCCcEEEECCccCCH------HHHH
Confidence 5789999999999999999999987654 44322 1111001100 12368899999 9887 8888
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCC-CceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNK-LKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
.+++++|+|||+++.... ..|+.+ ++++++|++. + +++|||+||.++... ...
T Consensus 69 ~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~----------~~~------ 122 (352)
T 1xgk_A 69 TLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLY----------GPW------ 122 (352)
T ss_dssp HHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGT----------SSC------
T ss_pred HHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCcccccc----------CCC------
Confidence 888999999999986421 347776 9999999985 6 899999999863110 000
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
+. . .|..+|..+|.++ ...+++++|+||+ +||+... +.. .+++
T Consensus 123 ----------~~-~------------~y~~sK~~~E~~~----~~~gi~~~ivrpg-~~g~~~~---~~~------~~~~ 165 (352)
T 1xgk_A 123 ----------PA-V------------PMWAPKFTVENYV----RQLGLPSTFVYAG-IYNNNFT---SLP------YPLF 165 (352)
T ss_dssp ----------CC-C------------TTTHHHHHHHHHH----HTSSSCEEEEEEC-EEGGGCB---SSS------CSSC
T ss_pred ----------CC-c------------cHHHHHHHHHHHH----HHcCCCEEEEecc-eecCCch---hcc------cccc
Confidence 00 0 2333444444444 3458999999988 5665432 110 0111
Q ss_pred e--eeccceee-eeecCCCcccccchh-hHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 L--YYGKGQLT-GFLVDPNGILDVVPA-DMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~--~~~~G~~~-~~~~~~~~~~d~vpV-D~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
. ....|... .++++++...+++++ ||+|++++.++..... ...+++||++++ ++|+.|+++.+.+..|+++
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~--~~~g~~~~l~~~---~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 166 QMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ--KWNGHRIALTFE---TLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp BEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH--HHTTCEEEECSE---EECHHHHHHHHHHHHTSCE
T ss_pred cccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCch--hhCCeEEEEecC---CCCHHHHHHHHHHHHCCCC
Confidence 1 11334432 335667788999999 9999999998875311 002479999953 7999999999999999753
No 80
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.84 E-value=3.6e-20 Score=186.37 Aligned_cols=236 Identities=14% Similarity=0.137 Sum_probs=153.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|||||||+|+++++.|++.+.+ |+++.+.. .++..... .....++.++.||+.++ +.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~d~------~~ 69 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLL-----YFKQLGAKLIEASLDDH------QR 69 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHHHHHHHH-----HHHTTTCEEECCCSSCH------HH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchhHHHHHH-----HHHhCCeEEEeCCCCCH------HH
Confidence 578999999999999999999998764 45544321 11211100 01134688999999987 88
Q ss_pred HHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 186 ADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ |+ ++...... + .+.
T Consensus 70 l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~~-~------~~~-- 128 (313)
T 1qyd_A 70 LVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPDIM-E------HAL-- 128 (313)
T ss_dssp HHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTTSC-C------CCC--
T ss_pred HHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCcccc-c------cCC--
Confidence 888899999999999976542 489999999999998533999985 42 33211100 0 000
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+.. . . | .+|..+|...+..|++++|+||+.+++.....+.... .
T Consensus 129 ----------~p~~------~------~----y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~-------~- 173 (313)
T 1qyd_A 129 ----------QPGS------I------T----F-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLD-------G- 173 (313)
T ss_dssp ----------SSTT------H------H----H-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTT-------C-
T ss_pred ----------CCCc------c------h----H-HHHHHHHHHHHhcCCCeEEEEeceecccccccccccc-------c-
Confidence 0000 0 1 1 2334445444456899999999999885332111100 0
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
......+.+ .++++++...++++++|++++++.++..+.. .+++|+++++. +++|+.|+++.+.+..|+.
T Consensus 174 ~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~ 243 (313)
T 1qyd_A 174 HMMPPRDKV-LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT----LNKTMYIRPPM-NILSQKEVIQIWERLSEQN 243 (313)
T ss_dssp CSSCCSSEE-CCBTTSCSEEEEECHHHHHHHHHHHTTCGGG----SSSEEECCCGG-GEEEHHHHHHHHHHHHTCC
T ss_pred cccCCCCeE-EEeCCCCceEEEEEHHHHHHHHHHHHhCccc----CCceEEEeCCC-CccCHHHHHHHHHHhcCCC
Confidence 000111222 2335677789999999999999988765432 24677776531 5899999999999999975
No 81
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.84 E-value=5.4e-21 Score=181.51 Aligned_cols=207 Identities=16% Similarity=0.108 Sum_probs=144.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+|+|+|||||||+|++++++|+++++ ..+|+++.+.... ...++.++.+|+.++ +.+..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~------~~~~~ 63 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALA-------------EHPRLDNPVGPLAEL------LPQLD 63 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCC-------------CCTTEECCBSCHHHH------GGGCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCcc-------------cCCCceEEeccccCH------HHHHH
Confidence 357999999999999999999999875 1256655432110 124788899999876 55544
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
+. +|+|||+|+.... .++++..+++|+.++.+++++|++. ++++|||+||..+++...
T Consensus 64 ~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~------------------ 122 (215)
T 2a35_A 64 GS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKSS------------------ 122 (215)
T ss_dssp SC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS------------------
T ss_pred hh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCCCc------------------
Confidence 44 9999999997653 3467888999999999999999984 789999999988765310
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCc-EEEEccceeeecccCCccccccCCCCcccee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIP-VVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp-~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
..|..+|..+|...+..+++ ++++||+.++|+... +.+.....
T Consensus 123 ----------------------------~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~--~~~~~~~~------ 166 (215)
T 2a35_A 123 ----------------------------IFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREE--FRLAEILA------ 166 (215)
T ss_dssp ----------------------------SHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSC--EEGGGGTT------
T ss_pred ----------------------------cHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCc--chHHHHHH------
Confidence 01223344455544456899 999999999997653 22222211
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHH
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQ 408 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~ 408 (554)
....+ + . +...++++++|+|++++.++.... +++||++++ +++++.
T Consensus 167 ----~~~~~-~-~--~~~~~~i~~~Dva~~~~~~~~~~~------~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 167 ----APIAR-I-L--PGKYHGIEACDLARALWRLALEEG------KGVRFVESD--ELRKLG 212 (215)
T ss_dssp ----CCCC--------CHHHHHHHHHHHHHHHHHHTCCC------SEEEEEEHH--HHHHHH
T ss_pred ----Hhhhh-c-c--CCCcCcEeHHHHHHHHHHHHhcCC------CCceEEcHH--HHHHhh
Confidence 01111 1 1 125789999999999999876432 579999987 555554
No 82
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.82 E-value=4.1e-19 Score=178.14 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=148.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-----H-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-----F-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|||||||+|+++++.|++++++| +++.+.. . ++..... .....++.++.+|+.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V---~~~~R~~~~~~~~~~~~~~~~-----~l~~~~v~~v~~D~~d~------ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPT---YALVRKTITAANPETKEELID-----NYQSLGVILLEGDINDH------ 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCE---EEEECCSCCSSCHHHHHHHHH-----HHHHTTCEEEECCTTCH------
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcE---EEEECCCcccCChHHHHHHHH-----HHHhCCCEEEEeCCCCH------
Confidence 5789999999999999999999998754 3333221 0 2211100 01124678899999987
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ ++... +|. ...
T Consensus 68 ~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~---~~~-----~~~ 123 (307)
T 2gas_A 68 ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV---DRH-----DAV 123 (307)
T ss_dssp HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT---TSC-----CCC
T ss_pred HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc---ccc-----cCC
Confidence 888899999999999999754 6788999999998533899983 32 33211 110 000
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+ . ... | .+|..+|...+..+++++++||+.+++... +.+... .
T Consensus 124 -------------~p---~--~~~------y-----~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~---~~~~~~----~ 167 (307)
T 2gas_A 124 -------------EP---V--RQV------F-----EEKASIRRVIEAEGVPYTYLCCHAFTGYFL---RNLAQL----D 167 (307)
T ss_dssp -------------TT---H--HHH------H-----HHHHHHHHHHHHHTCCBEEEECCEETTTTG---GGTTCT----T
T ss_pred -------------Cc---c--hhH------H-----HHHHHHHHHHHHcCCCeEEEEcceeecccc---cccccc----c
Confidence 00 0 011 1 223334444444589999999999987432 121110 0
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
......+.+ .++++++...++++++|++++++.++..+.. .+++|++.++. +++|+.|+++.+.+..|+.
T Consensus 168 --~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 168 --ATDPPRDKV-VILGDGNVKGAYVTEADVGTFTIRAANDPNT----LNKAVHIRLPK-NYLTQNEVIALWEKKIGKT 237 (307)
T ss_dssp --CSSCCSSEE-EEETTSCSEEEEECHHHHHHHHHHHHTCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHHTSC
T ss_pred --cccCCCCeE-EEecCCCcceEEeeHHHHHHHHHHHHcCccc----cCceEEEeCCC-CcCCHHHHHHHHHHHhCCC
Confidence 000011222 2345667789999999999999998865432 24677776531 5899999999999999875
No 83
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.81 E-value=3.4e-19 Score=178.80 Aligned_cols=230 Identities=14% Similarity=0.180 Sum_probs=149.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|||||||+|+++++.|++++++| +++.+.. .++.... ......++.++.+|+.++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V---~~l~R~~~~~~~~~~~~~~-----~~l~~~~v~~v~~D~~d~------~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPT---FLLVRESTASSNSEKAQLL-----ESFKASGANIVHGSIDDH------A 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCE---EEECCCCCTTTTHHHHHHH-----HHHHTTTCEEECCCTTCH------H
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCE---EEEECCcccccCHHHHHHH-----HHHHhCCCEEEEeccCCH------H
Confidence 5789999999999999999999988654 4443321 1111110 011234788999999987 8
Q ss_pred HHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 185 LADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
.+..+++++|+|||+|+.. ++.++.+++++|++.+++++||+ |+ ++... +|. .+.
T Consensus 70 ~l~~~~~~~d~vi~~a~~~------------~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~---~~~-----~~~- 124 (308)
T 1qyc_A 70 SLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEVGTVKRFFP-SE---FGNDV---DNV-----HAV- 124 (308)
T ss_dssp HHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT---TSC-----CCC-
T ss_pred HHHHHHcCCCEEEECCcch------------hhhhHHHHHHHHHhcCCCceEee-cc---cccCc---ccc-----ccC-
Confidence 8888889999999999863 26788999999998633999984 43 33211 110 000
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
.+ . ... | .+|..+|...+..+++++++||+.+++.....+....
T Consensus 125 ------------~p---~--~~~------y-----~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-------- 168 (308)
T 1qyc_A 125 ------------EP---A--KSV------F-----EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAG-------- 168 (308)
T ss_dssp ------------TT---H--HHH------H-----HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTT--------
T ss_pred ------------Cc---c--hhH------H-----HHHHHHHHHHHhcCCCeEEEEeceecccccccccccc--------
Confidence 00 0 011 1 2233344444445899999999999885432111110
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
......+.. .++++++...++++++|++++++.++..+.. .+++|+++++. +++|+.|+++.+.+..|+.
T Consensus 169 -~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 169 -LTAPPRDKV-VILGDGNARVVFVKEEDIGTFTIKAVDDPRT----LNKTLYLRLPA-NTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp -CSSCCSSEE-EEETTSCCEEEEECHHHHHHHHHTTSSCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHTTSC
T ss_pred -ccCCCCCce-EEecCCCceEEEecHHHHHHHHHHHHhCccc----cCeEEEEeCCC-CccCHHHHHHHHHHHhCCC
Confidence 000011222 2346677889999999999999887754322 24788876532 5899999999999999965
No 84
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.80 E-value=4.2e-19 Score=167.06 Aligned_cols=201 Identities=11% Similarity=0.058 Sum_probs=137.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|+|||||||+|++++++|++.+. +|+++.+... .... ....++.++.+|++++ +.+..+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~-----~~~~----~~~~~~~~~~~D~~~~------~~~~~~~ 65 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSS-----RLPS----EGPRPAHVVVGDVLQA------ADVDKTV 65 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGG-----GSCS----SSCCCSEEEESCTTSH------HHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChh-----hccc----ccCCceEEEEecCCCH------HHHHHHH
Confidence 7899999999999999999999875 5565543210 0110 1135788999999987 8888889
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
+++|+|||+|+....... .++|+.++.+++++|++. ++++|||+||.++++...+ .
T Consensus 66 ~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~----~--------------- 121 (206)
T 1hdo_A 66 AGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK----V--------------- 121 (206)
T ss_dssp TTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC----S---------------
T ss_pred cCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCccc----c---------------
Confidence 999999999997654221 358999999999999984 7899999999988765321 0
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
+. .... |..+|..+|...+..+++++++||+.++. .. ..+.. ....
T Consensus 122 ------~~-----~~~~----------y~~~K~~~e~~~~~~~i~~~~lrp~~~~~-~~--~~~~~---------~~~~- 167 (206)
T 1hdo_A 122 ------PP-----RLQA----------VTDDHIRMHKVLRESGLKYVAVMPPHIGD-QP--LTGAY---------TVTL- 167 (206)
T ss_dssp ------CG-----GGHH----------HHHHHHHHHHHHHHTCSEEEEECCSEEEC-CC--CCSCC---------EEES-
T ss_pred ------cc-----cchh----------HHHHHHHHHHHHHhCCCCEEEEeCCcccC-CC--CCcce---------Eecc-
Confidence 00 0011 22334444444445689999999999842 21 11110 0000
Q ss_pred cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 351 KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 351 ~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+ ..+. .++++++|+|++++.++..+. ..+++||++++
T Consensus 168 -~------~~~~--~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~g 204 (206)
T 1hdo_A 168 -D------GRGP--SRVISKHDLGHFMLRCLTTDE----YDGHSTYPSHQ 204 (206)
T ss_dssp -S------SCSS--CSEEEHHHHHHHHHHTTSCST----TTTCEEEEECC
T ss_pred -c------CCCC--CCccCHHHHHHHHHHHhcCcc----ccccceeeecc
Confidence 0 1111 489999999999998876532 23589999886
No 85
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.80 E-value=3.5e-19 Score=172.38 Aligned_cols=210 Identities=18% Similarity=0.137 Sum_probs=141.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|+|||||||||++++++|++.+.. .+|+++++..- ... .....++.++.+|++++ ++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~-----~~~----~~~~~~~~~~~~D~~d~------~~~~ 79 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKL-----TFD----EEAYKNVNQEVVDFEKL------DDYA 79 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCC-----CCC----SGGGGGCEEEECCGGGG------GGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCC-----Ccc----ccccCCceEEecCcCCH------HHHH
Confidence 46789999999999999999999998861 14555543210 000 00123678899999987 7788
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
.+++++|+|||+|+........+..+++|+.|+.+++++|++ .+.++||++||.++++...
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~iv~~SS~~~~~~~~------------------ 140 (242)
T 2bka_A 80 SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKGADKSSN------------------ 140 (242)
T ss_dssp GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTTCS------------------
T ss_pred HHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHH-CCCCEEEEEccCcCCCCCc------------------
Confidence 888899999999998766666788999999999999999988 4788999999987765210
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCC-cEEEEccceeeecccCCcc-ccccCCCCccce
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDI-PVVIIRPSVIESTCKEPFS-GWMEGNRMMDPI 345 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~gl-p~~I~Rp~~V~g~~~~p~~-g~~~~~~~~~~i 345 (554)
..|..+|..+|...+..++ +++++||+.|+|+...+.. .+.. ...
T Consensus 141 ----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~-----~~~ 187 (242)
T 2bka_A 141 ----------------------------FLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLV-----RKF 187 (242)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHH-----HHH
T ss_pred ----------------------------chHHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHH-----HHh
Confidence 0122334444444444578 5999999999997543210 0100 000
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIAS 399 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~ 399 (554)
.+..+ . ......+++++|+|++++.++..... ..+|++.+
T Consensus 188 -----~~~~~---~-~~~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~ 227 (242)
T 2bka_A 188 -----FGSLP---D-SWASGHSVPVVTVVRAMLNNVVRPRD-----KQMELLEN 227 (242)
T ss_dssp -----HCSCC---T-TGGGGTEEEHHHHHHHHHHHHTSCCC-----SSEEEEEH
T ss_pred -----hcccC---c-cccCCcccCHHHHHHHHHHHHhCccc-----cCeeEeeH
Confidence 00111 0 11123589999999999998865322 34666644
No 86
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.80 E-value=7.2e-19 Score=177.66 Aligned_cols=231 Identities=12% Similarity=0.129 Sum_probs=149.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.+++|+|||||||+|+++++.|++.+++| +++.+.. .++..... .....++.++.+|+.++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V---~~~~R~~~~~~~~~~~~~l~-----~~~~~~v~~v~~D~~d~------ 68 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPT---FIYARPLTPDSTPSSVQLRE-----EFRSMGVTIIEGEMEEH------ 68 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCE---EEEECCCCTTCCHHHHHHHH-----HHHHTTCEEEECCTTCH------
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcE---EEEECCcccccChHHHHHHH-----HhhcCCcEEEEecCCCH------
Confidence 46789999999999999999999988654 4443221 11111100 01124688999999987
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+.+..+++++|+|||+|+... +.++++++++|++.+++++||+ | +++... +|. .
T Consensus 69 ~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~---~~~-----~-- 122 (321)
T 3c1o_A 69 EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE---DRI-----K-- 122 (321)
T ss_dssp HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG---GGC-----C--
T ss_pred HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc---ccc-----c--
Confidence 889999999999999998632 7889999999998533899983 3 233211 110 0
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
+. ...... | .+|. .+|.+.+..+++++++||+.+++... +.+....
T Consensus 123 -------------~~---~p~~~~------y-~sK~----~~e~~~~~~~~~~~~lrp~~~~~~~~---~~~~~~~---- 168 (321)
T 3c1o_A 123 -------------PL---PPFESV------L-EKKR----IIRRAIEAAALPYTYVSANCFGAYFV---NYLLHPS---- 168 (321)
T ss_dssp -------------CC---HHHHHH------H-HHHH----HHHHHHHHHTCCBEEEECCEEHHHHH---HHHHCCC----
T ss_pred -------------cC---CCcchH------H-HHHH----HHHHHHHHcCCCeEEEEeceeccccc---ccccccc----
Confidence 00 000011 2 2233 33444434589999999999987432 1111100
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
......+.+ ..+++++...++++++|++++++.++..+.. .+++|+++++. +++|+.|+++.+.+.+|+.
T Consensus 169 --~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~g~~-~~~t~~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 169 --PHPNRNDDI-VIYGTGETKFVLNYEEDIAKYTIKVACDPRC----CNRIVIYRPPK-NIISQNELISLWEAKSGLS 238 (321)
T ss_dssp --SSCCTTSCE-EEETTSCCEEEEECHHHHHHHHHHHHHCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHHTSC
T ss_pred --ccccccCce-EEecCCCcceeEeeHHHHHHHHHHHHhCccc----cCeEEEEeCCC-CcccHHHHHHHHHHHcCCc
Confidence 000112222 2345677789999999999999998875432 24778886531 5899999999999999975
No 87
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.78 E-value=1.3e-18 Score=175.45 Aligned_cols=223 Identities=14% Similarity=0.143 Sum_probs=147.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|+|||||||+|+++++.|++.+.+| +++.+. ....+.+. ...+++++.+|+.++ +.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V---~~l~R~~~~~~~~~~~l--------~~~~v~~v~~Dl~d~------~~l~ 74 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPT---YVFTRPNSSKTTLLDEF--------QSLGAIIVKGELDEH------EKLV 74 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCE---EEEECTTCSCHHHHHHH--------HHTTCEEEECCTTCH------HHHH
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcE---EEEECCCCchhhHHHHh--------hcCCCEEEEecCCCH------HHHH
Confidence 589999999999999999999988654 444321 11112111 124678899999987 8899
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
.+++++|+|||+|+.. ++.++++++++|++.+++++||+ |+ ++... +| ..+
T Consensus 75 ~a~~~~d~vi~~a~~~------------~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~---~~-----~~~----- 125 (318)
T 2r6j_A 75 ELMKKVDVVISALAFP------------QILDQFKILEAIKVAGNIKRFLP-SD---FGVEE---DR-----INA----- 125 (318)
T ss_dssp HHHTTCSEEEECCCGG------------GSTTHHHHHHHHHHHCCCCEEEC-SC---CSSCT---TT-----CCC-----
T ss_pred HHHcCCCEEEECCchh------------hhHHHHHHHHHHHhcCCCCEEEe-ec---cccCc---cc-----ccC-----
Confidence 9999999999999863 26789999999998533899985 43 33211 11 000
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
. ...... | .+|..+|...+..+++++++||+.+++... +.+....
T Consensus 126 -----------~--~p~~~~------y-----~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~---~~~~~~~-------- 170 (318)
T 2r6j_A 126 -----------L--PPFEAL------I-----ERKRMIRRAIEEANIPYTYVSANCFASYFI---NYLLRPY-------- 170 (318)
T ss_dssp -----------C--HHHHHH------H-----HHHHHHHHHHHHTTCCBEEEECCEEHHHHH---HHHHCTT--------
T ss_pred -----------C--CCcchh------H-----HHHHHHHHHHHhcCCCeEEEEcceehhhhh---hhhcccc--------
Confidence 0 000011 1 223344444445689999999999876321 1111110
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
...+.. .++++++...++++++|++++++.++..+.. .+++|+++++. +.+|+.|+++.+.+..|++
T Consensus 171 -~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 171 -DPKDEI-TVYGTGEAKFAMNYEQDIGLYTIKVATDPRA----LNRVVIYRPST-NIITQLELISRWEKKIGKK 237 (318)
T ss_dssp -CCCSEE-EEETTSCCEEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHHTCC
T ss_pred -CCCCce-EEecCCCceeeEeeHHHHHHHHHHHhcCccc----cCeEEEecCCC-CccCHHHHHHHHHHHhCCC
Confidence 011222 2345677789999999999999988765332 24677776431 5899999999999999975
No 88
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.77 E-value=6.1e-18 Score=167.20 Aligned_cols=239 Identities=13% Similarity=0.094 Sum_probs=156.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ..++.++.+|++++ ++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~------~~ 78 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADDHGQKVCNNIGS------PDVISFVHCDVTKD------ED 78 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHCC------TTTEEEEECCTTCH------HH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCChhHHHHHHHHhCC------CCceEEEECCCCCH------HH
Confidence 5689999999999999999999999876 45555432 12222222211 13789999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||..++.
T Consensus 79 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 158 (278)
T 2bgk_A 79 VRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT 158 (278)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC
Confidence 776665 79999999997532 2567889999999999999998753 2467999999987755
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccce
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSV 323 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~ 323 (554)
...+ .. .. |..+|...+.+.+... ...|++++++|||.
T Consensus 159 ~~~~---------------------------~~------~~------Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 199 (278)
T 2bgk_A 159 AGEG---------------------------VS------HV------YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYI 199 (278)
T ss_dssp CCTT---------------------------SC------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred CCCC---------------------------CC------cc------hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEece
Confidence 3210 00 11 2222333333333222 13589999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN 403 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~ 403 (554)
|+++........ .......+.. ..+.....+++++|+|++++.++..... ...+++|++.++ .
T Consensus 200 v~t~~~~~~~~~------~~~~~~~~~~-------~~~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg--~ 262 (278)
T 2bgk_A 200 VASPLLTDVFGV------DSSRVEELAH-------QAANLKGTLLRAEDVADAVAYLAGDESK--YVSGLNLVIDGG--Y 262 (278)
T ss_dssp CSCCCCTTSSSC------CHHHHHHHHH-------HTCSSCSCCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--G
T ss_pred ecchhhhhhccc------chhHHHHhhh-------cccccccccCCHHHHHHHHHHHcCcccc--cCCCCEEEECCc--c
Confidence 988653221110 0000000000 0011124578999999999988754321 224689999988 7
Q ss_pred cccHHHHHHHHHhH
Q 042694 404 PLVFQDLARLLHEH 417 (554)
Q Consensus 404 ~it~~e~~~~~~~~ 417 (554)
.+++.|+++.+.+.
T Consensus 263 ~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 263 TRTNPAFPTALKHG 276 (278)
T ss_dssp GGCCTHHHHHSCSC
T ss_pred cccCCccchhhhhh
Confidence 88999999887653
No 89
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.75 E-value=2.7e-17 Score=158.60 Aligned_cols=203 Identities=14% Similarity=0.100 Sum_probs=129.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+|+||||||||+||++++++|++.+. . +|+++.+.. +... .....++.++.+|++++ ++++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~-~-~V~~~~R~~-----~~~~----~~~~~~~~~~~~Dl~d~------~~~~~ 84 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQT-I-KQTLFARQP-----AKIH----KPYPTNSQIIMGDVLNH------AALKQ 84 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT-E-EEEEEESSG-----GGSC----SSCCTTEEEEECCTTCH------HHHHH
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCC-c-eEEEEEcCh-----hhhc----ccccCCcEEEEecCCCH------HHHHH
Confidence 468999999999999999999999772 1 455554321 0111 11235789999999987 89999
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENF 268 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~ 268 (554)
+++++|+|||+|+...+. ..++++++++++ .+.++||++||..+++...+...+ +.+..
T Consensus 85 ~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~-~~~~~iV~iSS~~~~~~~~~~~~~--~~~~~------- 143 (236)
T 3qvo_A 85 AMQGQDIVYANLTGEDLD-----------IQANSVIAAMKA-CDVKRLIFVLSLGIYDEVPGKFVE--WNNAV------- 143 (236)
T ss_dssp HHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHH-TTCCEEEEECCCCC------------------------
T ss_pred HhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHH-cCCCEEEEEecceecCCCCccccc--chhhc-------
Confidence 999999999999874332 347789999998 478999999999988754210000 00000
Q ss_pred cccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeee
Q 042694 269 VSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILY 348 (554)
Q Consensus 269 ~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~ 348 (554)
.. .+...|..+| ......|++++++|||.+++..... + ..
T Consensus 144 --------~~--------------~~~~~~~~~~----~~l~~~gi~~~~vrPg~i~~~~~~~---~-----------~~ 183 (236)
T 3qvo_A 144 --------IG--------------EPLKPFRRAA----DAIEASGLEYTILRPAWLTDEDIID---Y-----------EL 183 (236)
T ss_dssp ---------C--------------GGGHHHHHHH----HHHHTSCSEEEEEEECEEECCSCCC---C-----------EE
T ss_pred --------cc--------------chHHHHHHHH----HHHHHCCCCEEEEeCCcccCCCCcc---e-----------EE
Confidence 00 0111122333 3334569999999999998753211 0 00
Q ss_pred eccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 349 YGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 349 ~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+ ......+++++|||++++.++..+.. ..+++|+++++
T Consensus 184 ~~~~--------~~~~~~~i~~~DvA~~i~~ll~~~~~---~~g~~~~i~~~ 224 (236)
T 3qvo_A 184 TSRN--------EPFKGTIVSRKSVAALITDIIDKPEK---HIGENIGINQP 224 (236)
T ss_dssp ECTT--------SCCSCSEEEHHHHHHHHHHHHHSTTT---TTTEEEEEECS
T ss_pred eccC--------CCCCCcEECHHHHHHHHHHHHcCccc---ccCeeEEecCC
Confidence 0011 11113578999999999998876441 23689999987
No 90
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.74 E-value=3.1e-17 Score=162.52 Aligned_cols=241 Identities=14% Similarity=0.106 Sum_probs=146.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++|+|+||||+|+||++++++|++.|. +|+++++ ...+.+.+. ...++.++.+|++++ +..
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~------~~~ 66 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD---TVIGTARRTEALDDLVAA--------YPDRAEAISLDVTDG------ERI 66 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGGHHHHHH--------CTTTEEEEECCTTCH------HHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHh--------ccCCceEEEeeCCCH------HHH
Confidence 578999999999999999999999886 4555443 223333332 234788999999988 777
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchH----HHHHHHHHHHcCCCceEEEEeeceecccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRG----PCRLMEFAKQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k~~v~vST~~v~~~~ 248 (554)
+.+.+ ++|+|||+||.... .+.++..+++|+.| ++.++..+++ .+..++|++||.......
T Consensus 67 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~~~iv~~sS~~~~~~~ 145 (281)
T 3m1a_A 67 DVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE-RGSGSVVNISSFGGQLSF 145 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEcCccccCCC
Confidence 66665 78999999997432 35678899999999 5555555555 367899999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
+... .|..+|...+.+++.+. ...|+++.++|||.|.
T Consensus 146 ----------------------------~~~~------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (281)
T 3m1a_A 146 ----------------------------AGFS------------AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFR 185 (281)
T ss_dssp ----------------------------TTCH------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred ----------------------------CCch------------HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence 1111 12223333333333322 1258999999999997
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
++...+....... ...........+. + . ........+++++|+|++++.++.... .+..|+++++ ...
T Consensus 186 t~~~~~~~~~~~~--~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~~dva~a~~~~~~~~~-----~~~~~~l~s~--~~~ 253 (281)
T 3m1a_A 186 TNLFGKGAAYFSE--ENPAYAEKVGPTR-Q-L-VQGSDGSQPGDPAKAAAAIRLALDTEK-----TPLRLALGGD--AVD 253 (281)
T ss_dssp CTTTCCCCEEECC--BCTTTHHHHHHHH-H-H-HHC-----CBCHHHHHHHHHHHHHSSS-----CCSEEEESHH--HHH
T ss_pred cccccccccccCC--cchhhHHHhHHHH-H-H-HhhccCCCCCCHHHHHHHHHHHHhCCC-----CCeEEecCch--HHH
Confidence 7543321111000 0000000000000 0 0 011122457789999999999886533 2468999887 444
Q ss_pred cHHHHHHHHHhHhc
Q 042694 406 VFQDLARLLHEHYS 419 (554)
Q Consensus 406 t~~e~~~~~~~~~~ 419 (554)
...+....+.+.++
T Consensus 254 ~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 254 FLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55666655555443
No 91
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.73 E-value=2.5e-18 Score=167.47 Aligned_cols=235 Identities=9% Similarity=0.057 Sum_probs=143.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|||||||||||++++++|++.+. +|+++++.. .. ... .+.+|++++ +.++.+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~---~V~~~~r~~--------~~-----~~~---~~~~D~~~~------~~~~~~ 55 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGH---TVIGIDRGQ--------AD-----IEA---DLSTPGGRE------TAVAAV 55 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSS--------SS-----EEC---CTTSHHHHH------HHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCh--------hH-----ccc---cccCCcccH------HHHHHH
Confidence 36899999999999999999999875 456554321 00 000 156788776 667666
Q ss_pred hc----CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc--eeeccccCCC
Q 042694 190 AK----EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG--KVMEKPFCMG 260 (554)
Q Consensus 190 ~~----~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~--~i~E~~~~~~ 260 (554)
.+ ++|+|||+||......+++..+++|+.|+.++++++... .+.+++|++||..+++.... ...|....
T Consensus 56 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~-- 133 (255)
T 2dkn_A 56 LDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA-- 133 (255)
T ss_dssp HHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH--
T ss_pred HHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc--
Confidence 65 899999999987645678899999999999999988753 24579999999988765311 00000000
Q ss_pred CCcccccccccccCCCCCCChHHH--H-HHh-hhccCCCCchHHHHHHHhhhhh---cCCCcEEEEccceeeecccCCcc
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENE--M-KLA-LESKEFSTDGEVAQKMKGLGLE---RGDIPVVIIRPSVIESTCKEPFS 333 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~-~~~k~~~~~k~~ae~l~e~~~~---~~glp~~I~Rp~~V~g~~~~p~~ 333 (554)
.+.... . ... .....|..+|...+.+++.... ..|++++++||+.|+++....
T Consensus 134 ------------------~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~-- 193 (255)
T 2dkn_A 134 ------------------GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA-- 193 (255)
T ss_dssp ------------------TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH--
T ss_pred ------------------cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh--
Confidence 000000 0 000 0000233445555555544332 258999999999998864311
Q ss_pred ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHH
Q 042694 334 GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQ 408 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~ 408 (554)
+.... .... ....+. + ...++++++|+|++++.++..... ...+++|+++++ .+++++
T Consensus 194 -~~~~~-~~~~--------~~~~~~--~-~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg--~~~~~~ 251 (255)
T 2dkn_A 194 -SKADP-RYGE--------STRRFV--A-PLGRGSEPREVAEAIAFLLGPQAS--FIHGSVLFVDGG--MDALMR 251 (255)
T ss_dssp -HHHCT-TTHH--------HHHSCC--C-TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--HHHHHC
T ss_pred -cccch-hhHH--------HHHHHH--H-HhcCCCCHHHHHHHHHHHhCCCcc--cceeeEEEecCC--eEeeee
Confidence 10100 0000 000000 1 224789999999999998865421 123689999987 555543
No 92
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.73 E-value=1.4e-16 Score=151.86 Aligned_cols=203 Identities=13% Similarity=0.093 Sum_probs=132.3
Q ss_pred CcEEEEecccccccHHHHHHHH-hhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKIL-RTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL-~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+|+|+||||||++|++++++|+ +.+. +|+++.+..-.++.+.. ....++.++.+|++++ +++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~------~~~~~ 69 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQLKTRIPPEI------IDHERVTVIEGSFQNP------GXLEQ 69 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSHHHHSCHHH------HTSTTEEEEECCTTCH------HHHHH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCccccchhhc------cCCCceEEEECCCCCH------HHHHH
Confidence 3569999999999999999999 7675 45555433110111110 0235789999999987 88899
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENF 268 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~ 268 (554)
+++++|+|||+|+.. |+. ++++++.+++ .+.++||++||..++....+...+
T Consensus 70 ~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~~~~~~~~~~~~-------------- 121 (221)
T 3r6d_A 70 AVTNAEVVFVGAMES------------GSD-MASIVKALSR-XNIRRVIGVSMAGLSGEFPVALEK-------------- 121 (221)
T ss_dssp HHTTCSEEEESCCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETTTTSCSCHHHHH--------------
T ss_pred HHcCCCEEEEcCCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeeceecCCCCccccc--------------
Confidence 999999999999864 344 8999999998 478999999999887643210000
Q ss_pred cccccCCCCCCChHHHHHHhhhccCCCC-chHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 269 VSNSRRLIPTLDVENEMKLALESKEFST-DGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 269 ~~~~~~~~~~~d~~~~~~~~~~~k~~~~-~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
... .... .|..+|..+|...+..+++++++|||.|+++.. .+.. ..
T Consensus 122 ---------------~~~------~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~---~~~~---------~~ 168 (221)
T 3r6d_A 122 ---------------WTF------DNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPE---XTDY---------EL 168 (221)
T ss_dssp ---------------HHH------HTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTT---CCCC---------EE
T ss_pred ---------------ccc------cccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCC---Ccce---------ee
Confidence 000 0011 244455555555556799999999999987521 1100 00
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHH--HHhcccCCCCCeEEEeeCC
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAI--AQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~--~~~~~~~~~~~~vyn~~~~ 400 (554)
...+ ......+++.+|+|++++.++ ..+.. ...+.+.++++
T Consensus 169 -~~~~--------~~~~~~~~~~~dvA~~~~~l~~~~~~~~---~~~~~~~i~~~ 211 (221)
T 3r6d_A 169 -IPEG--------AQFNDAQVSREAVVKAIFDILHAADETP---FHRTSIGVGEP 211 (221)
T ss_dssp -ECTT--------SCCCCCEEEHHHHHHHHHHHHTCSCCGG---GTTEEEEEECT
T ss_pred -ccCC--------ccCCCceeeHHHHHHHHHHHHHhcChhh---hhcceeeecCC
Confidence 0000 011123788899999999988 55332 12467777765
No 93
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.73 E-value=4e-17 Score=159.06 Aligned_cols=224 Identities=12% Similarity=0.100 Sum_probs=142.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+... ....++..+.+|++++ ++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~ 74 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADAANHVVDEIQ-----QLGGQAFACRCDITSE------QE 74 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHHHHHHHHHHHH-----HTTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHH-----HhCCceEEEEcCCCCH------HH
Confidence 4678999999999999999999999875 45655432 1222222211 0234788899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+....
T Consensus 75 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 154 (255)
T 1fmc_A 75 LSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI 154 (255)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC
Confidence 776665 89999999997543 3567889999999999999988521 2568999999987654311
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIES 326 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g 326 (554)
.. .. |..+|...+.+.+... ...|+++.++|||.|++
T Consensus 155 ----------------------------~~------~~------Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t 194 (255)
T 1fmc_A 155 ----------------------------NM------TS------YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT 194 (255)
T ss_dssp ----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred ----------------------------CC------cc------cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcc
Confidence 11 11 2222333333333222 23589999999999987
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCccc
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLV 406 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it 406 (554)
+..... .. .........+ .-...+++++|+|++++.++..... ...+++|++.++ ..+|
T Consensus 195 ~~~~~~---~~-----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg--~~~s 253 (255)
T 1fmc_A 195 DALKSV---IT-----PEIEQKMLQH---------TPIRRLGQPQDIANAALFLCSPAAS--WVSGQILTVSGG--GVQE 253 (255)
T ss_dssp HHHHTT---CC-----HHHHHHHHHT---------CSSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--SCCC
T ss_pred hhhhhc---cC-----hHHHHHHHhc---------CCcccCCCHHHHHHHHHHHhCCccc--cCCCcEEEECCc--eecc
Confidence 543210 00 0000000000 0113477899999999888754321 123579999988 4444
No 94
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.71 E-value=2.4e-16 Score=155.89 Aligned_cols=249 Identities=14% Similarity=0.097 Sum_probs=139.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ......++.++.+|++++ ++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~------~~ 72 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAERLEETRQQILA--AGVSEQNVNSVVADVTTD------AG 72 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH--TTCCGGGEEEEECCTTSH------HH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh--cccCCCceeEEecccCCH------HH
Confidence 4678999999999999999999999886 45555432 12222222100 000124688999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCC-----------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTT-----------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+.+ ++|++||+||... ..+.++..+++|+.|+.++++.+... .+ .++|++||...
T Consensus 73 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~ 151 (278)
T 1spx_A 73 QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS 151 (278)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccc
Confidence 777665 8999999999753 23457788999999999999988653 13 79999999765
Q ss_pred -cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 245 -NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 245 -~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
+... +....|...+... ..+++.++.+.. ..|+++.++|||.
T Consensus 152 ~~~~~----------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~ 194 (278)
T 1spx_A 152 GLHAT----------------------------PDFPYYSIAKAAI--------DQYTRNTAIDLI-QHGIRVNSISPGL 194 (278)
T ss_dssp SSSCC----------------------------TTSHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECC
T ss_pred cccCC----------------------------CCccHHHHHHHHH--------HHHHHHHHHHHH-hcCcEEEEEecCc
Confidence 3321 1111111111111 112333333322 3489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN 403 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~ 403 (554)
|.++...... .... ......... ....... + ...+++++|+|++++.++...... -..++++++.++ .
T Consensus 195 v~t~~~~~~~--~~~~-~~~~~~~~~-~~~~~~~---p--~~~~~~~~dvA~~v~~l~s~~~~~-~~tG~~~~vdgG--~ 262 (278)
T 1spx_A 195 VATGFGSAMG--MPEE-TSKKFYSTM-ATMKECV---P--AGVMGQPQDIAEVIAFLADRKTSS-YIIGHQLVVDGG--S 262 (278)
T ss_dssp BCCCC-----------------HHHH-HHHHHHC---T--TSSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTT--G
T ss_pred ccCccccccc--cCch-hhhhhhHHH-HHHHhcC---C--CcCCCCHHHHHHHHHHHcCccccC-cccCcEEEECCC--c
Confidence 9765321100 0000 000000000 0000000 1 124788999999998887643310 023589999988 6
Q ss_pred cccHHHHHHHHHhH
Q 042694 404 PLVFQDLARLLHEH 417 (554)
Q Consensus 404 ~it~~e~~~~~~~~ 417 (554)
.+++.++.+.+.+.
T Consensus 263 ~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 263 SLIMGLHCQDFAKL 276 (278)
T ss_dssp GGC-----------
T ss_pred ccccCcccccHHHH
Confidence 88999999888764
No 95
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.70 E-value=3.6e-16 Score=153.14 Aligned_cols=231 Identities=12% Similarity=0.084 Sum_probs=137.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCch--hhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSY--QAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~--~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+...... ......++.++.+|++++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------ 75 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA---TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA------ 75 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH------
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH------
Confidence 4678999999999999999999999875 45655432 2222222221100 000014688999999987
Q ss_pred HHHHHHhcC-------c-cEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeecee
Q 042694 184 DLADVIAKE-------V-DVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~~-------v-diViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v 244 (554)
+.++.+.++ + |+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++|++||.+.
T Consensus 76 ~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 155 (264)
T 2pd6_A 76 RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVG 155 (264)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhh
Confidence 666666553 4 999999997643 3567889999999999999998753 12 468999999755
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcc
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRP 321 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp 321 (554)
..... .. . .|..+|...+.+.+... ...|+++.++||
T Consensus 156 ~~~~~----------------------------~~------~------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P 195 (264)
T 2pd6_A 156 KVGNV----------------------------GQ------T------NYAASKAGVIGLTQTAARELGRHGIRCNSVLP 195 (264)
T ss_dssp HHCCT----------------------------TB------H------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred ccCCC----------------------------CC------h------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee
Confidence 32210 01 1 12223333333333222 125899999999
Q ss_pred ceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCC
Q 042694 322 SVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSV 401 (554)
Q Consensus 322 ~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~ 401 (554)
|.|+++.....+.. ....+..+ . + ...+++++|+|++++.++..... ...+.++++.++
T Consensus 196 g~v~t~~~~~~~~~---------~~~~~~~~-~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg- 254 (264)
T 2pd6_A 196 GFIATPMTQKVPQK---------VVDKITEM-I------P--MGHLGDPEDVADVVAFLASEDSG--YITGTSVEVTGG- 254 (264)
T ss_dssp CSBCSCC-------------------CTGGG-C------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT-
T ss_pred ecccccchhhcCHH---------HHHHHHHh-C------C--CCCCCCHHHHHHHHHHHcCCccc--CCCCCEEEECCC-
Confidence 99988644221110 00000000 0 1 12467899999999888754321 234689999887
Q ss_pred CCcccHHH
Q 042694 402 VNPLVFQD 409 (554)
Q Consensus 402 ~~~it~~e 409 (554)
..+++..
T Consensus 255 -~~~~~~~ 261 (264)
T 2pd6_A 255 -LFMAENL 261 (264)
T ss_dssp -C------
T ss_pred -ceecccc
Confidence 4455443
No 96
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.70 E-value=1e-16 Score=156.72 Aligned_cols=223 Identities=14% Similarity=0.125 Sum_probs=140.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.+. +|+++++. ..+.+.+... ....++.++.+|++++ ++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~D~~~~------~~ 76 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA---RVIIADLDEAMATKAVEDLR-----MEGHDVSSVVMDVTNT------ES 76 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH-----HTTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH-----hcCCceEEEEecCCCH------HH
Confidence 4688999999999999999999999875 56655432 1222222111 0134788999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|+|||+||... + .+.++..+++|+.|+.++++.+... .+..++|++||.+....
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 156 (260)
T 3awd_A 77 VQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV 156 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc
Confidence 666654 7999999999654 1 2456788999999999999988642 25679999999865432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
..+ .+.. .|..+|...+.+.+.+. ...|+++.++|||.|
T Consensus 157 ~~~--------------------------~~~~------------~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v 198 (260)
T 3awd_A 157 NRP--------------------------QQQA------------AYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYI 198 (260)
T ss_dssp CSS--------------------------SCCH------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CCC--------------------------CCcc------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeee
Confidence 110 0001 12222333333333322 125899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+++...+ .+.. ......+..+ . + ...+++++|+|++++.++..... ...+.+|++.++
T Consensus 199 ~t~~~~~--~~~~-----~~~~~~~~~~-~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg 256 (260)
T 3awd_A 199 ETTLTRF--GMEK-----PELYDAWIAG-T------P--MGRVGQPDEVASVVQFLASDAAS--LMTGAIVNVDAG 256 (260)
T ss_dssp CCTTTHH--HHTC-----HHHHHHHHHT-C------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccchhhc--ccCC-----hHHHHHHHhc-C------C--cCCCCCHHHHHHHHHHHhCchhc--cCCCcEEEECCc
Confidence 8854320 0000 0000000000 0 1 13478899999999888754321 224679999886
No 97
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.69 E-value=8.2e-17 Score=161.13 Aligned_cols=239 Identities=12% Similarity=0.073 Sum_probs=149.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|++++ ++
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~------~~ 90 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMDVLKATAEQIS----SQTGNKVHAIQCDVRDP------DM 90 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHSSCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH----HhcCCceEEEEeCCCCH------HH
Confidence 5789999999999999999999999876 45655432 1222222110 00135789999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.+.+..
T Consensus 91 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~ 170 (302)
T 1w6u_A 91 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG 170 (302)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence 666654 56999999996432 3467889999999999998888542 24579999999866432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
.. .. .. |..+|...+.+++... ...|+++.++|||.|
T Consensus 171 ~~----------------------------~~------~~------Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v 210 (302)
T 1w6u_A 171 SG----------------------------FV------VP------SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI 210 (302)
T ss_dssp CT----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CC----------------------------Cc------ch------hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccC
Confidence 11 11 11 1222333333333222 125899999999999
Q ss_pred eecc-cCCc-cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCC
Q 042694 325 ESTC-KEPF-SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVV 402 (554)
Q Consensus 325 ~g~~-~~p~-~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~ 402 (554)
.++. .... +... . ......+ . + ...+++++|+|++++.++..... ...+++|++.++
T Consensus 211 ~t~~~~~~~~~~~~-------~-~~~~~~~-~------p--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg-- 269 (302)
T 1w6u_A 211 KTKGAFSRLDPTGT-------F-EKEMIGR-I------P--CGRLGTVEELANLAAFLCSDYAS--WINGAVIKFDGG-- 269 (302)
T ss_dssp CC------CCTTSH-------H-HHHHHTT-C------T--TSSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT--
T ss_pred CCcchhhhcccchh-------h-HHHHHhc-C------C--cCCCCCHHHHHHHHHHHcCCccc--ccCCCEEEECCC--
Confidence 7742 1110 1000 0 0000000 0 1 12477899999999887754321 123689999988
Q ss_pred CcccHHHHHHHHHhHhcc
Q 042694 403 NPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 403 ~~it~~e~~~~~~~~~~~ 420 (554)
..+++.++++.+.+..++
T Consensus 270 ~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 270 EEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHHHSTTGGGGGCCHH
T ss_pred eeeccCCccccchhhccc
Confidence 677877777766665543
No 98
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.69 E-value=3.7e-16 Score=151.23 Aligned_cols=217 Identities=14% Similarity=0.153 Sum_probs=140.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|+++++.. .+.+.+. ..++.++.+|++++ +.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~------~~ 66 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTNSDLVSLAKE---------CPGIEPVCVDLGDW------DA 66 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH---------STTCEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHh---------ccCCCcEEecCCCH------HH
Confidence 4678999999999999999999999876 456654321 2222221 12456779999987 77
Q ss_pred HHHHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceecccccce
Q 042694 186 ADVIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 186 ~~~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~~~~~ 251 (554)
.+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+ ..++|++||..++....
T Consensus 67 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-- 144 (244)
T 1cyd_A 67 TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-- 144 (244)
T ss_dssp HHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--
T ss_pred HHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC--
Confidence 777775 58999999997542 3467889999999999999988653 13 57999999987654321
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecc
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~ 328 (554)
.. .. |..+|...+.+++.+. ...++++.++||+.|+++.
T Consensus 145 --------------------------~~------~~------Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 145 --------------------------NL------IT------YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp --------------------------TB------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred --------------------------Cc------ch------hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 00 11 2223333344433322 1248999999999998754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... +.. ......+..+ ....++++++|+|++++.++..... ...++++++.++
T Consensus 187 ~~~~--~~~-----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 240 (244)
T 1cyd_A 187 GKKV--SAD-----PEFARKLKER---------HPLRKFAEVEDVVNSILFLLSDRSA--STSGGGILVDAG 240 (244)
T ss_dssp HHHH--TCC-----HHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSSEEEESTT
T ss_pred cccc--ccC-----HHHHHHHHhc---------CCccCCCCHHHHHHHHHHHhCchhh--cccCCEEEECCC
Confidence 3110 000 0000000011 1125789999999999988765322 223578888766
No 99
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.68 E-value=9.2e-16 Score=150.54 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=127.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ +.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 77 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEYELNECLSKWQK-----KGFQVTGSVCDASLR------PE 77 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeeEEEECCCCCH------HH
Confidence 4678999999999999999999999876 45555432 12222222110 134688999999987 66
Q ss_pred HHHHh--------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIA--------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+. .++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+..
T Consensus 78 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 157 (266)
T 1xq1_A 78 REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS 157 (266)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred HHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC
Confidence 66655 579999999997542 3467888999999999999998421 35689999999866442
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
.. ....| ..+|...+.+.+... ...|+++.++|||.|
T Consensus 158 ~~----------------------------~~~~Y------------~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 197 (266)
T 1xq1_A 158 AS----------------------------VGSIY------------SATKGALNQLARNLACEWASDGIRANAVAPAVI 197 (266)
T ss_dssp -------------------------------CCHH------------HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSC
T ss_pred CC----------------------------CCchH------------HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCC
Confidence 11 11112 222333333332221 124899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+++...... .. ..... ..... + ...+++++|++++++.++..... ...++++++.++
T Consensus 198 ~t~~~~~~~---~~-----~~~~~----~~~~~---~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 254 (266)
T 1xq1_A 198 ATPLAEAVY---DD-----EFKKV----VISRK---P--LGRFGEPEEVSSLVAFLCMPAAS--YITGQTICVDGG 254 (266)
T ss_dssp C------------------------------------------CCGGGGHHHHHHHTSGGGT--TCCSCEEECCCC
T ss_pred ccchhhhhc---CH-----HHHHH----HHhcC---C--CCCCcCHHHHHHHHHHHcCcccc--CccCcEEEEcCC
Confidence 886432210 00 00000 00000 0 12467899999999887754321 223679999887
No 100
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.68 E-value=6.8e-16 Score=150.35 Aligned_cols=217 Identities=14% Similarity=0.110 Sum_probs=122.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+||||||+|+||++++++|++.|. +|+++++ +..+.+.+.... ...++.++.+|++++ ++
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 72 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA---AVVVADINAEAAEAVAKQIVA-----DGGTAISVAVDVSDP------ES 72 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTSH------HH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 5689999999999999999999999886 4555543 222333322211 245788999999998 77
Q ss_pred HHHHhc-------CccEEEEcCCCCC----------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ ++|+|||+||... -.+.++..+++|+.|+..+.+.+... .+..++|++||...+
T Consensus 73 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 152 (253)
T 3qiv_A 73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW 152 (253)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 776665 8999999999732 13567889999999966666655321 246789999998665
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccc
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPS 322 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~ 322 (554)
.... .|..+|...+.+.+... ...|+++.+++||
T Consensus 153 ~~~~-------------------------------------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG 189 (253)
T 3qiv_A 153 LYSN-------------------------------------------YYGLAKVGINGLTQQLSRELGGRNIRINAIAPG 189 (253)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-
T ss_pred CCCc-------------------------------------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEec
Confidence 2210 35555654444444332 2348999999999
Q ss_pred eeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|.++....... ......+..+. ....+..++|++++++.++..... .-.+++|++.++
T Consensus 190 ~v~t~~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~--~~tG~~~~vdgG 248 (253)
T 3qiv_A 190 PIDTEANRTTTP--------KEMVDDIVKGL---------PLSRMGTPDDLVGMCLFLLSDEAS--WITGQIFNVDGG 248 (253)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHSGGGT--TCCSCEEEC---
T ss_pred CCcccchhhcCc--------HHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 998754321100 00000001111 012355689999999888764332 224689999887
No 101
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.68 E-value=5.8e-16 Score=150.13 Aligned_cols=223 Identities=16% Similarity=0.127 Sum_probs=137.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|++++ ++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~------~~ 71 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS---TVIITGTSGERAKAVAEEIA----NKYGVKAHGVEMNLLSE------ES 71 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHH----HHHCCCEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHH----hhcCCceEEEEccCCCH------HH
Confidence 4678999999999999999999999876 45555432 1222222110 00134788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.......
T Consensus 72 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 151 (248)
T 2pnf_A 72 INKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN 151 (248)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC
Confidence 776665 79999999997542 3467789999999997776655321 356899999997543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++++.. ..++++.++|||.|.++.
T Consensus 152 ~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~ 194 (248)
T 2pnf_A 152 V----------------------------GQVNYSTTKAGL--------IGFTKSLAKELA-PRNVLVNAVAPGFIETDM 194 (248)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCGG
T ss_pred C----------------------------CCchHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEEeceecCch
Confidence 1 000111111111 123333433332 248999999999997754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...++. ........ .. + ...+++++|++++++.++..... ...+++|++.++
T Consensus 195 ~~~~~~---------~~~~~~~~-~~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg 246 (248)
T 2pnf_A 195 TAVLSE---------EIKQKYKE-QI------P--LGRFGSPEEVANVVLFLCSELAS--YITGEVIHVNGG 246 (248)
T ss_dssp GGGSCH---------HHHHHHHH-TC------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhccH---------HHHHHHHh-cC------C--CCCccCHHHHHHHHHHHhCchhh--cCCCcEEEeCCC
Confidence 321110 00000000 00 1 13578899999999888764321 223689998875
No 102
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.67 E-value=3.8e-16 Score=151.14 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=137.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEE-Ecc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+|+|+||||||+||++++++|++.|. +|++ .++ ...+.+.+.... ...++.++.+|++++ ++.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~---~v~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~ 66 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSAKAAEEVSKQIEA-----YGGQAITFGGDVSKE------ADV 66 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHH-----HTCEEEEEECCTTSH------HHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHHHHHHHHHHh-----cCCcEEEEeCCCCCH------HHH
Confidence 57899999999999999999999886 4454 332 222222222111 234788999999987 777
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||........
T Consensus 67 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 146 (244)
T 1edo_A 67 EAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI 146 (244)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC
Confidence 76665 79999999997642 2567889999999999999988653 2567999999975532210
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
....|...+... ..+++.++++.. ..|+++.++|||.|.++..
T Consensus 147 ----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~ 189 (244)
T 1edo_A 147 ----------------------------GQANYAAAKAGV--------IGFSKTAAREGA-SRNINVNVVCPGFIASDMT 189 (244)
T ss_dssp ----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHH-TTTEEEEEEEECSBCSHHH
T ss_pred ----------------------------CCccchhhHHHH--------HHHHHHHHHHhh-hcCCEEEEEeeCccccchh
Confidence 001111111111 123344443332 3589999999999977533
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..... ....... ... + ...+++++|+|++++.++..+.. ....+++|++.++
T Consensus 190 ~~~~~---------~~~~~~~-~~~------~--~~~~~~~~dva~~~~~l~~~~~~-~~~~G~~~~v~gG 241 (244)
T 1edo_A 190 AKLGE---------DMEKKIL-GTI------P--LGRTGQPENVAGLVEFLALSPAA-SYITGQAFTIDGG 241 (244)
T ss_dssp HTTCH---------HHHHHHH-TSC------T--TCSCBCHHHHHHHHHHHHHCSGG-GGCCSCEEEESTT
T ss_pred hhcCh---------HHHHHHh-hcC------C--CCCCCCHHHHHHHHHHHhCCCcc-CCcCCCEEEeCCC
Confidence 21110 0000000 001 0 12477899999999888743221 1123578998876
No 103
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.67 E-value=1.9e-15 Score=146.26 Aligned_cols=217 Identities=14% Similarity=0.188 Sum_probs=139.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+||||||+||++++++|++.|. +|+++++. ..+.+.++. .++.++.+|++++ +.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~------~~ 66 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQADLDSLVREC---------PGIEPVCVDLGDW------EA 66 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCH------HH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHc---------CCCCEEEEeCCCH------HH
Confidence 4678999999999999999999999876 45555432 122222211 2456679999987 77
Q ss_pred HHHHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceecccccce
Q 042694 186 ADVIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 186 ~~~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~~~~~ 251 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++|++||...+....
T Consensus 67 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-- 144 (244)
T 3d3w_A 67 TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-- 144 (244)
T ss_dssp HHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--
T ss_pred HHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--
Confidence 777775 58999999997543 2467889999999999999888652 13 57899999976543211
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecc
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~ 328 (554)
.. . .|..+|...+.+++... ...|+++.++||+.|.++.
T Consensus 145 --------------------------~~------~------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 145 --------------------------NH------S------VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp --------------------------TB------H------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred --------------------------CC------c------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 11 1 12223333444433322 1248999999999998754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... .+... .....+..+ .....+++++|+|++++.++..... ...+++|++.++
T Consensus 187 ~~~--~~~~~-----~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 240 (244)
T 3d3w_A 187 GQA--TWSDP-----HKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSG--MTTGSTLPVEGG 240 (244)
T ss_dssp HHH--HSCST-----THHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhh--hccCh-----HHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 211 00000 000000000 0123688999999999988764321 223679999876
No 104
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.67 E-value=2.2e-16 Score=154.47 Aligned_cols=230 Identities=14% Similarity=0.130 Sum_probs=141.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+. ...++.++.+|++++ ++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~ 68 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA---TVAIADIDIERARQAAAE--------IGPAAYAVQMDVTRQ------DS 68 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCTTEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH--------hCCCceEEEeeCCCH------HH
Confidence 5689999999999999999999999886 45555432 22222222 234678999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... ++-.++|++||...+..
T Consensus 69 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 148 (259)
T 4e6p_A 69 IDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG 148 (259)
T ss_dssp HHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC
Confidence 776665 89999999997542 3567889999999999999988642 11458999999865432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.. ..|+++.+++||.|.++
T Consensus 149 ~~----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~vn~v~PG~v~t~ 191 (259)
T 4e6p_A 149 EA----------------------------LVAIYCATKAAV--------ISLTQSAGLDLI-KHRINVNAIAPGVVDGE 191 (259)
T ss_dssp CT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCBCST
T ss_pred CC----------------------------CChHHHHHHHHH--------HHHHHHHHHHhh-hcCCEEEEEEECCCccc
Confidence 11 111121111111 123333433332 24899999999999875
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
........... .... ..+.......+......+..++|+|++++.++..... .-.+++|++.++
T Consensus 192 ~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~--~itG~~i~vdgG 255 (259)
T 4e6p_A 192 HWDGVDALFAR------YENR-PRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESD--YIVSQTYNVDGG 255 (259)
T ss_dssp THHHHHHHHHH------HHTC-CTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGT--TCCSCEEEESTT
T ss_pred hhhhhhhhhhh------hccC-ChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC--CCCCCEEEECcC
Confidence 33211000000 0000 0000000001111234688999999998887654321 234689999887
No 105
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.66 E-value=8.6e-17 Score=151.57 Aligned_cols=184 Identities=10% Similarity=0.094 Sum_probs=126.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||||+||++++++|++. +|+++++.. .+.+.+.. .. .++.+|++++ +.++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~~~~~~~~~---------~~-~~~~~D~~~~------~~~~~ 59 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGALAELAREV---------GA-RALPADLADE------LEAKA 59 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHHHHHHHHHH---------TC-EECCCCTTSH------HHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHHHHHHHHhc---------cC-cEEEeeCCCH------HHHHH
Confidence 57999999999999999999975 667665432 22222211 11 7789999987 77877
Q ss_pred Hhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccC
Q 042694 189 IAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 189 l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+++ .+..+||++||..++....
T Consensus 60 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~sS~~~~~~~~--------- 129 (207)
T 2yut_A 60 LLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF-QKGARAVFFGAYPRYVQVP--------- 129 (207)
T ss_dssp HHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEEECCCHHHHSST---------
T ss_pred HHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh-cCCcEEEEEcChhhccCCC---------
Confidence 777 89999999997543 246788999999999999999965 3678999999987654311
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecccCCcccc
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
.. . .|..+|...+.+.+... ...|++++++|||.++++.. .+
T Consensus 130 -------------------~~------~------~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~---~~- 174 (207)
T 2yut_A 130 -------------------GF------A------AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW---AP- 174 (207)
T ss_dssp -------------------TB------H------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG---GG-
T ss_pred -------------------Cc------c------hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc---cc-
Confidence 11 1 12222333344433322 23589999999999977431 00
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH 384 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~ 384 (554)
. .....++++++|+|++++.++...
T Consensus 175 ---------------~---------~~~~~~~~~~~dva~~~~~~~~~~ 199 (207)
T 2yut_A 175 ---------------L---------GGPPKGALSPEEAARKVLEGLFRE 199 (207)
T ss_dssp ---------------G---------TSCCTTCBCHHHHHHHHHHHHC--
T ss_pred ---------------c---------CCCCCCCCCHHHHHHHHHHHHhCC
Confidence 0 011257899999999999887653
No 106
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.66 E-value=5.3e-15 Score=144.71 Aligned_cols=214 Identities=12% Similarity=0.073 Sum_probs=136.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.. ..++.++.+|++++ ++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~------~~ 67 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDEEGKAMAAEL--------ADAARYVHLDVTQP------AQ 67 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHT--------GGGEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------hcCceEEEecCCCH------HH
Confidence 4688999999999999999999999886 45555432 122222221 23578899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++.+.+... .+..++|++||...+...
T Consensus 68 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 147 (260)
T 1nff_A 68 WKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT 147 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC
Confidence 777665 89999999997543 3467889999999997666655321 256799999998664421
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+.. ..|+++.++|||.|.++.
T Consensus 148 ~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 148 V----------------------------ACHGYTATKFAV--------RGLTKSTALELG-PSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp T----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCBCSGG
T ss_pred C----------------------------CchhHHHHHHHH--------HHHHHHHHHHhC-ccCcEEEEEEeCCCCCCc
Confidence 1 011111111111 112333333322 248999999999998754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. +... . +. .. + ...+..++|+|++++.++..... ...+++|++.++
T Consensus 191 ~~----~~~~-----~-~~-----~~------~--~~~~~~~~dvA~~v~~l~s~~~~--~~~G~~~~v~gG 237 (260)
T 1nff_A 191 TD----WVPE-----D-IF-----QT------A--LGRAAEPVEVSNLVVYLASDESS--YSTGAEFVVDGG 237 (260)
T ss_dssp GT----TSCT-----T-CS-----CC------S--SSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cc----cchh-----h-HH-----hC------c--cCCCCCHHHHHHHHHHHhCcccc--CCcCCEEEECCC
Confidence 32 1000 0 00 00 0 12467889999999888754321 224689999887
No 107
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.66 E-value=9e-16 Score=151.11 Aligned_cols=231 Identities=11% Similarity=0.069 Sum_probs=141.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-h--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-E--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||||+||++++++|++.|. +|+++.+ . ..+.+.+.... ...++.++.+|++++ +
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~ 84 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSSKAAEEVVAELKK-----LGAQGVAIQADISKP------S 84 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------H
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCchHHHHHHHHHHHh-----cCCcEEEEEecCCCH------H
Confidence 4688999999999999999999999876 4555433 1 12222222110 235788999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceec-ccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVN-GQR 248 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~-~~~ 248 (554)
.++.+.+ ++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+-.++|++||..++ ...
T Consensus 85 ~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~ 164 (274)
T 1ja9_A 85 EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI 164 (274)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC
Confidence 7766665 89999999997542 2457789999999999999998763 111699999998765 321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
. .. . .|..+|...+.+.+.+. ...|+++.++|||.|.
T Consensus 165 ~----------------------------~~------~------~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~ 204 (274)
T 1ja9_A 165 P----------------------------NH------A------LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 204 (274)
T ss_dssp C----------------------------SC------H------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred C----------------------------CC------c------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 1 00 1 12223333334333222 1248999999999997
Q ss_pred ecccCCc-cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPF-SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~-~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++..... ...... ...... .......+ .+.....++++++|+|++++.++..... ...+++|++.++
T Consensus 205 t~~~~~~~~~~~~~--~~~~~~---~~~~~~~~-~~~~~~~~~~~~~dva~~i~~l~~~~~~--~~~G~~~~v~gG 272 (274)
T 1ja9_A 205 TDMFDENSWHYAPG--GYKGMP---QEKIDEGL-ANMNPLKRIGYPADIGRAVSALCQEESE--WINGQVIKLTGG 272 (274)
T ss_dssp SHHHHHHGGGTSTT--CCTTCC---HHHHHHHH-HHTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccchhccccccccc--ccccCc---hHHHHHHH-HhcCCCCCccCHHHHHHHHHHHhCcccc--cccCcEEEecCC
Confidence 6532110 000000 000000 00000000 0111224688999999999988764321 123579999876
No 108
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.66 E-value=1.2e-15 Score=148.79 Aligned_cols=220 Identities=13% Similarity=0.138 Sum_probs=138.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||||+||++++++|++.|. +|+++++ ...+.+.+.... ...++.++.+|++++ +
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 70 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA---KVGLHGRKAPANIDETIASMRA-----DGGDAAFFAADLATS------E 70 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCCTTHHHHHHHHHH-----TTCEEEEEECCTTSH------H
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEECCCchhhHHHHHHHHHh-----cCCceEEEECCCCCH------H
Confidence 4678999999999999999999999876 4555432 222333222211 134788999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCC-CC---c----hhhHHHHHHHhchHHHHHHHHHHHc--------CCCceEEEEee
Q 042694 185 LADVIAK-------EVDVIVNSAAN-TT---F----DERYDIAIDINTRGPCRLMEFAKQC--------NKLKLFVQVST 241 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~-v~---~----~~~~~~~~~~Nv~gt~~ll~la~~~--------~~~k~~v~vST 241 (554)
+.+.+.+ ++|+|||+||. .. + .+.++..+++|+.|+.++++.+... +...++|++||
T Consensus 71 ~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 150 (258)
T 3afn_B 71 ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGS 150 (258)
T ss_dssp HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecc
Confidence 7777665 89999999996 32 1 2457788999999999999877531 11268999999
Q ss_pred ceecc-cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEE
Q 042694 242 AYVNG-QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVV 317 (554)
Q Consensus 242 ~~v~~-~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~ 317 (554)
.+.+. .. +.. .. |..+|...+.+.+... ...|+++.
T Consensus 151 ~~~~~~~~----------------------------~~~------~~------Y~~sK~a~~~~~~~~~~e~~~~gi~v~ 190 (258)
T 3afn_B 151 IAGHTGGG----------------------------PGA------GL------YGAAKAFLHNVHKNWVDFHTKDGVRFN 190 (258)
T ss_dssp THHHHCCC----------------------------TTC------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhccCCC----------------------------CCc------hH------HHHHHHHHHHHHHHHHHhhcccCeEEE
Confidence 76543 11 111 11 2222333333333221 13489999
Q ss_pred EEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEe
Q 042694 318 IIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQI 397 (554)
Q Consensus 318 I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~ 397 (554)
++|||.|.++...... ......+..+ .....+++++|+|++++.++..... ....+++|++
T Consensus 191 ~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~-~~~~G~~~~v 251 (258)
T 3afn_B 191 IVSPGTVDTAFHADKT---------QDVRDRISNG---------IPMGRFGTAEEMAPAFLFFASHLAS-GYITGQVLDI 251 (258)
T ss_dssp EEEECSBSSGGGTTCC---------HHHHHHHHTT---------CTTCSCBCGGGTHHHHHHHHCHHHH-TTCCSEEEEE
T ss_pred EEeCCCcccccccccC---------HHHHHHHhcc---------CCCCcCCCHHHHHHHHHHHhCcchh-ccccCCEEeE
Confidence 9999999875432210 0000000000 1123688999999999988764321 0123589999
Q ss_pred eCC
Q 042694 398 ASS 400 (554)
Q Consensus 398 ~~~ 400 (554)
.++
T Consensus 252 ~gg 254 (258)
T 3afn_B 252 NGG 254 (258)
T ss_dssp STT
T ss_pred CCC
Confidence 876
No 109
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.66 E-value=8.6e-16 Score=152.13 Aligned_cols=248 Identities=13% Similarity=0.130 Sum_probs=154.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+..... .....++.++.+|++++ ++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~~~------~~ 77 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---SVMIVGRNPDKLAGAVQELEAL--GANGGAIRYEPTDITNE------DE 77 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTT--CCSSCEEEEEECCTTSH------HH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHHh--CCCCceEEEEeCCCCCH------HH
Confidence 5789999999999999999999999886 45555432 222222222110 00123788999999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+-.++|++||...+..
T Consensus 78 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 157 (281)
T 3svt_A 78 TARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT 157 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC
Confidence 666654 6899999999622 1 2467889999999999999988652 22348999999866433
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+.... .+++.++.+.. ..|+.+..++||.|.++
T Consensus 158 ~----------------------------~~~~~Y~asK~a~~--------~l~~~la~e~~-~~gi~vn~v~PG~v~t~ 200 (281)
T 3svt_A 158 H----------------------------RWFGAYGVTKSAVD--------HLMQLAADELG-ASWVRVNSIRPGLIRTD 200 (281)
T ss_dssp C----------------------------TTCTHHHHHHHHHH--------HHHHHHHHHHG-GGTEEEEEEEECSBCSG
T ss_pred C----------------------------CCChhHHHHHHHHH--------HHHHHHHHHhh-hcCeEEEEEEeCcCcCc
Confidence 1 11111222221111 23334433332 34799999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCccc-
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLV- 406 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it- 406 (554)
.... +... .........+ . -...+..++|+|++++.++..... .-.++++++.++ ..++
T Consensus 201 ~~~~---~~~~----~~~~~~~~~~-~--------p~~r~~~~~dva~~~~~l~s~~~~--~itG~~~~vdgG--~~~~~ 260 (281)
T 3svt_A 201 LVAA---ITES----AELSSDYAMC-T--------PLPRQGEVEDVANMAMFLLSDAAS--FVTGQVINVDGG--QMLRR 260 (281)
T ss_dssp GGHH---HHTC----HHHHHHHHHH-C--------SSSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--GGGSC
T ss_pred chhh---cccC----HHHHHHHHhc-C--------CCCCCCCHHHHHHHHHHHhCcccC--CCCCCEEEeCCC--hhccc
Confidence 3211 1000 0000000000 0 012456789999999888765332 224689999887 4555
Q ss_pred HHHHHHHHHhHhccCCC
Q 042694 407 FQDLARLLHEHYSASPC 423 (554)
Q Consensus 407 ~~e~~~~~~~~~~~~p~ 423 (554)
..++.+.+.+.++..+.
T Consensus 261 ~~~~~~~~~~~~~~~~~ 277 (281)
T 3svt_A 261 GPDFSAMLEPVFGRDAL 277 (281)
T ss_dssp CCCCHHHHHHHHCTTGG
T ss_pred CCcchhccccccCCccc
Confidence 66788888888876544
No 110
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.66 E-value=1.3e-15 Score=147.68 Aligned_cols=221 Identities=14% Similarity=0.087 Sum_probs=140.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+|+++||||+|+||++++++|++.|.+ |++.+. +..+.+.+.... ...++.++.+|++++ ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~~ 68 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYN---VAVNYAGSKEKAEAVVEEIKA-----KGVDSFAIQANVADA------DE 68 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHH-----TTSCEEEEECCTTCH------HH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 5789999999999999999999998864 444332 222233222211 235788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.......
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (246)
T 3osu_A 69 VKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN 148 (246)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC
Confidence 776665 79999999997542 3567889999999999999998321 356799999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+... .|+++..++||.|.++.
T Consensus 149 ~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~~-~gi~vn~v~PG~v~t~~ 191 (246)
T 3osu_A 149 P----------------------------GQANYVATKAGV--------IGLTKSAARELAS-RGITVNAVAPGFIVSDM 191 (246)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBGGGC
T ss_pred C----------------------------CChHHHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEEECCCcCCc
Confidence 1 111121111111 1234444443333 48999999999997754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....... ....... ..-...+...+|++++++.++..... .-.++++++.++
T Consensus 192 ~~~~~~~---------~~~~~~~---------~~p~~r~~~~~dva~~v~~l~s~~~~--~itG~~i~vdgG 243 (246)
T 3osu_A 192 TDALSDE---------LKEQMLT---------QIPLARFGQDTDIANTVAFLASDKAK--YITGQTIHVNGG 243 (246)
T ss_dssp CSCSCHH---------HHHHHHT---------TCTTCSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred ccccCHH---------HHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEeCCC
Confidence 3221110 0000000 11113466789999999887764332 234689999876
No 111
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.65 E-value=2.1e-15 Score=147.49 Aligned_cols=224 Identities=13% Similarity=0.060 Sum_probs=138.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-h--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-E--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++++|+||||||+||++++++|++.+. +|+++.+ . ..+.+.+.... ...++.++.+|++++ +
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~ 70 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKEDEANSVLEEIKK-----VGGEAIAVKGDVTVE------S 70 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHH-----TTCEEEEEECCTTSH------H
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEcCCChHHHHHHHHHHHh-----cCCceEEEECCCCCH------H
Confidence 4678999999999999999999999876 4555543 2 12222222110 234788999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceecc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNG 246 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~ 246 (554)
+.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+ ..++|++||.....
T Consensus 71 ~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~ 150 (261)
T 1gee_A 71 DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI 150 (261)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC
Confidence 6666655 79999999997543 2467889999999999998887642 12 56999999975432
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. +....|...+... ..+++.++.... ..|+++.++|||.|.+
T Consensus 151 ~~----------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t 193 (261)
T 1gee_A 151 PW----------------------------PLFVHYAASKGGM--------KLMTETLALEYA-PKGIRVNNIGPGAINT 193 (261)
T ss_dssp CC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECSBCS
T ss_pred CC----------------------------CCccHHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEeeCCcCC
Confidence 11 1111111111111 023333333332 2489999999999987
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+.... +... ......+.. .. + ...+++++|+|++++.++..... ...++++++.++
T Consensus 194 ~~~~~---~~~~----~~~~~~~~~-~~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg 249 (261)
T 1gee_A 194 PINAE---KFAD----PEQRADVES-MI------P--MGYIGEPEEIAAVAAWLASSEAS--YVTGITLFADGG 249 (261)
T ss_dssp GGGHH---HHHS----HHHHHHHHT-TC------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhh---cccC----hhHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccc--CCCCcEEEEcCC
Confidence 54311 1000 000000000 00 1 13478899999999888754321 224678998877
No 112
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.65 E-value=3.9e-15 Score=148.94 Aligned_cols=229 Identities=12% Similarity=0.198 Sum_probs=141.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+............++.++.+|++++ +.
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~------~~ 86 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE------EE 86 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH------HH
Confidence 5789999999999999999999999886 45555432 2222222211000001235789999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
++.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||....+.
T Consensus 87 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~- 165 (303)
T 1yxm_A 87 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF- 165 (303)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC-
Confidence 666654 59999999996432 2467788999999999999998651 13468999999862111
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....+...+... +.+++.++++... .|+++.++|||.|+++.
T Consensus 166 ----------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~~-~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 166 ----------------------------PLAVHSGAARAGV--------YNLTKSLALEWAC-SGIRINCVAPGVIYSQT 208 (303)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTGG-GTEEEEEEEECSBCCTG
T ss_pred ----------------------------CcchhhHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEecCCcccch
Confidence 1111121111111 2345555555443 48999999999998863
Q ss_pred c-CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 K-EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~-~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .....+... .. ....... + ...++.++|+|++++.++..... ...++++++.++
T Consensus 209 ~~~~~~~~~~~------~~----~~~~~~~---p--~~~~~~~~dvA~~i~~l~~~~~~--~~~G~~~~v~gG 264 (303)
T 1yxm_A 209 AVENYGSWGQS------FF----EGSFQKI---P--AKRIGVPEEVSSVVCFLLSPAAS--FITGQSVDVDGG 264 (303)
T ss_dssp GGTTSGGGGGG------GG----TTGGGGS---T--TSSCBCTHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhccccchH------HH----HHHHhcC---c--ccCCCCHHHHHHHHHHHhCcccc--cCCCcEEEECCC
Confidence 1 111111110 00 0000000 1 12477899999999988754321 234689999887
No 113
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.65 E-value=4.3e-15 Score=143.74 Aligned_cols=196 Identities=9% Similarity=0.106 Sum_probs=130.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCC---c-cEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPD---V-GKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~---V-~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+|+|+||||||+||++++++|++.+.. . .+|+++++. ..+.+.+.... ...++.++.+|++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------ 70 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----EGALTDTITADISDM------ 70 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----TTCEEEEEECCTTSH------
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-----cCCeeeEEEecCCCH------
Confidence 688999999999999999999998861 0 045555432 22333222211 235788999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
+..+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+.
T Consensus 71 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 150 (244)
T 2bd0_A 71 ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK 150 (244)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC
Confidence 66666654 79999999997543 3567889999999999999988531 2567999999987654
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccce
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSV 323 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~ 323 (554)
... .. .. |..+|...+.+.+... ...|+++.++|||.
T Consensus 151 ~~~----------------------------~~------~~------Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 190 (244)
T 2bd0_A 151 AFR----------------------------HS------SI------YCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 190 (244)
T ss_dssp CCT----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECC
T ss_pred CCC----------------------------CC------ch------hHHHHHHHHHHHHHHHHHhhccCcEEEEEECCC
Confidence 211 11 11 2222333333332221 23589999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHH
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQ 383 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~ 383 (554)
|.++.....+. . . ...+++++|+|++++.++..
T Consensus 191 v~t~~~~~~~~---------~----------------~--~~~~~~~~dva~~~~~l~~~ 223 (244)
T 2bd0_A 191 VYTPMWGKVDD---------E----------------M--QALMMMPEDIAAPVVQAYLQ 223 (244)
T ss_dssp BCSTTTCCCCS---------T----------------T--GGGSBCHHHHHHHHHHHHTS
T ss_pred ccchhhhhccc---------c----------------c--cccCCCHHHHHHHHHHHHhC
Confidence 98754321100 0 0 12578899999999988764
No 114
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.65 E-value=2.9e-15 Score=145.47 Aligned_cols=219 Identities=13% Similarity=0.116 Sum_probs=136.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHc-CCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTY-GKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~-~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+|+|+||||||+||++++++|++.+. +|+++++. ..+.+.+.. .. ...++.++.+|++++ ++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~ 67 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD---RVAALDLSAETLEETARTHWHA-----YADKVLRVRADVADE------GDV 67 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHSTT-----TGGGEEEEECCTTCH------HHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HHH
Confidence 67899999999999999999999875 45555432 222332222 11 134788999999987 777
Q ss_pred HHHhc-------CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
+.+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+.
T Consensus 68 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 147 (250)
T 2cfc_A 68 NAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV 147 (250)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc
Confidence 66665 79999999997542 2467889999999998777766431 2568999999986643
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccce
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSV 323 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~ 323 (554)
... .. .. |..+|...+.+.+... ...|+++.++|||.
T Consensus 148 ~~~----------------------------~~------~~------Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~ 187 (250)
T 2cfc_A 148 AFP----------------------------GR------SA------YTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGM 187 (250)
T ss_dssp CCT----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred CCC----------------------------Cc------hh------HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCc
Confidence 211 01 11 2222333333333222 12489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|+++.... .... .........+ . + ...+...+|++++++.++..... ...++++++.++
T Consensus 188 v~t~~~~~---~~~~----~~~~~~~~~~-~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 246 (250)
T 2cfc_A 188 IETPMTQW---RLDQ----PELRDQVLAR-I------P--QKEIGTAAQVADAVMFLAGEDAT--YVNGAALVMDGA 246 (250)
T ss_dssp BCSTTTHH---HHTS----HHHHHHHHTT-C------T--TCSCBCHHHHHHHHHHHHSTTCT--TCCSCEEEESTT
T ss_pred CccCcccc---ccCC----HHHHHHHHhc-C------C--CCCCcCHHHHHHHHHHHcCchhh--cccCCEEEECCc
Confidence 98854321 0100 0000000000 0 1 12467899999999888754321 223678988776
No 115
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.65 E-value=1.1e-15 Score=148.19 Aligned_cols=218 Identities=14% Similarity=0.118 Sum_probs=129.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++++|+||||||+||++++++|++.|. +|+++ ++ ...+.+.+.... ...++.++.+|++++ +
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~---~V~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 68 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA---NIVLNGSPASTSLDATAEEFKA-----AGINVVVAKGDVKNP------E 68 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECTTCSHHHHHHHHHHH-----TTCCEEEEESCTTSH------H
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCcCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH------H
Confidence 3578999999999999999999999876 45555 32 222222222110 234788999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
..+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||......
T Consensus 69 ~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 148 (247)
T 2hq1_A 69 DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG 148 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC
Confidence 7666655 79999999997542 2356788999999998888887642 25679999999744221
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHH----HHHHhhhhhcCCCcEEEEccce
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVA----QKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~a----e~l~e~~~~~~glp~~I~Rp~~ 323 (554)
.. .. .. |..+|... +.++.+.. ..++++.++|||.
T Consensus 149 ~~----------------------------~~------~~------Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~ 187 (247)
T 2hq1_A 149 NA----------------------------GQ------AN------YAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGI 187 (247)
T ss_dssp -------------------------------C------HH------HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred CC----------------------------CC------cH------hHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEE
Confidence 10 00 11 22223323 33333222 2489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+.++....++. ........ ......+++++|++++++.++..... ...+++|++.++
T Consensus 188 v~t~~~~~~~~---------~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 244 (247)
T 2hq1_A 188 IKTDMTDVLPD---------KVKEMYLN---------NIPLKRFGTPEEVANVVGFLASDDSN--YITGQVINIDGG 244 (247)
T ss_dssp BCCHHHHTSCH---------HHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred Eeccchhhcch---------HHHHHHHh---------hCCCCCCCCHHHHHHHHHHHcCcccc--cccCcEEEeCCC
Confidence 86542211110 00000000 01113578899999999887754321 123579999876
No 116
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.64 E-value=6.1e-15 Score=144.47 Aligned_cols=218 Identities=12% Similarity=0.072 Sum_probs=137.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.+. +|+++++ ...+.+.+.. ..++.++.+|++++ ++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~------~~ 72 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSGGEAQAKKL--------GNNCVFAPADVTSE------KD 72 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSSHHHHHHHH--------CTTEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcHhHHHHHHHh--------CCceEEEEcCCCCH------HH
Confidence 4689999999999999999999999876 4555543 2223332221 34788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------------hhhHHHHHHHhchHHHHHHHHHHHc-C--------CCceE
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------------DERYDIAIDINTRGPCRLMEFAKQC-N--------KLKLF 236 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~la~~~-~--------~~k~~ 236 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++... . +..++
T Consensus 73 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i 152 (265)
T 2o23_A 73 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVI 152 (265)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred HHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEE
Confidence 777665 89999999997532 3467889999999999999998753 1 45789
Q ss_pred EEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcE
Q 042694 237 VQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPV 316 (554)
Q Consensus 237 v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~ 316 (554)
|++||...+.... ....|...+..+ ..+++.++.+.. ..|+++
T Consensus 153 v~isS~~~~~~~~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v 195 (265)
T 2o23_A 153 INTASVAAFEGQV----------------------------GQAAYSASKGGI--------VGMTLPIARDLA-PIGIRV 195 (265)
T ss_dssp EEECCTHHHHCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEE
T ss_pred EEeCChhhcCCCC----------------------------CCchhHHHHHHH--------HHHHHHHHHHHh-hcCcEE
Confidence 9999986643211 011111111111 123344443332 248999
Q ss_pred EEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEE
Q 042694 317 VIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQ 396 (554)
Q Consensus 317 ~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn 396 (554)
.+++||.|.++.....+. . ...... ...+ ....++.++++|++++.++.... ..+++++
T Consensus 196 ~~v~Pg~v~t~~~~~~~~---~------~~~~~~-~~~~-------~~~~~~~~~dva~~~~~l~~~~~----~~G~~i~ 254 (265)
T 2o23_A 196 MTIAPGLFGTPLLTSLPE---K------VCNFLA-SQVP-------FPSRLGDPAEYAHLVQAIIENPF----LNGEVIR 254 (265)
T ss_dssp EEEEECCBCCC-------------------CHHH-HTCS-------SSCSCBCHHHHHHHHHHHHHCTT----CCSCEEE
T ss_pred EEEEeccccCccccccCH---H------HHHHHH-HcCC-------CcCCCCCHHHHHHHHHHHhhcCc----cCceEEE
Confidence 999999986643221110 0 000000 0010 00236788999999988875322 2357888
Q ss_pred eeCC
Q 042694 397 IASS 400 (554)
Q Consensus 397 ~~~~ 400 (554)
+.++
T Consensus 255 vdgG 258 (265)
T 2o23_A 255 LDGA 258 (265)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8776
No 117
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.64 E-value=1.1e-15 Score=149.72 Aligned_cols=233 Identities=12% Similarity=0.112 Sum_probs=140.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|++++ ++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~------~~ 71 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA---HIVLVARQVDRLHEAARSLK----EKFGVRVLEVAVDVATP------EG 71 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHCCCEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHH----HhcCCceEEEEcCCCCH------HH
Confidence 4678999999999999999999999876 45555432 1222222111 00134788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+...
T Consensus 72 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 151 (263)
T 3ai3_A 72 VDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL 151 (263)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC
Confidence 766665 79999999997532 3567889999999999999887531 256799999998765432
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+.. ..|+++.++|||.|.++.
T Consensus 152 ~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 152 W----------------------------YEPIYNVTKAAL--------MMFSKTLATEVI-KDNIRVNCINPGLILTPD 194 (263)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCBCCHH
T ss_pred C----------------------------CcchHHHHHHHH--------HHHHHHHHHHhh-hcCcEEEEEecCcccCcc
Confidence 1 011111111111 123333433332 248999999999998754
Q ss_pred cCCc-cccccCCCC-ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPF-SGWMEGNRM-MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~-~g~~~~~~~-~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... +.+...... ..........+.. + ...++.++|+|++++.++.... ....+++|++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p--~~~~~~~~dvA~~~~~l~s~~~--~~~~G~~~~vdgG 258 (263)
T 3ai3_A 195 WIKTAKELTKDNGGDWKGYLQSVADEHA------P--IKRFASPEELANFFVFLCSERA--TYSVGSAYFVDGG 258 (263)
T ss_dssp HHHHHHHHTTTTTCCHHHHHHHHHHHHC------T--TCSCBCHHHHHHHHHHHTSTTC--TTCCSCEEEESTT
T ss_pred hhhhhHhhhcccCCcHHHHHHHHHhcCC------C--CCCCcCHHHHHHHHHHHcCccc--cCCCCcEEEECCC
Confidence 3211 000000000 0000000000000 1 1357889999999988775422 1124689999887
No 118
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.64 E-value=2.7e-15 Score=146.07 Aligned_cols=220 Identities=12% Similarity=0.093 Sum_probs=136.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcE-EEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKL-VPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv-~~v~GDl~~~~lGLs~~ 184 (554)
.++++|+||||||+||++++++|++.|. +|+++++.. .+.+.+.. ..++ ..+.+|++++ +
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~ 71 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA---RLILIDREAAALDRAAQEL--------GAAVAARIVADVTDA------E 71 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH--------GGGEEEEEECCTTCH------H
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------cccceeEEEEecCCH------H
Confidence 4678999999999999999999999875 466654421 22222221 2356 7899999987 6
Q ss_pred HHHHHh------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 185 LADVIA------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 185 ~~~~l~------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
..+.+. .++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+...
T Consensus 72 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 151 (254)
T 2wsb_A 72 AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN 151 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC
Confidence 666655 479999999997543 3467888999999987777765321 257899999998664431
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
.+ .+.. . |..+|...+.+++... ...|+++.++|||.|+
T Consensus 152 ~~--------------------------~~~~------~------Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~ 193 (254)
T 2wsb_A 152 RP--------------------------QFAS------S------YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVA 193 (254)
T ss_dssp SS--------------------------SCBH------H------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred CC--------------------------Ccch------H------HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccC
Confidence 10 0001 1 2222333333333222 1248999999999998
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++....... . ...... ... ......+++++|+|++++.++..... ...++++++.++
T Consensus 194 t~~~~~~~~---~----~~~~~~----~~~-----~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 250 (254)
T 2wsb_A 194 TEMTLKMRE---R----PELFET----WLD-----MTPMGRCGEPSEIAAAALFLASPAAS--YVTGAILAVDGG 250 (254)
T ss_dssp SHHHHHHHT---C----HHHHHH----HHH-----TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhhcccc---C----hHHHHH----HHh-----cCCCCCCCCHHHHHHHHHHHhCcccc--cccCCEEEECCC
Confidence 754321110 0 000000 000 00013578899999999988754321 224678998776
No 119
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.64 E-value=1.2e-15 Score=147.66 Aligned_cols=219 Identities=16% Similarity=0.128 Sum_probs=131.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cch--hHHHHHHHcCCchhhhccCcEEE-EEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAE--LFKCLKQTYGKSYQAFMLSKLVP-AVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~--~~~~l~~~~~~~~~~~~~~kv~~-v~GDl~~~~lGLs~~~ 185 (554)
+|+|+||||||+||++++++|++.|. +|+++ ++. ..+.+.+.... ...++.. +.+|++++ +.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~---~v~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~ 66 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF---ALAIHYGQNREKAEEVAEEARR-----RGSPLVAVLGANLLEA------EA 66 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESSCHHHHHHHHHHHHH-----TTCSCEEEEECCTTSH------HH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHHHHHHHHHHh-----cCCceEEEEeccCCCH------HH
Confidence 47899999999999999999999875 45554 322 12222221110 1235566 89999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHH----HHHHcCCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLME----FAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~----la~~~~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++ .+++ .+..++|++||......
T Consensus 67 ~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~ 145 (245)
T 2ph3_A 67 ATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK-ARFGRIVNITSVVGILG 145 (245)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh-cCCCEEEEEeChhhccC
Confidence 665543 79999999997542 34678899999999555554 4444 35789999999754332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.. ..|++++++|||.|.++
T Consensus 146 ~~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~ 188 (245)
T 2ph3_A 146 NP----------------------------GQANYVASKAGL--------IGFTRAVAKEYA-QRGITVNAVAPGFIETE 188 (245)
T ss_dssp CS----------------------------SBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCH
T ss_pred CC----------------------------CCcchHHHHHHH--------HHHHHHHHHHHH-HcCeEEEEEEEEeecCc
Confidence 11 000111111111 123334433332 24899999999999775
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+. ........ .. + ...+++++|+|++++.++..... ...+++|++.++
T Consensus 189 ~~~~~~~---------~~~~~~~~-~~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg 241 (245)
T 2ph3_A 189 MTERLPQ---------EVKEAYLK-QI------P--AGRFGRPEEVAEAVAFLVSEKAG--YITGQTLCVDGG 241 (245)
T ss_dssp HHHTSCH---------HHHHHHHH-TC------T--TCSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred chhhcCH---------HHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccc--cccCCEEEECCC
Confidence 4321110 00000000 00 0 13578999999999887754321 123689999876
No 120
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.64 E-value=3.8e-15 Score=144.69 Aligned_cols=219 Identities=12% Similarity=0.088 Sum_probs=138.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ..++.++.+|++++ ++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~------~~ 68 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSDVGEKAAKSVGT------PDQIQFFQHDSSDE------DG 68 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHCC------TTTEEEEECCTTCH------HH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHhhc------cCceEEEECCCCCH------HH
Confidence 4678999999999999999999999876 45555432 22222222211 15789999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCC-ceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKL-KLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~-k~~v~vST~~v~~~ 247 (554)
++.+.+ .+|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .+. .++|++||...+..
T Consensus 69 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 148 (251)
T 1zk4_A 69 WTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148 (251)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC
Confidence 666654 59999999997532 346788999999998887776643 1 244 79999999866443
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh-----hcCCCcEEEEccc
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL-----ERGDIPVVIIRPS 322 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~-----~~~glp~~I~Rp~ 322 (554)
.. .. .. |..+|...+.+.+... ...|+++.++|||
T Consensus 149 ~~----------------------------~~------~~------Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg 188 (251)
T 1zk4_A 149 DP----------------------------SL------GA------YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG 188 (251)
T ss_dssp CT----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEC
T ss_pred CC----------------------------CC------cc------chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeC
Confidence 11 01 11 2222333333332211 1468999999999
Q ss_pred eeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|.++.....+. .... ... ........+++++|++++++.++..... ...++++++.++
T Consensus 189 ~v~t~~~~~~~~---------~~~~----~~~----~~~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 247 (251)
T 1zk4_A 189 YIKTPLVDDLPG---------AEEA----MSQ----RTKTPMGHIGEPNDIAYICVYLASNESK--FATGSEFVVDGG 247 (251)
T ss_dssp CBCCHHHHTSTT---------HHHH----HTS----TTTCTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cCcchhhhhcCc---------hhhh----HHH----hhcCCCCCCcCHHHHHHHHHHHcCcccc--cccCcEEEECCC
Confidence 998754322111 0000 000 0000113478999999999988764321 123678998876
No 121
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.64 E-value=5.7e-15 Score=145.47 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=135.3
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..++++|+||||+|+||++++++|++.|.+ |++. ++ +..+.+.+.... ...++.++.+|++++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------ 88 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWR---VGVNYAANREAADAVVAAITE-----SGGEAVAIPGDVGNA------ 88 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHH-----TTCEEEEEECCTTCH------
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCChhHHHHHHHHHHh-----cCCcEEEEEcCCCCH------
Confidence 356789999999999999999999998864 4433 22 222333222211 235789999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc-C-----CCceEEEEeec
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC-N-----KLKLFVQVSTA 242 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~-~-----~~k~~v~vST~ 242 (554)
++.+.+.+ .+|+|||+||.... .+.++..+++|+.|+..+++.+... . +..++|++||.
T Consensus 89 ~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~ 168 (272)
T 4e3z_A 89 ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM 168 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcch
Confidence 66666654 78999999997543 3467889999999999999988653 1 24589999997
Q ss_pred eecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccc
Q 042694 243 YVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPS 322 (554)
Q Consensus 243 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~ 322 (554)
....... +....|...+... ..+++.++.+.. ..|+++.+++||
T Consensus 169 ~~~~~~~---------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG 212 (272)
T 4e3z_A 169 AAILGSA---------------------------TQYVDYAASKAAI--------DTFTIGLAREVA-AEGIRVNAVRPG 212 (272)
T ss_dssp HHHHCCT---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred HhccCCC---------------------------CCcchhHHHHHHH--------HHHHHHHHHHHH-HcCcEEEEEecC
Confidence 6543211 0000111111111 123333433332 348999999999
Q ss_pred eeeecccCC--ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEP--FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p--~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|.++.... .+.+.. . ... ......+..++|+|++++.++..... ...+++|++.++
T Consensus 213 ~v~t~~~~~~~~~~~~~----------~----~~~-----~~~~~~~~~~edvA~~i~~l~s~~~~--~~tG~~i~vdgG 271 (272)
T 4e3z_A 213 IIETDLHASGGLPDRAR----------E----MAP-----SVPMQRAGMPEEVADAILYLLSPSAS--YVTGSILNVSGG 271 (272)
T ss_dssp SBC-------------------------------------CCTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CCcCCcccccCChHHHH----------H----Hhh-----cCCcCCCcCHHHHHHHHHHHhCCccc--cccCCEEeecCC
Confidence 997753321 011100 0 000 01112355689999999988754332 234689998775
No 122
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.64 E-value=1.3e-15 Score=142.98 Aligned_cols=185 Identities=16% Similarity=0.179 Sum_probs=124.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|+||||||+||++++++|+ ++. +|+++++.. + .+.+|++++ +..+.+.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~---~V~~~~r~~-----------------~---~~~~D~~~~------~~~~~~~ 53 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKA---EVITAGRHS-----------------G---DVTVDITNI------DSIKKMY 53 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTS---EEEEEESSS-----------------S---SEECCTTCH------HHHHHHH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCC---eEEEEecCc-----------------c---ceeeecCCH------HHHHHHH
Confidence 479999999999999999999 775 455554321 0 378999987 7777766
Q ss_pred c---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeeccccCC
Q 042694 191 K---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 191 ~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
+ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+-.++|++||.+.+....
T Consensus 54 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 123 (202)
T 3d7l_A 54 EQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIV---------- 123 (202)
T ss_dssp HHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCT----------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCC----------
Confidence 5 48999999996532 2456788899999999999999763 1126899999976533210
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh--cCCCcEEEEccceeeecccCCcccccc
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE--RGDIPVVIIRPSVIESTCKEPFSGWME 337 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~--~~glp~~I~Rp~~V~g~~~~p~~g~~~ 337 (554)
.. . .|..+|...+.+.+.... ..|+++.++||+.++++... +.
T Consensus 124 ------------------~~------~------~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----~~- 168 (202)
T 3d7l_A 124 ------------------QG------A------SAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK----LE- 168 (202)
T ss_dssp ------------------TC------H------HHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH----HG-
T ss_pred ------------------cc------H------HHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh----hh-
Confidence 00 1 122223344444443322 24899999999999875321 10
Q ss_pred CCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEe
Q 042694 338 GNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQI 397 (554)
Q Consensus 338 ~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~ 397 (554)
. .....++++++|+|++++.++. .. ..+++||+
T Consensus 169 -------------~---------~~~~~~~~~~~dva~~~~~~~~-~~----~~G~~~~v 201 (202)
T 3d7l_A 169 -------------P---------FFEGFLPVPAAKVARAFEKSVF-GA----QTGESYQV 201 (202)
T ss_dssp -------------G---------GSTTCCCBCHHHHHHHHHHHHH-SC----CCSCEEEE
T ss_pred -------------h---------hccccCCCCHHHHHHHHHHhhh-cc----ccCceEec
Confidence 0 0012468899999999887763 22 23578886
No 123
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.63 E-value=8.7e-15 Score=143.16 Aligned_cols=212 Identities=17% Similarity=0.153 Sum_probs=137.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+||||||+|+||++++++|++.|. +|++.++.. .. ....++.++.+|++++ ++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~-------~~-----~~~~~~~~~~~Dv~d~------~~v~ 84 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNY---RVVATSRSI-------KP-----SADPDIHTVAGDISKP------ETAD 84 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSC-------CC-----CSSTTEEEEESCTTSH------HHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCh-------hh-----cccCceEEEEccCCCH------HHHH
Confidence 5689999999999999999999999886 455554321 00 0223788999999988 7777
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH---cCCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ---CNKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~---~~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+.. -.+..++|++||..+.....+
T Consensus 85 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~ 164 (260)
T 3un1_A 85 RIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG 164 (260)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC
Confidence 6665 79999999997532 346788999999999999998732 135679999999765432110
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
++...+...+... ..+++.++.+.. ..|+++.+++||.|.++...
T Consensus 165 --------------------------~~~~~Y~~sKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~ 209 (260)
T 3un1_A 165 --------------------------MPSALASLTKGGL--------NAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHP 209 (260)
T ss_dssp --------------------------CCCHHHHHHHHHH--------HHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSC
T ss_pred --------------------------CccHHHHHHHHHH--------HHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCC
Confidence 1111111111111 123344443332 34899999999999775431
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+ ... .. .. ...-...+..++|+|++++.+.... ...++++++.++
T Consensus 210 ~--~~~------~~----~~---------~~~p~~r~~~~~dva~av~~L~~~~----~itG~~i~vdGG 254 (260)
T 3un1_A 210 A--ETH------ST----LA---------GLHPVGRMGEIRDVVDAVLYLEHAG----FITGEILHVDGG 254 (260)
T ss_dssp G--GGH------HH----HH---------TTSTTSSCBCHHHHHHHHHHHHHCT----TCCSCEEEESTT
T ss_pred H--HHH------HH----Hh---------ccCCCCCCcCHHHHHHHHHHhcccC----CCCCcEEEECCC
Confidence 1 000 00 00 0111234677999999998873222 234689999887
No 124
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.63 E-value=2.8e-15 Score=144.69 Aligned_cols=209 Identities=10% Similarity=0.063 Sum_probs=134.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||||+||++++++|++.+. +|+++++.. ..+++.++.+|++++ ++++.+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~---------------~~~~~~~~~~D~~~~------~~~~~~ 57 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRR---------------EGEDLIYVEGDVTRE------EDVRRA 57 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSC---------------CSSSSEEEECCTTCH------HHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEccCc---------------cccceEEEeCCCCCH------HHHHHH
Confidence 57899999999999999999999886 455554321 023457899999987 777777
Q ss_pred hc------CccEEEEcCCCCCch-----------hhHHHHHHHhchHHHHHHHHHHHc-CC--------CceEEEEeece
Q 042694 190 AK------EVDVIVNSAANTTFD-----------ERYDIAIDINTRGPCRLMEFAKQC-NK--------LKLFVQVSTAY 243 (554)
Q Consensus 190 ~~------~vdiViH~AA~v~~~-----------~~~~~~~~~Nv~gt~~ll~la~~~-~~--------~k~~v~vST~~ 243 (554)
++ ++|+|||+|+..... +.++..+++|+.|+.++++++... .. ..++|++||..
T Consensus 58 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 137 (242)
T 1uay_A 58 VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVA 137 (242)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTH
T ss_pred HHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChh
Confidence 66 899999999975431 278889999999999999998753 11 13899999987
Q ss_pred ecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 244 VNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 244 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
.+.... ....|...+... ..+++.++.+.. ..|+++.++|||.
T Consensus 138 ~~~~~~----------------------------~~~~Y~~sK~a~--------~~~~~~l~~e~~-~~gi~v~~v~Pg~ 180 (242)
T 1uay_A 138 AFEGQI----------------------------GQAAYAASKGGV--------VALTLPAARELA-GWGIRVVTVAPGL 180 (242)
T ss_dssp HHHCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred hccCCC----------------------------CCchhhHHHHHH--------HHHHHHHHHHHh-hcCcEEEEEEecc
Confidence 654321 011111111111 022333333322 2489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|+++.....+.. .......+ .+ ....+++++|+|++++.++.... ..+++|++.++
T Consensus 181 v~t~~~~~~~~~---------~~~~~~~~-~~-------~~~~~~~~~dva~~~~~l~~~~~----~~G~~~~v~gG 236 (242)
T 1uay_A 181 FDTPLLQGLPEK---------AKASLAAQ-VP-------FPPRLGRPEEYAALVLHILENPM----LNGEVVRLDGA 236 (242)
T ss_dssp CSSHHHHTSCHH---------HHHHHHTT-CC-------SSCSCCCHHHHHHHHHHHHHCTT----CCSCEEEESTT
T ss_pred Ccchhhhccchh---------HHHHHHhh-CC-------CcccCCCHHHHHHHHHHHhcCCC----CCCcEEEEcCC
Confidence 987543221110 00000000 00 00246789999999998876522 23579999877
No 125
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.63 E-value=4.3e-15 Score=144.28 Aligned_cols=220 Identities=15% Similarity=0.106 Sum_probs=135.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
..++++||||||||+||++++++|++.|. +|++.++. ..+.+.+. ...++..+.+|++++ +
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~ 73 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS---KVIISGSNEEKLKSLGNA--------LKDNYTIEVCNLANK------E 73 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCSSEEEEECCTTSH------H
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHH--------hccCccEEEcCCCCH------H
Confidence 36789999999999999999999999886 45555432 22333222 234788899999987 7
Q ss_pred HHHHHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccce
Q 042694 185 LADVIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 185 ~~~~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~ 251 (554)
..+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+....
T Consensus 74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 151 (249)
T 3f9i_A 74 ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP-- 151 (249)
T ss_dssp HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS--
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC--
Confidence 7777765 79999999997542 2467899999999999998887532 3456899999976643211
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP 331 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p 331 (554)
....|...+..+ ..+++.++.+.. ..|+++.+++||.|.++....
T Consensus 152 --------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~ 196 (249)
T 3f9i_A 152 --------------------------GQANYCASKAGL--------IGMTKSLSYEVA-TRGITVNAVAPGFIKSDMTDK 196 (249)
T ss_dssp --------------------------CSHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCBC------
T ss_pred --------------------------CCchhHHHHHHH--------HHHHHHHHHHHH-HcCcEEEEEecCccccCcccc
Confidence 111111111111 123344443332 348999999999996643321
Q ss_pred ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 332 FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 332 ~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... ....... ......+..++|+|++++.++..... .-.++++++.++
T Consensus 197 ~~~~---------~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~--~~tG~~~~vdgG 245 (249)
T 3f9i_A 197 LNEK---------QREAIVQ---------KIPLGTYGIPEDVAYAVAFLASNNAS--YITGQTLHVNGG 245 (249)
T ss_dssp CCHH---------HHHHHHH---------HCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cCHH---------HHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCCccC--CccCcEEEECCC
Confidence 1100 0000000 01123577899999999888765432 234689999876
No 126
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.63 E-value=7.6e-15 Score=142.35 Aligned_cols=222 Identities=11% Similarity=0.069 Sum_probs=141.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|++.++ ...+.+.+.... ...++.++.+|++++ ++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 68 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA---TVVGTATSQASAEKFENSMKE-----KGFKARGLVLNISDI------ES 68 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCH------HH
Confidence 3578999999999999999999999876 4555443 222233222211 235789999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.......
T Consensus 69 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (247)
T 3lyl_A 69 IQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN 148 (247)
T ss_dssp HHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence 666654 58999999997642 3567889999999999999887542 244689999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+... ..+++.++.+... .|+++..++||.|..+.
T Consensus 149 ----------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 149 ----------------------------PGQTNYCAAKAGV--------IGFSKSLAYEVAS-RNITVNVVAPGFIATDM 191 (247)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCTT
T ss_pred ----------------------------CCcHHHHHHHHHH--------HHHHHHHHHHHHH-cCeEEEEEeeCcEeccc
Confidence 1111111111111 1244444444333 48999999999996643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....+... .... ........+.+++|+|++++.++..... .-.++++++.++
T Consensus 192 ~~~~~~~~---------~~~~---------~~~~~~~~~~~~~dva~~i~~l~s~~~~--~~tG~~i~vdgG 243 (247)
T 3lyl_A 192 TDKLTDEQ---------KSFI---------ATKIPSGQIGEPKDIAAAVAFLASEEAK--YITGQTLHVNGG 243 (247)
T ss_dssp TTTSCHHH---------HHHH---------HTTSTTCCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhccHHH---------HHHH---------hhcCCCCCCcCHHHHHHHHHHHhCCCcC--CccCCEEEECCC
Confidence 32211100 0000 0111124578899999999888754332 234689999876
No 127
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.63 E-value=1.7e-14 Score=142.85 Aligned_cols=235 Identities=11% Similarity=0.080 Sum_probs=140.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+.+|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ....++.++.+|++++ +
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~d~------~ 89 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGAPDEIRTVTDEVAG----LSSGTVLHHPADMTKP------S 89 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCCHHHHHHHHHHHHT----TCSSCEEEECCCTTCH------H
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChHHHHHHHHHHhh----ccCCcEEEEeCCCCCH------H
Confidence 5679999999999999999999999886 55665542 22222222211 1245789999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||......
T Consensus 90 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 169 (281)
T 3v2h_A 90 EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA 169 (281)
T ss_dssp HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC
Confidence 7766654 79999999997532 3467889999999999999987421 24568999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+..+ ..+++.++.+... .|+++..++||.|.++
T Consensus 170 ~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~t~ 212 (281)
T 3v2h_A 170 S----------------------------PFKSAYVAAKHGI--------MGLTKTVALEVAE-SGVTVNSICPGYVLTP 212 (281)
T ss_dssp C----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCC-
T ss_pred C----------------------------CCchHHHHHHHHH--------HHHHHHHHHHhhh-cCcEEEEEECCCCcCc
Confidence 1 1111121111111 1234444443332 4899999999999775
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....... ......... ..........+......++.++|+|++++.++..... .-.++++++.++
T Consensus 213 ~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~--~itG~~i~vdGG 277 (281)
T 3v2h_A 213 LVEKQIP---DQARTRGIT---EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAA--QITGTHVSMDGG 277 (281)
T ss_dssp ---------------------------------CCTTCSCBCHHHHHHHHHHHHSSGGG--GCCSCEEEESTT
T ss_pred chhhhcc---hhhhhcCCC---HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcC--CCCCcEEEECCC
Confidence 4321110 000000000 0000000011122235688999999999888754332 124689998876
No 128
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.63 E-value=7.5e-15 Score=143.39 Aligned_cols=226 Identities=12% Similarity=0.139 Sum_probs=141.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|+++++ ...+.+.+.... ...++.++.+|++++ ++
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 69 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA---RVVITGRTKEKLEEAKLEIEQ-----FPGQILTVQMDVRNT------DD 69 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHCC-----STTCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 5689999999999999999999999886 4555543 223333333322 235789999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||......
T Consensus 70 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (257)
T 3imf_A 70 IQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA 149 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC
Confidence 666654 78999999996432 3567889999999999999988431 34568999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.....|+++..++||.|.++
T Consensus 150 ~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~~~gIrvn~v~PG~v~t~ 193 (257)
T 3imf_A 150 GP----------------------------GVIHSAAAKAGV--------LAMTKTLAVEWGRKYGIRVNAIAPGPIERT 193 (257)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHHHHHCCEEEEEEECCBSSC
T ss_pred CC----------------------------CcHHHHHHHHHH--------HHHHHHHHHHhccccCeEEEEEEECCCcCC
Confidence 11 111121111111 124445544433234899999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... ..|... ..... ... ..-...+..++|+|++++.++..... --.++++++.++
T Consensus 194 ~~~~-~~~~~~-~~~~~--------~~~-----~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 249 (257)
T 3imf_A 194 GGAD-KLWISE-EMAKR--------TIQ-----SVPLGRLGTPEEIAGLAYYLCSDEAA--YINGTCMTMDGG 249 (257)
T ss_dssp CCC---------CCSHH--------HHT-----TSTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cchh-hcccCH-HHHHH--------HHh-----cCCCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEECCC
Confidence 3211 001110 00000 000 00112467889999999888765332 224689999887
No 129
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.63 E-value=9.1e-15 Score=142.42 Aligned_cols=226 Identities=14% Similarity=0.165 Sum_probs=137.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||||+||++++++|++.|.+ +|+++++. ..+.+.+.. ...++.++.+|++++ .
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~~~~~~l~~~~-------~~~~~~~~~~D~~~~-----~ 68 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAIN-------PKVNITFHTYDVTVP-----V 68 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCHHHHHHHHHHC-------TTSEEEEEECCTTSC-----H
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchHHHHHHHHHhC-------CCceEEEEEEecCCC-----h
Confidence 46789999999999999999999998864 24544321 222332221 124788999999975 1
Q ss_pred HHHHHHh-------cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc-CC-----CceEEEEeeceecccccc
Q 042694 184 DLADVIA-------KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC-NK-----LKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~-----~k~~v~vST~~v~~~~~~ 250 (554)
++.+.+. .++|+|||+||... .+.++..+++|+.|+.++++.+... .+ ..++|++||...+....
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 146 (254)
T 1sby_A 69 AESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH- 146 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-
Confidence 3333333 37999999999754 4668889999999999999998652 11 35799999986653211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
....|...+... ..+++.++.... ..|+++.+++||.|.++...
T Consensus 147 ---------------------------~~~~Y~~sK~a~--------~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~ 190 (254)
T 1sby_A 147 ---------------------------QVPVYSASKAAV--------VSFTNSLAKLAP-ITGVTAYSINPGITRTPLVH 190 (254)
T ss_dssp ---------------------------TSHHHHHHHHHH--------HHHHHHHHHHHH-HHSEEEEEEEECSEESHHHH
T ss_pred ---------------------------CchHHHHHHHHH--------HHHHHHHHHHhc-cCCeEEEEEecCCccCcccc
Confidence 111111111111 112333332221 24899999999999775432
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCccc
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLV 406 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it 406 (554)
....|.... .... ... ....+.+++++|++++.++.. . ..+.+|++.++...+++
T Consensus 191 ~~~~~~~~~----~~~~----~~~--------~~~~~~~~~dvA~~i~~~~~~-~----~~G~~~~v~gG~~~~~~ 245 (254)
T 1sby_A 191 TFNSWLDVE----PRVA----ELL--------LSHPTQTSEQCGQNFVKAIEA-N----KNGAIWKLDLGTLEAIE 245 (254)
T ss_dssp SCCCGGGSC----TTHH----HHH--------TTSCCEEHHHHHHHHHHHHHH-C----CTTCEEEEETTEEEECC
T ss_pred ccchhhhhh----HHHH----HHH--------hcCCCCCHHHHHHHHHHHHHc-C----CCCCEEEEeCCceeEec
Confidence 222221100 0000 000 012344789999999887753 2 23579999887323333
No 130
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.62 E-value=7.4e-15 Score=143.91 Aligned_cols=223 Identities=13% Similarity=0.119 Sum_probs=139.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+|+|+||||+|+||++++++|++.|. +|+++ ++ ...+.+.+.... ...++.++.+|++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 71 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY---SVTVTYHSDTTAMETMKETYKD-----VEERLQFVQADVTKK------ED 71 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHTGG-----GGGGEEEEECCTTSH------HH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC---EEEEEcCCChHHHHHHHHHHHh-----cCCceEEEEecCCCH------HH
Confidence 468999999999999999999999886 44544 22 222333333221 235789999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCC--C---Cc----hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAAN--T---TF----DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~--v---~~----~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~ 245 (554)
.+.+++ ++|+|||+||. . .+ .+.++..+++|+.|+..+++.+ ++ .+..++|++||..+.
T Consensus 72 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~g~iv~iss~~~~ 150 (264)
T 3i4f_A 72 LHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK-QNFGRIINYGFQGAD 150 (264)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTTGG
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh-cCCCeEEEEeechhc
Confidence 766655 89999999993 2 11 3467889999999999999988 33 356799999987543
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
+... .+....|...+... ..+++.++.+.. ..|+++.+++||.|.
T Consensus 151 ~~~~--------------------------~~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~ 195 (264)
T 3i4f_A 151 SAPG--------------------------WIYRSAFAAAKVGL--------VSLTKTVAYEEA-EYGITANMVCPGDII 195 (264)
T ss_dssp GCCC--------------------------CTTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCCC
T ss_pred ccCC--------------------------CCCCchhHHHHHHH--------HHHHHHHHHHhh-hcCcEEEEEccCCcc
Confidence 2210 01111121111111 123344443332 248999999999998
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSV 401 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~ 401 (554)
++......... ... .... .-...+..++|+|++++.++..... .-.++++++.++.
T Consensus 196 t~~~~~~~~~~---------~~~----~~~~-----~p~~r~~~~~dva~~v~~l~s~~~~--~itG~~i~vdGG~ 251 (264)
T 3i4f_A 196 GEMKEATIQEA---------RQL----KEHN-----TPIGRSGTGEDIARTISFLCEDDSD--MITGTIIEVTGAV 251 (264)
T ss_dssp GGGGSCCHHHH---------HHC-----------------CCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESCSC
T ss_pred CccchhccHHH---------HHH----Hhhc-----CCCCCCcCHHHHHHHHHHHcCcccC--CCCCcEEEEcCce
Confidence 75443211100 000 0000 0112467889999999988765332 2346899998873
No 131
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.62 E-value=8.2e-15 Score=145.36 Aligned_cols=222 Identities=15% Similarity=0.137 Sum_probs=136.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.+. +|+++++ +..+.+.+.... ...++.++.+|++++ +.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~d~------~~ 107 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQKSCDSVVDEIKS-----FGYESSGYAGDVSKK------EE 107 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHHHHHHHHHHHHT-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEcCCHHHHHHHHHHHHh-----cCCceeEEECCCCCH------HH
Confidence 4678999999999999999999999875 4555542 222222222211 134788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+...
T Consensus 108 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 187 (285)
T 2c07_A 108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN 187 (285)
T ss_dssp HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC
Confidence 666653 79999999997542 3567889999999988888777531 256799999998654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+.. ..|+++.++|||.|.++.
T Consensus 188 ~----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 188 V----------------------------GQANYSSSKAGV--------IGFTKSLAKELA-SRNITVNAIAPGFISSDM 230 (285)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCC--
T ss_pred C----------------------------CCchHHHHHHHH--------HHHHHHHHHHHH-HhCcEEEEEEeCcEecCc
Confidence 1 000111111111 113334433332 248999999999997643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....+. ... ....... + ...++.++|+|++++.++..... ...++++++.++
T Consensus 231 ~~~~~~---------~~~----~~~~~~~---~--~~~~~~~~dvA~~~~~l~~~~~~--~~~G~~i~v~gG 282 (285)
T 2c07_A 231 TDKISE---------QIK----KNIISNI---P--AGRMGTPEEVANLACFLSSDKSG--YINGRVFVIDGG 282 (285)
T ss_dssp ---CCH---------HHH----HHHHTTC---T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhcCH---------HHH----HHHHhhC---C--CCCCCCHHHHHHHHHHHhCCCcC--CCCCCEEEeCCC
Confidence 221110 000 0000000 1 12478899999999888754321 123678988776
No 132
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.62 E-value=7.7e-15 Score=143.09 Aligned_cols=231 Identities=13% Similarity=0.060 Sum_probs=139.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++..-+...+.... ...++.++.+|++++ ++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~v~ 67 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA---NIVLNGFGDPAPALAEIAR-----HGVKAVHHPADLSDV------AQIE 67 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCCHHHHHHHHT-----TSCCEEEECCCTTSH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHHHHHHHHh-----cCCceEEEeCCCCCH------HHHH
Confidence 3578999999999999999999999876 4555543211222222111 134688899999987 7777
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+ ++ .+..++|++||...+....
T Consensus 68 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~ 146 (255)
T 2q2v_A 68 ALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-RNWGRIINIASVHGLVGST 146 (255)
T ss_dssp HHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcCchhccCCC
Confidence 7766 89999999997542 3567889999999887777665 33 3568999999986643211
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
....|...+... ..+++.++.+.. ..|+++.++|||.|.++..
T Consensus 147 ----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~ 189 (255)
T 2q2v_A 147 ----------------------------GKAAYVAAKHGV--------VGLTKVVGLETA-TSNVTCNAICPGWVLTPLV 189 (255)
T ss_dssp ----------------------------TBHHHHHHHHHH--------HHHHHHHHHHTT-TSSEEEEEEEESSBCCHHH
T ss_pred ----------------------------CchhHHHHHHHH--------HHHHHHHHHHhc-ccCcEEEEEeeCCCcCcch
Confidence 011111111111 123444444332 3489999999999977532
Q ss_pred CCccccccCCCC-ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRM-MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~-~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....-...... ...... .+.........+++++|+|++++.++..... ...+++|++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG 251 (255)
T 2q2v_A 190 QKQIDDRAANGGDPLQAQH--------DLLAEKQPSLAFVTPEHLGELVLFLCSEAGS--QVRGAAWNVDGG 251 (255)
T ss_dssp HHHHHHHHHHTCCHHHHHH--------HHHTTTCTTCCCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred hhhcccccccccchHHHHH--------HHHhccCCCCCCcCHHHHHHHHHHHhCCccC--CCCCCEEEECCC
Confidence 110000000000 000000 0000011123578999999999887754321 123679998876
No 133
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.62 E-value=1.3e-14 Score=141.65 Aligned_cols=218 Identities=12% Similarity=0.059 Sum_probs=133.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|. +|++++. +..+...++ ...++.++.+|++++ ++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~------~~ 67 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA---TVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNE------AD 67 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSCC--------------------CEEEECCTTCH------HH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCH------HH
Confidence 4689999999999999999999999886 4555432 212222111 134678899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-C--------CCceEEE
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-N--------KLKLFVQ 238 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~--------~~k~~v~ 238 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++++... . +..++|+
T Consensus 68 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~ 147 (257)
T 3tpc_A 68 ATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVN 147 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEE
Confidence 776665 89999999997632 3568889999999999999998753 1 3457999
Q ss_pred EeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEE
Q 042694 239 VSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVI 318 (554)
Q Consensus 239 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I 318 (554)
+||...+.... ....|...+... ..+++.++.+... .|+++..
T Consensus 148 isS~~~~~~~~----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~vn~ 190 (257)
T 3tpc_A 148 TASIAAFDGQI----------------------------GQAAYAASKGGV--------AALTLPAARELAR-FGIRVVT 190 (257)
T ss_dssp ECCTHHHHCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEE
T ss_pred EechhhccCCC----------------------------CCcchHHHHHHH--------HHHHHHHHHHHHH-cCeEEEE
Confidence 99976643211 111121111111 1234444443332 4899999
Q ss_pred EccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEee
Q 042694 319 IRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIA 398 (554)
Q Consensus 319 ~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~ 398 (554)
++||.|.++.....+... ...... ..+ ....+..++|++++++.++.... -.++++++.
T Consensus 191 v~PG~v~t~~~~~~~~~~---------~~~~~~-~~p-------~~~r~~~~~dva~~v~~l~s~~~----itG~~i~vd 249 (257)
T 3tpc_A 191 IAPGIFDTPMMAGMPQDV---------QDALAA-SVP-------FPPRLGRAEEYAALVKHICENTM----LNGEVIRLD 249 (257)
T ss_dssp EEECCBSCC-----------------------C-CSS-------SSCSCBCHHHHHHHHHHHHHCTT----CCSCEEEES
T ss_pred EEeCCCCChhhccCCHHH---------HHHHHh-cCC-------CCCCCCCHHHHHHHHHHHcccCC----cCCcEEEEC
Confidence 999999764432211100 000000 000 00246788999999988876422 246899988
Q ss_pred CC
Q 042694 399 SS 400 (554)
Q Consensus 399 ~~ 400 (554)
++
T Consensus 250 GG 251 (257)
T 3tpc_A 250 GA 251 (257)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 134
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.62 E-value=6.6e-15 Score=143.99 Aligned_cols=227 Identities=13% Similarity=0.085 Sum_probs=138.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 72 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQKELNDCLTQWRS-----KGFKVEASVCDLSSR------SE 72 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HH
Confidence 4689999999999999999999999886 45555432 12222222110 134788999999987 76
Q ss_pred HHHHh--------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIA--------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+. .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+..
T Consensus 73 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (260)
T 2ae2_A 73 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA 152 (260)
T ss_dssp HHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence 66665 479999999997542 3467889999999999999988431 35679999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+... ..+++.++.+.. ..|+++.+++||.|.++
T Consensus 153 ~----------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 153 V----------------------------PYEAVYGATKGAM--------DQLTRCLAFEWA-KDNIRVNGVGPGVIATS 195 (260)
T ss_dssp C----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTG-GGTEEEEEEEECSBCSH
T ss_pred C----------------------------CCcchHHHHHHHH--------HHHHHHHHHHHh-hcCcEEEEEecCCCCCc
Confidence 1 1111111111111 012333333322 24899999999999664
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... .+.... .....+.... +......++.++|+|++++.++..... ...++++++.++
T Consensus 196 ~~~---~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdgG 253 (260)
T 2ae2_A 196 LVE---MTIQDP-EQKENLNKLI---------DRCALRRMGEPKELAAMVAFLCFPAAS--YVTGQIIYVDGG 253 (260)
T ss_dssp HHH---HHTTSH-HHHHHHHHHH---------HTSTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chh---hhccCh-hhHHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 221 100000 0000000000 000113478899999999887754321 224688998877
No 135
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.62 E-value=3.6e-15 Score=145.86 Aligned_cols=224 Identities=14% Similarity=0.108 Sum_probs=138.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~ 77 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGA---HVVVSSRKQENVDRTVATLQG-----EGLSVTGTVCHVGKA------ED 77 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEccCCCH------HH
Confidence 5689999999999999999999999876 45555432 12222222110 134688899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+..++|++||...+..
T Consensus 78 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 157 (260)
T 2zat_A 78 RERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP 157 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC
Confidence 666654 7999999999643 1 2467889999999999998887531 35679999999876543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.. ..|+++.+++||.|..+
T Consensus 158 ~~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~ 200 (260)
T 2zat_A 158 FP----------------------------NLGPYNVSKTAL--------LGLTKNLAVELA-PRNIRVNCLAPGLIKTN 200 (260)
T ss_dssp CT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCSS
T ss_pred CC----------------------------CchhHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEEECcccCc
Confidence 11 111121111111 123334433332 24899999999998654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... .|.+. ........ .. ....+.+++|+|++++.++..... -..++++++.++
T Consensus 201 ~~~~--~~~~~-----~~~~~~~~-~~--------~~~~~~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG 255 (260)
T 2zat_A 201 FSQV--LWMDK-----ARKEYMKE-SL--------RIRRLGNPEDCAGIVSFLCSEDAS--YITGETVVVGGG 255 (260)
T ss_dssp TTHH--HHSSH-----HHHHHHHH-HH--------TCSSCBCGGGGHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred cchh--cccCh-----HHHHHHHh-cC--------CCCCCCCHHHHHHHHHHHcCcccC--CccCCEEEECCC
Confidence 3210 01000 00000000 00 013578899999999887754321 123689999887
No 136
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.62 E-value=7e-15 Score=145.54 Aligned_cols=237 Identities=14% Similarity=0.081 Sum_probs=143.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----------hHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
+++|+++||||+|+||+++++.|++.|. +|++.++. ..+.+.+.... ......++.++.+|+++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGA---DIAICDRCENSDVVGYPLATADDLAETVAL--VEKTGRRCISAKVDVKD 82 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHHHHHH--HHHTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCccccccccccccHHHHHHHHHH--HHhcCCeEEEEeCCCCC
Confidence 5789999999999999999999999886 45554431 01222211110 01124578999999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEE
Q 042694 177 NNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQV 239 (554)
Q Consensus 177 ~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~v 239 (554)
+ ++.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++
T Consensus 83 ~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 156 (281)
T 3s55_A 83 R------AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTV 156 (281)
T ss_dssp H------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred H------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 8 77766664 79999999997542 3567899999999999999987431 245689999
Q ss_pred eeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEE
Q 042694 240 STAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVII 319 (554)
Q Consensus 240 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~ 319 (554)
||...+.... ....|...+... ..+++.++.+.. ..|+++..+
T Consensus 157 sS~~~~~~~~----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~vn~v 199 (281)
T 3s55_A 157 SSMLGHSANF----------------------------AQASYVSSKWGV--------IGLTKCAAHDLV-GYGITVNAV 199 (281)
T ss_dssp CCGGGGSCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHTG-GGTEEEEEE
T ss_pred CChhhcCCCC----------------------------CCchhHHHHHHH--------HHHHHHHHHHHh-hcCcEEEEE
Confidence 9976543211 111121111111 123444444333 248999999
Q ss_pred ccceeeecccCCcc---ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEE
Q 042694 320 RPSVIESTCKEPFS---GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQ 396 (554)
Q Consensus 320 Rp~~V~g~~~~p~~---g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn 396 (554)
+||.|.++...... .+... ...+.. ......+.........+..++|+|++++.++..... .-.+++++
T Consensus 200 ~PG~v~t~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~--~itG~~i~ 271 (281)
T 3s55_A 200 APGNIETPMTHNDFVFGTMRPD--LEKPTL----KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASS--HITGTVLP 271 (281)
T ss_dssp EECSBCSTTTSSHHHHHC---------CCH----HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred ecCcccCccccchhhhcccccc--ccccch----hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCccc--CCCCCEEE
Confidence 99999876442100 00000 000000 000000000011125688999999999988765332 23468999
Q ss_pred eeCC
Q 042694 397 IASS 400 (554)
Q Consensus 397 ~~~~ 400 (554)
+.++
T Consensus 272 vdgG 275 (281)
T 3s55_A 272 IDAG 275 (281)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9887
No 137
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.62 E-value=6.1e-15 Score=144.51 Aligned_cols=230 Identities=13% Similarity=0.136 Sum_probs=138.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++.. +.+.+.... ...++.++.+|++++ ++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~D~~d~------~~v~ 74 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA---TVAIADLDV-MAAQAVVAG-----LENGGFAVEVDVTKR------ASVD 74 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHHT-----CTTCCEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----HhcCCeEEEEeCCCH------HHHH
Confidence 4688999999999999999999999886 455554321 222221111 122678899999987 7777
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~~~ 249 (554)
.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+ ..++|++||.......
T Consensus 75 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 153 (263)
T 3ak4_A 75 AAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA- 153 (263)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-
Confidence 6665 89999999997542 2467889999999999999988642 12 5799999997653321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+.. ..|+++.++|||.|.++..
T Consensus 154 ---------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~ 197 (263)
T 3ak4_A 154 ---------------------------PLLAHYSASKFAV--------FGWTQALAREMA-PKNIRVNCVCPGFVKTAMQ 197 (263)
T ss_dssp ---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECSBTTHHH
T ss_pred ---------------------------CCchhHHHHHHHH--------HHHHHHHHHHHh-HcCeEEEEEecccccChhh
Confidence 1111111111111 123334433332 2489999999999976532
Q ss_pred CCccccc--cCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWM--EGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~--~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+. ............+.. ......++.++|+|++++.++..... ...+++|++.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdgG 259 (263)
T 3ak4_A 198 EREIIWEAELRGMTPEAVRAEYVS---------LTPLGRIEEPEDVADVVVFLASDAAR--FMTGQGINVTGG 259 (263)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred hhhccccccccccCcHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEECcC
Confidence 1100000 000000000000000 00113578899999999888764321 224679999876
No 138
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.61 E-value=9.9e-15 Score=142.95 Aligned_cols=225 Identities=12% Similarity=0.050 Sum_probs=140.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ....++.++.+|++++ ++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~Dv~~~------~~ 74 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA---NVAVAGRSTADIDACVADLDQ----LGSGKVIGVQTDVSDR------AQ 74 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHT----TSSSCEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh----hCCCcEEEEEcCCCCH------HH
Confidence 5789999999999999999999999886 45555432 22222222211 1125789999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 75 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 154 (262)
T 3pk0_A 75 CDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG 154 (262)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC
Confidence 766654 89999999997532 3567888999999999999988653 245799999997542110
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
.+....|...+... ..+++.++.+... .|+++..++||.|.++.
T Consensus 155 ---------------------------~~~~~~Y~asK~a~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 155 ---------------------------YPGWSHYGATKAAQ--------LGFMRTAAIELAP-HKITVNAIMPGNIMTEG 198 (262)
T ss_dssp ---------------------------CTTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCCHH
T ss_pred ---------------------------CCCChhhHHHHHHH--------HHHHHHHHHHHHh-hCcEEEEEEeCcCcCcc
Confidence 01111122112111 1233444433332 48999999999997743
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSV 401 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~ 401 (554)
...... ........ .. + .-.+...+|+|++++.++..... --.++++++.++.
T Consensus 199 ~~~~~~---------~~~~~~~~-~~------p--~~r~~~p~dva~~v~~L~s~~~~--~itG~~i~vdGG~ 251 (262)
T 3pk0_A 199 LLENGE---------EYIASMAR-SI------P--AGALGTPEDIGHLAAFLATKEAG--YITGQAIAVDGGQ 251 (262)
T ss_dssp HHTTCH---------HHHHHHHT-TS------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred ccccCH---------HHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccc--CCcCCEEEECCCe
Confidence 211000 00000000 00 0 12356789999999888765331 2346899998873
No 139
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.61 E-value=1.3e-14 Score=141.58 Aligned_cols=223 Identities=15% Similarity=0.108 Sum_probs=141.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|. +|++.++ ...+.+.+.... ...++..+.+|++++ ++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~~ 75 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA---SVVVTDLKSEGAEAVAAAIRQ-----AGGKAIGLECNVTDE------QH 75 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC---EEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH------HH
Confidence 5789999999999999999999999986 4555543 222333222211 235789999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 76 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 154 (256)
T 3gaf_A 76 REAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN- 154 (256)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-
Confidence 666654 79999999997542 3567889999999999999988531 245699999997654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+.. ..|+.+..++||.|..+..
T Consensus 155 ---------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~ 198 (256)
T 3gaf_A 155 ---------------------------VRMASYGSSKAAV--------NHLTRNIAFDVG-PMGIRVNAIAPGAIKTDAL 198 (256)
T ss_dssp ---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCBCCHHH
T ss_pred ---------------------------CCchHHHHHHHHH--------HHHHHHHHHHHh-hhCcEEEEEEEccccCchh
Confidence 1111122111111 123444443333 2489999999999866422
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. +.. ........ ...-...+..++|+|++++.++..... --.++++++.++
T Consensus 199 ~~---~~~-----~~~~~~~~---------~~~p~~r~~~~~dva~~~~~L~s~~~~--~itG~~i~vdgG 250 (256)
T 3gaf_A 199 AT---VLT-----PEIERAML---------KHTPLGRLGEAQDIANAALFLCSPAAA--WISGQVLTVSGG 250 (256)
T ss_dssp HH---HCC-----HHHHHHHH---------TTCTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hh---ccC-----HHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHcCCccc--CccCCEEEECCC
Confidence 10 000 00000000 011113467889999999988764332 234689999887
No 140
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.61 E-value=2.9e-15 Score=147.38 Aligned_cols=124 Identities=12% Similarity=0.028 Sum_probs=92.0
Q ss_pred cCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILR-TVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~-~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++|+||||||+||++++++|++ .+. +|+++.+. ..+.+.+.... ...++.++.+|++++ +.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~ 68 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVTRGQAAVQQLQA-----EGLSPRFHQLDIDDL------QS 68 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHHHHHHHHHHHHH-----TTCCCEEEECCTTCH------HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC---eEEEEeCChHHHHHHHHHHHh-----cCCeeEEEECCCCCH------HH
Confidence 578999999999999999999999 775 45555432 12222222110 124688899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||..++.
T Consensus 69 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~ 144 (276)
T 1wma_A 69 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR 144 (276)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhc
Confidence 776665 89999999997532 3667889999999999999999863 1224899999987753
No 141
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.61 E-value=4.7e-14 Score=139.48 Aligned_cols=229 Identities=17% Similarity=0.121 Sum_probs=141.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---------------hhHHHHHHHcCCchhhhccCcEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---------------ELFKCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---------------~~~~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+++|+|+||||+|+||++++++|++.|. +|++++. ...+.+.+.... ...++..+.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 84 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA---DIIACDICAPVSASVTYAPASPEDLDETARLVED-----QGRKALTRVL 84 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-----TTCCEEEEEC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeccccccccccccccCHHHHHHHHHHHHh-----cCCeEEEEEc
Confidence 6789999999999999999999999886 4555432 122222222211 2457889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCc
Q 042694 173 NVCENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLK 234 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k 234 (554)
|++++ ++.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... ++-.
T Consensus 85 Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g 158 (280)
T 3pgx_A 85 DVRDD------AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGG 158 (280)
T ss_dssp CTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence 99988 77766654 79999999998652 3567889999999999999988532 2246
Q ss_pred eEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCC
Q 042694 235 LFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDI 314 (554)
Q Consensus 235 ~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~gl 314 (554)
++|++||...+.... ....|...+..+ ..+++.++.+... .|+
T Consensus 159 ~iv~isS~~~~~~~~----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi 201 (280)
T 3pgx_A 159 SIVVVSSSAGLKATP----------------------------GNGHYSASKHGL--------TALTNTLAIELGE-YGI 201 (280)
T ss_dssp EEEEECCGGGTSCCT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTE
T ss_pred EEEEEcchhhccCCC----------------------------CchhHHHHHHHH--------HHHHHHHHHHhhh-cCe
Confidence 899999976543211 111122112111 1234444443332 489
Q ss_pred cEEEEccceeeecccCCc--cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCC
Q 042694 315 PVVIIRPSVIESTCKEPF--SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDI 392 (554)
Q Consensus 315 p~~I~Rp~~V~g~~~~p~--~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~ 392 (554)
++..++||.|.++...+. ..+... .+.. .. ..+.. ......+..++|+|++++.++..... .-.+
T Consensus 202 ~vn~v~PG~v~t~~~~~~~~~~~~~~----~~~~---~~-~~~~~---~~~~~r~~~p~dvA~~v~~L~s~~~~--~itG 268 (280)
T 3pgx_A 202 RVNSIHPYSVETPMIEPEAMMEIFAR----HPSF---VH-SFPPM---PVQPNGFMTADEVADVVAWLAGDGSG--TLTG 268 (280)
T ss_dssp EEEEEEECSBCSTTCCHHHHHHHHHH----CGGG---GG-GSCCB---TTBCSSCBCHHHHHHHHHHHHSGGGT--TCSS
T ss_pred EEEEEeeCcccCcccchhhhhhhhhc----Cchh---hh-hhhhc---ccCCCCCCCHHHHHHHHHHHhCcccc--CCCC
Confidence 999999999977543210 000000 0000 00 00000 11112478899999999888765331 2346
Q ss_pred eEEEeeCC
Q 042694 393 NVYQIASS 400 (554)
Q Consensus 393 ~vyn~~~~ 400 (554)
+++++.++
T Consensus 269 ~~i~vdGG 276 (280)
T 3pgx_A 269 TQIPVDKG 276 (280)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89998876
No 142
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.61 E-value=1.4e-14 Score=140.36 Aligned_cols=222 Identities=16% Similarity=0.142 Sum_probs=136.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||||+||++++++|++.|. +|+++.+ ...+.+.+.... ...++.++.+|++++ +
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 67 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA---NVVVNYAGNEQKANEVVDEIKK-----LGSDAIAVRADVANA------E 67 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------H
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------H
Confidence 3578999999999999999999999886 4555433 112222222110 134788999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||......
T Consensus 68 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (246)
T 2uvd_A 68 DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG 147 (246)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC
Confidence 7766655 79999999997542 3467889999999977777665421 25679999999755332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+... .|+++.+++||.|..+
T Consensus 148 ~~----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~~-~gi~v~~v~Pg~v~t~ 190 (246)
T 2uvd_A 148 NP----------------------------GQANYVAAKAGV--------IGLTKTSAKELAS-RNITVNAIAPGFIATD 190 (246)
T ss_dssp CT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBGGG
T ss_pred CC----------------------------CCchHHHHHHHH--------HHHHHHHHHHhhh-cCeEEEEEEeccccCc
Confidence 10 011111111111 1244455444333 4899999999999654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+. ..... ..... + ...++..+|+|++++.++..... -..++++++.++
T Consensus 191 ~~~~~~~---------~~~~~----~~~~~---p--~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG 243 (246)
T 2uvd_A 191 MTDVLDE---------NIKAE----MLKLI---P--AAQFGEAQDIANAVTFFASDQSK--YITGQTLNVDGG 243 (246)
T ss_dssp CSSCCCT---------THHHH----HHHTC---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhcCH---------HHHHH----HHhcC---C--CCCCcCHHHHHHHHHHHcCchhc--CCCCCEEEECcC
Confidence 3221110 00000 00000 1 12478899999999888754321 223678888776
No 143
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.61 E-value=1.8e-14 Score=140.82 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=133.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.++ ...++..+.+|++++ ++
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~ 69 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA---KVVIVDRDKAGAERVAGE--------IGDAALAVAADISKE------AD 69 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCTTEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHH--------hCCceEEEEecCCCH------HH
Confidence 4689999999999999999999999875 45655432 22333322 235788999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHcC-------CCceEEEEeece
Q 042694 186 ADVIAK-------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQCN-------KLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~~-------~~k~~v~vST~~ 243 (554)
.+.+.+ .+|++||+||... -.+.++..+++|+.|+.++++.+...- +..++|++||..
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~ 149 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTG 149 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchh
Confidence 666654 7899999999754 135678899999999999988875421 133699999976
Q ss_pred ecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 244 VNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 244 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
.+... +....|...+..+ ..+++.++.+... .|+.+..++||.
T Consensus 150 ~~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~v~~v~PG~ 192 (261)
T 3n74_A 150 AGRPR----------------------------PNLAWYNATKGWV--------VSVTKALAIELAP-AKIRVVALNPVA 192 (261)
T ss_dssp TTSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEEC-
T ss_pred hcCCC----------------------------CCccHHHHHHHHH--------HHHHHHHHHHhhh-cCcEEEEEecCc
Confidence 54321 1111122112111 1234444443333 489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+......+-. ....... . .+......++.++|+|++++.++..... .-.++++++.++
T Consensus 193 v~t~~~~~~~~~~-----~~~~~~~----~-----~~~~~~~~~~~~~dva~~~~~l~s~~~~--~itG~~i~vdgG 253 (261)
T 3n74_A 193 GETPLLTTFMGED-----SEEIRKK----F-----RDSIPMGRLLKPDDLAEAAAFLCSPQAS--MITGVALDVDGG 253 (261)
T ss_dssp --------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred ccChhhhhhcccC-----cHHHHHH----H-----hhcCCcCCCcCHHHHHHHHHHHcCCccc--CcCCcEEEecCC
Confidence 9765432111100 0000000 0 0111123578899999999887754321 234689999887
No 144
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.61 E-value=2.6e-14 Score=139.21 Aligned_cols=220 Identities=14% Similarity=0.032 Sum_probs=135.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++.. +++.+.... ...++.++.+|++++ ++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~ 67 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLD-EEGAATARE-----LGDAARYQHLDVTIE------EDWQ 67 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHHT-----TGGGEEEEECCTTCH------HHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----hCCceeEEEecCCCH------HHHH
Confidence 4678999999999999999999999886 455554321 222221111 124688899999987 7776
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ ++|++||+|+.... .+.++..+++|+.|+..+.+.+ ++ .+..++|++||...+....
T Consensus 68 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~ 146 (254)
T 1hdc_A 68 RVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD-AGGGSIVNISSAAGLMGLA 146 (254)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCCEEEEECchhhccCCC
Confidence 6665 89999999997542 3467889999999998655544 33 2567999999986643211
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
....|...+... ..+++.++.+.. ..|+++.++|||.|.++..
T Consensus 147 ----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~ 189 (254)
T 1hdc_A 147 ----------------------------LTSSYGASKWGV--------RGLSKLAAVELG-TDRIRVNSVHPGMTYTPMT 189 (254)
T ss_dssp ----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCHHH
T ss_pred ----------------------------CchhHHHHHHHH--------HHHHHHHHHHhh-hcCeEEEEEecccCcCccc
Confidence 111121111111 123334433332 3489999999999977532
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccc-hhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVV-PADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~v-pVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+ .. .... ..... + ...+. +.+|+|++++.++..... ...++++++.++
T Consensus 190 ~~~~---~~--~~~~--------~~~~~---p--~~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdgG 241 (254)
T 1hdc_A 190 AETG---IR--QGEG--------NYPNT---P--MGRVGNEPGEIAGAVVKLLSDTSS--YVTGAELAVDGG 241 (254)
T ss_dssp HHHT---CC--CSTT--------SCTTS---T--TSSCB-CHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccc---hh--HHHH--------HHhcC---C--CCCCCCCHHHHHHHHHHHhCchhc--CCCCCEEEECCC
Confidence 1110 00 0000 00000 1 11356 889999999988765321 224688998876
No 145
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.61 E-value=3.3e-14 Score=138.11 Aligned_cols=223 Identities=13% Similarity=0.072 Sum_probs=133.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|+||||||+||++++++|++.|. +|+++++...+++.+... ....++..+.+|++++ ++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~------~~v~ 70 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAPEAEAAIR-----NLGRRVLTVKCDVSQP------GDVE 70 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCHHHHHHHH-----HTTCCEEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCchhHHHHHHH-----hcCCcEEEEEeecCCH------HHHH
Confidence 4678999999999999999999999886 455554322122222110 0234788999999987 6666
Q ss_pred HHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecccccc
Q 042694 188 VIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~~~~ 250 (554)
.+. .++|++||+||.... .+.++..+++|+.|+.++.+.+.. + .+..++|++||...+....
T Consensus 71 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 149 (249)
T 2ew8_A 71 AFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE- 149 (249)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-
Confidence 654 379999999997542 346788999999998888877532 1 2467999999986654311
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
....|...+... ..+++.++.+.. ..|+++.+++||.|.++...
T Consensus 150 ---------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 150 ---------------------------AYTHYISTKAAN--------IGFTRALASDLG-KDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp ---------------------------SCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCC------
T ss_pred ---------------------------CchhHHHHHHHH--------HHHHHHHHHHHH-hcCcEEEEEecCcCcCccch
Confidence 111121111111 123334433332 24899999999999765322
Q ss_pred -CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 -PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 -p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... . . ..... ... . + ...+..++|+|++++.++.... ....++++++.++
T Consensus 194 ~~~~~---~--~-~~~~~----~~~--~---~--~~~~~~p~dva~~~~~l~s~~~--~~~tG~~~~vdGG 245 (249)
T 2ew8_A 194 ASALS---A--M-FDVLP----NML--Q---A--IPRLQVPLDLTGAAAFLASDDA--SFITGQTLAVDGG 245 (249)
T ss_dssp ----------------------CTT--S---S--SCSCCCTHHHHHHHHHHTSGGG--TTCCSCEEEESSS
T ss_pred hcccc---c--h-hhHHH----Hhh--C---c--cCCCCCHHHHHHHHHHHcCccc--CCCCCcEEEECCC
Confidence 1100 0 0 00000 000 0 1 1246788999999988875432 1234678888776
No 146
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.61 E-value=1.6e-14 Score=141.25 Aligned_cols=233 Identities=13% Similarity=0.070 Sum_probs=136.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--h-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--L-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||+++++.|++.|. +|+++++. . .+.+.+... .....++.++.+|++++ +
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~------~ 68 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDAAEIEKVRAGLA----AQHGVKVLYDGADLSKG------E 68 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCHHHHHHHHHHHH----HHHTSCEEEECCCTTSH------H
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCcchHHHHHHHHHH----hccCCcEEEEECCCCCH------H
Confidence 3578999999999999999999999886 45555432 1 222222211 00134688899999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+..
T Consensus 69 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 148 (260)
T 1x1t_A 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA 148 (260)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC
Confidence 6666654 79999999997542 3567889999999999999888531 24679999999865432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.. ..|+++.+++||.|.++
T Consensus 149 ~~----------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~ 191 (260)
T 1x1t_A 149 SA----------------------------NKSAYVAAKHGV--------VGFTKVTALETA-GQGITANAICPGWVRTP 191 (260)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHT-TTTEEEEEEEECCBCC-
T ss_pred CC----------------------------CCchHHHHHHHH--------HHHHHHHHHHhc-cCCEEEEEEeecCccCc
Confidence 11 011111111111 123333333322 34899999999999765
Q ss_pred ccCCc-cccccCCCC-ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPF-SGWMEGNRM-MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~-~g~~~~~~~-~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..... +........ ......... .... + ...+..++|++++++.++.... ....++++++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---p--~~~~~~p~dva~~~~~l~s~~~--~~~tG~~~~vdgG 256 (260)
T 1x1t_A 192 LVEKQISALAEKNGVDQETAARELL---SEKQ---P--SLQFVTPEQLGGTAVFLASDAA--AQITGTTVSVDGG 256 (260)
T ss_dssp -----------------------CH---HHHC---T--TCCCBCHHHHHHHHHHHHSGGG--TTCCSCEEEESTT
T ss_pred hHHHhhhhhccccCCchHHHHHHHh---hccC---C--CCCCcCHHHHHHHHHHHhChhh--cCCCCCEEEECCC
Confidence 43211 100000000 000000000 0000 1 1347789999999988875432 1234678988776
No 147
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.60 E-value=4.6e-15 Score=143.76 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=91.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||+|+||++++++|++.+... +|+++++. ..+.+.+. ...++.++.+|++++ +..
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~~~------~~~ 66 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSI--------KDSRVHVLPLTVTCD------KSL 66 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTC--------CCTTEEEEECCTTCH------HHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhc--------cCCceEEEEeecCCH------HHH
Confidence 46899999999999999999999977211 55655432 22222211 135789999999987 666
Q ss_pred HHHhc---------CccEEEEcCCCCC-c-------hhhHHHHHHHhchHHHHHHHHHHHc---C------C-----Cce
Q 042694 187 DVIAK---------EVDVIVNSAANTT-F-------DERYDIAIDINTRGPCRLMEFAKQC---N------K-----LKL 235 (554)
Q Consensus 187 ~~l~~---------~vdiViH~AA~v~-~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~------~-----~k~ 235 (554)
+.+.+ ++|+|||+||... . .+.++..+++|+.|+.++++++... . + ..+
T Consensus 67 ~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (250)
T 1yo6_A 67 DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAA 146 (250)
T ss_dssp HHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCE
T ss_pred HHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcE
Confidence 66665 8999999999765 1 3567889999999999999887643 1 2 579
Q ss_pred EEEEeeceecc
Q 042694 236 FVQVSTAYVNG 246 (554)
Q Consensus 236 ~v~vST~~v~~ 246 (554)
+|++||...+.
T Consensus 147 iv~isS~~~~~ 157 (250)
T 1yo6_A 147 VITISSGLGSI 157 (250)
T ss_dssp EEEECCGGGCS
T ss_pred EEEeccCcccc
Confidence 99999986644
No 148
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.60 E-value=4.6e-15 Score=146.60 Aligned_cols=231 Identities=13% Similarity=0.087 Sum_probs=138.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~~~------~~ 85 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEEGLRTTLKELRE-----AGVEADGRTCDVRSV------PE 85 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEECCCCCH------HH
Confidence 4688999999999999999999999876 45555432 12222222110 134688999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-----CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-----NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-----~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.....
T Consensus 86 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~ 165 (277)
T 2rhc_B 86 IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ 165 (277)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc
Confidence 666654 79999999997532 2467889999999999999988652 1357999999975532
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. +....|...+... ..+++.++.+.. ..|+++.++|||.|.+
T Consensus 166 ~~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t 208 (277)
T 2rhc_B 166 GV----------------------------VHAAPYSASKHGV--------VGFTKALGLELA-RTGITVNAVCPGFVET 208 (277)
T ss_dssp CC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHT-TTEEEEEEEEECSBCS
T ss_pred CC----------------------------CCCccHHHHHHHH--------HHHHHHHHHHHH-HhCcEEEEEecCcCcC
Confidence 21 1111111111111 123334433322 3489999999999976
Q ss_pred cccCCccc-cccCCCC-ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSG-WMEGNRM-MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g-~~~~~~~-~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+....... +.+.... .......... .. + ...++.++|+|++++.++..... ...++++++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------p--~~r~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdGG 273 (277)
T 2rhc_B 209 PMAASVREHYSDIWEVSTEEAFDRITA-RV------P--IGRYVQPSEVAEMVAYLIGPGAA--AVTAQALNVCGG 273 (277)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHH-HS------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhhhhhhcccccccchHHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCchhc--CCCCcEEEECCC
Confidence 43211000 0000000 0000000000 00 1 13578899999999988754321 224689998876
No 149
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.60 E-value=1.3e-14 Score=142.04 Aligned_cols=227 Identities=11% Similarity=0.105 Sum_probs=138.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|+++++ .......+... .....++.++.+|++++ ++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~------~~ 78 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAADAVEVTEKVG----KEFGVKTKAYQCDVSNT------DI 78 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTTHHHHHHHHH----HHHTCCEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCcchhhHHHHHHHH----HhcCCeeEEEEeeCCCH------HH
Confidence 4678999999999999999999999875 5565543 21111111110 01235788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... +...+||++||...+..
T Consensus 79 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 158 (265)
T 1h5q_A 79 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII 158 (265)
T ss_dssp HHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcc
Confidence 665554 49999999997542 2467788999999999999988642 22478999999866433
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
..+ .. .+ ..+. .. |..+|...+.+.+... ...|+++.++|||.|
T Consensus 159 ~~~--~~------~~-------------~~~~------~~------Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 205 (265)
T 1h5q_A 159 NQS--SL------NG-------------SLTQ------VF------YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV 205 (265)
T ss_dssp CEE--ET------TE-------------ECSC------HH------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred ccc--cc------cc-------------cccc------cc------cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 210 00 00 0011 11 2222333333333221 124899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++....... ....... ... + ...+++++|+|++++.++..... ...+++|++.++
T Consensus 206 ~t~~~~~~~~---------~~~~~~~-~~~------~--~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG 261 (265)
T 1h5q_A 206 NTDQTAHMDK---------KIRDHQA-SNI------P--LNRFAQPEEMTGQAILLLSDHAT--YMTGGEYFIDGG 261 (265)
T ss_dssp CCGGGGGSCH---------HHHHHHH-HTC------T--TSSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEECTT
T ss_pred ccccccccch---------hHHHHHH-hcC------c--ccCCCCHHHHHHHHHhhccCchh--cCcCcEEEecCC
Confidence 7754321100 0000000 000 0 12477899999999988765321 224689999877
No 150
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.60 E-value=1.9e-14 Score=140.77 Aligned_cols=234 Identities=12% Similarity=0.064 Sum_probs=136.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... .....++.++.+|++++ +.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------~~ 72 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA---RLLLFSRNREKLEAAASRIAS---LVSGAQVDIVAGDIREP------GD 72 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH---HSTTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh---cCCCCeEEEEEccCCCH------HH
Confidence 4678999999999999999999999876 45555432 12222222110 00012788999999987 77
Q ss_pred HHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||...+....
T Consensus 73 v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 152 (260)
T 2z1n_A 73 IDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ 152 (260)
T ss_dssp HHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC
Confidence 776665 59999999996532 3467889999999997777666421 2567999999986654311
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
.. ..|..+|.. -..+++.++.+... .|+++.++|||.|.++..
T Consensus 153 ----------------------------~~------~~Y~~sK~a--~~~~~~~la~e~~~-~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 153 ----------------------------DL------ALSNIMRLP--VIGVVRTLALELAP-HGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp ----------------------------TB------HHHHHHTHH--HHHHHHHHHHHHGG-GTEEEEEEEECHHHHCCC
T ss_pred ----------------------------CC------chhHHHHHH--HHHHHHHHHHHHhh-hCeEEEEEEECCcccchh
Confidence 00 112222110 01234444443332 489999999999977543
Q ss_pred CCcc-ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFS-GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~-g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... .............. ....... + ...+..++|+|++++.++..... ...++++++.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~---~~~~~~~---p--~~r~~~~~dva~~v~~l~s~~~~--~~tG~~i~vdGG 257 (260)
T 2z1n_A 196 RSLAEERARRSGITVEEAL---KSMASRI---P--MGRVGKPEELASVVAFLASEKAS--FITGAVIPVDGG 257 (260)
T ss_dssp C--------------------------CC---T--TSSCCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred hhhhhhhhcccCCcHHHHH---HHHHhcC---C--CCCccCHHHHHHHHHHHhCcccc--CCCCCEEEeCCC
Confidence 2000 00000000000000 0000000 1 12367899999999888754321 234678888775
No 151
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.60 E-value=2.5e-14 Score=144.25 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=113.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++||||||||+||++++++|++.|.+ |++.++ ...+.+.+.... .....++.++.+|++++ +.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~---Vv~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~------~~ 73 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCK---VAIADIRQDSIDKALATLEA---EGSGPEVMGVQLDVASR------EG 73 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHH---HTCGGGEEEEECCTTCH------HH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHh---cCCCCeEEEEECCCCCH------HH
Confidence 46889999999999999999999998864 454432 222333222211 00123789999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcC---------CCceEEEEeec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCN---------KLKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~---------~~k~~v~vST~ 242 (554)
++.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+...- +-.++|++||.
T Consensus 74 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~ 153 (319)
T 3ioy_A 74 FKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM 153 (319)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence 666654 67999999997532 35678899999999999999886531 23469999998
Q ss_pred eecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEE
Q 042694 243 YVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVI 318 (554)
Q Consensus 243 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I 318 (554)
..+.... .. . .|..+|. +++.++.+... .|+.+.+
T Consensus 154 a~~~~~~----------------------------~~------~------~Y~aSKaal~~~~~~la~e~~~-~gi~v~~ 192 (319)
T 3ioy_A 154 AAFLAAG----------------------------SP------G------IYNTTKFAVRGLSESLHYSLLK-YEIGVSV 192 (319)
T ss_dssp GGTCCCS----------------------------SS------H------HHHHHHHHHHHHHHHHHHHHGG-GTCEEEE
T ss_pred ccccCCC----------------------------CC------H------HHHHHHHHHHHHHHHHHHHhhh-cCCEEEE
Confidence 6644321 00 1 1223344 55666554443 4899999
Q ss_pred Eccceeeecc
Q 042694 319 IRPSVIESTC 328 (554)
Q Consensus 319 ~Rp~~V~g~~ 328 (554)
++||.|.++.
T Consensus 193 v~PG~v~T~~ 202 (319)
T 3ioy_A 193 LCPGLVKSYI 202 (319)
T ss_dssp ECCCCBC---
T ss_pred EEcCeEccCc
Confidence 9999996643
No 152
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.60 E-value=5.4e-14 Score=137.92 Aligned_cols=224 Identities=14% Similarity=0.125 Sum_probs=138.5
Q ss_pred ccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||||+ ||++++++|++.|. +|+++++ +..+.+.+.... ....++.++.+|++++ +
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~Dl~~~------~ 86 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA---DVVISDYHERRLGETRDQLAD----LGLGRVEAVVCDVTST------E 86 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHT----TCSSCEEEEECCTTCH------H
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC---EEEEecCCHHHHHHHHHHHHh----cCCCceEEEEeCCCCH------H
Confidence 57899999999996 99999999999876 4555543 222333332211 1235899999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceecc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~ 246 (554)
+.+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+... ++..++|++||...+.
T Consensus 87 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 166 (266)
T 3o38_A 87 AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR 166 (266)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC
Confidence 7666654 68999999997542 3467889999999999999988753 1446899999976543
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. +....|...+... ..+++.++.+.. ..|+.+..++||.|..
T Consensus 167 ~~----------------------------~~~~~Y~~sKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t 209 (266)
T 3o38_A 167 AQ----------------------------HSQSHYAAAKAGV--------MALTRCSAIEAV-EFGVRINAVSPSIARH 209 (266)
T ss_dssp CC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCCCC
T ss_pred CC----------------------------CCCchHHHHHHHH--------HHHHHHHHHHHH-HcCcEEEEEeCCcccc
Confidence 21 1111121111111 123334433332 2489999999999866
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+....... ...... + ........+..++|+|++++.++..... .-.++++++.++
T Consensus 210 ~~~~~~~~--------~~~~~~--------~-~~~~~~~r~~~~~dva~~i~~l~s~~~~--~~tG~~i~vdgG 264 (266)
T 3o38_A 210 KFLEKTSS--------SELLDR--------L-ASDEAFGRAAEPWEVAATIAFLASDYSS--YMTGEVVSVSSQ 264 (266)
T ss_dssp ----------------------------------CCTTSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESSC
T ss_pred hhhhccCc--------HHHHHH--------H-HhcCCcCCCCCHHHHHHHHHHHcCcccc--CccCCEEEEcCC
Confidence 43211100 000000 0 0111123567899999999888765332 234689998876
No 153
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.60 E-value=3.7e-14 Score=139.61 Aligned_cols=219 Identities=14% Similarity=0.118 Sum_probs=140.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++ ...+.+.+.. ..++..+.+|++++ ++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~------~~ 71 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGA---RVVLADLPETDLAGAAASV--------GRGAVHHVVDLTNE------VS 71 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSCHHHHHHHH--------CTTCEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHh--------CCCeEEEECCCCCH------HH
Confidence 5789999999999999999999999886 4555543 2223333222 34678899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+ ++ .+..++|++||...+
T Consensus 72 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~ 150 (271)
T 3tzq_B 72 VRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS-AGGGAIVNISSATAH 150 (271)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEECCHHHc
Confidence 777665 79999999997622 3467889999999999999998 33 356799999998664
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
.... ....|...+... ..+++.++.+... .|+++.+++||.|.
T Consensus 151 ~~~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~ 193 (271)
T 3tzq_B 151 AAYD----------------------------MSTAYACTKAAI--------ETLTRYVATQYGR-HGVRCNAIAPGLVR 193 (271)
T ss_dssp SBCS----------------------------SCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECCBC
T ss_pred CCCC----------------------------CChHHHHHHHHH--------HHHHHHHHHHHhh-cCEEEEEEEeCCCc
Confidence 3211 111122111111 1233444433322 48999999999998
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++.... .+ .......+.. ....-.+...+|+|++++.++..... --.++++++.++
T Consensus 194 t~~~~~--~~------~~~~~~~~~~---------~~~~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 249 (271)
T 3tzq_B 194 TPRLEV--GL------PQPIVDIFAT---------HHLAGRIGEPHEIAELVCFLASDRAA--FITGQVIAADSG 249 (271)
T ss_dssp CTTTC-----------CHHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred Cccccc--cC------CHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccC--CcCCCEEEECCC
Confidence 754320 00 0000000000 00112356789999999888765432 234689999877
No 154
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.60 E-value=3e-14 Score=140.55 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=140.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++ ...+.+.++... ...++.++.+|++++ ++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~------~~ 95 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA---QVAVAARHSDALQVVADEIAG-----VGGKALPIRCDVTQP------DQ 95 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSGGGGHHHHHHHHH-----TTCCCEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCH------HH
Confidence 5789999999999999999999999886 4554432 333333333211 234788999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+ -.++|++||......
T Consensus 96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~ 175 (276)
T 3r1i_A 96 VRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII 175 (276)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence 776665 79999999997643 3567888999999999999988642 12 267999999765332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
... +....|...+... ..+++.++.+... .|+++..++||.|..+
T Consensus 176 ~~~--------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gIrvn~v~PG~v~T~ 220 (276)
T 3r1i_A 176 NIP--------------------------QQVSHYCTSKAAV--------VHLTKAMAVELAP-HQIRVNSVSPGYIRTE 220 (276)
T ss_dssp CCS--------------------------SCCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECCBCST
T ss_pred CCC--------------------------CCcchHHHHHHHH--------HHHHHHHHHHHhh-cCcEEEEEeeCCCcCC
Confidence 100 0111122111111 1234444443332 4899999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+.+.. .... .. + ...+...+|+|++++.++..... --.++++++.++
T Consensus 221 ~~~~~~~~~~----------~~~~-~~------p--~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vdGG 272 (276)
T 3r1i_A 221 LVEPLADYHA----------LWEP-KI------P--LGRMGRPEELTGLYLYLASAASS--YMTGSDIVIDGG 272 (276)
T ss_dssp TTGGGGGGHH----------HHGG-GS------T--TSSCBCGGGSHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccccchHHHH----------HHHh-cC------C--CCCCcCHHHHHHHHHHHcCcccc--CccCcEEEECcC
Confidence 4322211110 0000 00 0 12356789999999888765332 234689998876
No 155
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.60 E-value=4.8e-14 Score=137.54 Aligned_cols=223 Identities=13% Similarity=0.058 Sum_probs=135.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++|+|+||||||+||++++++|++.|. +|+++++..- +.+.+.. .+ .++.+|++++ ++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~---------~~-~~~~~D~~~~------~~~ 64 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEGKEVAEAI---------GG-AFFQVDLEDE------RER 64 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTHHHHHHHH---------TC-EEEECCTTCH------HHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHh---------hC-CEEEeeCCCH------HHH
Confidence 4678999999999999999999999886 4555543211 2222211 13 6789999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||.......
T Consensus 65 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~- 143 (256)
T 2d1y_A 65 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE- 143 (256)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-
Confidence 66554 78999999997543 2467889999999999999988542 246799999997653321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+.. ..|+++.+++||.|..+..
T Consensus 144 ---------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~ 187 (256)
T 2d1y_A 144 ---------------------------QENAAYNASKGGL--------VNLTRSLALDLA-PLRIRVNAVAPGAIATEAV 187 (256)
T ss_dssp ---------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCHHH
T ss_pred ---------------------------CCChhHHHHHHHH--------HHHHHHHHHHHh-hcCeEEEEEeeCCccCchh
Confidence 0111111111111 023333333332 2489999999999865321
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .+............ .+ .+......+++++|+|++++.++..... ...++++++.++
T Consensus 188 ~---~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~dvA~~~~~l~s~~~~--~~~G~~~~v~gG 244 (256)
T 2d1y_A 188 L---EAIALSPDPERTRR--------DW-EDLHALRRLGKPEEVAEAVLFLASEKAS--FITGAILPVDGG 244 (256)
T ss_dssp H---HHHC--------CH--------HH-HTTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred h---hccccccCCHHHHH--------HH-HhcCCCCCCcCHHHHHHHHHHHhCchhc--CCCCCEEEECCC
Confidence 1 11000000000000 00 0111123578999999999988765321 224679999887
No 156
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.60 E-value=3.9e-14 Score=141.14 Aligned_cols=221 Identities=15% Similarity=0.101 Sum_probs=140.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+||||||+|+||++++++|++.|.+ |++.+.. ..+.+.+... ....++.++.+|++++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~d~------ 112 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAINYLPAEEEDAQQVKALIE-----ECGRKAVLLPGDLSDE------ 112 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCGGGHHHHHHHHHHHH-----HTTCCEEECCCCTTSH------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchhHHHHHHHHHH-----HcCCcEEEEEecCCCH------
Confidence 57899999999999999999999998864 4544322 1222222211 1235788999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccc
Q 042694 184 DLADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~ 247 (554)
++.+.+.+ ++|++||+||... + .+.++..+++|+.|+..+++.+... .+-.++|++||...+..
T Consensus 113 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~ 192 (294)
T 3r3s_A 113 SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP 192 (294)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC
Confidence 66665553 7999999999743 1 3567899999999999999999753 12248999999876543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+..+ ..+++.++.+... .|+++..++||.|.++
T Consensus 193 ~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 193 SP----------------------------HLLDYAATKAAI--------LNYSRGLAKQVAE-KGIRVNIVAPGPIWTA 235 (294)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCSH
T ss_pred CC----------------------------CchHHHHHHHHH--------HHHHHHHHHHHhh-cCeEEEEEecCcCccc
Confidence 21 111121111111 1234444444333 4899999999999875
Q ss_pred ccCC---ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEP---FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p---~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... .+..... +.. ..-...+...+|+|++++.++..... --.++++++.++
T Consensus 236 ~~~~~~~~~~~~~~----------~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 290 (294)
T 3r3s_A 236 LQISGGQTQDKIPQ----------FGQ---------QTPMKRAGQPAELAPVYVYLASQESS--YVTAEVHGVCGG 290 (294)
T ss_dssp HHHTTTSCGGGSTT----------TTT---------TSTTSSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccccCCCHHHHHH----------HHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 3110 0111100 000 00112356789999999888765332 234689999887
No 157
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.60 E-value=1.2e-14 Score=142.63 Aligned_cols=222 Identities=11% Similarity=0.002 Sum_probs=138.8
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEE-Ecch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
...+|+|+||||+|+||++++++|++.|.+ |++ .++. ..+...+... ....++.++.+|++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~Dl~~~------ 88 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDAAGAQETLNAIV-----ANGGNGRLLSFDVANR------ 88 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHH-----HTTCCEEEEECCTTCH------
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCchHHHHHHHHHHH-----hcCCceEEEEecCCCH------
Confidence 356889999999999999999999998864 433 3221 1122222111 1235788999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH----cCCCceEEEEeeceec
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ----CNKLKLFVQVSTAYVN 245 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~----~~~~k~~v~vST~~v~ 245 (554)
++.+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++.+.. ..+..++|++||....
T Consensus 89 ~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 168 (267)
T 4iiu_A 89 EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGV 168 (267)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHH
T ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhc
Confidence 66666654 79999999997542 356788999999999999998741 1356799999997654
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
.... ....|...+..+ ..+++.++.+... .|+++.+++||.|.
T Consensus 169 ~~~~----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~v~~v~PG~v~ 211 (267)
T 4iiu_A 169 MGNR----------------------------GQVNYSAAKAGI--------IGATKALAIELAK-RKITVNCIAPGLID 211 (267)
T ss_dssp HCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBC
T ss_pred cCCC----------------------------CCchhHHHHHHH--------HHHHHHHHHHHhh-cCeEEEEEEEeeec
Confidence 3211 111121111111 1245555554433 48999999999996
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+.....+.+.. . ... ......+..++|+|++++.++..... .-.++++++.++
T Consensus 212 t~~~~~~~~~~~------~--------~~~-----~~p~~~~~~~edva~~~~~L~s~~~~--~itG~~i~vdGG 265 (267)
T 4iiu_A 212 TGMIEMEESALK------E--------AMS-----MIPMKRMGQAEEVAGLASYLMSDIAG--YVTRQVISINGG 265 (267)
T ss_dssp STTCCCCHHHHH------H--------HHH-----TCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CCcccccHHHHH------H--------HHh-----cCCCCCCcCHHHHHHHHHHHhCCccc--CccCCEEEeCCC
Confidence 643321111110 0 000 00112467889999999888765331 234688988775
No 158
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.59 E-value=2.6e-14 Score=140.82 Aligned_cols=228 Identities=13% Similarity=0.107 Sum_probs=136.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 84 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEKELDECLEIWRE-----KGLNVEGSVCDLLSR------TE 84 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEECCCCCH------HH
Confidence 5689999999999999999999999886 45555432 12222222110 134788999999987 66
Q ss_pred HHHHh--------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIA--------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+. ..+|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+..
T Consensus 85 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 164 (273)
T 1ae1_A 85 RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA 164 (273)
T ss_dssp HHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC
Confidence 66665 579999999997532 3567888999999999999988421 24679999999876543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+.. ..|+++.+++||.|.++
T Consensus 165 ~~----------------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~ 207 (273)
T 1ae1_A 165 LP----------------------------SVSLYSASKGAI--------NQMTKSLACEWA-KDNIRVNSVAPGVILTP 207 (273)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBC--
T ss_pred CC----------------------------CcchhHHHHHHH--------HHHHHHHHHHHh-hcCcEEEEEEeCCCcCc
Confidence 11 111111111111 123334433332 24899999999999775
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..... ............ ...... + ...+..++|+|++++.++..... ...++++++.++
T Consensus 208 ~~~~~---~~~~~~~~~~~~----~~~~~~---p--~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG 266 (273)
T 1ae1_A 208 LVETA---IKKNPHQKEEID----NFIVKT---P--MGRAGKPQEVSALIAFLCFPAAS--YITGQIIWADGG 266 (273)
T ss_dssp --------------CHHHHH----HHHHHS---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhh---hhcccCcHHHHH----HHHhcC---C--CCCCcCHHHHHHHHHHHhCcccc--CcCCCEEEECCC
Confidence 43211 000000000000 000000 1 12367889999999887754321 224688998876
No 159
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.59 E-value=3.2e-14 Score=141.51 Aligned_cols=228 Identities=14% Similarity=0.097 Sum_probs=137.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+||||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 97 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA---TIVFNDINQELVDRGMAAYKA-----AGINAHGYVCDVTDE------DG 97 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH-----TTCCCEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEecCCCH------HH
Confidence 5789999999999999999999999876 45555432 12222222110 124678899999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+++ .+|+|||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 98 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~ 177 (291)
T 3cxt_A 98 IQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR 177 (291)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC
T ss_pred HHHHHHHHHHHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECccccccCC
Confidence 666654 59999999997542 3467889999999999998887531 256799999997543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+... ..+++.++.+.. ..|+++.+++||.|.++.
T Consensus 178 ----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~ 220 (291)
T 3cxt_A 178 ----------------------------ETVSAYAAAKGGL--------KMLTKNIASEYG-EANIQCNGIGPGYIATPQ 220 (291)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCTT
T ss_pred ----------------------------CCChHHHHHHHHH--------HHHHHHHHHHHh-hcCeEEEEEEECCCcCcc
Confidence 0111111111111 123344443332 248999999999997643
Q ss_pred cCCccccccCCCCccceeee--eccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILY--YGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~--~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...... . ...... +........ + ...+..++|+|++++.++..... ...++++++.++
T Consensus 221 ~~~~~~---~----~~~~~~~~~~~~~~~~~---p--~~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG 280 (291)
T 3cxt_A 221 TAPLRE---L----QKDGSRHPFDQFIIAKT---P--AARWGEAEDLMGPAVFLASDASN--FVNGHILYVDGG 280 (291)
T ss_dssp C-------------------CHHHHHHHHHC---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhcc---c----hhhhhhhhHHhhhhccC---C--CCCCCCHHHHHHHHHHHhCcccc--CCcCCeEEECCC
Confidence 321100 0 000000 000000000 1 12377899999999888754321 224678888776
No 160
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.59 E-value=2.7e-14 Score=140.92 Aligned_cols=226 Identities=14% Similarity=0.071 Sum_probs=135.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-h--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-E--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||+|+||+++++.|++.|. +|+++++ . ..+.+.+... .....++.++.+|++++.- ..+
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~--~~~ 79 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEGAAQRLVAELN----AARAGSAVLCKGDLSLSSS--LLD 79 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHH----HHSTTCEEEEECCCSSSTT--HHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChHHHHHHHHHHH----HhcCCceEEEeccCCCccc--cHH
Confidence 4678999999999999999999999886 4555543 2 2222222211 0013478899999987510 003
Q ss_pred HHHHHhc-------CccEEEEcCCCCCch------------------hhHHHHHHHhchHHHHHHHHHHHc--CCC----
Q 042694 185 LADVIAK-------EVDVIVNSAANTTFD------------------ERYDIAIDINTRGPCRLMEFAKQC--NKL---- 233 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~~------------------~~~~~~~~~Nv~gt~~ll~la~~~--~~~---- 233 (554)
..+.+.+ .+|++||+||..... +.++..+++|+.|+..+++.+... .+.
T Consensus 80 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 159 (276)
T 1mxh_A 80 CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRS 159 (276)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------C
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCC
Confidence 3343333 799999999975321 667889999999999999999763 123
Q ss_pred --ceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc
Q 042694 234 --KLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER 311 (554)
Q Consensus 234 --k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~ 311 (554)
.++|++||...+... +....|...+... ..+++.++.+.. .
T Consensus 160 ~~g~iv~isS~~~~~~~----------------------------~~~~~Y~asK~a~--------~~l~~~la~e~~-~ 202 (276)
T 1mxh_A 160 RNLSVVNLCDAMTDLPL----------------------------PGFCVYTMAKHAL--------GGLTRAAALELA-P 202 (276)
T ss_dssp CCEEEEEECCGGGGSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-G
T ss_pred CCcEEEEECchhhcCCC----------------------------CCCeehHHHHHHH--------HHHHHHHHHHHh-h
Confidence 689999998664321 1111121111111 123334433332 2
Q ss_pred CCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCC
Q 042694 312 GDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPD 391 (554)
Q Consensus 312 ~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~ 391 (554)
.|+.+.+++||.|.++ . ..+. ........ .. + ...++..++|+|++++.++..... ...
T Consensus 203 ~gi~v~~v~PG~v~t~-~-~~~~---------~~~~~~~~-~~------p-~~r~~~~~~dva~~v~~l~s~~~~--~~t 261 (276)
T 1mxh_A 203 RHIRVNAVAPGLSLLP-P-AMPQ---------ETQEEYRR-KV------P-LGQSEASAAQIADAIAFLVSKDAG--YIT 261 (276)
T ss_dssp GTEEEEEEEESSBSCC-S-SSCH---------HHHHHHHT-TC------T-TTSCCBCHHHHHHHHHHHHSGGGT--TCC
T ss_pred cCeEEEEEecCcccCC-c-cCCH---------HHHHHHHh-cC------C-CCCCCCCHHHHHHHHHHHhCcccc--Ccc
Confidence 4899999999999775 2 1110 00000000 00 1 112277899999999888754321 224
Q ss_pred CeEEEeeCC
Q 042694 392 INVYQIASS 400 (554)
Q Consensus 392 ~~vyn~~~~ 400 (554)
++++++.++
T Consensus 262 G~~~~vdgG 270 (276)
T 1mxh_A 262 GTTLKVDGG 270 (276)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCc
Confidence 678998776
No 161
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.59 E-value=1.8e-14 Score=141.05 Aligned_cols=223 Identities=13% Similarity=0.085 Sum_probs=136.4
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||+ |+||++++++|++.|. +|+++++.. .+.+.+... ...++.++.+|++++
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~l~~------~~~~~~~~~~D~~~~------ 70 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAERLRPEAEKLAE------ALGGALLFRADVTQD------ 70 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTC---EEEEEESCGGGHHHHHHHHH------HTTCCEEEECCTTCH------
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHH------hcCCcEEEECCCCCH------
Confidence 467899999999 9999999999999886 455553321 111211110 012367899999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
++.+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+-.++|++||...
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 150 (261)
T 2wyu_A 71 EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS 150 (261)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 66666654 78999999997542 3467889999999999999999752 11248999999755
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+... ..+++.++.+.. ..|+++.+++||.|
T Consensus 151 ~~~~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v 193 (261)
T 2wyu_A 151 EKVV----------------------------PKYNVMAIAKAAL--------EASVRYLAYELG-PKGVRVNAISAGPV 193 (261)
T ss_dssp TSBC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECCC
T ss_pred cCCC----------------------------CCchHHHHHHHHH--------HHHHHHHHHHHh-hhCcEEEEEeeCCC
Confidence 3321 1111111111111 123334433332 24899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++.....+.. ......+... . + ...+..++|+|++++.++..... ...++++++.++
T Consensus 194 ~t~~~~~~~~~-------~~~~~~~~~~-~------p--~~~~~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG 251 (261)
T 2wyu_A 194 RTVAARSIPGF-------TKMYDRVAQT-A------P--LRRNITQEEVGNLGLFLLSPLAS--GITGEVVYVDAG 251 (261)
T ss_dssp CCTGGGGCTTH-------HHHHHHHHHH-S------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cCchhhhcccc-------HHHHHHHHhc-C------C--CCCCCCHHHHHHHHHHHcChhhc--CCCCCEEEECCC
Confidence 87543211110 0000000000 0 0 12356789999999888754321 224689999887
No 162
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.59 E-value=2.2e-14 Score=141.03 Aligned_cols=220 Identities=13% Similarity=0.079 Sum_probs=139.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|.+ |++... ...+.+.+.... ...++.++.+|++++ +
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~d~------~ 91 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK---VAVNYASSAGAADEVVAAIAA-----AGGEAFAVKADVSQE------S 91 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------H
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCChHHHHHHHHHHHh-----cCCcEEEEECCCCCH------H
Confidence 57899999999999999999999998864 444332 222223222211 235788999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++++... .+..++|++||......
T Consensus 92 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (269)
T 4dmm_A 92 EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG 171 (269)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC
Confidence 7666654 79999999997642 3567889999999999999987431 24568999999765332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+..+ ..+++.++.+... .|+++..++||.|..+
T Consensus 172 ~~----------------------------~~~~Y~asK~a~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~T~ 214 (269)
T 4dmm_A 172 NP----------------------------GQANYSAAKAGV--------IGLTKTVAKELAS-RGITVNAVAPGFIATD 214 (269)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECCBTTS
T ss_pred CC----------------------------CchhHHHHHHHH--------HHHHHHHHHHHhh-hCcEEEEEEECCCcCc
Confidence 11 111111111111 1244445444333 4899999999999654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... ... .. ..... -...+..++|+|++++.++..+.. .--.++++++.++
T Consensus 215 ~~~~---~~~-----~~--------~~~~~-----p~~r~~~~~dvA~~v~~l~s~~~~-~~itG~~i~vdGG 265 (269)
T 4dmm_A 215 MTSE---LAA-----EK--------LLEVI-----PLGRYGEAAEVAGVVRFLAADPAA-AYITGQVINIDGG 265 (269)
T ss_dssp CSCH---HHH-----HH--------HGGGC-----TTSSCBCHHHHHHHHHHHHHCGGG-GGCCSCEEEESTT
T ss_pred cccc---ccH-----HH--------HHhcC-----CCCCCCCHHHHHHHHHHHhCCccc-CCCcCCEEEECCC
Confidence 3211 100 00 00000 012466789999999888765221 1123689999877
No 163
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.59 E-value=1.3e-14 Score=141.84 Aligned_cols=223 Identities=15% Similarity=0.095 Sum_probs=138.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++|+|+||||+|+||++++++|++.|.+ |++. ++ ...+.+.+.... ...++.++.+|++++ ++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~---vv~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 68 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN---IVINYARSKKAALETAEEIEK-----LGVKVLVVKANVGQP------AK 68 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHT-----TTCCEEEEECCTTCH------HH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE---EEEEcCCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HH
Confidence 5789999999999999999999998864 4443 32 222223222211 235789999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 148 (258)
T 3oid_A 69 IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL 148 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC
Confidence 666654 67999999986432 3467889999999999999988532 245699999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+... ..+++.++.+.. ..|+.+..++||.|..+.
T Consensus 149 ----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 149 ----------------------------ENYTTVGVSKAAL--------EALTRYLAVELS-PKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTG-GGTEEEEEEEECCBCSGG
T ss_pred ----------------------------CCcHHHHHHHHHH--------HHHHHHHHHHHh-hcCcEEEEEeeCCCcChh
Confidence 1111122111111 123444444333 248999999999996643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....+.. ......... .. + ...+..++|+|++++.++..... --.++++++.++
T Consensus 192 ~~~~~~~-------~~~~~~~~~-~~------p--~~r~~~~~dva~~v~~L~s~~~~--~itG~~i~vdGG 245 (258)
T 3oid_A 192 LKHFPNR-------EDLLEDARQ-NT------P--AGRMVEIKDMVDTVEFLVSSKAD--MIRGQTIIVDGG 245 (258)
T ss_dssp GGGCTTH-------HHHHHHHHH-HC------T--TSSCBCHHHHHHHHHHHTSSTTT--TCCSCEEEESTT
T ss_pred hhhcccC-------HHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccC--CccCCEEEECCC
Confidence 2211110 000000000 00 0 13467889999999887754321 234689999887
No 164
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.59 E-value=2.3e-14 Score=141.13 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=140.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++|+|+||||+|+||++++++|++.|.+ |+++++ +..+.+.+.... ...++..+.+|++++ ++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~~v 94 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH---VLAWGRTDGVKEVADEIAD-----GGGSAEAVVADLADL------EGA 94 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTHHHHHHHHHHT-----TTCEEEEEECCTTCH------HHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HHH
Confidence 57899999999999999999999998864 454443 222233222211 235788999999987 665
Q ss_pred HHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 187 DVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 187 ~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+....
T Consensus 95 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~- 173 (273)
T 3uf0_A 95 ANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR- 173 (273)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS-
T ss_pred HHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC-
Confidence 55543 79999999997643 3467889999999999999987431 2457899999976543211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
....|...+... ..+++.++.+... .|+++..++||.|.++...
T Consensus 174 ---------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~T~~~~ 217 (273)
T 3uf0_A 174 ---------------------------NVAAYAASKHAV--------VGLTRALASEWAG-RGVGVNALAPGYVVTANTA 217 (273)
T ss_dssp ---------------------------SCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCSGGGH
T ss_pred ---------------------------CChhHHHHHHHH--------HHHHHHHHHHHhh-cCcEEEEEEeCCCcCCchh
Confidence 111122111111 1234444443332 4899999999999764331
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. +... ......... .. + ...+..++|+|++++.++..... --.++++++.++
T Consensus 218 ~---~~~~----~~~~~~~~~-~~------p--~~r~~~pedva~~v~~L~s~~a~--~itG~~i~vdGG 269 (273)
T 3uf0_A 218 A---LRAD----DERAAEITA-RI------P--AGRWATPEDMVGPAVFLASDAAS--YVHGQVLAVDGG 269 (273)
T ss_dssp H---HHTS----HHHHHHHHH-HS------T--TSSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred h---cccC----HHHHHHHHh-cC------C--CCCCCCHHHHHHHHHHHhCchhc--CCcCCEEEECcC
Confidence 1 1000 000000000 00 0 12467789999999888765332 234689999877
No 165
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.59 E-value=5e-14 Score=138.58 Aligned_cols=222 Identities=13% Similarity=0.112 Sum_probs=139.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|. +|++.+. ...+.+.+... ....++.++.+|++++ +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~Dv~d~------~ 94 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA---AVALTYVNAAERAQAVVSEIE-----QAGGRAVAIRADNRDA------E 94 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHH-----HTTCCEEEEECCTTCH------H
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHHHHHHHHHHHH-----hcCCcEEEEECCCCCH------H
Confidence 5789999999999999999999999886 4554422 22222222221 1245788999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||.......
T Consensus 95 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~- 173 (271)
T 3v2g_A 95 AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP- 173 (271)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-
Confidence 7666655 79999999997542 3467899999999999999998753 345689999985332110
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
.+....|...+..+ ..+++.++.+... .|+++..++||.|..+..
T Consensus 174 --------------------------~~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gIrvn~v~PG~v~T~~~ 218 (271)
T 3v2g_A 174 --------------------------WPGISLYSASKAAL--------AGLTKGLARDLGP-RGITVNIVHPGSTDTDMN 218 (271)
T ss_dssp --------------------------STTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCSSSS
T ss_pred --------------------------CCCchHHHHHHHHH--------HHHHHHHHHHhhh-hCeEEEEEecCCCcCCcc
Confidence 01111122112111 1234444443333 489999999999976543
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+.+.. .. .. .. + ...+...+|+|++++.++..... --.++++++.++
T Consensus 219 ~~~~~~~~------~~----~~-~~------~--~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vdGG 268 (271)
T 3v2g_A 219 PADGDHAE------AQ----RE-RI------A--TGSYGEPQDIAGLVAWLAGPQGK--FVTGASLTIDGG 268 (271)
T ss_dssp CSSCSSHH------HH----HH-TC------T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccchhHH------HH----Hh-cC------C--CCCCCCHHHHHHHHHHHhCcccC--CccCCEEEeCcC
Confidence 21111100 00 00 00 0 12356789999999887754331 234688888776
No 166
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.59 E-value=2.1e-14 Score=140.84 Aligned_cols=219 Identities=13% Similarity=0.084 Sum_probs=134.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+. ...++.++.+|++++ ++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~d~------~~ 87 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA---IVGLHGTREDKLKEIAAD--------LGKDVFVFSANLSDR------KS 87 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCSSEEEEECCTTSH------HH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH--------hCCceEEEEeecCCH------HH
Confidence 5789999999999999999999999886 45555432 22222222 235789999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||.......
T Consensus 88 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 167 (266)
T 3grp_A 88 IKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN 167 (266)
T ss_dssp HHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC
Confidence 766664 79999999997542 3567889999999977776665321 355799999997653321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. .. ..|..+|... ..+++.++.+... .|+++..++||.|..+.
T Consensus 168 ~----------------------------~~------~~Y~asKaa~--~~~~~~la~e~~~-~gI~vn~v~PG~v~t~~ 210 (266)
T 3grp_A 168 P----------------------------GQ------TNYCAAKAGL--IGFSKALAQEIAS-RNITVNCIAPGFIKSAM 210 (266)
T ss_dssp -----------------------------CH------HHHHHHHHHH--HHHHHHHHHHHGG-GTEEEEEEEECSBCSHH
T ss_pred C----------------------------Cc------hhHHHHHHHH--HHHHHHHHHHhhh-hCcEEEEEeeCcCCCch
Confidence 1 00 1122221000 1244455444433 48999999999997643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...... ........ ..-...+..++|+|++++.++..... --.++++++.++
T Consensus 211 ~~~~~~---------~~~~~~~~---------~~p~~r~~~~edvA~~v~~L~s~~~~--~itG~~i~vdGG 262 (266)
T 3grp_A 211 TDKLNE---------KQKEAIMA---------MIPMKRMGIGEEIAFATVYLASDEAA--YLTGQTLHINGG 262 (266)
T ss_dssp HHTCCH---------HHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhccCH---------HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CccCCEEEECCC
Confidence 211110 00000000 01113456789999999888765332 234689998876
No 167
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.59 E-value=3.8e-14 Score=139.50 Aligned_cols=222 Identities=15% Similarity=0.077 Sum_probs=137.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|. +|+++.+ ...+.+.+... ....++.++.+|++++ +
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~ 92 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL---KVWINYRSNAEVADALKNELE-----EKGYKAAVIKFDAASE------S 92 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHH-----HTTCCEEEEECCTTCH------H
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHHHHHHHHHHHH-----hcCCceEEEECCCCCH------H
Confidence 5789999999999999999999999886 4555433 12222222221 1235789999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||......
T Consensus 93 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (271)
T 4iin_A 93 DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG 172 (271)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC
Confidence 6666654 79999999997643 2567899999999999988887542 24578999999765332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+.... .+++.++.+.. ..|+.+..++||.|..+
T Consensus 173 ~----------------------------~~~~~Y~asK~a~~--------~~~~~la~e~~-~~gi~v~~v~PG~v~T~ 215 (271)
T 4iin_A 173 N----------------------------MGQTNYSASKGGMI--------AMSKSFAYEGA-LRNIRFNSVTPGFIETD 215 (271)
T ss_dssp C----------------------------TTCHHHHHHHHHHH--------HHHHHHHHHHH-TTTEEEEEEEECSBCCC
T ss_pred C----------------------------CCchHhHHHHHHHH--------HHHHHHHHHHH-HhCcEEEEEEeCcccCC
Confidence 1 11111211111110 12333333322 35899999999998654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+... ...... ......+..++++|++++.++..... .-.++++++.++
T Consensus 216 ~~~~~~~~~---------~~~~~~---------~~~~~~~~~p~dvA~~i~~l~s~~~~--~itG~~i~vdGG 268 (271)
T 4iin_A 216 MNANLKDEL---------KADYVK---------NIPLNRLGSAKEVAEAVAFLLSDHSS--YITGETLKVNGG 268 (271)
T ss_dssp ---------------------CGG---------GCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhhcHHH---------HHHHHh---------cCCcCCCcCHHHHHHHHHHHhCCCcC--CCcCCEEEeCCC
Confidence 332111100 000000 01113477899999999888765432 234689998876
No 168
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.59 E-value=5.5e-14 Score=137.83 Aligned_cols=128 Identities=15% Similarity=0.079 Sum_probs=92.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++++|+||||||+||++++++|++.+....+|+++++. ..+.+.+... ...++.++.+|++++ +
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~------~~~~~~~~~~Dl~~~------~ 85 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK------NHSNIHILEIDLRNF------D 85 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH------HCTTEEEEECCTTCG------G
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhc------cCCceEEEEecCCCh------H
Confidence 3678999999999999999999999987321256665432 1222222110 134789999999987 6
Q ss_pred HHHHHhc---------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHcC---------C-----C
Q 042694 185 LADVIAK---------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQCN---------K-----L 233 (554)
Q Consensus 185 ~~~~l~~---------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~~---------~-----~ 233 (554)
..+.+.+ ++|+|||+||... + .+.++..+++|+.|+.++++++...- + .
T Consensus 86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
T 1sny_A 86 AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGR 165 (267)
T ss_dssp GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTT
T ss_pred HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCC
Confidence 6666655 7999999999765 1 35678899999999999999886530 1 4
Q ss_pred ceEEEEeeceecc
Q 042694 234 KLFVQVSTAYVNG 246 (554)
Q Consensus 234 k~~v~vST~~v~~ 246 (554)
.++|++||...+.
T Consensus 166 ~~iv~isS~~~~~ 178 (267)
T 1sny_A 166 AAIINMSSILGSI 178 (267)
T ss_dssp CEEEEECCGGGCS
T ss_pred ceEEEEecccccc
Confidence 6899999986654
No 169
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.58 E-value=1.6e-14 Score=145.98 Aligned_cols=239 Identities=13% Similarity=0.115 Sum_probs=148.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc------------hhHHHHHHHcCCchhhhccCcEEEEEccCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA------------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVC 175 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~------------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~ 175 (554)
+++|+||||||+|+||+++++.|++.|. +|++++. ...+.+.+.... ...++.++.+|++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~ 96 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGSAAQSVVDEITA-----AGGEAVADGSNVA 96 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-----TTCEEEEECCCTT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCcccccccccccHHHHHHHHHHHHh-----cCCcEEEEECCCC
Confidence 6789999999999999999999999886 5555532 222233222211 2357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CC--------
Q 042694 176 ENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NK-------- 232 (554)
Q Consensus 176 ~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~-------- 232 (554)
++ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++++... ..
T Consensus 97 d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~ 170 (322)
T 3qlj_A 97 DW------DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAV 170 (322)
T ss_dssp SH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCC
Confidence 88 77666654 79999999997642 3467889999999999999988542 10
Q ss_pred CceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcC
Q 042694 233 LKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERG 312 (554)
Q Consensus 233 ~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~ 312 (554)
-.++|++||........ ....|...+..+ ..+++.++.+... .
T Consensus 171 ~g~IV~isS~~~~~~~~----------------------------~~~~Y~asKaal--------~~l~~~la~e~~~-~ 213 (322)
T 3qlj_A 171 DGRIINTSSGAGLQGSV----------------------------GQGNYSAAKAGI--------ATLTLVGAAEMGR-Y 213 (322)
T ss_dssp CEEEEEECCHHHHHCBT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-G
T ss_pred CcEEEEEcCHHHccCCC----------------------------CCccHHHHHHHH--------HHHHHHHHHHhcc-c
Confidence 14899999976543211 111121111111 1234444433322 4
Q ss_pred CCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCC
Q 042694 313 DIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDI 392 (554)
Q Consensus 313 glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~ 392 (554)
|+.+..++|| +..+... .+... .. ..+.....++.++|++++++.++..... .-.+
T Consensus 214 gI~vn~v~PG-~~t~~~~---~~~~~------~~------------~~~~~~~~~~~pedva~~v~~L~s~~~~--~itG 269 (322)
T 3qlj_A 214 GVTVNAIAPS-ARTRMTE---TVFAE------MM------------ATQDQDFDAMAPENVSPLVVWLGSAEAR--DVTG 269 (322)
T ss_dssp TEEEEEEEEC-TTSCCSC---CSCCC--------------------------CCTTCGGGTHHHHHHHTSGGGG--GCCS
T ss_pred CcEEEEecCC-CCCccch---hhhhh------hh------------hccccccCCCCHHHHHHHHHHHhCcccc--CCCC
Confidence 8999999999 5322111 11100 00 0111223566789999999888754332 1235
Q ss_pred eEEEeeCCCC---------------CcccHHHHHHHHHhHhccC
Q 042694 393 NVYQIASSVV---------------NPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 393 ~vyn~~~~~~---------------~~it~~e~~~~~~~~~~~~ 421 (554)
.++++.++.. ..++..|+.+.+.+.++..
T Consensus 270 ~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 270 KVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp CEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred CEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 7888877621 1236689999888888754
No 170
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.58 E-value=3.7e-14 Score=137.67 Aligned_cols=219 Identities=14% Similarity=0.068 Sum_probs=139.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|. +|++.++. ..+.+.+.. ..+...+.+|++++ ++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~d~------~~ 69 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA---KVIGTATSESGAQAISDYL--------GDNGKGMALNVTNP------ES 69 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHH--------GGGEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------cccceEEEEeCCCH------HH
Confidence 4689999999999999999999999886 45555432 222222222 23567899999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 149 (248)
T 3op4_A 70 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 149 (248)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC
Confidence 776665 79999999997542 3577889999999999999988541 245689999997553321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+... ..+++.++.+... .|+++..++||.|..+.
T Consensus 150 ----------------------------~~~~~Y~asK~a~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 150 ----------------------------AGQANYAAAKAGV--------IGFTKSMAREVAS-RGVTVNTVAPGFIETDM 192 (248)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBSSTT
T ss_pred ----------------------------CCChHHHHHHHHH--------HHHHHHHHHHHHH-hCeEEEEEeeCCCCCch
Confidence 1111121111111 1244555544433 48999999999986543
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....+. ........ ......+..++|++++++.++..... .-.++++++.++
T Consensus 193 ~~~~~~---------~~~~~~~~---------~~p~~r~~~p~dva~~v~~L~s~~~~--~itG~~i~vdgG 244 (248)
T 3op4_A 193 TKALND---------EQRTATLA---------QVPAGRLGDPREIASAVAFLASPEAA--YITGETLHVNGG 244 (248)
T ss_dssp TTTSCH---------HHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhcCH---------HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCCccC--CccCcEEEECCC
Confidence 221110 00000000 00113467899999999887754332 234689998876
No 171
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.58 E-value=1.8e-14 Score=141.88 Aligned_cols=125 Identities=14% Similarity=0.117 Sum_probs=90.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ +.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~ 94 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKHGLEETAAKCKG-----LGAKVHTFVVDCSNR------ED 94 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEEcCHHHHHHHHHHHHh-----cCCeEEEEEeeCCCH------HH
Confidence 5689999999999999999999999876 45555432 22222222111 134788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+.
T Consensus 95 v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 172 (272)
T 1yb1_A 95 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172 (272)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred HHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC
Confidence 666554 79999999997543 2457789999999988887776431 3567999999987654
No 172
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.58 E-value=3.6e-14 Score=141.83 Aligned_cols=217 Identities=15% Similarity=0.067 Sum_probs=129.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|++.++. ..+.+.+.... ...++.++.+|++++ +.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 94 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA---RLVLSDVDQPALEQAVNGLRG-----QGFDAHGVVCDVRHL------DE 94 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCceEEEEccCCCH------HH
Confidence 5789999999999999999999999886 45555432 22222222211 235788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... +...++|++||...+..
T Consensus 95 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 174 (301)
T 3tjr_A 95 MVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP 174 (301)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence 666654 79999999997532 3467889999999999999987541 12468999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+..+ ..+++.++.+.. ..|+.+.+++||.|..+
T Consensus 175 ~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 175 N----------------------------AGLGTYGVAKYGV--------VGLAETLAREVK-PNGIGVSVLCPMVVETK 217 (301)
T ss_dssp C----------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEECCSCCCSS
T ss_pred C----------------------------CCchHHHHHHHHH--------HHHHHHHHHHhc-ccCcEEEEEECCccccc
Confidence 1 1111121111111 123444444333 34899999999998653
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHH
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQ 383 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~ 383 (554)
........... ... ......+.. +......+++++++||++++.++..
T Consensus 218 ~~~~~~~~~~~--~~~--~~~~~~~~~----~~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 218 LVSNSERIRGA--DYG--MSATPEGAF----GPLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp HHHHHHHHC------------------------------CCCHHHHHHHHHHHHHH
T ss_pred cccccccccch--hhc--cccChhhhc----cccccccCCCCHHHHHHHHHHHHhc
Confidence 21100000000 000 000000000 1112234689999999999998876
No 173
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.58 E-value=1.9e-14 Score=143.51 Aligned_cols=241 Identities=15% Similarity=0.109 Sum_probs=140.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+..... .....++.++.+|++++ ++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~------~~ 92 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEA------SG 92 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCH------HH
Confidence 5689999999999999999999999886 45555432 222222221100 00012788999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+ .++|++||...+.
T Consensus 93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~ 171 (297)
T 1xhl_A 93 QDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP 171 (297)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc
Confidence 666654 7999999999643 2 2467889999999999999988652 23 6999999976543
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
... +....|...+... ..+++.++.+.. ..|+++.++|||.|.+
T Consensus 172 ~~~---------------------------~~~~~Y~asKaa~--------~~l~~~la~el~-~~gI~v~~v~PG~v~T 215 (297)
T 1xhl_A 172 QAH---------------------------SGYPYYACAKAAL--------DQYTRCTAIDLI-QHGVRVNSVSPGAVAT 215 (297)
T ss_dssp SCC---------------------------TTSHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECCBCS
T ss_pred CCC---------------------------CCcchHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEeeCCCcC
Confidence 210 0011111111111 123334433332 3489999999999976
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh-cccCCCCCeEEEeeCCCCCcc
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH-GMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~-~~~~~~~~~vyn~~~~~~~~i 405 (554)
+........................ .. + ...+...+|+|++++.++... .. ...++++++.++ ..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~------p--~~r~~~pedvA~~v~~l~s~~~~~--~itG~~i~vdGG--~~~ 282 (297)
T 1xhl_A 216 GFMGAMGLPETASDKLYSFIGSRKE-CI------P--VGHCGKPEEIANIIVFLADRNLSS--YIIGQSIVADGG--STL 282 (297)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHCTT-TC------T--TSSCBCHHHHHHHHHHHHCHHHHT--TCCSCEEEESTT--GGG
T ss_pred ccccccccccccccchHHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCCcccC--CccCcEEEECCC--ccc
Confidence 4321100000000000000000000 00 1 124678999999999887653 21 223689999887 444
Q ss_pred cHHH
Q 042694 406 VFQD 409 (554)
Q Consensus 406 t~~e 409 (554)
.+.+
T Consensus 283 ~~~~ 286 (297)
T 1xhl_A 283 VMGM 286 (297)
T ss_dssp CCGG
T ss_pred cccc
Confidence 4444
No 174
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.58 E-value=4.2e-14 Score=140.71 Aligned_cols=223 Identities=13% Similarity=0.061 Sum_probs=139.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++ ...+.+.+..... ...++.++.+|++++ ++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~------~~ 105 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA---NVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDP------GS 105 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCH------HH
Confidence 5789999999999999999999999886 4555432 3333443333220 125789999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH----HcCCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK----QCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+. + .+..++|++||......
T Consensus 106 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iV~isS~~~~~~ 184 (293)
T 3rih_A 106 CADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGRGRVILTSSITGPVT 184 (293)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH-HSSCEEEEECCSBTTTB
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCEEEEEeChhhccC
Confidence 666554 68999999997542 35678999999999999999884 3 35679999999754211
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. .+....|...+... ..+++.++.+... .|+++..++||.|.++
T Consensus 185 ~---------------------------~~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~t~ 228 (293)
T 3rih_A 185 G---------------------------YPGWSHYGASKAAQ--------LGFMRTAAIELAP-RGVTVNAILPGNILTE 228 (293)
T ss_dssp B---------------------------CTTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCCH
T ss_pred C---------------------------CCCCHHHHHHHHHH--------HHHHHHHHHHHhh-hCeEEEEEecCCCcCc
Confidence 0 01111121111111 1234444443333 4899999999999875
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...... ..... ...... + .--+...+|++++++.++..... --.++++++.++
T Consensus 229 ~~~~~~---------~~~~~----~~~~~~---p--~~r~~~p~dvA~~v~fL~s~~a~--~itG~~i~vdGG 281 (293)
T 3rih_A 229 GLVDMG---------EEYIS----GMARSI---P--MGMLGSPVDIGHLAAFLATDEAG--YITGQAIVVDGG 281 (293)
T ss_dssp HHHHTC---------HHHHH----HHHTTS---T--TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhcc---------HHHHH----HHHhcC---C--CCCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 321100 00000 000000 0 12245679999999888755332 234689999887
No 175
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.58 E-value=4.3e-14 Score=139.71 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=142.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 71 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA---KVVVTARNGNALAELTDEIAG-----GGGEAAALAGDVGDE------AL 71 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECCSCHHHHHHHHHHHTT-----TTCCEEECCCCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH------HH
Confidence 5689999999999999999999999886 56665532 23333333221 245788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...+..
T Consensus 72 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 151 (280)
T 3tox_A 72 HEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA 151 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC
Confidence 666654 79999999996521 3568899999999999999988642 23459999999765421
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. +....|...+..+ ..+++.++.+.. ..|+.+..++||.|..+
T Consensus 152 ~~---------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gIrvn~v~PG~v~T~ 195 (280)
T 3tox_A 152 GF---------------------------AGVAPYAASKAGL--------IGLVQALAVELG-ARGIRVNALLPGGTDTP 195 (280)
T ss_dssp CC---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHH-TTTEEEEEEEECSBSST
T ss_pred CC---------------------------CCchhHHHHHHHH--------HHHHHHHHHHhh-hcCeEEEEEEECCCCCc
Confidence 00 1111122111111 123344443332 34899999999999764
Q ss_pred ccCC-ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEP-FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p-~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... .++.. ....... ........+..++|+|++++.++..... --.++++++.++
T Consensus 196 ~~~~~~~~~~------~~~~~~~---------~~~~p~~r~~~pedvA~~v~~L~s~~a~--~itG~~i~vdGG 252 (280)
T 3tox_A 196 ANFANLPGAA------PETRGFV---------EGLHALKRIARPEEIAEAALYLASDGAS--FVTGAALLADGG 252 (280)
T ss_dssp TSGGGSTTCC------THHHHHH---------HTTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhhccccC------HHHHHHH---------hccCccCCCcCHHHHHHHHHHHhCcccc--CCcCcEEEECCC
Confidence 3211 11000 0000000 0011123467889999999988765332 234689999887
No 176
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.58 E-value=4.5e-14 Score=138.81 Aligned_cols=227 Identities=11% Similarity=0.044 Sum_probs=138.0
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
..++|+|+||||+|+||++++++|++.|. +|++.+....+.+.+.... ......++.++.+|++++ ++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~------~~v 90 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM---AVAVSHSERNDHVSTWLMH--ERDAGRDFKAYAVDVADF------ESC 90 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEECSCHHHHHHHHHH--HHTTTCCCEEEECCTTCH------HHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCchHHHHHHHHH--HHhcCCceEEEEecCCCH------HHH
Confidence 36789999999999999999999999876 4555442111222111100 001235789999999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||........
T Consensus 91 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 170 (269)
T 3gk3_A 91 ERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF 170 (269)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC
Confidence 66654 79999999997542 3567889999999999999887531 2456899999975533211
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
....|...+..+ ..+++.++.+... .|+++..++||.|..+..
T Consensus 171 ----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~v~~v~PG~v~T~~~ 213 (269)
T 3gk3_A 171 ----------------------------GQANYASAKAGI--------HGFTKTLALETAK-RGITVNTVSPGYLATAMV 213 (269)
T ss_dssp ----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCTTT
T ss_pred ----------------------------CcchHHHHHHHH--------HHHHHHHHHHhhh-cCCEEEEEecCcccchhh
Confidence 111111111111 1234444444332 489999999999966433
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+... .. ..... ......+..++|+|++++.++..... .-.++++++.++
T Consensus 214 ~~~~~~~---------~~---~~~~~-----~~~~~~~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdgG 265 (269)
T 3gk3_A 214 EAVPQDV---------LE---AKILP-----QIPVGRLGRPDEVAALIAFLCSDDAG--FVTGADLAINGG 265 (269)
T ss_dssp TC-------------------CCSGG-----GCTTSSCBCHHHHHHHHHHHTSTTCT--TCCSCEEEESTT
T ss_pred hhhchhH---------HH---HHhhh-----cCCcCCccCHHHHHHHHHHHhCCCcC--CeeCcEEEECCC
Confidence 2211100 00 00000 00113456789999999887754321 234689999887
No 177
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.57 E-value=9.5e-15 Score=144.92 Aligned_cols=245 Identities=12% Similarity=0.021 Sum_probs=144.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--------------hHHHHHHHcCCchhhhccCcEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--------------LFKCLKQTYGKSYQAFMLSKLVPAVGN 173 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--------------~~~~l~~~~~~~~~~~~~~kv~~v~GD 173 (554)
+++|+||||||+|+||++++++|++.|. +|++++.. ..+.+..... ....++.++.+|
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D 79 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA---DIILFDICHDIETNEYPLATSRDLEEAGLEVE-----KTGRKAYTAEVD 79 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH-----HTTSCEEEEECC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcccccccccccchhhhHHHHHHHHHHH-----hcCCceEEEEcc
Confidence 5789999999999999999999999886 45554321 1122222111 124588999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEe
Q 042694 174 VCENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVS 240 (554)
Q Consensus 174 l~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vS 240 (554)
++++ ++.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+-.++|++|
T Consensus 80 ~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 80 VRDR------AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 9987 77666654 79999999998643 3678899999999999999999753 2345899999
Q ss_pred eceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEc
Q 042694 241 TAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIR 320 (554)
Q Consensus 241 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~R 320 (554)
|...+..... .+..+. ........|..+|... ..+++.++.+... .|+.+..++
T Consensus 154 S~~~~~~~~~----~~~~~~-------------------~~~~~~~~Y~asK~a~--~~~~~~la~e~~~-~gi~vn~v~ 207 (287)
T 3pxx_A 154 SVAGLIAAAQ----PPGAGG-------------------PQGPGGAGYSYAKQLV--DSYTLQLAAQLAP-QSIRANVIH 207 (287)
T ss_dssp CHHHHHHHHC----CC------------------------CHHHHHHHHHHHHHH--HHHHHHHHHHHGG-GTCEEEEEE
T ss_pred cchhcccccc----cccccc-------------------cCCCccchHHHHHHHH--HHHHHHHHHHHhh-cCcEEEEEe
Confidence 9876543210 000000 0001112222221100 1233344333322 489999999
Q ss_pred cceeeecccCCcccc---ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEe
Q 042694 321 PSVIESTCKEPFSGW---MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQI 397 (554)
Q Consensus 321 p~~V~g~~~~p~~g~---~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~ 397 (554)
||.|..+.....+.+ .... ..+.. ......++........+..++|+|++++.++..... --.+.++++
T Consensus 208 PG~v~T~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~--~itG~~i~v 279 (287)
T 3pxx_A 208 PTNVNTDMLNSAPMYRQFRPDL--EAPSR----ADALLAFPAMQAMPTPYVEASDISNAVCFLASDESR--YVTGLQFKV 279 (287)
T ss_dssp ESSBSSTTTSSHHHHHHHCTTS--SSCCH----HHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred cCccccccccccchhhhhcccc--ccchh----HHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhc--CCCCceEeE
Confidence 999976543221110 0000 00000 000000000011114678899999999988754331 234689999
Q ss_pred eCC
Q 042694 398 ASS 400 (554)
Q Consensus 398 ~~~ 400 (554)
.++
T Consensus 280 dGG 282 (287)
T 3pxx_A 280 DAG 282 (287)
T ss_dssp STT
T ss_pred Cch
Confidence 887
No 178
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.57 E-value=1.8e-14 Score=141.20 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=141.2
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ...++.++.+|++++ +
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~ 73 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA---DLVLAARTVERLEDVAKQVTD-----TGRRALSVGTDITDD------A 73 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------H
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------H
Confidence 46789999999999999999999999886 45555432 22222222211 235789999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ .+|++||+|+... + .+.++..+++|+.|+..+++.+... ++-.++|++||......
T Consensus 74 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 153 (264)
T 3ucx_A 74 QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS 153 (264)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC
Confidence 7666654 7899999998742 1 2567889999999999999887542 11259999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+..+ ..+++.++.+.. ..|+++..++||.|.++
T Consensus 154 ~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~vn~v~PG~v~t~ 196 (264)
T 3ucx_A 154 Q----------------------------AKYGAYKMAKSAL--------LAMSQTLATELG-EKGIRVNSVLPGYIWGG 196 (264)
T ss_dssp C----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHH-TTTCEEEEEEESSCBSH
T ss_pred C----------------------------CccHHHHHHHHHH--------HHHHHHHHHHhC-ccCeEEEEEecCccccc
Confidence 1 1111121111111 123344443332 35899999999999765
Q ss_pred ccCCccccc-cCCC-CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWM-EGNR-MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~-~~~~-~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
......... .... ......... .+..-...+..++|+|++++.++..... .-.++++++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 260 (264)
T 3ucx_A 197 TLKSYFEHQAGKYGTSVEDIYNAA---------AAGSDLKRLPTEDEVASAILFMASDLAS--GITGQALDVNCG 260 (264)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHH---------HTTSSSSSCCBHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cHHHHHHhhhhhcCCCHHHHHHHH---------hccCCcccCCCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 321110000 0000 000000000 0111123577899999999888765332 234689999877
No 179
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.57 E-value=2.7e-14 Score=140.93 Aligned_cols=226 Identities=11% Similarity=0.043 Sum_probs=140.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+. ...++..+.+|++++ ++
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~d~------~~ 89 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC---HVLCADIDGDAADAAATK--------IGCGAAACRVDVSDE------QQ 89 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHH--------HCSSCEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH--------cCCcceEEEecCCCH------HH
Confidence 6789999999999999999999999886 55655432 22222222 234778899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 90 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 169 (277)
T 3gvc_A 90 IIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV 169 (277)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence 666554 78999999997543 3568899999999999999888542 345689999997553321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+... ..+++.++.+.. ..|+++.+++||.|.++.
T Consensus 170 ----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 170 ----------------------------GGTGAYGMSKAGI--------IQLSRITAAELR-SSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp ----------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCHH
T ss_pred ----------------------------CCchhHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEeeCCccCch
Confidence 1111121111111 123444443333 248999999999997753
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
......... ............ .. ....+..++|+|++++.++..... --.++++++.++
T Consensus 213 ~~~~~~~~~-----~~~~~~~~~~~~-~~-----~~~r~~~pedvA~~v~~L~s~~a~--~itG~~i~vdGG 271 (277)
T 3gvc_A 213 QQTAMAMFD-----GALGAGGARSMI-AR-----LQGRMAAPEEMAGIVVFLLSDDAS--MITGTTQIADGG 271 (277)
T ss_dssp HHHHHTCC-----------CCHHHHH-HH-----HHSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred HHHhhhcch-----hhHHHHhhhhhh-hc-----cccCCCCHHHHHHHHHHHcCCccC--CccCcEEEECCc
Confidence 211000000 000000000000 00 012467899999999988765332 234689999887
No 180
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.57 E-value=3.4e-14 Score=140.51 Aligned_cols=223 Identities=13% Similarity=0.072 Sum_probs=130.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||+|+||+++++.|++.|. +|++++. +..+.+.+.... ...++.++.+|++++ +
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~ 92 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF---DIAITGIGDAEGVAPVIAELSG-----LGARVIFLRADLADL------S 92 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCHHHHHHHHHHHHH-----TTCCEEEEECCTTSG------G
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC---eEEEEeCCCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------H
Confidence 5688999999999999999999999886 4555432 222222222211 235789999999998 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCC---------chhhHHHHHHHhchHHHHHHHHHHHc---CC---CceEEEEeec
Q 042694 185 LADVIAK-------EVDVIVNSAANTT---------FDERYDIAIDINTRGPCRLMEFAKQC---NK---LKLFVQVSTA 242 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~---------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~---~k~~v~vST~ 242 (554)
+.+.+.+ .+|++||+||... -.+.++..+++|+.|+..+++.+... .+ ..++|++||.
T Consensus 93 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~ 172 (280)
T 4da9_A 93 SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSV 172 (280)
T ss_dssp GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcch
Confidence 6666654 7999999999732 13567889999999999999887642 11 4589999997
Q ss_pred eecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccc
Q 042694 243 YVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPS 322 (554)
Q Consensus 243 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~ 322 (554)
....... ....|...+... ..+++.++.+.. ..|+++..++||
T Consensus 173 ~~~~~~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG 215 (280)
T 4da9_A 173 SAVMTSP----------------------------ERLDYCMSKAGL--------AAFSQGLALRLA-ETGIAVFEVRPG 215 (280)
T ss_dssp -----------------------------------CCHHHHHHHHHH--------HHHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred hhccCCC----------------------------CccHHHHHHHHH--------HHHHHHHHHHHH-HhCcEEEEEeec
Confidence 6543211 011111111111 123344443332 358999999999
Q ss_pred eeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|..+......... ......+..+ ...+..++|+|++++.++..... --.++++++.++
T Consensus 216 ~v~T~~~~~~~~~~---------~~~~~~~~~p--------~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 274 (280)
T 4da9_A 216 IIRSDMTAAVSGKY---------DGLIESGLVP--------MRRWGEPEDIGNIVAGLAGGQFG--FATGSVIQADGG 274 (280)
T ss_dssp CBCC---------------------------------------CCBCHHHHHHHHHHHHTSTTG--GGTTCEEEESTT
T ss_pred CCcCCchhhcchhH---------HHHHhhcCCC--------cCCcCCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 99764332211100 0000011111 12466789999999888764321 123689999876
No 181
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.57 E-value=3.4e-14 Score=141.34 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=140.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|. +|++.+.. ..+.+.+.... ...++.++.+|++++ +
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~ 110 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA---NIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDE------Q 110 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSH------H
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCH------H
Confidence 5789999999999999999999999886 44544322 12222222111 245789999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~ 248 (554)
+.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...+...
T Consensus 111 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~ 190 (291)
T 3ijr_A 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN 190 (291)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC
Confidence 6666654 79999999996531 3567899999999999999999753 234589999998664331
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+... .|+.+..++||.|.++.
T Consensus 191 ~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 191 E----------------------------TLIDYSATKGAI--------VAFTRSLSQSLVQ-KGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCSTH
T ss_pred C----------------------------CChhHHHHHHHH--------HHHHHHHHHHHhh-cCEEEEEEeeCCCcCCc
Confidence 1 111121111111 1233444433333 48999999999997643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. ...+ ......+. ...-...+..++|+|++++.++..... .-.++++++.++
T Consensus 234 ~~---~~~~-----~~~~~~~~---------~~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 286 (291)
T 3ijr_A 234 IP---SSFD-----EKKVSQFG---------SNVPMQRPGQPYELAPAYVYLASSDSS--YVTGQMIHVNGG 286 (291)
T ss_dssp HH---HHSC-----HHHHHHTT---------TTSTTSSCBCGGGTHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred cc---ccCC-----HHHHHHHH---------ccCCCCCCcCHHHHHHHHHHHhCCccC--CCcCCEEEECCC
Confidence 21 0000 00000000 011123466789999999888765332 234689998876
No 182
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.57 E-value=4.1e-14 Score=138.92 Aligned_cols=232 Identities=12% Similarity=0.044 Sum_probs=136.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... .....++.++.+|++++ ++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------~~ 78 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSEGLEASKAAVLE---TAPDAEVLTTVADVSDE------AQ 78 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH---HCTTCCEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh---hcCCceEEEEEccCCCH------HH
Confidence 5789999999999999999999999876 45555432 12222221110 00134788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||......
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (267)
T 1iy8_A 79 VEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG 158 (267)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC
Confidence 666654 78999999997543 2567889999999988776665321 24679999999865432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+... ..+++.++.+.. ..|+++.+++||.|.++
T Consensus 159 ~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 159 I----------------------------GNQSGYAAAKHGV--------VGLTRNSAVEYG-RYGIRINAIAPGAIWTP 201 (267)
T ss_dssp C----------------------------SSBHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECSBCSH
T ss_pred C----------------------------CCCccHHHHHHHH--------HHHHHHHHHHHH-hcCeEEEEEEeCCCcCc
Confidence 1 1111111111111 123344443332 24899999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...... ................. .. + ...+...+|+|++++.++..... ...++++++.++
T Consensus 202 ~~~~~~-~~~~~~~~~~~~~~~~~-~~------p--~~r~~~~~dvA~~v~~l~s~~~~--~~tG~~i~vdGG 262 (267)
T 1iy8_A 202 MVENSM-KQLDPENPRKAAEEFIQ-VN------P--SKRYGEAPEIAAVVAFLLSDDAS--YVNATVVPIDGG 262 (267)
T ss_dssp HHHHHH-HHHCTTCHHHHHHHHHT-TC------T--TCSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred chhccc-cccChhhhhhHHHHHhc-cC------C--CCCCcCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 321000 00000000000000000 00 1 12467889999999887754321 224678988876
No 183
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.57 E-value=2.3e-14 Score=141.00 Aligned_cols=223 Identities=13% Similarity=0.079 Sum_probs=140.5
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ +
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~------~ 90 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA---MVIGTATTEAGAEGIGAAFKQ-----AGLEGRGAVLNVNDA------T 90 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH-----HTCCCEEEECCTTCH------H
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEEeCCCH------H
Confidence 36789999999999999999999999886 45555432 22222222211 234678899999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||......
T Consensus 91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (270)
T 3ftp_A 91 AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG 170 (270)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC
Confidence 7666655 79999999997542 3568889999999999999988531 23468999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+..+ ..+++.++.+... .|+++.+++||.|..+
T Consensus 171 ~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 171 NP----------------------------GQVNYAAAKAGV--------AGMTRALAREIGS-RGITVNCVAPGFIDTD 213 (270)
T ss_dssp CT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCSH
T ss_pred CC----------------------------CchhHHHHHHHH--------HHHHHHHHHHHhh-hCeEEEEEEeCCCcCc
Confidence 11 111111111111 1244455444433 4899999999998654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.....+.. ...... ...-...+..++|+|++++.++..... .-.++++++.++
T Consensus 214 ~~~~~~~~---------~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 266 (270)
T 3ftp_A 214 MTKGLPQE---------QQTALK---------TQIPLGRLGSPEDIAHAVAFLASPQAG--YITGTTLHVNGG 266 (270)
T ss_dssp HHHHSCHH---------HHHHHH---------TTCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred chhhcCHH---------HHHHHH---------hcCCCCCCCCHHHHHHHHHHHhCCCcC--CccCcEEEECCC
Confidence 32111100 000000 011113467889999999888754321 234689999877
No 184
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.57 E-value=4.3e-14 Score=139.51 Aligned_cols=225 Identities=14% Similarity=0.116 Sum_probs=140.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++++.. ..+.+.+. ...++..+.+|++++ ++
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~d~------~~ 87 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA---YVVVADVNEDAAVRVANE--------IGSKAFGVRVDVSSA------KD 87 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHH--------HCTTEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH--------hCCceEEEEecCCCH------HH
Confidence 5689999999999999999999999886 45555432 22222222 235788999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||...+...
T Consensus 88 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 167 (277)
T 4dqx_A 88 AESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC
Confidence 666655 79999999996532 3567889999999999999888542 234599999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+... .|+.+..++||.|..+.
T Consensus 168 ~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 168 A----------------------------DRTAYVASKGAI--------SSLTRAMAMDHAK-EGIRVNAVAPGTIDSPY 210 (277)
T ss_dssp T----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCHH
T ss_pred C----------------------------CChhHHHHHHHH--------HHHHHHHHHHhhh-cCeEEEEEeeCcCcCch
Confidence 1 111121111111 1234444443332 48999999999996543
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. ................ ........+..++|+|++++.++..... -..++++++.++
T Consensus 211 ~~---~~~~~~~~~~~~~~~~---------~~~~~~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 268 (277)
T 4dqx_A 211 FT---KIFAEAKDPAKLRSDF---------NARAVMDRMGTAEEIAEAMLFLASDRSR--FATGSILTVDGG 268 (277)
T ss_dssp HH---HHHHTCSCHHHHHHHH---------HTTSTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred hh---hhcccccchhHHHHHH---------HhcCcccCCcCHHHHHHHHHHHhCCccC--CCcCCEEEECCc
Confidence 10 0000000000000000 0111123467899999999988765432 234689999887
No 185
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.57 E-value=2.1e-13 Score=134.97 Aligned_cols=233 Identities=13% Similarity=0.048 Sum_probs=138.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||++++++|++.|. +|+++++ ...+.+.+.... ...++.++.+|++++ ++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 91 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV---TVGALGRTRTEVEEVADEIVG-----AGGQAIALEADVSDE------LQ 91 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHTT-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 4678999999999999999999999886 4555543 223333333221 235788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++++... .+..++|++||......
T Consensus 92 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~ 171 (283)
T 3v8b_A 92 MRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT 171 (283)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC
Confidence 666654 79999999997432 3467889999999999999988321 35579999999755321
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. .+....|...+..+ ..+++.++.+.. ..|+.+..++||.|..+
T Consensus 172 ~~--------------------------~~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~T~ 216 (283)
T 3v8b_A 172 FT--------------------------TPGATAYTATKAAQ--------VAIVQQLALELG-KHHIRVNAVCPGAIETN 216 (283)
T ss_dssp CC--------------------------STTCHHHHHHHHHH--------HHHHHHHHHHTT-TTTEEEEEEEECSBSSC
T ss_pred CC--------------------------CCCchHHHHHHHHH--------HHHHHHHHHHhC-ccCcEEEEEEeCCCcCC
Confidence 10 01111121111111 123344443332 34899999999999654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.......... ...........+..+ -..-.+...+|+|++++.++..... --.++++++.++
T Consensus 217 ~~~~~~~~~~---~~~~~~~~~~~~~~p------~~~~r~~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG 278 (283)
T 3v8b_A 217 ISDNTKLRHE---EETAIPVEWPKGQVP------ITDGQPGRSEDVAELIRFLVSERAR--HVTGSPVWIDGG 278 (283)
T ss_dssp TTCCTTBCCH---HHHSCCCBCTTCSCG------GGTTCCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred cccccccccc---hhhhhhhhhhhhcCc------cccCCCCCHHHHHHHHHHHcCcccc--CCcCCEEEECcC
Confidence 3321100000 000000000000000 0002345679999999887754332 234688888776
No 186
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.57 E-value=1.5e-14 Score=141.99 Aligned_cols=233 Identities=15% Similarity=0.175 Sum_probs=139.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+...... ...++.++.+|++++ ++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~------~~ 72 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLEAGVQCKAALHEQF---EPQKTLFIQCDVADQ------QQ 72 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTTTS---CGGGEEEEECCTTSH------HH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhhc---CCCceEEEecCCCCH------HH
Confidence 4678999999999999999999999886 45555432 2222222221100 124688999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHH----HcC--CCceEEEEeeceeccccccee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAK----QCN--KLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~----~~~--~~k~~v~vST~~v~~~~~~~i 252 (554)
.+.+.+ .+|+|||+||... .+.++..+++|+.|+..+.+.+. +.+ +..++|++||...+....
T Consensus 73 v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 148 (267)
T 2gdz_A 73 LRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA--- 148 (267)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC---
Confidence 666654 5799999999754 45678889999997766655543 211 157899999987654311
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhh-----hhhcCCCcEEEEccceeeec
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGL-----GLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~-----~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ..|. .+|...+.+.+. -....|+++.+++||.|.++
T Consensus 149 -------------------------~~------~~Y~------~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 149 -------------------------QQ------PVYC------ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp -------------------------TC------HHHH------HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred -------------------------CC------chHH------HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 00 1111 223222333222 11245899999999999654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccH
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVF 407 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~ 407 (554)
........ .. .... ..... .+ ..+.....+++++|+|++++.++..... .++++++.++ .++++
T Consensus 192 ~~~~~~~~-~~---~~~~-~~~~~-~~----~~~~~~~~~~~~~dvA~~v~~l~s~~~~----~G~~~~v~gg--~~~~~ 255 (267)
T 2gdz_A 192 ILESIEKE-EN---MGQY-IEYKD-HI----KDMIKYYGILDPPLIANGLITLIEDDAL----NGAIMKITTS--KGIHF 255 (267)
T ss_dssp HHHGGGCH-HH---HGGG-GGGHH-HH----HHHHHHHCCBCHHHHHHHHHHHHHCTTC----SSCEEEEETT--TEEEE
T ss_pred hhhccccc-cc---cchh-hhHHH-HH----HHHhccccCCCHHHHHHHHHHHhcCcCC----CCcEEEecCC--Ccccc
Confidence 22110000 00 0000 00000 00 0000113467899999999988865432 3689999987 56665
Q ss_pred HH
Q 042694 408 QD 409 (554)
Q Consensus 408 ~e 409 (554)
.|
T Consensus 256 ~~ 257 (267)
T 2gdz_A 256 QD 257 (267)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 187
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.57 E-value=3.3e-14 Score=141.40 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=96.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|++.++.. +++.+.... ...++.++.+|++++ +..+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~Dl~d~------~~v~ 78 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA---TVIMAVRDT-RKGEAAART-----MAGQVEVRELDLQDL------SSVR 78 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHTT-----SSSEEEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHHHH-----hcCCeeEEEcCCCCH------HHHH
Confidence 5789999999999999999999999876 456554321 222222211 245789999999988 8888
Q ss_pred HHhc---CccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 188 VIAK---EVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 188 ~l~~---~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
.+.+ ++|++||+||.... .+.++..+++|+.|+..+++++... ..+++|++||...+..
T Consensus 79 ~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~ 145 (291)
T 3rd5_A 79 RFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPG 145 (291)
T ss_dssp HHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTC
T ss_pred HHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccC
Confidence 8876 67999999997542 3567789999999999999999874 4569999999876543
No 188
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.56 E-value=6e-14 Score=138.71 Aligned_cols=234 Identities=16% Similarity=0.127 Sum_probs=137.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+..... .....++.++.+|++++ ++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~------~~ 72 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTE------DG 72 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCH------HH
Confidence 4678999999999999999999999876 45555432 222222221110 00012788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+ .++|++||...
T Consensus 73 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~ 151 (280)
T 1xkq_A 73 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA 151 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc
Confidence 666554 79999999996532 2457889999999999999988642 13 69999999865
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
+.... +....|...+... ..+++.++.+.. ..|+++.+++||.|
T Consensus 152 ~~~~~---------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v 195 (280)
T 1xkq_A 152 GPQAQ---------------------------PDFLYYAIAKAAL--------DQYTRSTAIDLA-KFGIRVNSVSPGMV 195 (280)
T ss_dssp SSSCC---------------------------CSSHHHHHHHHHH--------HHHHHHHHHHHH-TTTCEEEEEEECCB
T ss_pred cCCCC---------------------------CcccHHHHHHHHH--------HHHHHHHHHHhc-cCCeEEEEEeeCcC
Confidence 43210 0111111111111 123333333322 35899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh-cccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH-GMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~-~~~~~~~~~vyn~~~~ 400 (554)
.++........................ .. + ...+..++|+|++++.++... .. ...++++++.++
T Consensus 196 ~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~------p--~~~~~~pedvA~~v~~l~s~~~~~--~~tG~~i~vdgG 261 (280)
T 1xkq_A 196 ETGFTNAMGMPDQASQKFYNFMASHKE-CI------P--IGAAGKPEHIANIILFLADRNLSF--YILGQSIVADGG 261 (280)
T ss_dssp CSSHHHHTTCCHHHHHHHHHHHHHCTT-TC------T--TSSCBCHHHHHHHHHHHHCHHHHT--TCCSCEEEESTT
T ss_pred cCCcccccccccccccchHHHHHHHHc-CC------C--CCCCCCHHHHHHHHHHhcCccccc--CccCCeEEECCC
Confidence 765321100000000000000000000 00 1 124778999999998887553 21 123679998877
No 189
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.56 E-value=2.8e-14 Score=140.94 Aligned_cols=219 Identities=14% Similarity=0.035 Sum_probs=134.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.+. +|+++++ ...+.+.+.... ...++..+.+|++++ ++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 97 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA---DVAIWYNSHPADEKAEHLQKT-----YGVHSKAYKCNISDP------KS 97 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC---EEEEEESSSCCHHHHHHHHHH-----HCSCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcceEEEeecCCH------HH
Confidence 5689999999999999999999999886 4555432 222233222110 234788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchH----HHHHHHHHHHcCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRG----PCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
++.+.+ .+|+|||+||.... .+.++..+++|+.| ++.+++.+++ .+..++|++||...+
T Consensus 98 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~~~iv~isS~~~~ 176 (279)
T 3ctm_A 98 VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK-NGKGSLIITSSISGK 176 (279)
T ss_dssp HHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCCEEEEECCCTTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCeEEEECchHhc
Confidence 666654 49999999986533 23567889999999 5677777766 367899999997653
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccc
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPS 322 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~ 322 (554)
.... . +.. .. |..+|...+.+.+... ...+ .+.+++||
T Consensus 177 ~~~~-------~-------------------~~~------~~------Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg 217 (279)
T 3ctm_A 177 IVNI-------P-------------------QLQ------AP------YNTAKAACTHLAKSLAIEWAPFA-RVNTISPG 217 (279)
T ss_dssp CC-----------------------------CCH------HH------HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEEC
T ss_pred cCCC-------C-------------------CCc------cc------HHHHHHHHHHHHHHHHHHhcccC-CEEEEecc
Confidence 2200 0 000 11 2222333333333222 1246 99999999
Q ss_pred eeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|..+.....+ ........ ... + ...+++++|+|++++.++..... ...++++++.++
T Consensus 218 ~v~t~~~~~~~---------~~~~~~~~-~~~------p--~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~i~vdgG 275 (279)
T 3ctm_A 218 YIDTDITDFAS---------KDMKAKWW-QLT------P--LGREGLTQELVGGYLYLASNAST--FTTGSDVVIDGG 275 (279)
T ss_dssp SBSSTTTSSCC---------HHHHHHHH-HHS------T--TCSCBCGGGTHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CCccccccccC---------hHHHHHHH-HhC------C--ccCCcCHHHHHHHHHHHhCcccc--CccCCEEEECCC
Confidence 98654321100 00000000 000 1 12478899999999988765321 234678998876
No 190
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.56 E-value=1.6e-13 Score=133.38 Aligned_cols=223 Identities=14% Similarity=0.169 Sum_probs=129.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++..- .. ...+..+.+|++++ ++.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~------~~-------~~~~~~~~~D~~d~------~~~~ 62 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA---KVTGFDQAFT------QE-------QYPFATEVMDVADA------AQVA 62 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCCC------SS-------CCSSEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCchh------hh-------cCCceEEEcCCCCH------HHHH
Confidence 4678999999999999999999999886 4555543210 00 01267899999987 7777
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ ++|++||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||...+...
T Consensus 63 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-- 140 (250)
T 2fwm_X 63 QVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-- 140 (250)
T ss_dssp HHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC--
Confidence 6665 79999999997542 3568899999999999999988321 246799999998664321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+....|...+... ..+++.++.+.. ..|+++.++|||.|.++...
T Consensus 141 --------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~ 185 (250)
T 2fwm_X 141 --------------------------IGMSAYGASKAAL--------KSLALSVGLELA-GSGVRCNVVSPGSTDTDMQR 185 (250)
T ss_dssp --------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECCC------
T ss_pred --------------------------CCCchHHHHHHHH--------HHHHHHHHHHhC-ccCCEEEEEECCcccCcccc
Confidence 1111111111111 123333333322 34899999999999875432
Q ss_pred CccccccCCCCcc-ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMD-PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~-~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... ... .... . +........... + ...+...+|+|++++.++..... ...++++++.++
T Consensus 186 ~~~--~~~-~~~~~~-~~~~~~~~~~~~---p--~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG 245 (250)
T 2fwm_X 186 TLW--VSD-DAEEQR-IRGFGEQFKLGI---P--LGKIARPQEIANTILFLASDLAS--HITLQDIVVDGG 245 (250)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccc--cCh-hHHHHH-HhhhhhcccccC---C--CCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 110 000 0000 0 000000000000 1 12367889999999988765321 234678888776
No 191
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.56 E-value=2.6e-14 Score=141.26 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=138.4
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
..++|+||||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ...++..+.+|++++ +
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~ 86 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI---AVYGCARDAKNVSAAVDGLRA-----AGHDVDGSSCDVTST------D 86 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHT-----TTCCEEEEECCTTCH------H
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH------H
Confidence 45789999999999999999999999886 45555432 22222222211 235789999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH---c--CCCceEEEEeeceec
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ---C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~---~--~~~k~~v~vST~~v~ 245 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+.. + .+..++|++||....
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~ 166 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK 166 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhc
Confidence 6666554 78999999997542 346788899999999999998865 1 244699999997654
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
.... ....|...+..+ ..+++.++.+... .|+++..++||.|.
T Consensus 167 ~~~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~ 209 (279)
T 3sju_A 167 QGVM----------------------------YAAPYTASKHGV--------VGFTKSVGFELAK-TGITVNAVCPGYVE 209 (279)
T ss_dssp SCCT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHTGG-GTEEEEEEEESSBC
T ss_pred cCCC----------------------------CChhHHHHHHHH--------HHHHHHHHHHHHh-hCcEEEEEeeCccc
Confidence 3211 111121111111 1244444444333 48999999999996
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++..... ........... .......+ ....-...+..++|+|++++.++..... --.++++++.++
T Consensus 210 T~~~~~~---~~~~~~~~~~~---~~~~~~~~-~~~~p~~r~~~pedvA~~v~~L~s~~a~--~itG~~i~vdGG 275 (279)
T 3sju_A 210 TPMAERV---REGYARHWGVT---EQEVHERF-NAKIPLGRYSTPEEVAGLVGYLVTDAAA--SITAQALNVCGG 275 (279)
T ss_dssp SHHHHHH---HHSCCSSSCCC---HHHHHHHH-HTTCTTSSCBCHHHHHHHHHHHTSSGGG--GCCSCEEEESTT
T ss_pred chHHHHH---HhhhhhcccCC---hHHHHHHH-HhcCCCCCCCCHHHHHHHHHHHhCcccc--CcCCcEEEECCC
Confidence 6432110 00000000000 00000000 0111123467899999999887754321 124689998876
No 192
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.56 E-value=1.7e-14 Score=141.91 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=140.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.++... ...++.++.+|++++ ++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 89 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA---RILINGTDPSRVAQTVQEFRN-----VGHDAEAVAFDVTSE------SE 89 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHHHHHHHHHHHHH-----TTCCEEECCCCTTCH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEcCCCCH------HH
Confidence 5789999999999999999999999886 56665432 22222222211 235788999999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||.......
T Consensus 90 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~ 169 (271)
T 4ibo_A 90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR 169 (271)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC
Confidence 766665 79999999997532 3567889999999999998887542 244689999997543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+..+ ..+++.++.+.. ..|+++..++||.|..+.
T Consensus 170 ----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 170 ----------------------------ATVAPYTVAKGGI--------KMLTRAMAAEWA-QYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCSGG
T ss_pred ----------------------------CCchhHHHHHHHH--------HHHHHHHHHHHh-hhCeEEEEEEeccEeCcc
Confidence 1111122112111 123444444333 248999999999997643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... +.+. ......... .. + ...+..++|+|++++.++..... --.++++++.++
T Consensus 213 ~~~---~~~~----~~~~~~~~~-~~------p--~~r~~~pedva~~v~~L~s~~~~--~itG~~i~vdGG 266 (271)
T 4ibo_A 213 NQA---LIDN----PEFDAWVKA-RT------P--AKRWGKPQELVGTAVFLSASASD--YVNGQIIYVDGG 266 (271)
T ss_dssp GHH---HHHC----HHHHHHHHH-HS------T--TCSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhh---cccC----HHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccc--CCCCcEEEECCC
Confidence 211 1000 000000000 00 0 12356789999999887765331 234689999887
No 193
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.56 E-value=5.8e-14 Score=136.69 Aligned_cols=226 Identities=12% Similarity=0.015 Sum_probs=136.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++.. +++.+.... ...++.++.+|++++ ++.+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~D~~~~------~~v~ 68 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINE-AAGQQLAAE-----LGERSMFVRHDVSSE------ADWT 68 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCH-HHHHHHHHH-----HCTTEEEECCCTTCH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----cCCceEEEEccCCCH------HHHH
Confidence 4688999999999999999999999876 566665432 222221110 134788999999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|++||+|+.... .+.++..+++|+.|+..+.+.+.. + .+ .++|++||...+....
T Consensus 69 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~- 146 (253)
T 1hxh_A 69 LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE- 146 (253)
T ss_dssp HHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC-
Confidence 6554 57999999997543 356788999999998877776543 1 24 7999999986643211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-CCCcEEEEccceeeeccc
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-GDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-~glp~~I~Rp~~V~g~~~ 329 (554)
....|...+... ..+++.++.+.... .|+++.++|||.|.++..
T Consensus 147 ---------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 191 (253)
T 1hxh_A 147 ---------------------------QYAGYSASKAAV--------SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM 191 (253)
T ss_dssp ---------------------------TBHHHHHHHHHH--------HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred ---------------------------CCccHHHHHHHH--------HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence 111111111111 11233333332222 289999999999987542
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. +... ......+ .... ... + ...+..++|+|++++.++..... ...++++++.++
T Consensus 192 ~~---~~~~-~~~~~~~---~~~~-~~~---p--~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG 247 (253)
T 1hxh_A 192 QA---SLPK-GVSKEMV---LHDP-KLN---R--AGRAYMPERIAQLVLFLASDESS--VMSGSELHADNS 247 (253)
T ss_dssp HH---HSCT-TCCHHHH---BCBT-TTB---T--TCCEECHHHHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred hh---ccch-hhhHHHH---hhhh-ccC---c--cCCCCCHHHHHHHHHHHcCcccc--CCCCcEEEECCC
Confidence 11 0000 0000000 0000 000 1 12467889999999988765321 234678888776
No 194
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.56 E-value=7.1e-14 Score=136.83 Aligned_cols=124 Identities=16% Similarity=0.209 Sum_probs=91.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++||||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 92 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA---RVVLTARDVEKLRAVEREIVA-----AGGEAESHACDLSHS------DA 92 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHH-----hCCceeEEEecCCCH------HH
Confidence 5689999999999999999999999876 45555432 22222222211 235788999999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|+|||+||... + .+.++..+++|+.|+..+++.+... .+..++|++||...+
T Consensus 93 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 170 (262)
T 3rkr_A 93 IAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK 170 (262)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence 666554 5999999999732 1 3467889999999999999887541 356799999997654
No 195
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.56 E-value=8.1e-14 Score=138.17 Aligned_cols=223 Identities=16% Similarity=0.109 Sum_probs=135.7
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+|+||||+ |+||++++++|++.|. +|+++++.. .+.+.+... ...++.++.+|++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~l~~------~~~~~~~~~~Dl~~~------ 83 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA---QLAFTYATPKLEKRVREIAK------GFGSDLVVKCDVSLD------ 83 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHHHH------HTTCCCEEECCTTCH------
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHH------hcCCeEEEEcCCCCH------
Confidence 568999999999 9999999999999876 455553321 111211110 012367899999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHcC--CCceEEEEeece
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQCN--KLKLFVQVSTAY 243 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~~--~~k~~v~vST~~ 243 (554)
+..+.+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+...- +-.++|++||..
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~ 163 (285)
T 2p91_A 84 EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYG 163 (285)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccch
Confidence 76666654 78999999997542 24678899999999999999997531 226999999975
Q ss_pred ecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 244 VNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 244 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
..... +....|...+.... .+++.++.+.. ..|+++.+++||.
T Consensus 164 ~~~~~----------------------------~~~~~Y~~sK~a~~--------~~~~~la~e~~-~~gi~v~~v~PG~ 206 (285)
T 2p91_A 164 AEKVV----------------------------PHYNVMGIAKAALE--------STVRYLAYDIA-KHGHRINAISAGP 206 (285)
T ss_dssp GTSBC----------------------------TTTTHHHHHHHHHH--------HHHHHHHHHHH-TTTCEEEEEEECC
T ss_pred hccCC----------------------------CCccHHHHHHHHHH--------HHHHHHHHHhc-ccCcEEEEEEeCc
Confidence 53321 11111222121111 22333333322 3589999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|.++.....+.. ......... .. + ...+..++++|++++.++..... ...+.+|++.++
T Consensus 207 v~t~~~~~~~~~-------~~~~~~~~~-~~------p--~~~~~~~~dva~~~~~l~s~~~~--~~tG~~~~vdgg 265 (285)
T 2p91_A 207 VKTLAAYSITGF-------HLLMEHTTK-VN------P--FGKPITIEDVGDTAVFLCSDWAR--AITGEVVHVDNG 265 (285)
T ss_dssp CCCSCC--CTTH-------HHHHHHHHH-HS------T--TSSCCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred ccCchhhcccch-------HHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHcCCccc--CCCCCEEEECCC
Confidence 977543211110 000000000 00 0 12356789999999888754321 224678998876
No 196
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.55 E-value=7.3e-14 Score=136.28 Aligned_cols=217 Identities=13% Similarity=0.111 Sum_probs=135.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|++++...- .+.+. ...++.++.+|++++ ++.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~-~~~~~--------~~~~~~~~~~D~~~~------~~v~ 68 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGA---QVVVLDIRGE-DVVAD--------LGDRARFAAADVTDE------AAVA 68 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCH-HHHHH--------TCTTEEEEECCTTCH------HHHH
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCchH-HHHHh--------cCCceEEEECCCCCH------HHHH
Confidence 4689999999999999999999999986 4565554322 22222 235788999999987 7766
Q ss_pred HHhc------CccEEEEcCCCCC-----------chhhHHHHHHHhchHHHHHHHHHHHc-----------CCCceEEEE
Q 042694 188 VIAK------EVDVIVNSAANTT-----------FDERYDIAIDINTRGPCRLMEFAKQC-----------NKLKLFVQV 239 (554)
Q Consensus 188 ~l~~------~vdiViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~la~~~-----------~~~k~~v~v 239 (554)
.+.+ .+|++||+||... -.+.++..+++|+.|+..+++.+... .+-.++|++
T Consensus 69 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 148 (257)
T 3tl3_A 69 SALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINT 148 (257)
T ss_dssp HHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEE
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEE
Confidence 6665 8999999999742 23467899999999999999998753 123479999
Q ss_pred eeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEE
Q 042694 240 STAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVII 319 (554)
Q Consensus 240 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~ 319 (554)
||...+....+ ...|..+|... ..+++.++.+... .|+.+..+
T Consensus 149 sS~~~~~~~~~----------------------------------~~~Y~asKaa~--~~~~~~la~e~~~-~gI~vn~v 191 (257)
T 3tl3_A 149 ASVAAFDGQIG----------------------------------QAAYSASKGGV--VGMTLPIARDLAS-HRIRVMTI 191 (257)
T ss_dssp CCCC--CCHHH----------------------------------HHHHHHHHHHH--HHHHHHHHHHHGG-GTEEEEEE
T ss_pred cchhhcCCCCC----------------------------------CccHHHHHHHH--HHHHHHHHHHhcc-cCcEEEEE
Confidence 99765432110 01222221000 1244444444333 48999999
Q ss_pred ccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeC
Q 042694 320 RPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIAS 399 (554)
Q Consensus 320 Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~ 399 (554)
+||.|..+.....+. ........ ..+ ....+...+|++++++.++.... -.++++++.+
T Consensus 192 ~PG~v~T~~~~~~~~---------~~~~~~~~-~~~-------~~~r~~~p~dva~~v~~l~s~~~----itG~~i~vdG 250 (257)
T 3tl3_A 192 APGLFDTPLLASLPE---------EARASLGK-QVP-------HPSRLGNPDEYGALAVHIIENPM----LNGEVIRLDG 250 (257)
T ss_dssp EECSBCCTTC---CH---------HHHHHHHH-TSS-------SSCSCBCHHHHHHHHHHHHHCTT----CCSCEEEEST
T ss_pred EecCccChhhhhccH---------HHHHHHHh-cCC-------CCCCccCHHHHHHHHHHHhcCCC----CCCCEEEECC
Confidence 999986543211110 00000000 000 01246788999999998886533 2468999887
Q ss_pred C
Q 042694 400 S 400 (554)
Q Consensus 400 ~ 400 (554)
+
T Consensus 251 G 251 (257)
T 3tl3_A 251 A 251 (257)
T ss_dssp T
T ss_pred C
Confidence 7
No 197
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.55 E-value=1.1e-13 Score=136.71 Aligned_cols=237 Identities=16% Similarity=0.129 Sum_probs=142.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----------hHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
+++|+||||||+|+||++++++|++.|.+ |++++.. ..+.+.+.... ......++.++.+|+++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGAD---IIAVDLCDQIASVPYPLATPEELAATVKL--VEDIGSRIVARQADVRD 85 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHHH--HHHHTCCEEEEECCTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecccccccccccccchHHHHHHHHH--HHhcCCeEEEEeCCCCC
Confidence 57899999999999999999999998864 5544321 01222211110 01124588999999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeec
Q 042694 177 NNLGLEEDLADVIAK-------EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTA 242 (554)
Q Consensus 177 ~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~ 242 (554)
+ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+... ++-.++|++||.
T Consensus 86 ~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~ 159 (278)
T 3sx2_A 86 R------ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS 159 (278)
T ss_dssp H------HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred H------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence 8 77776665 79999999997643 4678899999999999999987542 124589999998
Q ss_pred eecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccc
Q 042694 243 YVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPS 322 (554)
Q Consensus 243 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~ 322 (554)
........ . .+ ....|..+|... ..+++.++.+.. ..|+++..++||
T Consensus 160 ~~~~~~~~-----------~-------------~~------~~~~Y~asKaa~--~~~~~~la~e~~-~~gi~vn~v~PG 206 (278)
T 3sx2_A 160 AGLAGVGS-----------A-------------DP------GSVGYVAAKHGV--VGLMRVYANLLA-GQMIRVNSIHPS 206 (278)
T ss_dssp GGTSCCCC-----------S-------------SH------HHHHHHHHHHHH--HHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred HhcCCCcc-----------C-------------CC------CchHhHHHHHHH--HHHHHHHHHHHh-ccCcEEEEEecC
Confidence 65432100 0 00 011222221000 123444443333 348999999999
Q ss_pred eeeecccCCcc--ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFS--GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~--g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.|.++...... .+... .. ..........+.. ...++.++|+|++++.++..... --.++++++.++
T Consensus 207 ~v~T~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~-p~~~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG 274 (278)
T 3sx2_A 207 GVETPMINNEFTREWLAK----MA-----AATDTPGAMGNAM-PVEVLAPEDVANAVAWLVSDQAR--YITGVTLPVDAG 274 (278)
T ss_dssp CBSSTTTSSHHHHHHHHH----HH-----HHCC--CTTSCSS-SCSSBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred CccCccchhhhHHHHHhh----cc-----chhhhhhhhhhhc-CcCcCCHHHHHHHHHHHhCcccc--cccCCEEeECCC
Confidence 99765432100 01000 00 0000000000111 14678899999999888755331 234689998876
No 198
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.55 E-value=1.5e-13 Score=134.66 Aligned_cols=225 Identities=12% Similarity=0.098 Sum_probs=140.6
Q ss_pred ccCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGF--LAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGF--lG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||+|+ ||++++++|++.|. +|+++++ ...+.+.+.... ....++.++.+|++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~------ 71 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA---RLIFTYAGERLEKSVHELAGT----LDRNDSIILPCDVTND------ 71 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHHHHT----SSSCCCEEEECCCSSS------
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEecCchHHHHHHHHHHHh----cCCCCceEEeCCCCCH------
Confidence 46899999999999 99999999999886 4555432 222223222111 0123789999999998
Q ss_pred HHHHHHhc-------CccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 184 DLADVIAK-------EVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
++.+.+.+ .+|++||+|+... + .+.+...+++|+.|+..+++.+... .+-.++|++||...
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 151 (266)
T 3oig_A 72 AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG 151 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence 76666654 7899999999754 1 2467788999999999999998753 22358999999765
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+..+ ..+++.++.+.. ..|+.+..++||.|
T Consensus 152 ~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG~v 194 (266)
T 3oig_A 152 ELVM----------------------------PNYNVMGVAKASL--------DASVKYLAADLG-KENIRVNSISAGPI 194 (266)
T ss_dssp TSCC----------------------------TTTHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECCC
T ss_pred cccC----------------------------CCcchhHHHHHHH--------HHHHHHHHHHHh-hcCcEEEEEecCcc
Confidence 4321 1111122112111 123444444433 34899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+.....+... ........ .. ....+...+++|++++.++..... ...++++++.++
T Consensus 195 ~T~~~~~~~~~~-------~~~~~~~~-~~--------~~~~~~~p~dva~~v~~l~s~~~~--~~tG~~i~vdGG 252 (266)
T 3oig_A 195 RTLSAKGISDFN-------SILKDIEE-RA--------PLRRTTTPEEVGDTAAFLFSDMSR--GITGENLHVDSG 252 (266)
T ss_dssp CSGGGTTCTTHH-------HHHHHHHH-HS--------TTSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccccccccchH-------HHHHHHHh-cC--------CCCCCCCHHHHHHHHHHHcCCchh--cCcCCEEEECCC
Confidence 764432221110 00000000 00 012357789999999988765332 234689999887
No 199
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.55 E-value=1.6e-13 Score=133.13 Aligned_cols=211 Identities=16% Similarity=0.142 Sum_probs=132.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||+|+||++++++|++.|. +|+++++.. +.+.+... ...++..+.+|++++ ++.+.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~~------~~~~~~~~~~Dv~~~------~~v~~~ 65 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD---KVCFIDIDE-KRSADFAK------ERPNLFYFHGDVADP------LTLKKF 65 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHT------TCTTEEEEECCTTSH------HHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHH------hcccCCeEEeeCCCH------HHHHHH
Confidence 57899999999999999999999886 455554331 22222221 124567899999987 776666
Q ss_pred hc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccceee
Q 042694 190 AK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 190 ~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~~i~ 253 (554)
.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... ++-.++|++||...+....
T Consensus 66 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 141 (247)
T 3dii_A 66 VEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP---- 141 (247)
T ss_dssp HHHHHHHHSCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCC----
Confidence 54 79999999997543 3567889999999999999998753 1235899999986643311
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS 333 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~ 333 (554)
....|...+... ..+++.++.+.. .++.+..+.||.|..+....+.
T Consensus 142 ------------------------~~~~Y~asKaa~--------~~~~~~la~e~~--~~i~vn~v~PG~v~t~~~~~~~ 187 (247)
T 3dii_A 142 ------------------------DSEAYASAKGGI--------VALTHALAMSLG--PDVLVNCIAPGWINVTEQQEFT 187 (247)
T ss_dssp ------------------------TCHHHHHHHHHH--------HHHHHHHHHHHT--TTSEEEEEEECSBCCCC---CC
T ss_pred ------------------------CcHHHHHHHHHH--------HHHHHHHHHHHC--CCcEEEEEEeCccCCcchhhHH
Confidence 111121111111 123334433332 2388999999988543221111
Q ss_pred ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 334 GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .. . ... + ...+..++|++++++.++.... -.++++++.++
T Consensus 188 ~---------~~----~-~~~------p--~~r~~~p~dva~~v~~l~~~~~----itG~~i~vdGG 228 (247)
T 3dii_A 188 Q---------ED----C-AAI------P--AGKVGTPKDISNMVLFLCQQDF----ITGETIIVDGG 228 (247)
T ss_dssp H---------HH----H-HTS------T--TSSCBCHHHHHHHHHHHHTCSS----CCSCEEEESTT
T ss_pred H---------HH----H-hcC------C--CCCCcCHHHHHHHHHHHHcCCC----CCCcEEEECCC
Confidence 0 00 0 000 1 1235678999999988873322 34689998776
No 200
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.55 E-value=7.1e-14 Score=136.91 Aligned_cols=220 Identities=13% Similarity=0.121 Sum_probs=140.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++.. +++.+.... ...++.++.+|++++ ++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~D~~~~------~~v~ 68 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREE-RLLAEAVAA-----LEAEAIAVVADVSDP------KAVE 68 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHHT-----CCSSEEEEECCTTSH------HHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----hcCceEEEEcCCCCH------HHHH
Confidence 4678999999999999999999999876 455554321 222221111 124788999999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccccee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i 252 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... ++..++|++||...+ ...+
T Consensus 69 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~-- 145 (263)
T 2a4k_A 69 AVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG-- 145 (263)
T ss_dssp HHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH--
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC--
Confidence 6654 57999999997542 3457788999999999999999763 123589999998765 2100
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF 332 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~ 332 (554)
...|..+|... ..+++.++.+.. ..|+++.++|||.|.++.....
T Consensus 146 --------------------------------~~~Y~asK~a~--~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~ 190 (263)
T 2a4k_A 146 --------------------------------LAHYAAGKLGV--VGLARTLALELA-RKGVRVNVLLPGLIQTPMTAGL 190 (263)
T ss_dssp --------------------------------HHHHHHCSSHH--HHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGTTS
T ss_pred --------------------------------cHHHHHHHHHH--HHHHHHHHHHhh-hhCcEEEEEEeCcCcCchhhhc
Confidence 12233332110 134455544433 3489999999999976543211
Q ss_pred cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 333 SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 333 ~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+. ....... ... + ...+...+|+|++++.++..... ...++++++.++
T Consensus 191 ~~---------~~~~~~~-~~~------p--~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdgG 238 (263)
T 2a4k_A 191 PP---------WAWEQEV-GAS------P--LGRAGRPEEVAQAALFLLSEESA--YITGQALYVDGG 238 (263)
T ss_dssp CH---------HHHHHHH-HTS------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CH---------HHHHHHH-hcC------C--CCCCcCHHHHHHHHHHHhCcccc--CCcCCEEEECCC
Confidence 10 0000000 000 1 12367889999999988764321 234678998877
No 201
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.55 E-value=1.7e-13 Score=131.69 Aligned_cols=198 Identities=14% Similarity=0.124 Sum_probs=127.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++|+|+||||+|+||++++++|++.|.+ |++.++. ..+.+.+... .....++.++.+|++++ ++.
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~------~~v 67 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA---LALGARSVDRLEKIAHELM----QEQGVEVFYHHLDVSKA------ESV 67 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHH----HHHCCCEEEEECCTTCH------HHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHH----hhcCCeEEEEEeccCCH------HHH
Confidence 4789999999999999999999998864 5544432 2222222211 11245889999999998 777
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~ 250 (554)
+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+-.++|.+||.......
T Consensus 68 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-- 145 (235)
T 3l77_A 68 EEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI-- 145 (235)
T ss_dssp HHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC--
T ss_pred HHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC--
Confidence 77765 78999999997542 3567889999999999999998642 123467777765432211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhh-hhcCCCcEEEEccceeeeccc
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLG-LERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~-~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+.. .. |..+|...+.+.+.+ .+..++.+..++||.|-.+..
T Consensus 146 --------------------------~~~------~~------Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~ 187 (235)
T 3l77_A 146 --------------------------PYG------GG------YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFG 187 (235)
T ss_dssp --------------------------TTC------HH------HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTT
T ss_pred --------------------------CCc------ch------HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccc
Confidence 000 11 222233333333332 234689999999998854222
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhc
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHG 385 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~ 385 (554)
...+. ......++..+++|++++.++....
T Consensus 188 ~~~~~--------------------------~~~~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 188 GSKPG--------------------------KPKEKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp TCCSC--------------------------CCGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred cccCC--------------------------cccccCCCCHHHHHHHHHHHHcCCC
Confidence 11100 0001246788999999998886643
No 202
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.55 E-value=2.5e-13 Score=132.80 Aligned_cols=214 Identities=10% Similarity=0.042 Sum_probs=129.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||+++++.|++.|.+ |+++++..- .+.+... ..++.++.+|++++ ++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~-~~~~~~~-------~~~~~~~~~Dv~~~------~~v~ 87 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEH-ASVTELR-------QAGAVALYGDFSCE------TGIM 87 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCC-HHHHHHH-------HHTCEEEECCTTSH------HHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChH-HHHHHHH-------hcCCeEEECCCCCH------HHHH
Confidence 56899999999999999999999998875 444432211 1111110 11367899999987 7666
Q ss_pred HHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccce
Q 042694 188 VIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~ 251 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+....
T Consensus 88 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-- 165 (260)
T 3gem_A 88 AFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS-- 165 (260)
T ss_dssp HHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS--
T ss_pred HHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--
Confidence 6654 69999999996532 2456789999999999999988542 2446899999976543211
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP 331 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p 331 (554)
....|...+..+ ..+++.++.+... ++.+..++||.|..+...
T Consensus 166 --------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~--~Irvn~v~PG~v~t~~~~- 208 (260)
T 3gem_A 166 --------------------------KHIAYCATKAGL--------ESLTLSFAARFAP--LVKVNGIAPALLMFQPKD- 208 (260)
T ss_dssp --------------------------SCHHHHHHHHHH--------HHHHHHHHHHHTT--TCEEEEEEECTTCC-----
T ss_pred --------------------------CcHhHHHHHHHH--------HHHHHHHHHHHCC--CCEEEEEeecccccCCCC-
Confidence 111122111111 1234444433322 599999999998653221
Q ss_pred ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 332 FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 332 ~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+.+... ..... + ..-+..++|+|++++.++.... -.++++++.++
T Consensus 209 ~~~~~~~--------------~~~~~---p--~~r~~~~edva~~v~~L~~~~~----itG~~i~vdGG 254 (260)
T 3gem_A 209 DAAYRAN--------------ALAKS---A--LGIEPGAEVIYQSLRYLLDSTY----VTGTTLTVNGG 254 (260)
T ss_dssp -------------------------C---C--SCCCCCTHHHHHHHHHHHHCSS----CCSCEEEESTT
T ss_pred CHHHHHH--------------HHhcC---C--CCCCCCHHHHHHHHHHHhhCCC----CCCCEEEECCC
Confidence 0111100 00000 0 1124457999999988874322 34689999887
No 203
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.54 E-value=1.2e-13 Score=134.72 Aligned_cols=224 Identities=16% Similarity=0.177 Sum_probs=140.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|. +|++.++. ..+.+.+.. ..++..+.+|++++ ++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~------~~ 68 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNESNIARIREEF--------GPRVHALRSDIADL------NE 68 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH--------GGGEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------CCcceEEEccCCCH------HH
Confidence 5789999999999999999999999886 45555432 223333222 34788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...+...
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 146 (255)
T 4eso_A 69 IAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-- 146 (255)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC--
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC--
Confidence 665543 79999999997642 3567889999999999999998753 223489999997654321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+....|...+... ..+++.++.+... .|+++..++||.|..+...
T Consensus 147 --------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~vn~v~PG~v~T~~~~ 191 (255)
T 4eso_A 147 --------------------------PGMSVYSASKAAL--------VSFASVLAAELLP-RGIRVNSVSPGFIDTPTKG 191 (255)
T ss_dssp --------------------------TTBHHHHHHHHHH--------HHHHHHHHHHTGG-GTCEEEEEEECSBCCSSTT
T ss_pred --------------------------CCchHHHHHHHHH--------HHHHHHHHHHHhh-hCcEEEEEecCcccCcccc
Confidence 1111122111111 1244444444433 4899999999999765332
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. ++.+. ............ .-...+...+|+|++++.++.. . .-..++++++.++
T Consensus 192 ~~-~~~~~---~~~~~~~~~~~~--------~p~~r~~~pedvA~~v~~L~s~-~--~~itG~~i~vdGG 246 (255)
T 4eso_A 192 VA-GITEA---ERAEFKTLGDNI--------TPMKRNGTADEVARAVLFLAFE-A--TFTTGAKLAVDGG 246 (255)
T ss_dssp CT-TSCHH---HHHHHHHHHHHH--------STTSSCBCHHHHHHHHHHHHHT-C--TTCCSCEEEESTT
T ss_pred cc-cCChh---hHHHHHHHHhcc--------CCCCCCcCHHHHHHHHHHHcCc-C--cCccCCEEEECCC
Confidence 10 00000 000000000000 0112456789999999887764 2 2234689999887
No 204
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.54 E-value=4e-14 Score=139.07 Aligned_cols=233 Identities=15% Similarity=0.106 Sum_probs=142.1
Q ss_pred hhccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 106 KFLKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 106 ~~~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
..+++|+|+||||+ |+||++++++|++.|. +|+++++ ...+.+.+... ...++.++.+|++++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~---- 76 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDRFKDRITEFAA------EFGSELVFPCDVADD---- 76 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHHHH------HTTCCCEEECCTTCH----
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC---CEEEEecchhhHHHHHHHHH------HcCCcEEEECCCCCH----
Confidence 34688999999999 9999999999999886 4554432 22222322211 123477899999987
Q ss_pred CHHHHHHHhc-------CccEEEEcCCCCCc------------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEee
Q 042694 182 EEDLADVIAK-------EVDVIVNSAANTTF------------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVST 241 (554)
Q Consensus 182 s~~~~~~l~~-------~vdiViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST 241 (554)
++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||
T Consensus 77 --~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 77 --AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp --HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 77776664 68999999997532 3467889999999999999998752 12348999999
Q ss_pred ceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcc
Q 042694 242 AYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRP 321 (554)
Q Consensus 242 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp 321 (554)
....... +....|...+..+ ..+++.++.+.. ..|+.+.+++|
T Consensus 155 ~~~~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~P 197 (271)
T 3ek2_A 155 LGAERAI----------------------------PNYNTMGLAKAAL--------EASVRYLAVSLG-AKGVRVNAISA 197 (271)
T ss_dssp GGGTSBC----------------------------TTTTHHHHHHHHH--------HHHHHHHHHHHH-TTTCEEEEEEE
T ss_pred cccccCC----------------------------CCccchhHHHHHH--------HHHHHHHHHHHH-hcCcEEEEEec
Confidence 7654321 1111222222211 123344443332 35899999999
Q ss_pred ceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCC
Q 042694 322 SVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSV 401 (554)
Q Consensus 322 ~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~ 401 (554)
|.|..+........ ......... . .....+..++++|++++.++..... ...++++++.++
T Consensus 198 G~v~T~~~~~~~~~-------~~~~~~~~~-~--------~~~~~~~~pedva~~i~~l~s~~~~--~~tG~~i~vdgG- 258 (271)
T 3ek2_A 198 GPIKTLAASGIKSF-------GKILDFVES-N--------SPLKRNVTIEQVGNAGAFLLSDLAS--GVTAEVMHVDSG- 258 (271)
T ss_dssp CCC-----CCCHHH-------HHHHHHHHH-H--------STTSSCCCHHHHHHHHHHHHSGGGT--TCCSEEEEESTT-
T ss_pred Ccccchhhhcccch-------HHHHHHHHh-c--------CCcCCCCCHHHHHHHHHHHcCcccC--CeeeeEEEECCC-
Confidence 99976433221110 000000000 0 0012356789999999988765322 234789999988
Q ss_pred CCcccHHHH
Q 042694 402 VNPLVFQDL 410 (554)
Q Consensus 402 ~~~it~~e~ 410 (554)
..++..++
T Consensus 259 -~~~~~~~~ 266 (271)
T 3ek2_A 259 -FNAVVGGM 266 (271)
T ss_dssp -GGGBCCCC
T ss_pred -eeeehhhh
Confidence 45554443
No 205
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.54 E-value=1.8e-13 Score=132.56 Aligned_cols=218 Identities=15% Similarity=0.104 Sum_probs=135.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|+||||||+||++++++|++.|. +|+++++.. +++.+.... . .+.++.+|++++ ++.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~--~~~~~~~D~~~~------~~~~ 65 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE-GPLREAAEA-----V--GAHPVVMDVADP------ASVE 65 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHHHHHT-----T--TCEEEECCTTCH------HHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----c--CCEEEEecCCCH------HHHH
Confidence 3578999999999999999999999886 455554321 222222111 1 267899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||...++..
T Consensus 66 ~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-- 143 (245)
T 1uls_A 66 RGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-- 143 (245)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC--
Confidence 6554 58999999997542 3467889999999999999988652 245799999998622210
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
....|...+... ..+++.++.+... .|+++.+++||.|..+...
T Consensus 144 ---------------------------~~~~Y~asK~a~--------~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~ 187 (245)
T 1uls_A 144 ---------------------------GQANYAASMAGV--------VGLTRTLALELGR-WGIRVNTLAPGFIETRMTA 187 (245)
T ss_dssp ---------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCTTTS
T ss_pred ---------------------------CchhHHHHHHHH--------HHHHHHHHHHHhH-hCeEEEEEEeCcCcCcchh
Confidence 001121111111 1244555544433 4899999999998654321
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+. .... ...... + .-.++..+|+|++++.++..... ...++++++.++
T Consensus 188 ~~~~---------~~~~----~~~~~~---p--~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdgG 237 (245)
T 1uls_A 188 KVPE---------KVRE----KAIAAT---P--LGRAGKPLEVAYAALFLLSDESS--FITGQVLFVDGG 237 (245)
T ss_dssp SSCH---------HHHH----HHHHTC---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hcCH---------HHHH----HHHhhC---C--CCCCcCHHHHHHHHHHHhCchhc--CCcCCEEEECCC
Confidence 1100 0000 000000 1 01367889999999888764321 234678888776
No 206
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.54 E-value=9.7e-14 Score=136.06 Aligned_cols=220 Identities=16% Similarity=0.115 Sum_probs=135.3
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcchh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAEL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lG 180 (554)
+++|+|+||||+ |+||++++++|++.|. +|+++++.. .+.+.+.. .+..++.+|++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~l~~~~---------~~~~~~~~D~~~~--- 71 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDKLKGRVEEFAAQL---------GSDIVLQCDVAED--- 71 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTTTHHHHHHHHHHT---------TCCCEEECCTTCH---
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEcCcHHHHHHHHHHHHhc---------CCcEEEEccCCCH---
Confidence 467899999999 9999999999999876 455554321 12222211 1236789999987
Q ss_pred CCHHHHHHHhc-------CccEEEEcCCCCCc------------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEe
Q 042694 181 LEEDLADVIAK-------EVDVIVNSAANTTF------------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVS 240 (554)
Q Consensus 181 Ls~~~~~~l~~-------~vdiViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vS 240 (554)
++.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+-.++|++|
T Consensus 72 ---~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 72 ---ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp ---HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 77666654 68999999997541 2457789999999999999999753 1124899999
Q ss_pred eceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEc
Q 042694 241 TAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIR 320 (554)
Q Consensus 241 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~R 320 (554)
|...+... +....|...+.... .+++.++.+.. ..|+++.++|
T Consensus 149 S~~~~~~~----------------------------~~~~~Y~~sK~a~~--------~~~~~la~e~~-~~gi~v~~v~ 191 (265)
T 1qsg_A 149 YLGAERAI----------------------------PNYNVMGLAKASLE--------ANVRYMANAMG-PEGVRVNAIS 191 (265)
T ss_dssp CGGGTSBC----------------------------TTTTHHHHHHHHHH--------HHHHHHHHHHT-TTTEEEEEEE
T ss_pred chhhccCC----------------------------CCchHHHHHHHHHH--------HHHHHHHHHhh-hcCeEEEEEE
Confidence 97554321 11111222221111 23333333322 3489999999
Q ss_pred cceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 321 PSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 321 p~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
||.|.++.....+.. ......+..+ . + ...+..++|+|++++.++..... ...++++++.++
T Consensus 192 PG~v~t~~~~~~~~~-------~~~~~~~~~~-~------p--~~~~~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG 253 (265)
T 1qsg_A 192 AGPIRTLAASGIKDF-------RKMLAHCEAV-T------P--IRRTVTIEDVGNSAAFLCSDLSA--GISGEVVHVDGG 253 (265)
T ss_dssp ECCCCCTTGGGSTTH-------HHHHHHHHHH-S------T--TSSCCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred eCCCccchhhccccc-------HHHHHHHHhc-C------C--CCCCCCHHHHHHHHHHHhCchhc--CccCCEEEECCC
Confidence 999977543211100 0000000000 0 0 12367889999999887754321 224679999887
No 207
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=2.7e-13 Score=131.98 Aligned_cols=226 Identities=14% Similarity=0.145 Sum_probs=135.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+++||||+|+||++++++|++.+..+ +|++.++. ..+.+.+.. ..++.++.+|++++ ++.+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~------~~v~ 66 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKY--------GDRFFYVVGDITED------SVLK 66 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHH--------GGGEEEEESCTTSH------HHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHh--------CCceEEEECCCCCH------HHHH
Confidence 5899999999999999999999987555 56655432 223333222 34788999999988 7766
Q ss_pred HHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+ .++|++||.......
T Consensus 67 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~- 144 (254)
T 3kzv_A 67 QLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF- 144 (254)
T ss_dssp HHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS-
T ss_pred HHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC-
Confidence 6654 79999999997432 3567889999999999999988321 13 699999997654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+ ..++.+..++||.|..+..
T Consensus 145 ---------------------------~~~~~Y~asK~a~--------~~~~~~la~e---~~~i~vn~v~PG~v~t~~~ 186 (254)
T 3kzv_A 145 ---------------------------SSWGAYGSSKAAL--------NHFAMTLANE---ERQVKAIAVAPGIVDTDMQ 186 (254)
T ss_dssp ---------------------------CCSHHHHHHHHHH--------HHHHHHHHHH---CTTSEEEEEECSSCCCCCS
T ss_pred ---------------------------CCcchHHHHHHHH--------HHHHHHHHhh---ccCcEEEEEeCCcccchhH
Confidence 1111121111111 1233333333 2589999999999976543
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...................+.. .. ....+...++++++++.++..... .--.++++++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~r~~~p~dva~~v~~L~s~~~~-~~itG~~i~vdg~ 247 (254)
T 3kzv_A 187 VNIRENVGPSSMSAEQLKMFRG-LK--------ENNQLLDSSVPATVYAKLALHGIP-DGVNGQYLSYNDP 247 (254)
T ss_dssp CCCCCCCCTTTSCHHHHHHHHH-HH--------TTC----CHHHHHHHHHHHHHCCC-GGGTTCEEETTCG
T ss_pred HHhhcccCccccCHHHHHHHHH-HH--------hcCCcCCcccHHHHHHHHHhhccc-CCCCccEEEecCc
Confidence 3221111000000000000000 00 012467889999999988866420 1123578888765
No 208
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.54 E-value=9.4e-14 Score=134.71 Aligned_cols=222 Identities=12% Similarity=0.105 Sum_probs=139.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||++++++|++.|. +|++.+... +++.+.... ...++..+.+|++++ ++.+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~v~ 68 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA---TVIVSDINA-EGAKAAAAS-----IGKKARAIAADISDP------GSVK 68 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCH-HHHHHHHHH-----HCTTEEECCCCTTCH------HHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-----hCCceEEEEcCCCCH------HHHH
Confidence 5789999999999999999999999886 566655431 222221111 235788999999988 7776
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH----HcCCCceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK----QCNKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+. +.+...++|++||.......
T Consensus 69 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 147 (247)
T 3rwb_A 69 ALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT- 147 (247)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-
Confidence 6665 79999999997543 24678899999999999988853 22235799999997654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+..+ ..+++.++.+... .|+++..++||.|..+..
T Consensus 148 ---------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~vn~v~PG~v~t~~~ 191 (247)
T 3rwb_A 148 ---------------------------PNMAAYVAAKGGV--------IGFTRALATELGK-YNITANAVTPGLIESDGV 191 (247)
T ss_dssp ---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCHHH
T ss_pred ---------------------------CCchhhHHHHHHH--------HHHHHHHHHHhhh-cCeEEEEEeeCcCcCccc
Confidence 1111122112111 1344555444433 489999999999965432
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+... .... ..... ....+...+++++++..++..... --.++++++.++
T Consensus 192 ~~~~~~~-----~~~~----~~~~~--------~~~r~~~pedva~~v~~L~s~~~~--~itG~~i~vdGG 243 (247)
T 3rwb_A 192 KASPHNE-----AFGF----VEMLQ--------AMKGKGQPEHIADVVSFLASDDAR--WITGQTLNVDAG 243 (247)
T ss_dssp HTSGGGG-----GHHH----HHHHS--------SSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccChhH-----HHHH----Hhccc--------ccCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 1111000 0000 00000 012345689999999888765432 234688988776
No 209
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.54 E-value=3.1e-13 Score=131.19 Aligned_cols=217 Identities=13% Similarity=0.085 Sum_probs=130.5
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+|+||||||+||++++++|++.|. +|+++++.. +.+.+ ..++..+ +|+ .. +.+.
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~-~~~~~----------~~~~~~~-~D~-~~----~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE-ELLKR----------SGHRYVV-CDL-RK----DLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH-HHHHH----------TCSEEEE-CCT-TT----CHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH-HHHHh----------hCCeEEE-eeH-HH----HHHH
Confidence 447899999999999999999999999876 456655432 22211 1256667 999 22 1122
Q ss_pred HHHHhcCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceecccccceeec
Q 042694 186 ADVIAKEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
.-.-..++|+|||+||.... .+.++..+++|+.|+..+.+.+ ++ .+..++|++||..++....
T Consensus 75 ~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~----- 148 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE-KGWGRIVAITSFSVISPIE----- 148 (249)
T ss_dssp HHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCCT-----
T ss_pred HHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcchHhcCCCC-----
Confidence 22222389999999996543 3467889999999987765554 33 3567999999987654311
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccc
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSG 334 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g 334 (554)
....|...+... ..+++.++.+.. ..|+++.++|||.|.++....
T Consensus 149 -----------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~--- 193 (249)
T 1o5i_A 149 -----------------------NLYTSNSARMAL--------TGFLKTLSFEVA-PYGITVNCVAPGWTETERVKE--- 193 (249)
T ss_dssp -----------------------TBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHH---
T ss_pred -----------------------CCchHHHHHHHH--------HHHHHHHHHHhh-hcCeEEEEEeeCCCccCcccc---
Confidence 111111111111 123344444332 248999999999997753210
Q ss_pred cccCCCCccceee-eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 335 WMEGNRMMDPIIL-YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 335 ~~~~~~~~~~i~~-~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+.. .... .... ......++.++|+|++++.++..... ...+++|++.++
T Consensus 194 ~~~------~~~~~~~~~---------~~p~~~~~~~~dvA~~i~~l~s~~~~--~~tG~~~~vdgG 243 (249)
T 1o5i_A 194 LLS------EEKKKQVES---------QIPMRRMAKPEEIASVVAFLCSEKAS--YLTGQTIVVDGG 243 (249)
T ss_dssp HSC------HHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cch------hhHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCcccc--CCCCCEEEECCC
Confidence 000 0000 0000 00013477899999999888754321 234689998876
No 210
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.53 E-value=1.9e-13 Score=132.91 Aligned_cols=124 Identities=9% Similarity=0.030 Sum_probs=92.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|+++++ +..+.+.+.... ...++.++.+|++++ ++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 70 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF---TVFAGRRNGEKLAPLVAEIEA-----AGGRIVARSLDARNE------DE 70 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESSGGGGHHHHHHHHH-----TTCEEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEECcCCCH------HH
Confidence 4689999999999999999999999886 4555543 333333333211 235789999999988 77
Q ss_pred HHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||....
T Consensus 71 v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 146 (252)
T 3h7a_A 71 VTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL 146 (252)
T ss_dssp HHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred HHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHc
Confidence 776665 78999999997542 3467889999999999998887431 244689999997654
No 211
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.53 E-value=6.2e-14 Score=136.65 Aligned_cols=222 Identities=12% Similarity=0.064 Sum_probs=136.0
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc---chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN---AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~---~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..++|+||||||+|+||++++++|++.|. +|++.+ ........+... ....++.++.+|++++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~---~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~------ 75 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF---RVVAGCGPNSPRRVKWLEDQK-----ALGFDFYASEGNVGDW------ 75 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTE---EEEEEECTTCSSHHHHHHHHH-----HTTCCCEEEECCTTCH------
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCHHHHHHHHHHHH-----hcCCeeEEEecCCCCH------
Confidence 46789999999999999999999999875 444433 111222222111 1235788999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
++.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++|++||.....
T Consensus 76 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (256)
T 3ezl_A 76 DSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK 155 (256)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc
Confidence 66666654 78999999997542 3567889999999988887776431 2557899999975543
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. +....|...+... ..+++.++.+... .|+++.+++||.|..
T Consensus 156 ~~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~~-~gi~v~~v~PG~v~t 198 (256)
T 3ezl_A 156 GQ----------------------------FGQTNYSTAKAGI--------HGFTMSLAQEVAT-KGVTVNTVSPGYIGT 198 (256)
T ss_dssp SC----------------------------SCCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCC
T ss_pred CC----------------------------CCCcccHHHHHHH--------HHHHHHHHHHHHH-hCCEEEEEEECcccC
Confidence 21 1111121111111 1234444443333 489999999999865
Q ss_pred cccCCc-cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPF-SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~-~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+..... +.+.. ....+ .....+...+|+|++++.++..... ...++++++.++
T Consensus 199 ~~~~~~~~~~~~----------~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~--~~tG~~i~vdgG 252 (256)
T 3ezl_A 199 DMVKAIRPDVLE----------KIVAT---------IPVRRLGSPDEIGSIVAWLASEESG--FSTGADFSLNGG 252 (256)
T ss_dssp HHHHTSCHHHHH----------HHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccccccCHHHHH----------HHHhc---------CCCCCCcCHHHHHHHHHHHhCCccc--CCcCcEEEECCC
Confidence 432111 11100 00000 0113466789999999887754321 234689999876
No 212
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=2.1e-13 Score=133.16 Aligned_cols=222 Identities=13% Similarity=0.081 Sum_probs=134.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|. +|++. +. +..+...+.... ...++.++.+|++++ +
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~ 71 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA---NVVLTYNGAAEGAATAVAEIEK-----LGRSALAIKADLTNA------A 71 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSSCHHHHHHHHHHHT-----TTSCCEEEECCTTCH------H
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHHHHHHHHHHh-----cCCceEEEEcCCCCH------H
Confidence 5689999999999999999999999886 44544 32 222222222211 235788999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceec-cc
Q 042694 185 LADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVN-GQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~-~~ 247 (554)
+.+.+.+ ++|++||+||... + .+.++..+++|+.|+..+++.+... .+-.++|++||.... ..
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 151 (259)
T 3edm_A 72 EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG 151 (259)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC
Confidence 7666664 7999999998651 1 3467889999999999999999753 122389999998664 21
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+..+ ..+++.++.+.. .++.+..+.||.|..+
T Consensus 152 ~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~--~~I~vn~v~PG~v~T~ 193 (259)
T 3edm_A 152 G----------------------------PGALAYATSKGAV--------MTFTRGLAKEVG--PKIRVNAVCPGMISTT 193 (259)
T ss_dssp S----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHT--TTCEEEEEEECCBCC-
T ss_pred C----------------------------CCcHHHHHHHHHH--------HHHHHHHHHHHC--CCCEEEEEEECCCcCc
Confidence 1 1111121111111 123344443332 2399999999998654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....... . ........ . .....+..++|+|++++.++..... --.++++++.++
T Consensus 194 ~~~~~~~---~-----~~~~~~~~-~--------~p~~r~~~pedva~~v~~L~s~~~~--~itG~~i~vdGg 247 (259)
T 3edm_A 194 FHDTFTK---P-----EVRERVAG-A--------TSLKREGSSEDVAGLVAFLASDDAA--YVTGACYDINGG 247 (259)
T ss_dssp --------------------------------------CCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESBC
T ss_pred ccccccC---h-----HHHHHHHh-c--------CCCCCCcCHHHHHHHHHHHcCcccc--CccCCEEEECCC
Confidence 3221110 0 00000000 0 0113456789999999888765332 234689999887
No 213
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.53 E-value=1.9e-13 Score=134.06 Aligned_cols=225 Identities=14% Similarity=0.111 Sum_probs=139.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+... .....++.++.+|++++ ++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dv~~~------~~ 84 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA---RLVLSGRDVSELDAARRALG----EQFGTDVHTVAIDLAEP------DA 84 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHCCCEEEEECCTTST------TH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH----HhcCCcEEEEEecCCCH------HH
Confidence 5789999999999999999999999886 45555432 2222222211 11235789999999998 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... +.-.++|++||...+..
T Consensus 85 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (266)
T 4egf_A 85 PAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP 164 (266)
T ss_dssp HHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence 665554 79999999997542 3467889999999999999888542 12458999999866432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+... ..+++.++.+... .|+++..++||.|..+
T Consensus 165 ~~----------------------------~~~~Y~asK~a~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 165 LP----------------------------DHYAYCTSKAGL--------VMATKVLARELGP-HGIRANSVCPTVVLTE 207 (266)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEESCBCSH
T ss_pred CC----------------------------CChHHHHHHHHH--------HHHHHHHHHHHhh-hCeEEEEEEeCCCcCc
Confidence 11 111122111111 1234444444333 4899999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....... + ...... .. ...-...+..++|+|++++.++..... --.++++++.++
T Consensus 208 ~~~~~~~--~-----~~~~~~----~~-----~~~p~~r~~~p~dva~~v~~L~s~~~~--~itG~~i~vdGG 262 (266)
T 4egf_A 208 MGQRVWG--D-----EAKSAP----MI-----ARIPLGRFAVPHEVSDAVVWLASDAAS--MINGVDIPVDGG 262 (266)
T ss_dssp HHHHHTC--S-----HHHHHH----HH-----TTCTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhhcc--C-----hHHHHH----HH-----hcCCCCCCcCHHHHHHHHHHHhCchhc--CccCcEEEECCC
Confidence 3211000 0 000000 00 000012356789999999888765332 234689998876
No 214
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.53 E-value=2e-13 Score=138.04 Aligned_cols=228 Identities=13% Similarity=-0.005 Sum_probs=135.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-ch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCC------
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENN------ 178 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~------ 178 (554)
+++|+||||||+|+||+++++.|++.|. +|++++ +. ..+.+.+... .....++.++.+|++++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~---~Vv~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~d~~~~~~~~ 116 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAAEANALSATLN----ARRPNSAITVQADLSNVATAPVSG 116 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHH----HHSTTCEEEEECCCSSSCBCC---
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCCHHHHHHHHHHHH----hhcCCeEEEEEeeCCCchhccccc
Confidence 5689999999999999999999999886 455544 22 2222222211 012347889999999882
Q ss_pred -----CCCCHHHHHHHhc-------CccEEEEcCCCCCc---------------------hhhHHHHHHHhchHHHHHHH
Q 042694 179 -----LGLEEDLADVIAK-------EVDVIVNSAANTTF---------------------DERYDIAIDINTRGPCRLME 225 (554)
Q Consensus 179 -----lGLs~~~~~~l~~-------~vdiViH~AA~v~~---------------------~~~~~~~~~~Nv~gt~~ll~ 225 (554)
..-+.++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 196 (328)
T 2qhx_A 117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 196 (328)
T ss_dssp ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 0000005555543 79999999997532 45677889999999999999
Q ss_pred HHHHc---CC------CceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCC
Q 042694 226 FAKQC---NK------LKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFST 296 (554)
Q Consensus 226 la~~~---~~------~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~ 296 (554)
++... .+ ..++|++||...+... +....|...+..+
T Consensus 197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~----------------------------~~~~~Y~asKaal------- 241 (328)
T 2qhx_A 197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------------LGYTIYTMAKGAL------- 241 (328)
T ss_dssp HHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----------------------------TTCHHHHHHHHHH-------
T ss_pred HHHHHHHhcCCcCCCCCcEEEEECchhhccCC----------------------------CCcHHHHHHHHHH-------
Confidence 88642 13 5689999997654321 1111122111111
Q ss_pred chHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHH
Q 042694 297 DGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNA 376 (554)
Q Consensus 297 ~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~a 376 (554)
..+++.++.+.. ..|+.+.+++||.|..+. ...+.+.. . ... .. +-. .-+...+++|++
T Consensus 242 -~~l~~~la~el~-~~gIrvn~v~PG~v~T~~-~~~~~~~~------~----~~~-~~------p~~-~r~~~pedvA~~ 300 (328)
T 2qhx_A 242 -EGLTRSAALELA-PLQIRVNGVGPGLSVLVD-DMPPAVWE------G----HRS-KV------PLY-QRDSSAAEVSDV 300 (328)
T ss_dssp -HHHHHHHHHHHG-GGTEEEEEEEESSBSCCC-CSCHHHHH------H----HHT-TC------TTT-TSCBCHHHHHHH
T ss_pred -HHHHHHHHHHHh-hcCcEEEEEecCcccCCc-cccHHHHH------H----HHh-hC------CCC-CCCCCHHHHHHH
Confidence 123344443332 248999999999986543 11111000 0 000 00 000 035678999999
Q ss_pred HHHHHHHhcccCCCCCeEEEeeCC
Q 042694 377 TLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 377 ii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++.++..... ...+.++++.++
T Consensus 301 v~~l~s~~~~--~itG~~i~vdGG 322 (328)
T 2qhx_A 301 VIFLCSSKAK--YITGTCVKVDGG 322 (328)
T ss_dssp HHHHHSGGGT--TCCSCEEEESTT
T ss_pred HHHHhCcccc--CccCcEEEECCC
Confidence 9988754321 234678888776
No 215
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.53 E-value=8.9e-14 Score=136.30 Aligned_cols=116 Identities=20% Similarity=0.198 Sum_probs=89.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++..- ...++..+.+|++++ ++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--------------~~~~~~~~~~Dl~~~------~~v~ 62 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGS---KVIDLSIHDP--------------GEAKYDHIECDVTNP------DQVK 62 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSCC--------------CSCSSEEEECCTTCH------HHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEecCcc--------------cCCceEEEEecCCCH------HHHH
Confidence 4689999999999999999999999886 4555543210 024678899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+.
T Consensus 63 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 138 (264)
T 2dtx_A 63 ASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI 138 (264)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc
Confidence 6654 79999999997543 3468899999999999999988642 2457999999986643
No 216
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.52 E-value=1.6e-13 Score=135.69 Aligned_cols=223 Identities=15% Similarity=0.099 Sum_probs=139.0
Q ss_pred ccCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGF--LAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGF--lG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||||+ ||++++++|++.|. +|++++.. ..+.+.+... ...++.++.+|++++ +
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~l~~------~~~~~~~~~~Dl~~~------~ 88 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA---ELAFTYVGQFKDRVEKLCA------EFNPAAVLPCDVISD------Q 88 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC---EEEEEECTTCHHHHHHHHG------GGCCSEEEECCTTCH------H
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC---EEEEeeCchHHHHHHHHHH------hcCCceEEEeecCCH------H
Confidence 57899999999988 99999999999886 45554332 2222222211 123578899999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc------------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeece
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF------------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAY 243 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~ 243 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||..
T Consensus 89 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~ 168 (280)
T 3nrc_A 89 EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIG 168 (280)
T ss_dssp HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccc
Confidence 6666654 57999999997642 3467788999999999999998753 1346899999976
Q ss_pred ecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 244 VNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 244 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
..... +....|...+..+ ..+++.++.+... .|+.+..++||.
T Consensus 169 ~~~~~----------------------------~~~~~Y~asKaal--------~~~~~~la~e~~~-~gi~v~~v~PG~ 211 (280)
T 3nrc_A 169 AEKAM----------------------------PSYNTMGVAKASL--------EATVRYTALALGE-DGIKVNAVSAGP 211 (280)
T ss_dssp GTSCC----------------------------TTTHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECC
T ss_pred cccCC----------------------------CCchhhHHHHHHH--------HHHHHHHHHHHHH-cCcEEEEEeecc
Confidence 54321 1111122112111 1234444443332 489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+........ ......... .. ....+..++++|++++.++..... .-.++++++.++
T Consensus 212 v~T~~~~~~~~~-------~~~~~~~~~-~~--------p~~~~~~pedvA~~v~~l~s~~~~--~~tG~~i~vdgG 270 (280)
T 3nrc_A 212 IKTLAASGISNF-------KKMLDYNAM-VS--------PLKKNVDIMEVGNTVAFLCSDMAT--GITGEVVHVDAG 270 (280)
T ss_dssp CCCSGGGGCTTH-------HHHHHHHHH-HS--------TTCSCCCHHHHHHHHHHTTSGGGT--TCCSCEEEESTT
T ss_pred ccchhhhcCcch-------HHHHHHHHh-cC--------CCCCCCCHHHHHHHHHHHhCcccC--CcCCcEEEECCC
Confidence 976433211110 000000000 00 012366789999999887764321 234689999877
No 217
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.52 E-value=5.2e-14 Score=138.96 Aligned_cols=227 Identities=13% Similarity=0.100 Sum_probs=139.2
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|+||||+|+||++++++|++.|. +|++.++. ..+...+... .....++.++.+|++++ +
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~------~ 90 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC---HTVIASRSLPRVLTAARKLA----GATGRRCLPLSMDVRAP------P 90 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCHHHHHHHHHHHH----HHHSSCEEEEECCTTCH------H
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH----HhcCCcEEEEEcCCCCH------H
Confidence 36789999999999999999999999876 45555432 1122221110 11235789999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++|++||......
T Consensus 91 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (277)
T 4fc7_A 91 AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG 170 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC
Confidence 6666654 79999999996432 3568899999999999999988531 23468999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+..+ ..+++.++.+... .|+++..++||.|.++
T Consensus 171 ~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 171 QA----------------------------LQVHAGSAKAAV--------DAMTRHLAVEWGP-QNIRVNSLAPGPISGT 213 (277)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECCBSSS
T ss_pred CC----------------------------CcHHHHHHHHHH--------HHHHHHHHHHhhh-cCeEEEEEEECCEecc
Confidence 11 111111111111 1234444443333 4899999999999764
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... .... ........ ... ..-...+...+|+|++++.++..... --.++++++.++
T Consensus 214 ~~~---~~~~---~~~~~~~~----~~~-----~~p~~r~~~p~dvA~~v~fL~s~~~~--~itG~~i~vdGG 269 (277)
T 4fc7_A 214 EGL---RRLG---GPQASLST----KVT-----ASPLQRLGNKTEIAHSVLYLASPLAS--YVTGAVLVADGG 269 (277)
T ss_dssp HHH---HHHS---CCHHHHHH----HHH-----TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhh---hhcc---CCHHHHHH----Hhc-----cCCCCCCcCHHHHHHHHHHHcCCccC--CcCCCEEEECCC
Confidence 210 0000 00000000 000 00112356789999999988764331 234689999887
No 218
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.52 E-value=3.3e-13 Score=134.32 Aligned_cols=223 Identities=14% Similarity=0.097 Sum_probs=139.3
Q ss_pred ccCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGF--LAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGF--lG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||+|+ ||+++++.|++.|.+ |++.++. ..+.+.+... ...++.++.+|++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dv~d~------ 93 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAE---LAFTYQGDALKKRVEPLAE------ELGAFVAGHCDVADA------ 93 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCE---EEEEECSHHHHHHHHHHHH------HHTCEEEEECCTTCH------
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHHHHHHHHHHHH------hcCCceEEECCCCCH------
Confidence 67899999999999 999999999998864 5544332 1122222111 123678999999988
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...
T Consensus 94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 94 ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 77766654 79999999997641 3567889999999999999998753 23458999999765
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+..+ ..+++.++.+... .|+.+..++||.|
T Consensus 174 ~~~~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v 216 (293)
T 3grk_A 174 EKVM----------------------------PNYNVMGVAKAAL--------EASVKYLAVDLGP-QNIRVNAISAGPI 216 (293)
T ss_dssp TSBC----------------------------TTTTHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECCC
T ss_pred ccCC----------------------------CchHHHHHHHHHH--------HHHHHHHHHHHhH-hCCEEEEEecCCC
Confidence 4321 1111222222211 1244444444333 4899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+........ ......... .. + ...+...+|+|++++.++..... ...++++++.++
T Consensus 217 ~T~~~~~~~~~-------~~~~~~~~~-~~------p--~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 274 (293)
T 3grk_A 217 KTLAASGIGDF-------RYILKWNEY-NA------P--LRRTVTIDEVGDVGLYFLSDLSR--SVTGEVHHADSG 274 (293)
T ss_dssp CC------CCH-------HHHHHHHHH-HS------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cchhhhcccch-------HHHHHHHHh-cC------C--CCCCCCHHHHHHHHHHHcCcccc--CCcceEEEECCC
Confidence 76433211110 000000000 00 0 12356789999999888765332 234689999887
No 219
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.52 E-value=7.7e-14 Score=137.21 Aligned_cols=233 Identities=13% Similarity=0.084 Sum_probs=139.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+++||||+|+||++++++|++.|.+ |++... ...+.+.+.... ...++.++.+|++++ +
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~ 81 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAK---VVVNYANSTKDAEKVVSEIKA-----LGSDAIAIKADIRQV------P 81 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------H
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------H
Confidence 67899999999999999999999998864 444322 222333322211 245789999999988 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||.......
T Consensus 82 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 160 (270)
T 3is3_A 82 EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS- 160 (270)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-
Confidence 7666654 78999999997643 3568899999999999999998763 223489999996521110
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
.+....|...+... ..+++.++.+.. ..|+.+..++||.|..+..
T Consensus 161 --------------------------~~~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~ 205 (270)
T 3is3_A 161 --------------------------VPKHSLYSGSKGAV--------DSFVRIFSKDCG-DKKITVNAVAPGGTVTDMF 205 (270)
T ss_dssp --------------------------CTTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECSBCSTTH
T ss_pred --------------------------CCCCchhHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEEeCCccChhh
Confidence 01111122112111 123444444333 3489999999999976432
Q ss_pred CCcc-ccccCC-CCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFS-GWMEGN-RMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~-g~~~~~-~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... .+.... .....-.. . .. ....-...+...+|+|++++.++..... --.++++++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~---~-~~----~~~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 268 (270)
T 3is3_A 206 HEVSHHYIPNGTSYTAEQRQ---Q-MA----AHASPLHRNGWPQDVANVVGFLVSKEGE--WVNGKVLTLDGG 268 (270)
T ss_dssp HHHGGGGSTTGGGSCHHHHH---H-HH----HHHSTTCSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred hhhhhhccccccccchHHHH---H-HH----HhcCCCCCCCCHHHHHHHHHHHcCCccC--CccCcEEEeCCC
Confidence 1100 000000 00000000 0 00 0000112356689999999888754331 234688888776
No 220
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.52 E-value=1.9e-13 Score=134.46 Aligned_cols=205 Identities=14% Similarity=0.088 Sum_probs=124.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.. ..++.++.+|++++ ++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~d~------~~ 88 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY---GVALAGRRLDALQETAAEI--------GDDALCVPTDVTDP------DS 88 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH--------TSCCEEEECCTTSH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHh--------CCCeEEEEecCCCH------HH
Confidence 4678999999999999999999999886 45555432 222222221 25788999999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CC--CceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NK--LKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~k~~v~vST~~v~ 245 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+ -.++|++||...+
T Consensus 89 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 168 (272)
T 4dyv_A 89 VRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT 168 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc
Confidence 776665 89999999997432 3467899999999998888877542 11 3589999997654
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
... +....|...+..+ ..+++.++.+.. ..|+.+..++||.|.
T Consensus 169 ~~~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~ 211 (272)
T 4dyv_A 169 SPR----------------------------PYSAPYTATKHAI--------TGLTKSTSLDGR-VHDIACGQIDIGNAD 211 (272)
T ss_dssp SCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEEEECC
T ss_pred CCC----------------------------CCchHHHHHHHHH--------HHHHHHHHHHhC-ccCEEEEEEEECccc
Confidence 321 1111122222111 123444444333 248999999999986
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhc
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHG 385 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~ 385 (554)
.+....... . ... . .... ....+..++|+|++++.++..+.
T Consensus 212 T~~~~~~~~---~---~~~----~-~~~~--------~~~~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 212 TPMAQKMKA---G---VPQ----A-DLSI--------KVEPVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHHSCT
T ss_pred Chhhhhhcc---c---chh----h-hhcc--------cccCCCCHHHHHHHHHHHhCCCC
Confidence 543221110 0 000 0 0000 01236789999999999887644
No 221
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.52 E-value=1.9e-13 Score=131.29 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=86.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+||||||+||++++++|++.|. +|+++++. ..+.+.+. ..++..+.+|++++ ++++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~------~~~~ 66 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY---RVGLMARDEKRLQALAAE---------LEGALPLPGDVREE------GDWA 66 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH---------STTCEEEECCTTCH------HHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHH---------hhhceEEEecCCCH------HHHH
Confidence 57899999999999999999999876 45555432 12222221 12678899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
.+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .+..++|++||...+.
T Consensus 67 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 142 (234)
T 2ehd_A 67 RAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN 142 (234)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC
Confidence 5553 78999999997542 346788999999999876665532 1 3568999999986543
No 222
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.52 E-value=1.8e-13 Score=137.80 Aligned_cols=237 Identities=12% Similarity=0.037 Sum_probs=140.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----------hHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
+++|+|+||||+|+||+++++.|++.|. +|++++.. ..+.+.+.... ......++.++.+|+++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d 118 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA---DIVAIDLCRQQPNLDYAQGSPEELKETVRL--VEEQGRRIIARQADVRD 118 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECCCCCTTCCSCCCCHHHHHHHHHH--HHHTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---eEEEEecccccccccccccCHHHHHHHHHH--HHhcCCeEEEEECCCCC
Confidence 5789999999999999999999999886 44544211 12222221110 01124578999999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEE
Q 042694 177 NNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQ 238 (554)
Q Consensus 177 ~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~ 238 (554)
+ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+... +.-.++|+
T Consensus 119 ~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~ 192 (317)
T 3oec_A 119 L------ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIF 192 (317)
T ss_dssp H------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred H------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 8 77666654 79999999997542 3578889999999999999988542 12357999
Q ss_pred EeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEE
Q 042694 239 VSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVI 318 (554)
Q Consensus 239 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I 318 (554)
+||...+.... ....|...+..+ ..+++.++.+... .|+++..
T Consensus 193 isS~~~~~~~~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~ 235 (317)
T 3oec_A 193 VSSTVGLRGAP----------------------------GQSHYAASKHGV--------QGLMLSLANEVGR-HNIRVNS 235 (317)
T ss_dssp ECCGGGSSCCT----------------------------TBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEE
T ss_pred ECcHHhcCCCC----------------------------CCcchHHHHHHH--------HHHHHHHHHHHhh-cCeEEEE
Confidence 99976543211 111122111111 1234444443332 4899999
Q ss_pred EccceeeecccCCc---cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEE
Q 042694 319 IRPSVIESTCKEPF---SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVY 395 (554)
Q Consensus 319 ~Rp~~V~g~~~~p~---~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vy 395 (554)
++||.|.++..... ..+..... .+..... ..... ........++.++|||++++.++..... --.++++
T Consensus 236 v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~---~~~~~p~~~~~pedvA~av~fL~s~~a~--~itG~~i 307 (317)
T 3oec_A 236 VNPGAVNTEMALNEKLLKMFLPHLE--NPTREDA-AELFS---QLTLLPIPWVEPEDVSNAVAWLASDEAR--YIHGAAI 307 (317)
T ss_dssp EEECSBSSHHHHCHHHHHHHCTTCS--SCCHHHH-HHHHT---TTCSSSSSSBCHHHHHHHHHHHTSGGGT--TCCSCEE
T ss_pred EecCcccCccccchhhhhhhhhhcc--ccchhHH-HHHHh---hhccCCCCCCCHHHHHHHHHHHcCCccc--CCCCCEE
Confidence 99999976432110 00000000 0000000 00000 0011114678899999999887754331 2346899
Q ss_pred EeeCC
Q 042694 396 QIASS 400 (554)
Q Consensus 396 n~~~~ 400 (554)
++.++
T Consensus 308 ~vdGG 312 (317)
T 3oec_A 308 PVDGG 312 (317)
T ss_dssp EESTT
T ss_pred EECcc
Confidence 99876
No 223
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.52 E-value=2.1e-13 Score=134.75 Aligned_cols=125 Identities=13% Similarity=0.131 Sum_probs=91.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+||||||||+||++++++|++.|. +|+++++. ..+.+.+.... .....++.++.+|++++ ++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~------~~ 97 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVGNIEELAAECKS---AGYPGTLIPYRCDLSNE------ED 97 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH---TTCSSEEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECChHHHHHHHHHHHh---cCCCceEEEEEecCCCH------HH
Confidence 5789999999999999999999999876 45555432 22222222110 00124688999999987 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchH----HHHHHHHHHHcCCC--ceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRG----PCRLMEFAKQCNKL--KLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~--k~~v~vST~~v~ 245 (554)
++.+++ ++|+|||+||.... .+.++..+++|+.| ++.+++.+++. +. .++|++||...+
T Consensus 98 v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~ 176 (279)
T 1xg5_A 98 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGH 176 (279)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGT
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhc
Confidence 666654 79999999996532 35678899999999 77777777763 44 799999998765
No 224
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.52 E-value=6.5e-13 Score=131.04 Aligned_cols=233 Identities=14% Similarity=0.082 Sum_probs=139.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch------------hHHHHHHHcCCchhhhccCcEEEEEccCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE------------LFKCLKQTYGKSYQAFMLSKLVPAVGNVC 175 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~------------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~ 175 (554)
+++|+++||||+|+||++++++|++.|. +|++++.. ..+.+.+.... ......++.++.+|++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~ 83 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA---DIIAVDIAGKLPSCVPYDPASPDDLSETVRL--VEAANRRIVAAVVDTR 83 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHHH--HHHTTCCEEEEECCTT
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeccccccccccccccCHHHHHHHHHH--HHhcCCeEEEEECCCC
Confidence 5789999999999999999999999886 45554320 12222221110 0112457899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEE
Q 042694 176 ENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFV 237 (554)
Q Consensus 176 ~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v 237 (554)
++ ++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... ++-.++|
T Consensus 84 ~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv 157 (277)
T 3tsc_A 84 DF------DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSII 157 (277)
T ss_dssp CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 87 66666654 69999999997543 3467889999999999999887542 1245899
Q ss_pred EEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEE
Q 042694 238 QVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVV 317 (554)
Q Consensus 238 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~ 317 (554)
++||...+.... ....|...+..+ ..+++.++.+.. ..|+.+.
T Consensus 158 ~isS~~~~~~~~----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~vn 200 (277)
T 3tsc_A 158 LISSAAGMKMQP----------------------------FMIHYTASKHAV--------TGLARAFAAELG-KHSIRVN 200 (277)
T ss_dssp EECCGGGTSCCS----------------------------SCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEE
T ss_pred EEccHhhCCCCC----------------------------CchhhHHHHHHH--------HHHHHHHHHHhC-ccCeEEE
Confidence 999986543211 111122112111 123444444433 2489999
Q ss_pred EEccceeeecccCCc--cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEE
Q 042694 318 IIRPSVIESTCKEPF--SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVY 395 (554)
Q Consensus 318 I~Rp~~V~g~~~~p~--~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vy 395 (554)
.++||.|..+..... ....... ...+-. ....... .+ .-+...+|+|++++.++..... .-.++++
T Consensus 201 ~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~---~p---~r~~~pedvA~~v~~L~s~~~~--~itG~~i 268 (277)
T 3tsc_A 201 SVHPGPVNTPMGSGDMVTAVGQAM-ETNPQL---SHVLTPF---LP---DWVAEPEDIADTVCWLASDESR--KVTAAQI 268 (277)
T ss_dssp EEEESSBSSGGGSHHHHHHHHHHH-HTCGGG---TTTTCCS---SS---CSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEeCCCcCCcccchhhhhhhhcc-cccHHH---HHHhhhc---cC---CCCCCHHHHHHHHHHHhCcccc--CCcCCEE
Confidence 999999966432110 0000000 000000 0000000 01 1367899999999988765432 2346889
Q ss_pred EeeCC
Q 042694 396 QIASS 400 (554)
Q Consensus 396 n~~~~ 400 (554)
++.++
T Consensus 269 ~vdGG 273 (277)
T 3tsc_A 269 PVDQG 273 (277)
T ss_dssp EESTT
T ss_pred eeCCC
Confidence 88876
No 225
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.52 E-value=2e-13 Score=135.38 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=89.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|++++ +.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~------~~ 92 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKETLQKVVSHCL----ELGAASAHYIAGTMEDM------TF 92 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHTCSEEEEEECCTTCH------HH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHH----HhCCCceEEEeCCCCCH------HH
Confidence 5789999999999999999999999876 45555432 2222222211 01123688999999987 66
Q ss_pred HHHHhc-------CccEEEEcC-CCCCc------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSA-ANTTF------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~A-A~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~ 245 (554)
.+.+.+ ++|+|||+| +.... .+.++..+++|+.|+.++++.+... .+..++|++||...+
T Consensus 93 v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~ 168 (286)
T 1xu9_A 93 AEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK 168 (286)
T ss_dssp HHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccc
Confidence 665554 799999994 54321 3567888999999999999988642 123599999998654
No 226
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.52 E-value=2.7e-13 Score=132.34 Aligned_cols=123 Identities=15% Similarity=0.045 Sum_probs=91.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--h--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--L--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+|+|+||||||+||++++++|++.|. +|+++++. . .+.+.+.... ...++.++.+|++++ ++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 67 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF---DIAVADLPQQEEQAAETIKLIEA-----ADQKAVFVGLDVTDK------AN 67 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEECGGGHHHHHHHHHHHHT-----TTCCEEEEECCTTCH------HH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 68999999999999999999999886 45555432 1 2222222211 134788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCC-ceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKL-KLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+. .++|++||...+.
T Consensus 68 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 146 (258)
T 3a28_C 68 FDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ 146 (258)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc
Confidence 666654 79999999997543 2467889999999999999988652 244 7999999986543
No 227
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.52 E-value=9.8e-14 Score=136.36 Aligned_cols=224 Identities=11% Similarity=0.095 Sum_probs=137.6
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+||||||+|+||++++++|++.|. +|++++...- . ....+..+.+|++++ ++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~-----~--------~~~~~~~~~~Dv~~~------~~ 67 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA---KVVSVSLDEK-----S--------DVNVSDHFKIDVTNE------EE 67 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCC---------------CTTSSEEEECCTTCH------HH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCch-----h--------ccCceeEEEecCCCH------HH
Confidence 447899999999999999999999999886 4555543210 0 122556789999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 68 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 147 (269)
T 3vtz_A 68 VKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT 147 (269)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC
Confidence 666654 79999999997543 2467788999999999999887541 245699999998765432
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+..+ ..+++.++.+.. .++.+..++||.|.++.
T Consensus 148 ~----------------------------~~~~Y~asKaa~--------~~l~~~la~e~~--~~i~vn~v~PG~v~T~~ 189 (269)
T 3vtz_A 148 K----------------------------NAAAYVTSKHAL--------LGLTRSVAIDYA--PKIRCNAVCPGTIMTPM 189 (269)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHT--TTEEEEEEEECSBCCHH
T ss_pred C----------------------------CChhHHHHHHHH--------HHHHHHHHHHhc--CCCEEEEEEECCCcCcc
Confidence 1 111111111111 123334433332 27999999999997643
Q ss_pred cCCcccccc--CCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWME--GNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~--~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
......... ...........+.. ..-...+..++|+|++++.++..... --.++++++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 252 (269)
T 3vtz_A 190 VIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEEVAEVVAFLASDRSS--FITGACLTVDGG 252 (269)
T ss_dssp HHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhhhccccccchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCCccC--CCcCcEEEECCC
Confidence 210000000 00000000000000 01113467899999999888765332 234689999887
No 228
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.51 E-value=2.9e-13 Score=131.59 Aligned_cols=215 Identities=10% Similarity=0.094 Sum_probs=133.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccC--CCCCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNV--CENNLGLE 182 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl--~~~~lGLs 182 (554)
.+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+... .....++.++.+|+ +++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~----- 76 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGA---TVILLGRNEEKLRQVASHIN----EETGRQPQWFILDLLTCTS----- 76 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHSCCCEEEECCTTTCCH-----
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH----hhcCCCceEEEEecccCCH-----
Confidence 46789999999999999999999999886 45555432 2222222211 11223678899999 665
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
++.+.+.+ .+|++||+||... + .+.++..+++|+.|+..+++.+... .+..++|++||...
T Consensus 77 -~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~ 155 (252)
T 3f1l_A 77 -ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG 155 (252)
T ss_dssp -HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred -HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh
Confidence 66665554 7999999999742 1 3467889999999999999988431 34579999999765
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+... ..+++.++.+.. ..+.+..+.||.|
T Consensus 156 ~~~~----------------------------~~~~~Y~asK~a~--------~~l~~~la~e~~--~~irvn~v~PG~v 197 (252)
T 3f1l_A 156 RQGR----------------------------ANWGAYAASKFAT--------EGMMQVLADEYQ--QRLRVNCINPGGT 197 (252)
T ss_dssp TSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTT--TTCEEEEEECCSB
T ss_pred ccCC----------------------------CCCchhHHHHHHH--------HHHHHHHHHHhc--CCcEEEEEecCcc
Confidence 3321 1111121111111 123344443332 2388888998887
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
-.+... .... ......+...+|++++++.++..... ...++++++.++
T Consensus 198 ~t~~~~---~~~~-----------------------~~~~~~~~~p~dva~~~~~L~s~~~~--~itG~~i~vdgG 245 (252)
T 3f1l_A 198 RTAMRA---SAFP-----------------------TEDPQKLKTPADIMPLYLWLMGDDSR--RKTGMTFDAQPG 245 (252)
T ss_dssp SSHHHH---HHCT-----------------------TCCGGGSBCTGGGHHHHHHHHSGGGT--TCCSCEEESSCC
T ss_pred cCchhh---hhCC-----------------------ccchhccCCHHHHHHHHHHHcCcccc--CCCCCEEEeCCC
Confidence 442110 0000 00012356778999999888765432 234689999887
No 229
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.51 E-value=2.4e-13 Score=133.38 Aligned_cols=223 Identities=16% Similarity=0.117 Sum_probs=134.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-c--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-N--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+++||||+|+||++++++|++.|.+ |++. + ....+.+.+.... ...++.++.+|++++ +
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~ 90 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT---VVINYAGKAAAAEEVAGKIEA-----AGGKALTAQADVSDP------A 90 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE---EEEEESSCSHHHHHHHHHHHH-----TTCCEEEEECCTTCH------H
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEcCCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCH------H
Confidence 46899999999999999999999999864 4443 2 2223333322211 235788999999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||.......
T Consensus 91 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 169 (267)
T 3u5t_A 91 AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH- 169 (267)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-
Confidence 7666654 79999999997542 2457888999999999999888652 223489999987553321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+..+ ..+++.++.+.. ..|+.+..+.||.|..+..
T Consensus 170 ---------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~ 213 (267)
T 3u5t_A 170 ---------------------------PSYGIYAAAKAGV--------EAMTHVLSKELR-GRDITVNAVAPGPTATDLF 213 (267)
T ss_dssp ---------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTT-TSCCEEEEEEECCBC----
T ss_pred ---------------------------CCchHHHHHHHHH--------HHHHHHHHHHhh-hhCCEEEEEEECCCcCccc
Confidence 1111121111111 123444443332 3489999999999855321
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. ... ......+. ...-...+..++|+|++++.++..... --.++++++.++
T Consensus 214 ~~---~~~-----~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 265 (267)
T 3u5t_A 214 LE---GKS-----DEVRDRFA---------KLAPLERLGTPQDIAGAVAFLAGPDGA--WVNGQVLRANGG 265 (267)
T ss_dssp ---------------CHHHHH---------TSSTTCSCBCHHHHHHHHHHHHSTTTT--TCCSEEEEESSS
T ss_pred cc---cCC-----HHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCcccc--CccCCEEEeCCC
Confidence 10 000 00000000 001112466789999999888754321 234688888765
No 230
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.51 E-value=1.8e-13 Score=133.12 Aligned_cols=224 Identities=13% Similarity=0.115 Sum_probs=137.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||+|+||++++++|++.|. +|+++ ++ ...+...+... ....++..+.+|++++ +
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~ 70 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRKEEAEETVYEIQ-----SNGGSAFSIGANLESL------H 70 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCSHHHHHHHHHHH-----HTTCEEEEEECCTTSH------H
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchHHHHHHHHHHH-----hcCCceEEEecCcCCH------H
Confidence 5689999999999999999999999886 44443 22 22222222211 1245788999999987 5
Q ss_pred HHHHHhc-------------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeece
Q 042694 185 LADVIAK-------------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAY 243 (554)
Q Consensus 185 ~~~~l~~-------------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~ 243 (554)
..+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~ 150 (255)
T 3icc_A 71 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 150 (255)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence 5555543 29999999997532 2467788999999999999998752 2235899999976
Q ss_pred ecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 244 VNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 244 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
..... +....|...+... ..+++.++.+... .|+.+..++||.
T Consensus 151 ~~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~v~~v~PG~ 193 (255)
T 3icc_A 151 TRISL----------------------------PDFIAYSMTKGAI--------NTMTFTLAKQLGA-RGITVNAILPGF 193 (255)
T ss_dssp GTSCC----------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECC
T ss_pred hccCC----------------------------CCcchhHHhHHHH--------HHHHHHHHHHHHh-cCeEEEEEEEee
Confidence 54321 1111121111111 1233444433332 489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+....... . +...... ........+..+++++++++.++..... -..++++++.++
T Consensus 194 v~t~~~~~~~~---~-----~~~~~~~--------~~~~~~~~~~~~~dva~~~~~l~s~~~~--~~tG~~i~vdgG 252 (255)
T 3icc_A 194 VKTDMNAELLS---D-----PMMKQYA--------TTISAFNRLGEVEDIADTAAFLASPDSR--WVTGQLIDVSGG 252 (255)
T ss_dssp BCCSSSTTTTT---S-----HHHHHHH--------HHTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred ecccchhhhcc---c-----HHHHHhh--------hccCCcCCCCCHHHHHHHHHHHhCcccC--CccCCEEEecCC
Confidence 96643322111 0 0000000 0011123467789999999887754321 234689998876
No 231
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.51 E-value=2.9e-13 Score=131.28 Aligned_cols=123 Identities=19% Similarity=0.172 Sum_probs=90.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||||+||++++++|++.|. +|+++++. ..+.+.++... ...++..+.+|++++ ++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~~~------~~ 70 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA---AVAIAARRVEKLRALGDELTA-----AGAKVHVLELDVADR------QG 70 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH------HH
Confidence 4689999999999999999999999886 45555432 22222222110 134788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+ .++|++||....
T Consensus 71 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~ 146 (247)
T 2jah_A 71 VDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGR 146 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhc
Confidence 666554 79999999997532 2467889999999999999988642 23 699999997654
No 232
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.51 E-value=2.3e-13 Score=133.52 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=136.3
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|++++ +
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~------~ 84 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLEEASEAAQKLT----EKYGVETMAFRCDVSNY------E 84 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHCCCEEEEECCTTCH------H
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH----HhcCCeEEEEEcCCCCH------H
Confidence 36789999999999999999999999886 45555432 1222221110 00134688899999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee-cc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV-NG 246 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v-~~ 246 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+.. + .+..++|++||..+ ..
T Consensus 85 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 164 (267)
T 1vl8_A 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV 164 (267)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc
Confidence 6666654 79999999997542 246788999999999999988753 1 24579999999763 11
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. +....|...+... ..+++.++.+.. ..|+++.+++||.|..
T Consensus 165 ~~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~T 207 (267)
T 1vl8_A 165 TM----------------------------PNISAYAASKGGV--------ASLTKALAKEWG-RYGIRVNVIAPGWYRT 207 (267)
T ss_dssp CS----------------------------SSCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECCBCS
T ss_pred CC----------------------------CCChhHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEEeccCcc
Confidence 10 1111111111111 123333333332 2489999999999865
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+... .+... ..... ...... + ...++..+++|++++.++..... ...++++++.++
T Consensus 208 ~~~~---~~~~~----~~~~~----~~~~~~---p--~~~~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG 263 (267)
T 1vl8_A 208 KMTE---AVFSD----PEKLD----YMLKRI---P--LGRTGVPEDLKGVAVFLASEEAK--YVTGQIIFVDGG 263 (267)
T ss_dssp TTTH---HHHTC----HHHHH----HHHHTC---T--TSSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cccc---ccccC----hHHHH----HHHhhC---C--CCCCcCHHHHHHHHHHHcCcccc--CCcCCeEEECCC
Confidence 3221 11100 00000 000000 1 12367889999999888765321 223678888776
No 233
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.50 E-value=1.6e-13 Score=134.66 Aligned_cols=220 Identities=14% Similarity=0.151 Sum_probs=134.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++.. . .......+.+|++++ +..+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~---------~-----~~~~~~~~~~Dv~~~------~~~~ 82 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGA---RVAVADRAV---------A-----GIAADLHLPGDLREA------AYAD 82 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECSSCC---------T-----TSCCSEECCCCTTSH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH---------H-----HHHhhhccCcCCCCH------HHHH
Confidence 5789999999999999999999999886 566655321 0 011224458899887 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 83 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-- 160 (266)
T 3uxy_A 83 GLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-- 160 (266)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC--
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC--
Confidence 5443 79999999998652 3567889999999999999998321 256799999997654321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+....|...+..+ ..+++.++.+... .|+.+.+++||.|.++...
T Consensus 161 --------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~T~~~~ 205 (266)
T 3uxy_A 161 --------------------------PGHALYCLTKAAL--------ASLTQCMGMDHAP-QGIRINAVCPNEVNTPMLR 205 (266)
T ss_dssp --------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEESSBCCHHHH
T ss_pred --------------------------CCChHHHHHHHHH--------HHHHHHHHHHhhh-cCcEEEEEeeCCCcchHhh
Confidence 1111122111111 1233444433332 4899999999999764321
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. +.............. ........+..++|+|++++.++..... --.++++++.++
T Consensus 206 ~~--~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG 262 (266)
T 3uxy_A 206 TG--FAKRGFDPDRAVAEL---------GRTVPLGRIAEPEDIADVVLFLASDAAR--YLCGSLVEVNGG 262 (266)
T ss_dssp HH--HHHTTCCHHHHHHHH---------HTTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hh--hhcccccchHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHhCchhc--CCcCCEEEECcC
Confidence 00 000000000000000 0111123567899999999988765432 234689999887
No 234
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.50 E-value=3.1e-13 Score=133.77 Aligned_cols=123 Identities=19% Similarity=0.138 Sum_probs=91.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+|+||||+|+||++++++|++.|. +|+++.+.. .+.+.+.... ...++.++.+|++++ +
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 92 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTESAEEVVAAIKK-----NGSDAACVKANVGVV------E 92 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTCH------H
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHHHHHHHHHHHH-----hCCCeEEEEcCCCCH------H
Confidence 5789999999999999999999999876 455543321 2222221110 234788999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
+.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...
T Consensus 93 ~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 167 (283)
T 1g0o_A 93 DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG 167 (283)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence 6555543 79999999997643 3578899999999999999999763 34579999999754
No 235
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.50 E-value=3.5e-13 Score=133.24 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=137.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+. ...++.++.+|++++ +.
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~---~Vi~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~------~~ 90 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL---GVVIADLAAEKGKALADE--------LGNRAEFVSTNVTSE------DS 90 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCTTEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHH--------hCCceEEEEcCCCCH------HH
Confidence 6789999999999999999999999886 45555432 22222222 235789999999987 76
Q ss_pred HHHHhc------CccEEEEcCCCCC-------------chhhHHHHHHHhchHHHHHHHHHHHc---------CCCceEE
Q 042694 186 ADVIAK------EVDVIVNSAANTT-------------FDERYDIAIDINTRGPCRLMEFAKQC---------NKLKLFV 237 (554)
Q Consensus 186 ~~~l~~------~vdiViH~AA~v~-------------~~~~~~~~~~~Nv~gt~~ll~la~~~---------~~~k~~v 237 (554)
.+.+++ .+|++||+||... -.+.++..+++|+.|+.++++++... .+-.++|
T Consensus 91 v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv 170 (281)
T 3ppi_A 91 VLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALV 170 (281)
T ss_dssp HHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEE
Confidence 666654 6899999955321 12357899999999999999988642 1335899
Q ss_pred EEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEE
Q 042694 238 QVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVV 317 (554)
Q Consensus 238 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~ 317 (554)
++||...+... +....|...+..+ ..+++.++.+... .|+.+.
T Consensus 171 ~isS~~~~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~gi~v~ 213 (281)
T 3ppi_A 171 LTASIAGYEGQ----------------------------IGQTAYAAAKAGV--------IGLTIAAARDLSS-AGIRVN 213 (281)
T ss_dssp EECCGGGTSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEE
T ss_pred EEecccccCCC----------------------------CCCcccHHHHHHH--------HHHHHHHHHHHhh-cCeEEE
Confidence 99998664321 1111122111111 1244445444433 489999
Q ss_pred EEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEe
Q 042694 318 IIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQI 397 (554)
Q Consensus 318 I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~ 397 (554)
.++||.|..+....... ........ .......+..++++|++++.++.... ..++++++
T Consensus 214 ~v~PG~v~T~~~~~~~~---------~~~~~~~~--------~~~~~~~~~~pedvA~~v~~l~s~~~----~tG~~i~v 272 (281)
T 3ppi_A 214 TIAPGTMKTPIMESVGE---------EALAKFAA--------NIPFPKRLGTPDEFADAAAFLLTNGY----INGEVMRL 272 (281)
T ss_dssp EEEECSBCCHHHHTTCH---------HHHHHHHH--------TCCSSSSCBCHHHHHHHHHHHHHCSS----CCSCEEEE
T ss_pred EEecCcCCchhhhcccH---------HHHHHHHh--------cCCCCCCCCCHHHHHHHHHHHHcCCC----cCCcEEEE
Confidence 99999986532211100 00000000 00011346789999999998886432 34689999
Q ss_pred eCC
Q 042694 398 ASS 400 (554)
Q Consensus 398 ~~~ 400 (554)
.++
T Consensus 273 dGG 275 (281)
T 3ppi_A 273 DGA 275 (281)
T ss_dssp STT
T ss_pred CCC
Confidence 877
No 236
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.50 E-value=2.7e-13 Score=132.65 Aligned_cols=125 Identities=13% Similarity=0.166 Sum_probs=91.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 70 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNREALEKAEASVRE-----KGVEARSYVCDVTSE------EA 70 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHT-----TTSCEEEEECCTTCH------HH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HH
Confidence 4689999999999999999999999886 45555432 22222222211 134688999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCC-C---c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANT-T---F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v-~---~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ ++|++||+||.. . + .+.++..+++|+.|+.++++.+... .+..++|++||...+.
T Consensus 71 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 149 (262)
T 1zem_A 71 VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK 149 (262)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc
Confidence 665554 799999999975 2 1 3467889999999999999988652 2456999999976543
No 237
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.50 E-value=4.9e-13 Score=132.72 Aligned_cols=221 Identities=17% Similarity=0.079 Sum_probs=135.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCC----CCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCE----NNLG 180 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~----~~lG 180 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|+++ +
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~~l~----~~~~~~~~~~~~Dv~~~~~~~--- 90 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY---RVVIHYHNSAEAAVSLADELN----KERSNTAVVCQADLTNSNVLP--- 90 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTC---EEEEEESSCHHHHHHHHHHHH----HHSTTCEEEEECCCSCSTTHH---
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEeCCchHHHHHHHHHHH----hhcCCceEEEEeecCCccCCH---
Confidence 5789999999999999999999999886 45555432 2222222211 0123578899999998 5
Q ss_pred CCHHHHHHHhc-------CccEEEEcCCCCC---c--------------hhhHHHHHHHhchHHHHHHHHHHHc-C--C-
Q 042694 181 LEEDLADVIAK-------EVDVIVNSAANTT---F--------------DERYDIAIDINTRGPCRLMEFAKQC-N--K- 232 (554)
Q Consensus 181 Ls~~~~~~l~~-------~vdiViH~AA~v~---~--------------~~~~~~~~~~Nv~gt~~ll~la~~~-~--~- 232 (554)
++.+.+.+ .+|++||+||... + .+.++..+++|+.|+..+++.+... . +
T Consensus 91 ---~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 167 (288)
T 2x9g_A 91 ---ASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP 167 (288)
T ss_dssp ---HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-----
T ss_pred ---HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence 55555544 7999999999643 1 2356788999999999999988653 1 1
Q ss_pred -----CceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhh
Q 042694 233 -----LKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGL 307 (554)
Q Consensus 233 -----~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~ 307 (554)
..++|++||...+... +....|...+..+ ..+++.++.+
T Consensus 168 ~~~~~~g~iv~isS~~~~~~~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e 211 (288)
T 2x9g_A 168 NCTSSNLSIVNLCDAMVDQPC----------------------------MAFSLYNMGKHAL--------VGLTQSAALE 211 (288)
T ss_dssp ---CCCEEEEEECCTTTTSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHH
T ss_pred CCCCCCeEEEEEecccccCCC----------------------------CCCchHHHHHHHH--------HHHHHHHHHH
Confidence 4589999997654321 1111121111111 1244444444
Q ss_pred hhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCccccc-chhhHHHHHHHHHHHHhcc
Q 042694 308 GLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDV-VPADMVVNATLAAIAQHGM 386 (554)
Q Consensus 308 ~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~-vpVD~va~aii~~~~~~~~ 386 (554)
... .|+.+.+++||.|.++. ...+... .. ..... +- ..+ ...+++|++++.++.....
T Consensus 212 ~~~-~gI~vn~v~PG~v~t~~-~~~~~~~------~~--------~~~~~---p~--~r~~~~pedvA~~v~~l~s~~~~ 270 (288)
T 2x9g_A 212 LAP-YGIRVNGVAPGVSLLPV-AMGEEEK------DK--------WRRKV---PL--GRREASAEQIADAVIFLVSGSAQ 270 (288)
T ss_dssp HGG-GTEEEEEEEESSCSCCT-TSCHHHH------HH--------HHHTC---TT--TSSCCCHHHHHHHHHHHHSGGGT
T ss_pred hhc-cCeEEEEEEeccccCcc-ccChHHH------HH--------HHhhC---CC--CCCCCCHHHHHHHHHHHhCcccc
Confidence 333 48999999999997654 1100000 00 00000 10 123 5789999999988764321
Q ss_pred cCCCCCeEEEeeCC
Q 042694 387 IQKPDINVYQIASS 400 (554)
Q Consensus 387 ~~~~~~~vyn~~~~ 400 (554)
...+.++++.++
T Consensus 271 --~itG~~i~vdGG 282 (288)
T 2x9g_A 271 --YITGSIIKVDGG 282 (288)
T ss_dssp --TCCSCEEEESTT
T ss_pred --CccCCEEEECcc
Confidence 234678888766
No 238
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.49 E-value=2.4e-13 Score=130.76 Aligned_cols=207 Identities=14% Similarity=0.166 Sum_probs=129.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+|+||||||+||++++++|++.|. +|+++++..- . .......+.+|++++ ++.+.
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~--------~-----~~~~~~~~~~D~~~~------~~~~~ 59 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSAN--------D-----QADSNILVDGNKNWT------EQEQS 59 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCC--------T-----TSSEEEECCTTSCHH------HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecCcc--------c-----cccccEEEeCCCCCH------HHHHH
Confidence 468999999999999999999999875 5555543210 0 112456788999987 66655
Q ss_pred Hhc---------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccc
Q 042694 189 IAK---------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 189 l~~---------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~ 250 (554)
+.+ ++|+|||+||... ..+.++..+++|+.|+.++++.+... .+-.++|++||...+...
T Consensus 60 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-- 137 (236)
T 1ooe_A 60 ILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-- 137 (236)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--
T ss_pred HHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC--
Confidence 543 7999999999643 13467889999999999999998763 122489999997654321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh-hcCCCcEEEEccceeeeccc
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL-ERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~-~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+.. ...|+.+.++|||.|.++..
T Consensus 138 --------------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 183 (236)
T 1ooe_A 138 --------------------------PSMIGYGMAKAAV--------HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 183 (236)
T ss_dssp --------------------------TTBHHHHHHHHHH--------HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH
T ss_pred --------------------------CCcHHHHHHHHHH--------HHHHHHHHHHhcccCCCeEEEEEecCcccCcch
Confidence 1111111111111 123333333322 14579999999999866421
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. ..... .....++|.+++|++++..+..... ....+.++++.++
T Consensus 184 ~---~~~~~-----------------------~~~~~~~~~~dvA~~i~~~l~s~~~-~~~~G~~~~v~gg 227 (236)
T 1ooe_A 184 R---KWMPN-----------------------ADHSSWTPLSFISEHLLKWTTETSS-RPSSGALLKITTE 227 (236)
T ss_dssp H---HHSTT-----------------------CCGGGCBCHHHHHHHHHHHHHCGGG-CCCTTCEEEEEEE
T ss_pred h---hcCCC-----------------------ccccccCCHHHHHHHHHHHHcCCCc-ccccccEEEEecC
Confidence 1 00000 0012357789999999855533222 1234678887765
No 239
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.49 E-value=6.2e-13 Score=132.71 Aligned_cols=237 Identities=16% Similarity=0.109 Sum_probs=141.8
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----------hHHHHHHHcCCchhhhccCcEEEEEccCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----------LFKCLKQTYGKSYQAFMLSKLVPAVGNVC 175 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~ 175 (554)
.+++|+++||||+|.||+++++.|++.|. +|++++.. ..+.+.+.... ......++.++.+|++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA---DIIAIDVCKQLDGVKLPMSTPDDLAETVRQ--VEALGRRIIASQVDVR 99 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCCSCCCCHHHHHHHHHH--HHHTTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecccccccccccccCHHHHHHHHHH--HHhcCCceEEEECCCC
Confidence 36789999999999999999999999886 45544321 01222221110 0112457899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceE
Q 042694 176 ENNLGLEEDLADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLF 236 (554)
Q Consensus 176 ~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 236 (554)
++ ++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... ++..++
T Consensus 100 ~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~I 173 (299)
T 3t7c_A 100 DF------DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSI 173 (299)
T ss_dssp CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 87 66666654 79999999996532 3467899999999999999987542 235689
Q ss_pred EEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcE
Q 042694 237 VQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPV 316 (554)
Q Consensus 237 v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~ 316 (554)
|++||....... +....|...+..+ ..+++.++.+... .|+.+
T Consensus 174 v~isS~~~~~~~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~v 216 (299)
T 3t7c_A 174 VFTSSIGGLRGA----------------------------ENIGNYIASKHGL--------HGLMRTMALELGP-RNIRV 216 (299)
T ss_dssp EEECCGGGTSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEE
T ss_pred EEECChhhccCC----------------------------CCcchHHHHHHHH--------HHHHHHHHHHhcc-cCcEE
Confidence 999997654321 1111122112111 1244444444333 48999
Q ss_pred EEEccceeeecccCCcccc--ccCCCCccceeeeec--cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCC
Q 042694 317 VIIRPSVIESTCKEPFSGW--MEGNRMMDPIILYYG--KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDI 392 (554)
Q Consensus 317 ~I~Rp~~V~g~~~~p~~g~--~~~~~~~~~i~~~~~--~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~ 392 (554)
..++||.|..+.....+.+ ... ....+...... ....... + ..+...+|+|++++.++..... --.+
T Consensus 217 n~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---p---~r~~~pedvA~~v~fL~s~~a~--~itG 287 (299)
T 3t7c_A 217 NIVCPSSVATPMLLNEPTYRMFRP-DLENPTVEDFQVASRQMHVL---P---IPYVEPADISNAILFLVSDDAR--YITG 287 (299)
T ss_dssp EEEEESCBSSTTTSSHHHHHHHCT-TSSSCCHHHHHHHHHHHSSS---S---CSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred EEEecCCccCccccccchhhhhhh-hhccchhhHHHHHhhhhccc---C---cCCCCHHHHHHHHHHHhCcccc--cCcC
Confidence 9999999976543211100 000 00000000000 0000000 1 3467889999999988765432 2346
Q ss_pred eEEEeeCC
Q 042694 393 NVYQIASS 400 (554)
Q Consensus 393 ~vyn~~~~ 400 (554)
+++++.++
T Consensus 288 ~~i~vdGG 295 (299)
T 3t7c_A 288 VSLPVDGG 295 (299)
T ss_dssp CEEEESTT
T ss_pred CEEeeCCC
Confidence 89998876
No 240
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.49 E-value=2.2e-13 Score=133.76 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=138.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++. ..+...++... .....++..+.+|++++ +.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~D~~~~------~~ 75 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA---NVLINGRREENVNETIKEIRA---QYPDAILQPVVADLGTE------QG 75 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH---HCTTCEEEEEECCTTSH------HH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh---hCCCceEEEEecCCCCH------HH
Confidence 5689999999999999999999999886 45555432 12222221110 00134678899999987 66
Q ss_pred HHHHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccccee
Q 042694 186 ADVIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 186 ~~~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~i 252 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||...+...
T Consensus 76 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 151 (267)
T 3t4x_A 76 CQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS---- 151 (267)
T ss_dssp HHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC----
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC----
Confidence 776665 79999999997542 3467788999999988777766431 355799999997654321
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF 332 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~ 332 (554)
+....|...+... ..+++.++.+.. ..|+.+..+.||.|..+...
T Consensus 152 ------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~-- 196 (267)
T 3t4x_A 152 ------------------------QEMAHYSATKTMQ--------LSLSRSLAELTT-GTNVTVNTIMPGSTLTEGVE-- 196 (267)
T ss_dssp ------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTT-TSEEEEEEEEECCBCCHHHH--
T ss_pred ------------------------CcchHHHHHHHHH--------HHHHHHHHHHhC-CCCeEEEEEeCCeecCccHH--
Confidence 1111121111111 123344443332 34799999999998654211
Q ss_pred cccccCCCCccce-eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 333 SGWMEGNRMMDPI-ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 333 ~g~~~~~~~~~~i-~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+.......... ........+... ........+..++|+|++++.++..... --.++++++.++
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vdGG 261 (267)
T 3t4x_A 197 -TMLNSLYPNEQLTIEEAEKRFMKEN-RPTSIIQRLIRPEEIAHLVTFLSSPLSS--AINGSALRIDGG 261 (267)
T ss_dssp -HHHHHSSTTSCCCHHHHHHHHHHHH-CTTCSSCSCBCTHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred -HHHhhcCcccCCCHHHHHHHHhhcc-CCcccccCccCHHHHHHHHHHHcCcccc--CccCCeEEECCC
Confidence 111000000000 000000000000 0000123578899999999888764332 234689999887
No 241
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.49 E-value=4.9e-13 Score=131.80 Aligned_cols=220 Identities=15% Similarity=0.094 Sum_probs=134.7
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcch-----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAE-----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lG 180 (554)
+++|+|+||||+ |+||+++++.|++.|. +|+++++. ..+.+.+.. .++.++.+|++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~l~~~~---------~~~~~~~~D~~~~--- 68 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNESLEKRVRPIAQEL---------NSPYVYELDVSKE--- 68 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTTTHHHHHHHHHHT---------TCCCEEECCTTCH---
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhc---------CCcEEEEcCCCCH---
Confidence 467899999999 9999999999999876 45555432 122222211 2367899999987
Q ss_pred CCHHHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEee
Q 042694 181 LEEDLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVST 241 (554)
Q Consensus 181 Ls~~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST 241 (554)
+..+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++++... .+-.++|++||
T Consensus 69 ---~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 69 ---EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp ---HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ---HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 66666654 68999999997542 2467889999999999999999753 11258999999
Q ss_pred ceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcc
Q 042694 242 AYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRP 321 (554)
Q Consensus 242 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp 321 (554)
....... +....|...+... ..+++.++.+.. ..|+.+.+++|
T Consensus 146 ~~~~~~~----------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~P 188 (275)
T 2pd4_A 146 LGSTKYM----------------------------AHYNVMGLAKAAL--------ESAVRYLAVDLG-KHHIRVNALSA 188 (275)
T ss_dssp GGGTSBC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHH-TTTCEEEEEEE
T ss_pred chhcCCC----------------------------CCchhhHHHHHHH--------HHHHHHHHHHhh-hcCeEEEEEee
Confidence 6543221 1111121111111 123333433332 35899999999
Q ss_pred ceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 322 SVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 322 ~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|.|.++.....+.. ......+.. .. + ...+...+++|++++.++..... ...+.++++.++
T Consensus 189 G~v~T~~~~~~~~~-------~~~~~~~~~-~~------p--~~~~~~p~dva~~~~~l~s~~~~--~~tG~~~~vdgg 249 (275)
T 2pd4_A 189 GPIRTLASSGIADF-------RMILKWNEI-NA------P--LRKNVSLEEVGNAGMYLLSSLSS--GVSGEVHFVDAG 249 (275)
T ss_dssp CCCCCTTGGGSTTH-------HHHHHHHHH-HS------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred Cccccchhhhcccc-------HHHHHHHHh-cC------C--cCCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 99976432211110 000000000 00 0 01256789999999988754321 224678888776
No 242
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.49 E-value=2.9e-13 Score=133.06 Aligned_cols=223 Identities=15% Similarity=0.110 Sum_probs=135.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+. ..++.++.+|++++ ++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~---------~~~~~~~~~Dv~d~------~~ 68 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDESGGRALEQE---------LPGAVFILCDVTQE------DD 68 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH---------CTTEEEEECCTTSH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH---------hcCCeEEEcCCCCH------HH
Confidence 5689999999999999999999999886 45555432 12222222 12478899999987 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||.......
T Consensus 69 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (270)
T 1yde_A 69 VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ 148 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC
Confidence 666654 79999999997532 2457889999999999999988642 124699999997543211
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
. ....|...+... ..+++.++.+.. ..|+++.++|||.|.++.
T Consensus 149 ~----------------------------~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~vn~v~Pg~v~t~~ 191 (270)
T 1yde_A 149 A----------------------------QAVPYVATKGAV--------TAMTKALALDES-PYGVRVNCISPGNIWTPL 191 (270)
T ss_dssp T----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECSBCCHH
T ss_pred C----------------------------CCcccHHHHHHH--------HHHHHHHHHHhh-hhCcEEEEEEeCccccch
Confidence 0 000111111111 123333333322 358999999999998753
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.......... ....+ ..+. ... + .-.+...+|++++++.++.. . .--.++++++.++
T Consensus 192 ~~~~~~~~~~---~~~~~---~~~~-~~~---p--~~r~~~p~dva~~v~~L~s~-~--~~itG~~i~vdGG 248 (270)
T 1yde_A 192 WEELAALMPD---PRASI---REGM-LAQ---P--LGRMGQPAEVGAAAVFLASE-A--NFCTGIELLVTGG 248 (270)
T ss_dssp HHHHHTTSSS---HHHHH---HHHH-HTS---T--TSSCBCHHHHHHHHHHHHHH-C--TTCCSCEEEESTT
T ss_pred hhhhhhcccc---hHHHH---HHHh-hcC---C--CCCCcCHHHHHHHHHHHccc-C--CCcCCCEEEECCC
Confidence 2110000000 00000 0000 000 1 11356789999998887764 2 1234678998887
No 243
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.49 E-value=2.3e-13 Score=131.82 Aligned_cols=222 Identities=13% Similarity=0.090 Sum_probs=137.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|+++++.. +++.+.. ...++..+.+|++++ ++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~-~~~~~~~-------~~~~~~~~~~D~~~~------~~~~ 66 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINE-SKLQELE-------KYPGIQTRVLDVTKK------KQID 66 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH-HHHGGGG-------GSTTEEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHH-------hccCceEEEeeCCCH------HHHH
Confidence 4678999999999999999999999875 556555431 2222111 113788999999987 6666
Q ss_pred HHh---cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccceeec
Q 042694 188 VIA---KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 188 ~l~---~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
.+. .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||........
T Consensus 67 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 141 (246)
T 2ag5_A 67 QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----- 141 (246)
T ss_dssp HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-----
T ss_pred HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC-----
Confidence 554 479999999997643 3567888999999999999987531 2567999999976543210
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+.. ..| ..+|. +++.++.+.. ..|+++.++|||.|.++...
T Consensus 142 ----------------------~~~------~~Y------~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~ 186 (246)
T 2ag5_A 142 ----------------------VNR------CVY------STTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQ 186 (246)
T ss_dssp ----------------------TTB------HHH------HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHH
T ss_pred ----------------------CCC------ccH------HHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCcCcCcchh
Confidence 000 112 22232 3333333322 34899999999999875321
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .............. ..... + ...++..+|+|++++.++..... ...++++++.++
T Consensus 187 ~---~~~~~~~~~~~~~~----~~~~~---~--~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~i~vdgG 242 (246)
T 2ag5_A 187 E---RIQARGNPEEARND----FLKRQ---K--TGRFATAEEIAMLCVYLASDESA--YVTGNPVIIDGG 242 (246)
T ss_dssp H---HHHHSSSHHHHHHH----HHHTC---T--TSSCEEHHHHHHHHHHHHSGGGT--TCCSCEEEECTT
T ss_pred h---hhhcccCcHHHHHH----HHhcC---C--CCCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 1 00000000000000 00000 1 12367899999999988754321 224678888776
No 244
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.49 E-value=3.3e-13 Score=131.56 Aligned_cols=229 Identities=16% Similarity=0.086 Sum_probs=135.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~v~ 67 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDATAKAVASEINQ-----AGGHAVAVKVDVSDR------DQVF 67 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------HHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HHHH
Confidence 57899999999999999999999886 45555432 12222222110 134688999999987 7776
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~~~ 249 (554)
.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+ ..++|++||.......
T Consensus 68 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 146 (256)
T 1geg_A 68 AAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN- 146 (256)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-
Confidence 6665 89999999996532 3467889999999999988887642 13 5699999997553321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+.. ..|+++.++|||.|.++..
T Consensus 147 ---------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~ 190 (256)
T 1geg_A 147 ---------------------------PELAVYSSSKFAV--------RGLTQTAARDLA-PLGITVNGYCPGIVKTPMW 190 (256)
T ss_dssp ---------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBSSHHH
T ss_pred ---------------------------CCchhHHHHHHHH--------HHHHHHHHHHHH-HcCeEEEEEEECCCccchh
Confidence 0011111111111 123344443332 2489999999999976432
Q ss_pred CCccc-cccCCCC-ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSG-WMEGNRM-MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g-~~~~~~~-~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..... +...... .......+.. .. + ...+...+|+|++++.++..... ...++++++.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~-~~------p--~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG 252 (256)
T 1geg_A 191 AEIDRQVSEAAGKPLGYGTAEFAK-RI------T--LGRLSEPEDVAACVSYLASPDSD--YMTGQSLLIDGG 252 (256)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHT-TC------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred hhhhhhccccccCChHHHHHHHHh-cC------C--CCCCcCHHHHHHHHHHHhCcccc--CCCCCEEEeCCC
Confidence 10000 0000000 0000000000 00 1 12467899999999888754321 224678888776
No 245
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.49 E-value=2.9e-13 Score=131.25 Aligned_cols=213 Identities=15% Similarity=0.160 Sum_probs=131.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||++++++|++.|. +|+++++.. . ..+.+..+.+|++++ ++.+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~---------~-----~~~~~~~~~~D~~~~------~~~~ 69 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGS---------G-----APKGLFGVEVDVTDS------DAVD 69 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSS---------C-----CCTTSEEEECCTTCH------HHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCh---------H-----HHHHhcCeeccCCCH------HHHH
Confidence 5689999999999999999999999875 455554321 0 011222488999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||........
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 148 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG- 148 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-
Confidence 6554 68999999997542 3568899999999999999988541 3567999999975532210
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
....|...+... ..+++.++.+.. ..|+++.+++||.|..+...
T Consensus 149 ---------------------------~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~ 192 (247)
T 1uzm_A 149 ---------------------------NQANYAASKAGV--------IGMARSIARELS-KANVTANVVAPGYIDTDMTR 192 (247)
T ss_dssp ---------------------------CCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH
T ss_pred ---------------------------CChhHHHHHHHH--------HHHHHHHHHHhh-hcCcEEEEEEeCCCcccchh
Confidence 000111111111 123444444332 24899999999999653211
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+. ... ....... + ...+++++|+|++++.++..... ...++++++.++
T Consensus 193 ~~~~---------~~~----~~~~~~~---p--~~~~~~~~dvA~~~~~l~s~~~~--~~~G~~i~vdgG 242 (247)
T 1uzm_A 193 ALDE---------RIQ----QGALQFI---P--AKRVGTPAEVAGVVSFLASEDAS--YISGAVIPVDGG 242 (247)
T ss_dssp HSCH---------HHH----HHHGGGC---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hcCH---------HHH----HHHHhcC---C--CCCCcCHHHHHHHHHHHcCcccc--CCcCCEEEECCC
Confidence 0000 000 0000000 1 12467899999999888764321 224688998876
No 246
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.49 E-value=6.2e-13 Score=132.54 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=140.0
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||+| +||++++++|++.|. +|++.++ ...+.+.+... ...++.++.+|++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~---~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dv~d~------ 92 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA---EVALTYLSETFKKRVDPLAE------SLGVKLTVPCDVSDA------ 92 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHHHH------HHTCCEEEECCTTCH------
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHH------hcCCeEEEEcCCCCH------
Confidence 5789999999998 999999999999886 4555432 22222222211 113467899999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
++.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...
T Consensus 93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~ 172 (296)
T 3k31_A 93 ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA 172 (296)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence 77766654 68999999997642 2467889999999999999998753 23358999999765
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+..+. .+++.++.+.. ..|+.+..++||.|
T Consensus 173 ~~~~----------------------------~~~~~Y~asKaal~--------~l~~~la~e~~-~~gIrvn~v~PG~v 215 (296)
T 3k31_A 173 EKVV----------------------------PHYNVMGVCKAALE--------ASVKYLAVDLG-KQQIRVNAISAGPV 215 (296)
T ss_dssp TSCC----------------------------TTTTHHHHHHHHHH--------HHHHHHHHHHH-TTTEEEEEEEECCC
T ss_pred ccCC----------------------------CCchhhHHHHHHHH--------HHHHHHHHHHh-hcCcEEEEEEECCC
Confidence 4321 11112222222111 23444444433 34899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+......... ........ .. + ...+...+|+|++++.++..... --.++++++.++
T Consensus 216 ~T~~~~~~~~~~-------~~~~~~~~-~~------p--~~r~~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG 273 (296)
T 3k31_A 216 RTLASSGISDFH-------YILTWNKY-NS------P--LRRNTTLDDVGGAALYLLSDLGR--GTTGETVHVDCG 273 (296)
T ss_dssp CCSSCCSCHHHH-------HHHHHHHH-HS------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred cCchhhcccchH-------HHHHHHHh-cC------C--CCCCCCHHHHHHHHHHHcCCccC--CccCCEEEECCC
Confidence 764432211100 00000000 00 0 12356779999999988765332 234689999887
No 247
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.49 E-value=5.6e-13 Score=127.69 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=88.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||+|+||++++++|++.|.+ |+++++. .+++.+.... ...++.++.+|++++ +..+.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~-~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~v~~~ 65 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKA---TYLTGRS-ESKLSTVTNC-----LSNNVGYRARDLASH------QEVEQL 65 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESC-HHHHHHHHHT-----CSSCCCEEECCTTCH------HHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCC-HHHHHHHHHH-----HhhccCeEeecCCCH------HHHHHH
Confidence 468999999999999999999998864 4544432 1222222111 235778899999988 778877
Q ss_pred hcCc----cEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-C-CCceEEEEeeceecc
Q 042694 190 AKEV----DVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-N-KLKLFVQVSTAYVNG 246 (554)
Q Consensus 190 ~~~v----diViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~~k~~v~vST~~v~~ 246 (554)
.+++ |+|||+||.... .+.++..+++|+.|+..+++.+... . +-.++|++||...+.
T Consensus 66 ~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~ 135 (230)
T 3guy_A 66 FEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ 135 (230)
T ss_dssp HHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS
T ss_pred HHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC
Confidence 7654 899999997532 3467889999999999999988653 1 122899999976543
No 248
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.48 E-value=6.3e-13 Score=131.77 Aligned_cols=237 Identities=15% Similarity=0.037 Sum_probs=141.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---------------hHHHHHHHcCCchhhhccCcEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---------------LFKCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---------------~~~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+++|+|+||||+|.||++++++|++.|. +|++++.. ..+++.+.... ......++.++.+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 83 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA---DIIAVDICKPIRAGVVDTAIPASTPEDLAETADL--VKGHNRRIVTAEV 83 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHH--HHTTTCCEEEEEC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeccccccccccccccccCCHHHHHHHHHH--HhhcCCceEEEEc
Confidence 5789999999999999999999999886 45544321 02222221110 0112457899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc----CCC
Q 042694 173 NVCENNLGLEEDLADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC----NKL 233 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~ 233 (554)
|++++ ++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... ++-
T Consensus 84 Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~ 157 (286)
T 3uve_A 84 DVRDY------DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRG 157 (286)
T ss_dssp CTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC
Confidence 99988 77766654 79999999997432 2467889999999999999988642 124
Q ss_pred ceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCC
Q 042694 234 KLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGD 313 (554)
Q Consensus 234 k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~g 313 (554)
.++|++||....... +....|...+..+ ..+++.++.+... .|
T Consensus 158 g~iv~isS~~~~~~~----------------------------~~~~~Y~asKaa~--------~~~~~~la~e~~~-~g 200 (286)
T 3uve_A 158 GSIILTSSVGGLKAY----------------------------PHTGHYVAAKHGV--------VGLMRAFGVELGQ-HM 200 (286)
T ss_dssp EEEEEECCGGGTSCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GT
T ss_pred cEEEEECchhhccCC----------------------------CCccHHHHHHHHH--------HHHHHHHHHHhcc-cC
Confidence 589999997654321 1111122112111 1244444444333 48
Q ss_pred CcEEEEccceeeecccCCccc---cccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCC
Q 042694 314 IPVVIIRPSVIESTCKEPFSG---WMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKP 390 (554)
Q Consensus 314 lp~~I~Rp~~V~g~~~~p~~g---~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~ 390 (554)
+.+..++||.|..+....... +........+ ..... ... + . ......+...+|+|++++.++..... --
T Consensus 201 I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~-~-~~~p~r~~~p~dvA~~v~fL~s~~a~--~i 272 (286)
T 3uve_A 201 IRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGP--DDMAP-ICQ-M-F-HTLPIPWVEPIDISNAVLFFASDEAR--YI 272 (286)
T ss_dssp EEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCH--HHHHH-HHH-T-T-CSSSCSCBCHHHHHHHHHHHHSGGGT--TC
T ss_pred eEEEEEecCcccCCcccccchhhhccccccccch--hhHHH-HHH-h-h-hccCCCcCCHHHHHHHHHHHcCcccc--CC
Confidence 999999999997643321000 0000000000 00000 000 0 0 00013567889999999888765332 23
Q ss_pred CCeEEEeeCC
Q 042694 391 DINVYQIASS 400 (554)
Q Consensus 391 ~~~vyn~~~~ 400 (554)
.++++++.++
T Consensus 273 tG~~i~vdGG 282 (286)
T 3uve_A 273 TGVTLPIDAG 282 (286)
T ss_dssp CSCEEEESTT
T ss_pred cCCEEeECCc
Confidence 4689998876
No 249
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.48 E-value=3e-13 Score=136.44 Aligned_cols=122 Identities=17% Similarity=0.187 Sum_probs=90.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-------hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
++|+||||||||+||++++++|++.|.+ |+...+. ..+.+.+... ....++.++.+|++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~---V~~~~r~~~~r~~~~~~~l~~~~~-----~~~~~~~~~~~Dvtd~---- 71 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHR---VYASMRDIVGRNASNVEAIAGFAR-----DNDVDLRTLELDVQSQ---- 71 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCTTTTTHHHHHHHHHHHH-----HHTCCEEEEECCTTCH----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEecCcccccCHHHHHHHHHHHH-----hcCCcEEEEEeecCCH----
Confidence 4689999999999999999999998864 4433211 1122222111 1235789999999987
Q ss_pred CHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeece
Q 042694 182 EEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAY 243 (554)
Q Consensus 182 s~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~ 243 (554)
+..+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+ ++ .+..++|++||..
T Consensus 72 --~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~-~~~g~iV~isS~~ 148 (324)
T 3u9l_A 72 --VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR-QKHGLLIWISSSS 148 (324)
T ss_dssp --HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGG
T ss_pred --HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEEecch
Confidence 77776665 89999999996532 3467888999999999999998 33 3567999999986
Q ss_pred ec
Q 042694 244 VN 245 (554)
Q Consensus 244 v~ 245 (554)
..
T Consensus 149 ~~ 150 (324)
T 3u9l_A 149 SA 150 (324)
T ss_dssp GT
T ss_pred hc
Confidence 64
No 250
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.48 E-value=1.2e-13 Score=134.52 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=84.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||||+||++++++|++.|. +|+++++.. .. ... .+.+|++++ +..+.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~--------~~-----~~~---~~~~Dl~~~------~~v~~~ 55 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRD--------AE-----VIA---DLSTAEGRK------QAIADV 55 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSS--------SS-----EEC---CTTSHHHHH------HHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCc--------hh-----hcc---ccccCCCCH------HHHHHH
Confidence 36899999999999999999999876 455554321 00 000 156788876 677777
Q ss_pred hc----CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 190 AK----EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 190 ~~----~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+ ++|++||+||......+++..+++|+.|+.++++++... .+..++|++||...+
T Consensus 56 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 56 LAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 65 459999999987645668999999999999999988632 245799999998776
No 251
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.48 E-value=2.6e-13 Score=131.27 Aligned_cols=222 Identities=11% Similarity=0.059 Sum_probs=136.3
Q ss_pred cCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILR-TVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~-~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|+||||||+|+||++++++|++ .+. +|++.+... ....+++..+.+|++++ ++.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~-------------~~~~~~~~~~~~Dv~~~------~~v~ 60 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQ-------------SFSAENLKFIKADLTKQ------QDIT 60 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSC-------------CCCCTTEEEEECCTTCH------HHHH
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEecccc-------------ccccccceEEecCcCCH------HHHH
Confidence 578999999999999999999998 443 455554320 00235678999999988 7777
Q ss_pred HHhc-----CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeec
Q 042694 188 VIAK-----EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 188 ~l~~-----~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||...+....
T Consensus 61 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----- 135 (244)
T 4e4y_A 61 NVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP----- 135 (244)
T ss_dssp HHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT-----
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC-----
Confidence 7665 79999999997532 3567889999999999999988753 1113899999976543211
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccc
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSG 334 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g 334 (554)
....|...+... ..+++.++.+.. ..|+++.+++||.|..+.......
T Consensus 136 -----------------------~~~~Y~asKaa~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~ 183 (244)
T 4e4y_A 136 -----------------------NSFAYTLSKGAI--------AQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQ 183 (244)
T ss_dssp -----------------------TBHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHH
T ss_pred -----------------------CCchhHHHHHHH--------HHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHH
Confidence 111121111111 123344443332 348999999999996643211000
Q ss_pred -cccCCC-CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 335 -WMEGNR-MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 335 -~~~~~~-~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...... ........ . ........+..++|+|++++.++..... .-.++++++.++
T Consensus 184 ~~~~~~~~~~~~~~~~----~-----~~~~p~~r~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG 240 (244)
T 4e4y_A 184 KYANNVGISFDEAQKQ----E-----EKEFPLNRIAQPQEIAELVIFLLSDKSK--FMTGGLIPIDGG 240 (244)
T ss_dssp HHHHHHTCCHHHHHHH----H-----HTTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhhhhcCCCHHHHHHH----H-----hhcCCCCCCcCHHHHHHHHHHHhcCccc--cccCCeEeECCC
Confidence 000000 00000000 0 0111123467899999999988865332 234689998776
No 252
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=5.3e-13 Score=129.64 Aligned_cols=203 Identities=14% Similarity=0.115 Sum_probs=126.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+++||||+|+||++++++|++.|. +|+++++. ..+.+.+..... .....++.++.+|++++ ++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~------~~ 73 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY---RVVLIARSKQNLEKVHDEIMRS--NKHVQEPIVLPLDITDC------TK 73 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC---EEEEEESCHHHHHHHHHHHHHH--CTTSCCCEEEECCTTCH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHh--ccccCcceEEeccCCCH------HH
Confidence 4678999999999999999999999886 45555432 222222221100 00125788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 152 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF- 152 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC--------
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-
Confidence 666554 69999999997432 2567889999999999999988431 245699999997553311
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+... .|+++..++||.|..+..
T Consensus 153 ---------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~T~~~ 196 (250)
T 3nyw_A 153 ---------------------------ADGGIYGSTKFAL--------LGLAESLYRELAP-LGIRVTTLCPGWVNTDMA 196 (250)
T ss_dssp ---------------------------CCTTHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEESSBCSHHH
T ss_pred ---------------------------CCCcchHHHHHHH--------HHHHHHHHHHhhh-cCcEEEEEecCcccCchh
Confidence 1111222222211 1244444444333 489999999998854321
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH 384 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~ 384 (554)
. .... ......++..+|++++++.++...
T Consensus 197 ~----~~~~----------------------~~~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 197 K----KAGT----------------------PFKDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp H----HTTC----------------------CSCGGGSBCHHHHHHHHHHHHTSC
T ss_pred h----hcCC----------------------CcccccCCCHHHHHHHHHHHHcCC
Confidence 1 0000 000124678999999999887643
No 253
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.48 E-value=1.1e-12 Score=126.20 Aligned_cols=121 Identities=12% Similarity=0.142 Sum_probs=88.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.. ..++..+.+|++++ ++.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~------~~v 64 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH---QVSMMGRRYQRLQQQELLL--------GNAVIGIVADLAHH------EDV 64 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH--------GGGEEEEECCTTSH------HHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHh--------cCCceEEECCCCCH------HHH
Confidence 368999999999999999999999886 45555432 222222222 23688999999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~ 246 (554)
+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||.....
T Consensus 65 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~ 140 (235)
T 3l6e_A 65 DVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV 140 (235)
T ss_dssp HHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS
T ss_pred HHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC
Confidence 66654 68999999997542 3567889999999999999988542 1123899999976543
No 254
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.47 E-value=1.2e-12 Score=129.37 Aligned_cols=209 Identities=13% Similarity=0.121 Sum_probs=125.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+... ......+.++.+|++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~d~------~~ 97 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGY---SVVITGRRPDVLDAAAGEIG----GRTGNIVRAVVCDVGDP------DQ 97 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HHHSSCEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHH----hcCCCeEEEEEcCCCCH------HH
Confidence 5789999999999999999999999886 45555432 2222222221 11123468899999988 76
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---C--CCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---N--KLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~--~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... . +-.++|++||....
T Consensus 98 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 177 (281)
T 4dry_A 98 VAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ 177 (281)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC
Confidence 666654 68999999997432 3568889999999998888877542 1 13589999997553
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
... +....|...+..+ ..+++.++.+.. ..|+.+..++||.|.
T Consensus 178 ~~~----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~-~~gI~vn~v~PG~v~ 220 (281)
T 4dry_A 178 TPR----------------------------PNSAPYTATKHAI--------TGLTKSTALDGR-MHDIACGQIDIGNAA 220 (281)
T ss_dssp CCC----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEEECBC
T ss_pred CCC----------------------------CCChhHHHHHHHH--------HHHHHHHHHHhc-ccCeEEEEEEECcCc
Confidence 321 1111122222111 123444444333 348999999999986
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhc
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHG 385 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~ 385 (554)
.+....... .... ..+..+ ...+++.+|+|++++.++..+.
T Consensus 221 T~~~~~~~~---------~~~~--~~~~~~--------~~~~~~pedvA~~v~fL~s~~~ 261 (281)
T 4dry_A 221 TDMTARMST---------GVLQ--ANGEVA--------AEPTIPIEHIAEAVVYMASLPL 261 (281)
T ss_dssp C-------C---------EEEC--TTSCEE--------ECCCBCHHHHHHHHHHHHHSCT
T ss_pred Chhhhhhcc---------hhhh--hhhccc--------ccCCCCHHHHHHHHHHHhCCCc
Confidence 533211110 0000 001111 1236788999999999887543
No 255
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.47 E-value=9.6e-13 Score=127.62 Aligned_cols=118 Identities=17% Similarity=0.205 Sum_probs=88.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.. ..++.++.+|++++ ++.+.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~------~~v~~ 63 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQERLQELKDEL--------GDNLYIAQLDVRNR------AAIEE 63 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCH------HHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------cCceEEEEcCCCCH------HHHHH
Confidence 5799999999999999999999875 45555432 122222221 24788999999987 77777
Q ss_pred Hhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 189 IAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+.+ ++|++||+||... + .+.++..+++|+.|+..+.+.+... .+..++|++||....
T Consensus 64 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 138 (248)
T 3asu_A 64 MLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138 (248)
T ss_dssp HHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhc
Confidence 765 6899999999752 2 2467889999999999999888631 245799999997654
No 256
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.47 E-value=9.2e-13 Score=128.93 Aligned_cols=125 Identities=15% Similarity=0.205 Sum_probs=92.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 67 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA---KILLGARRQARIEAIATEIRD-----AGGTALAQVLDVTDR------HS 67 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH-----TTCEEEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HH
Confidence 3578999999999999999999999886 45555432 22333322211 235788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||.....
T Consensus 68 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~ 145 (264)
T 3tfo_A 68 VAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS 145 (264)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc
Confidence 666654 79999999997543 3567889999999999888887531 2456999999976543
No 257
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=9.7e-13 Score=130.46 Aligned_cols=130 Identities=17% Similarity=0.176 Sum_probs=95.5
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+++|+|+||||+|+||++++++|++.+....+|++.++. ..+.+.+.... .....++.++.+|++++ +
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~d~------~ 100 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ---EFPNAKVHVAQLDITQA------E 100 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH---HCTTCEEEEEECCTTCG------G
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh---hCCCCeEEEEECCCCCH------H
Confidence 3689999999999999999999999987643366665432 22333322211 00135788999999998 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 185 LADVIAK-------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+.+.+.+ ++|++||+||... -.+.++..+++|+.|+..+++.+... .+..++|++||....
T Consensus 101 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 179 (287)
T 3rku_A 101 KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179 (287)
T ss_dssp GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence 7777665 5899999999653 13578899999999999999988421 245799999997654
No 258
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.47 E-value=7.8e-13 Score=130.41 Aligned_cols=223 Identities=12% Similarity=0.115 Sum_probs=137.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ..++.++.+|++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~Dv~d~------~~ 91 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA---RVFICARDAEACADTATRLSA------YGDCQAIPADLSSE------AG 91 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHTT------SSCEEECCCCTTSH------HH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh------cCceEEEEeeCCCH------HH
Confidence 5689999999999999999999999875 56666542 12222222211 12688899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCC----ceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKL----KLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~----k~~v~vST~~v 244 (554)
.+.+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+... .+. .++|++||...
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~ 171 (276)
T 2b4q_A 92 ARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG 171 (276)
T ss_dssp HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH
Confidence 666654 79999999996532 3568899999999998888877531 123 79999999866
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCC-hHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccce
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLD-VENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
+.... ... .|...+.... .+++.++.+.. ..|+++.+++||.
T Consensus 172 ~~~~~----------------------------~~~~~Y~asK~a~~--------~~~~~la~e~~-~~gI~vn~v~PG~ 214 (276)
T 2b4q_A 172 ISAMG----------------------------EQAYAYGPSKAALH--------QLSRMLAKELV-GEHINVNVIAPGR 214 (276)
T ss_dssp TCCCC----------------------------CSCTTHHHHHHHHH--------HHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred cCCCC----------------------------CCccccHHHHHHHH--------HHHHHHHHHhc-ccCeEEEEEEecc
Confidence 43211 001 1222221111 23333433332 2489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+... .+... .... +. ..... + ...+...+|+|++++.++..... ...++++++.++
T Consensus 215 v~T~~~~---~~~~~--~~~~-~~--~~~~~------p--~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG 273 (276)
T 2b4q_A 215 FPSRMTR---HIAND--PQAL-EA--DSASI------P--MGRWGRPEEMAALAISLAGTAGA--YMTGNVIPIDGG 273 (276)
T ss_dssp CCSTTTH---HHHHC--HHHH-HH--HHHTS------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CcCcchh---hcchh--HHHH-HH--hhcCC------C--CCCcCCHHHHHHHHHHHhCcccc--CCCCCEEEeCCC
Confidence 8654221 11100 0000 00 00000 1 12467889999999988765321 234678888776
No 259
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.46 E-value=5.5e-13 Score=141.75 Aligned_cols=200 Identities=15% Similarity=0.176 Sum_probs=133.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
+-.+++||||||||+||.++++.|++.+.. +|+++.+.. .+.+.++... ...++.++.+|++++
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~-----~g~~v~~~~~Dv~d~---- 291 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELEA-----LGARTTVAACDVTDR---- 291 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHHH-----TTCEEEEEECCTTCH----
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC--EEEEEcCCCCCcHHHHHHHHHHHh-----cCCEEEEEEeCCCCH----
Confidence 446789999999999999999999998753 566654321 2233222211 235789999999988
Q ss_pred CHHHHHHHhcCc------cEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccc
Q 042694 182 EEDLADVIAKEV------DVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 182 s~~~~~~l~~~v------diViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~ 248 (554)
+..+.+++++ |+|||+|+.... .+.++..+++|+.|+.++.+++... ++++||++||.......
T Consensus 292 --~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~ 368 (486)
T 2fr1_A 292 --ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGA 368 (486)
T ss_dssp --HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCC
T ss_pred --HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCC
Confidence 8888777654 999999997643 3467788899999999999999874 78999999997543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
.+ .. .|..+|.+.+.+++... ..|+++++++||.+.+..
T Consensus 369 ~g----------------------------~~------------~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~g 407 (486)
T 2fr1_A 369 PG----------------------------LG------------GYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSG 407 (486)
T ss_dssp TT----------------------------CT------------TTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---
T ss_pred CC----------------------------CH------------HHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCc
Confidence 11 00 23334555555555433 358999999999886531
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHH
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQ 383 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~ 383 (554)
.... .... .+ .......++.+++++++..++..
T Consensus 408 ------m~~~-----~~~~-----~~------~~~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 408 ------MAEG-----PVAD-----RF------RRHGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp -------------------------C------TTTTEECBCHHHHHHHHHHHHHT
T ss_pred ------ccch-----hHHH-----HH------HhcCCCCCCHHHHHHHHHHHHhC
Confidence 1111 0000 00 01123578999999999988764
No 260
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.46 E-value=1.2e-12 Score=130.00 Aligned_cols=227 Identities=12% Similarity=0.018 Sum_probs=135.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-ch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCC-----
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNL----- 179 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~l----- 179 (554)
.++|+++||||+|+||+++++.|++.|. +|++++ +. ..+.+.+... .....++.++.+|++++.-
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAAEANALSATLN----ARRPNSAITVQADLSNVATAPVSG 79 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHH----HHSTTCEEEEECCCSSSCBCCCC-
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEcCCCHHHHHHHHHHHh----hhcCCeeEEEEeecCCcccccccc
Confidence 4688999999999999999999999886 455554 32 1222222211 0123578899999998820
Q ss_pred ------CCCHHHHHHHhc-------CccEEEEcCCCCCc---------------------hhhHHHHHHHhchHHHHHHH
Q 042694 180 ------GLEEDLADVIAK-------EVDVIVNSAANTTF---------------------DERYDIAIDINTRGPCRLME 225 (554)
Q Consensus 180 ------GLs~~~~~~l~~-------~vdiViH~AA~v~~---------------------~~~~~~~~~~Nv~gt~~ll~ 225 (554)
+-..++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 159 (291)
T 1e7w_A 80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 159 (291)
T ss_dssp ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence 000005555443 79999999997532 45677889999999999999
Q ss_pred HHHHc---CC------CceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCC
Q 042694 226 FAKQC---NK------LKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFST 296 (554)
Q Consensus 226 la~~~---~~------~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~ 296 (554)
++... .+ ..++|++||...+... +....|...+...
T Consensus 160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------------~~~~~Y~asKaa~------- 204 (291)
T 1e7w_A 160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------------LGYTIYTMAKGAL------- 204 (291)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------------TTCHHHHHHHHHH-------
T ss_pred HHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------------------------CCCchhHHHHHHH-------
Confidence 88642 12 4689999997654321 1111122112111
Q ss_pred chHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCccc-ccchhhHHHH
Q 042694 297 DGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGIL-DVVPADMVVN 375 (554)
Q Consensus 297 ~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~-d~vpVD~va~ 375 (554)
..+++.++.+.. ..|+.+..++||.|..+. + .+ . ........ .. + .. -+...+++|+
T Consensus 205 -~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~-~-~~---~------~~~~~~~~-~~------p--~~~r~~~pedvA~ 262 (291)
T 1e7w_A 205 -EGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D-MP---P------AVWEGHRS-KV------P--LYQRDSSAAEVSD 262 (291)
T ss_dssp -HHHHHHHHHHHG-GGTEEEEEEEESSBCCGG-G-SC---H------HHHHHHHT-TC------T--TTTSCBCHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCeEEEEEeeCCccCCc-c-CC---H------HHHHHHHh-hC------C--CCCCCCCHHHHHH
Confidence 123444444333 348999999999985432 1 10 0 00000000 00 0 01 3567899999
Q ss_pred HHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 376 ATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 376 aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+++.++..... -..+.++++.++
T Consensus 263 ~v~~l~s~~~~--~itG~~i~vdGG 285 (291)
T 1e7w_A 263 VVIFLCSSKAK--YITGTCVKVDGG 285 (291)
T ss_dssp HHHHHHSGGGT--TCCSCEEEESTT
T ss_pred HHHHHhCCccc--CccCcEEEECCC
Confidence 99988764321 234678888776
No 261
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.46 E-value=6.8e-13 Score=129.80 Aligned_cols=218 Identities=10% Similarity=0.072 Sum_probs=136.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--h---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--E---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
+++|+|+||||+|+||++++++|++.|. +|+++.+ . ..+.+.+.... ...++.++.+|++++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~----- 75 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV---NLVLHYHQAKDSDTANKLKDELED-----QGAKVALYQSDLSNE----- 75 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC---EEEEEESCGGGHHHHHHHHHHHHT-----TTCEEEEEECCCCSH-----
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecCccCHHHHHHHHHHHHh-----cCCcEEEEECCCCCH-----
Confidence 5689999999999999999999999876 4454421 1 22222222211 245789999999988
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccc
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~ 247 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||......
T Consensus 76 -~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~ 154 (262)
T 3ksu_A 76 -EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY 154 (262)
T ss_dssp -HHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH
T ss_pred -HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC
Confidence 77776664 79999999997532 3467888999999999999999752 23458999999765443
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccce
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
..+ .. .|..+|. +++.++.+.. ..|+.+..+.||.
T Consensus 155 ~~~----------------------------~~------------~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~ 193 (262)
T 3ksu_A 155 TGF----------------------------YS------------TYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGP 193 (262)
T ss_dssp HCC----------------------------CC------------C-----CHHHHHHHHHHHHTT-TTTCEEEEEEECC
T ss_pred CCC----------------------------Cc------------hhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCC
Confidence 210 00 2344443 4444444433 3489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+.... .... ....... .......+...+++|++++.++.. . .--.++++++.++
T Consensus 194 v~T~~~~~---~~~~-----~~~~~~~---------~~~~~~r~~~pedvA~~v~~L~s~-~--~~itG~~i~vdGg 250 (262)
T 3ksu_A 194 MDTSFFYG---QETK-----ESTAFHK---------SQAMGNQLTKIEDIAPIIKFLTTD-G--WWINGQTIFANGG 250 (262)
T ss_dssp CCTHHHHT---CC--------------------------CCCCSCCGGGTHHHHHHHHTT-T--TTCCSCEEEESTT
T ss_pred CcCccccc---cCch-----HHHHHHH---------hcCcccCCCCHHHHHHHHHHHcCC-C--CCccCCEEEECCC
Confidence 85432110 0000 0000000 000112467789999999888764 2 2234689999887
No 262
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.46 E-value=6.4e-13 Score=128.28 Aligned_cols=203 Identities=11% Similarity=0.055 Sum_probs=129.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|+||||+|+||++++++|++.|. +|+++++..- . .......+.+|++++ ++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--------~-----~~~~~~~~~~D~~~~------~~v~ 62 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVEN--------E-----EASASVIVKMTDSFT------EQAD 62 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCC--------T-----TSSEEEECCCCSCHH------HHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCChh--------h-----ccCCcEEEEcCCCCH------HHHH
Confidence 4578999999999999999999999876 4555543210 0 112456788999987 6666
Q ss_pred HHhc---------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccc
Q 042694 188 VIAK---------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~---------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ ++|++||+||... ..+.++..+++|+.|+..+++.+... .+-.++|++||...+....
T Consensus 63 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 142 (241)
T 1dhr_A 63 QVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP 142 (241)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT
T ss_pred HHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC
Confidence 5543 7999999999643 12457788999999999999998753 1225899999976643211
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---h--cCCCcEEEEcccee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---E--RGDIPVVIIRPSVI 324 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~--~~glp~~I~Rp~~V 324 (554)
.. .. |..+|...+.+.+... . ..|+.+.+++||.|
T Consensus 143 ----------------------------~~------~~------Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v 182 (241)
T 1dhr_A 143 ----------------------------GM------IG------YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL 182 (241)
T ss_dssp ----------------------------TB------HH------HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred ----------------------------Cc------hH------HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc
Confidence 01 11 1222332233333222 1 35799999999988
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
-.+... .+.. .......+|.+++|++++.++..... ...++++++.++
T Consensus 183 ~T~~~~---~~~~-----------------------~~~~~~~~~~~~vA~~v~~l~~~~~~--~~~G~~~~v~g~ 230 (241)
T 1dhr_A 183 DTPMNR---KSMP-----------------------EADFSSWTPLEFLVETFHDWITGNKR--PNSGSLIQVVTT 230 (241)
T ss_dssp ECHHHH---HHST-----------------------TSCGGGSEEHHHHHHHHHHHHTTTTC--CCTTCEEEEEEE
T ss_pred cCcccc---ccCc-----------------------chhhccCCCHHHHHHHHHHHhcCCCc--CccceEEEEeCC
Confidence 543210 0000 00012357789999999887754321 234678887765
No 263
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.45 E-value=1e-12 Score=126.66 Aligned_cols=221 Identities=12% Similarity=0.098 Sum_probs=131.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||||+||++++++|++.|. +|+++++..-. +.+.. .+..+.+|+++..+ ++..+.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~---~V~~~~r~~~~-~~~~~----------~~~~~~~D~~~~~~---~~~~~~~ 64 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY---RVAIASRNPEE-AAQSL----------GAVPLPTDLEKDDP---KGLVKRA 64 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH-HHHHH----------TCEEEECCTTTSCH---HHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH-HHHhh----------CcEEEecCCchHHH---HHHHHHH
Confidence 57899999999999999999999876 45555433211 22211 26778999987311 1222222
Q ss_pred ---hcCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccceeeccc
Q 042694 190 ---AKEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 190 ---~~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
..++|++||+|+.... .+.++..+++|+.|+..+++.+... .+..++|++||...+....
T Consensus 65 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 137 (239)
T 2ekp_A 65 LEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG------- 137 (239)
T ss_dssp HHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------
Confidence 2489999999996532 3468899999999999999888431 2567999999987654320
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWM 336 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~ 336 (554)
+ +....|...+... ..+++.++.+.. ..|+++.++|||.|.++......
T Consensus 138 -~------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~--- 186 (239)
T 2ekp_A 138 -P------------------VPIPAYTTAKTAL--------LGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLR--- 186 (239)
T ss_dssp -T------------------SCCHHHHHHHHHH--------HHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHH---
T ss_pred -C------------------CCCccHHHHHHHH--------HHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccc---
Confidence 0 0111121111111 022333333332 24899999999999764321100
Q ss_pred cCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 337 EGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 337 ~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. ........ ... + ...+...+|+|++++.++..... ...++++++.++
T Consensus 187 ~~----~~~~~~~~-~~~------p--~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG 235 (239)
T 2ekp_A 187 QN----PELYEPIT-ARI------P--MGRWARPEEIARVAAVLCGDEAE--YLTGQAVAVDGG 235 (239)
T ss_dssp TC----HHHHHHHH-TTC------T--TSSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred cC----HHHHHHHH-hcC------C--CCCCcCHHHHHHHHHHHcCchhc--CCCCCEEEECCC
Confidence 00 00000000 000 1 12367889999999887754321 224678888776
No 264
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.45 E-value=1.1e-12 Score=128.57 Aligned_cols=206 Identities=18% Similarity=0.181 Sum_probs=129.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
..+|+|+||||+|+||++++++|++.|.+ |+++++. .+++.+. ...++..+.+|++++ ++.+
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~-~~~~~~~--------~~~~~~~~~~Dv~d~------~~v~ 75 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARR-VERLKAL--------NLPNTLCAQVDVTDK------YTFD 75 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESC-HHHHHTT--------CCTTEEEEECCTTCH------HHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECC-HHHHHHh--------hcCCceEEEecCCCH------HHHH
Confidence 56789999999999999999999998875 4444432 1222221 234788999999987 7766
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+...
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-- 153 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-- 153 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--
T ss_pred HHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC--
Confidence 6655 79999999997532 3567889999999999988776421 255799999997654321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+....|...+... ..+++.++.+... .|+++..++||.|..+...
T Consensus 154 --------------------------~~~~~Y~asK~a~--------~~~~~~la~e~~~-~gi~vn~v~PG~v~T~~~~ 198 (266)
T 3p19_A 154 --------------------------PDHAAYCGTKFAV--------HAISENVREEVAA-SNVRVMTIAPSAVKTELLS 198 (266)
T ss_dssp --------------------------TTCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBSSSGGG
T ss_pred --------------------------CCCchHHHHHHHH--------HHHHHHHHHHhcc-cCcEEEEEeeCccccchhh
Confidence 1111122212111 1234444444333 4899999999999654321
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH 384 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~ 384 (554)
.... ............ ....++.++|||++++.++..+
T Consensus 199 ~~~~--------~~~~~~~~~~~~--------~~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 199 HTTS--------QQIKDGYDAWRV--------DMGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp GCSC--------HHHHHHHHHHHH--------HTTCCBCHHHHHHHHHHHHHSC
T ss_pred cccc--------hhhhHHHHhhcc--------cccCCCCHHHHHHHHHHHHcCC
Confidence 1100 000000000000 0124678999999999988754
No 265
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.45 E-value=5.1e-13 Score=129.99 Aligned_cols=213 Identities=12% Similarity=0.112 Sum_probs=131.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||||+||++++++|++.|. +|++.++.. . ..+++.++.+|++++ ++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~---------~-----~~~~~~~~~~Dl~d~------~~v~ 75 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGD---KVAITYRSG---------E-----PPEGFLAVKCDITDT------EQVE 75 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSS---------C-----CCTTSEEEECCTTSH------HHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCh---------H-----hhccceEEEecCCCH------HHHH
Confidence 5689999999999999999999999886 455554321 0 122467899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|++||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||........+
T Consensus 76 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~ 155 (253)
T 2nm0_A 76 QAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG 155 (253)
T ss_dssp HHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC
Confidence 6654 47999999997542 2467889999999999999887542 24679999999755332100
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
...|..+|... ..+++.++.+.. ..|+.+.+++||.|..+...
T Consensus 156 ----------------------------------~~~Y~asK~a~--~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~ 198 (253)
T 2nm0_A 156 ----------------------------------QANYAASKAGL--VGFARSLARELG-SRNITFNVVAPGFVDTDMTK 198 (253)
T ss_dssp ----------------------------------HHHHHHHHHHH--HHHHHHHHHHHC-SSSEEEEEEEECSBCC----
T ss_pred ----------------------------------cHHHHHHHHHH--HHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchh
Confidence 01122221000 123333333332 35899999999988543221
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+ .. .. ....... + ...++..+|+|++++.++..... ...++++.+.++
T Consensus 199 ~~~---~~------~~----~~~~~~~---p--~~~~~~p~dvA~~i~~l~s~~~~--~~tG~~i~vdGG 248 (253)
T 2nm0_A 199 VLT---DE------QR----ANIVSQV---P--LGRYARPEEIAATVRFLASDDAS--YITGAVIPVDGG 248 (253)
T ss_dssp --------------CH----HHHHTTC---T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hcC---HH------HH----HHHHhcC---C--CCCCcCHHHHHHHHHHHhCcccc--CCcCcEEEECCc
Confidence 100 00 00 0000000 1 12467899999999888765321 224678888776
No 266
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.45 E-value=4.1e-13 Score=130.52 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=129.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+|+|+||||+|+||++++++|++.|. +|+++++... . ..-..+..|++++ ++.+.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~-----~----------~~~~~~~~d~~d~------~~v~~ 76 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSW---NTISIDFREN-----P----------NADHSFTIKDSGE------EEIKS 76 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCC-----T----------TSSEEEECSCSSH------HHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcc-----c----------ccccceEEEeCCH------HHHHH
Confidence 468999999999999999999999886 4565543210 0 0113467888776 66666
Q ss_pred Hhc-------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccccee
Q 042694 189 IAK-------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i 252 (554)
+.+ .+|+|||+||... ..+.++..+++|+.|+.++++.+... .+-.++|++||...+....
T Consensus 77 ~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--- 153 (251)
T 3orf_A 77 VIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS--- 153 (251)
T ss_dssp HHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT---
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC---
Confidence 654 5799999999632 13567889999999999999999763 1224899999976543211
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh-h----cCCCcEEEEccceeeec
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL-E----RGDIPVVIIRPSVIEST 327 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~-~----~~glp~~I~Rp~~V~g~ 327 (554)
.. . .|..+|...+.+.+... + ..|+.+.+++||.|..+
T Consensus 154 -------------------------~~------~------~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~ 196 (251)
T 3orf_A 154 -------------------------GM------I------AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP 196 (251)
T ss_dssp -------------------------TB------H------HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred -------------------------CC------c------hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence 11 1 12222333333333322 2 35899999999988653
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... .+.. ......+++++|+|++++.++..+.. ....++++++.++
T Consensus 197 ~~~---~~~~-----------------------~~~~~~~~~~~dva~~i~~l~~~~~~-~~~tG~~i~v~~g 242 (251)
T 3orf_A 197 TNR---KYMS-----------------------DANFDDWTPLSEVAEKLFEWSTNSDS-RPTNGSLVKFETK 242 (251)
T ss_dssp HHH---HHCT-----------------------TSCGGGSBCHHHHHHHHHHHHHCGGG-CCCTTCEEEEEEE
T ss_pred chh---hhcc-----------------------cccccccCCHHHHHHHHHHHhcCccc-cCCcceEEEEecC
Confidence 221 0000 01123577899999999998876121 1234678888766
No 267
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.44 E-value=2.2e-12 Score=126.89 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=88.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ..++.++.+|++++ ++.+.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~---~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~------~~v~~ 86 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW---SLVLTGRREERLQALAGELSA------KTRVLPLTLDVRDR------AAMSA 86 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTT------TSCEEEEECCTTCH------HHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhc------CCcEEEEEcCCCCH------HHHHH
Confidence 7999999999999999999999886 45555432 22233322211 14788999999988 77777
Q ss_pred HhcC-------ccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCc-eEEEEeeceec
Q 042694 189 IAKE-------VDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLK-LFVQVSTAYVN 245 (554)
Q Consensus 189 l~~~-------vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k-~~v~vST~~v~ 245 (554)
+.++ +|++||+||.... .+.++..+++|+.|+..+.+.+... .+.. ++|++||...+
T Consensus 87 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~ 162 (272)
T 2nwq_A 87 AVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK 162 (272)
T ss_dssp HHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc
Confidence 7654 5999999997532 3567889999999988887776421 2445 99999997654
No 268
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.43 E-value=1.7e-12 Score=127.94 Aligned_cols=226 Identities=11% Similarity=0.054 Sum_probs=136.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|+||++++++|++.|. +|++.++ ...+.+.+.... ...++..+.+|++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 96 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA---HVILHGVKPGSTAAVQQRIIA-----SGGTAQELAGDLSEA------GA 96 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSTTTTHHHHHHHHH-----TTCCEEEEECCTTST------TH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHHh-----cCCeEEEEEecCCCH------HH
Confidence 5789999999999999999999999886 4555432 222333222211 235788999999988 66
Q ss_pred HHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||.......
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~- 175 (275)
T 4imr_A 97 GTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK- 175 (275)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-
Confidence 555554 79999999996432 3467889999999999999988431 245699999997654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+....|...+... ..+++.++.+... .|+.+..++||.|..+..
T Consensus 176 ---------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gI~vn~v~PG~v~T~~~ 219 (275)
T 4imr_A 176 ---------------------------SVVTAYAATKAAQ--------HNLIQSQARDFAG-DNVLLNTLAPGLVDTDRN 219 (275)
T ss_dssp ---------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEESSBCSHHH
T ss_pred ---------------------------CCchhhHHHHHHH--------HHHHHHHHHHhcc-cCcEEEEEEeccccCccc
Confidence 1111122112111 1234444443332 489999999999865321
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. +... ............. + ..-+...+|+|++++.++..... --.++++++.++
T Consensus 220 ~~---~~~~---~~~~~~~~~~~~~------p--~~r~~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG 274 (275)
T 4imr_A 220 AD---RRAQ---DPEGWDEYVRTLN------W--MGRAGRPEEMVGAALFLASEACS--FMTGETIFLTGG 274 (275)
T ss_dssp HH---HHHH---CHHHHHHHHHHHS------T--TCSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESSC
T ss_pred cc---cccc---ChHHHHHHHhhcC------c--cCCCcCHHHHHHHHHHHcCcccC--CCCCCEEEeCCC
Confidence 10 0000 0000000000000 0 11245688999999888765332 224678888664
No 269
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.43 E-value=2.1e-12 Score=127.63 Aligned_cols=121 Identities=15% Similarity=0.211 Sum_probs=89.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|. +|++.++. ..+.+.+. ...++.++.+|++++ ++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~------~~ 65 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA---RVAVLDKSAERLRELEVA--------HGGNAVGVVGDVRSL------QD 65 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------TBTTEEEEECCTTCH------HH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHHHHHHHHHH--------cCCcEEEEEcCCCCH------HH
Confidence 4689999999999999999999999886 55655432 22222222 235789999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... ++-.++|++||...
T Consensus 66 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~ 145 (281)
T 3zv4_A 66 QKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG 145 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchh
Confidence 665544 68999999997532 1247788999999999999988642 12258999999755
Q ss_pred c
Q 042694 245 N 245 (554)
Q Consensus 245 ~ 245 (554)
.
T Consensus 146 ~ 146 (281)
T 3zv4_A 146 F 146 (281)
T ss_dssp T
T ss_pred c
Confidence 3
No 270
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.42 E-value=1e-12 Score=125.32 Aligned_cols=204 Identities=12% Similarity=0.045 Sum_probs=127.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+++||||+|+||++++++|++.|. +|++.++.. + +|++++ +..+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~-----------------~------~D~~~~------~~v~ 51 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHT---IVHVASRQT-----------------G------LDISDE------KSVY 51 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTE---EEEEESGGG-----------------T------CCTTCH------HHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEecCCc-----------------c------cCCCCH------HHHH
Confidence 4678999999999999999999998775 555555321 0 788887 7777
Q ss_pred HHhc---CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeecc
Q 042694 188 VIAK---EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEK 255 (554)
Q Consensus 188 ~l~~---~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~ 255 (554)
.+.+ ++|++||+||... ..+.++..+++|+.|+..+++.+... .+-.++|++||...+....
T Consensus 52 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------ 125 (223)
T 3uce_A 52 HYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------ 125 (223)
T ss_dssp HHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------
T ss_pred HHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------
Confidence 6665 7999999999752 13567889999999999999999753 1224899999876543211
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
....|...+... ..+++.++.+. ..+.+..++||.|..+.......-
T Consensus 126 ----------------------~~~~Y~asK~a~--------~~~~~~la~e~---~~i~vn~v~PG~v~t~~~~~~~~~ 172 (223)
T 3uce_A 126 ----------------------NTYVKAAINAAI--------EATTKVLAKEL---APIRVNAISPGLTKTEAYKGMNAD 172 (223)
T ss_dssp ----------------------TCHHHHHHHHHH--------HHHHHHHHHHH---TTSEEEEEEECSBCSGGGTTSCHH
T ss_pred ----------------------CchHHHHHHHHH--------HHHHHHHHHhh---cCcEEEEEEeCCCcchhhhhcchh
Confidence 111111111111 12333333322 238999999999976433211110
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .......... ......+..++|+|++++.++.... ..++++++.++
T Consensus 173 ~-----~~~~~~~~~~---------~~~~~~~~~~~dvA~~~~~l~~~~~----~tG~~i~vdgG 219 (223)
T 3uce_A 173 D-----RDAMYQRTQS---------HLPVGKVGEASDIAMAYLFAIQNSY----MTGTVIDVDGG 219 (223)
T ss_dssp H-----HHHHHHHHHH---------HSTTCSCBCHHHHHHHHHHHHHCTT----CCSCEEEESTT
T ss_pred h-----HHHHHHHHhh---------cCCCCCccCHHHHHHHHHHHccCCC----CCCcEEEecCC
Confidence 0 0000000000 0011346788999999988876422 24689998876
No 271
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.42 E-value=1.9e-12 Score=125.24 Aligned_cols=215 Identities=18% Similarity=0.183 Sum_probs=114.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCC-CCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNL-GLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~l-GLs~~~~ 186 (554)
.++|+|+||||+|+||++++++|++ +. +|+++++.. +++.+.. ...++.++.+|++++.. ....+..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~---~v~~~~r~~-~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DH---IVYALGRNP-EHLAALA-------EIEGVEPIESDIVKEVLEEGGVDKL 70 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TS---EEEEEESCH-HHHHHHH-------TSTTEEEEECCHHHHHHTSSSCGGG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CC---eEEEEeCCH-HHHHHHH-------hhcCCcceecccchHHHHHHHHHHH
Confidence 3578999999999999999999987 54 566655431 2222221 12468889999876511 0000011
Q ss_pred HHHhcCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccceeecccc
Q 042694 187 DVIAKEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRGKVMEKPF 257 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~~i~E~~~ 257 (554)
+. ..++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.++|++||...+....
T Consensus 71 ~~-~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 141 (245)
T 3e9n_A 71 KN-LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP-------- 141 (245)
T ss_dssp TT-CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-----------------
T ss_pred Hh-cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC--------
Confidence 11 1379999999997543 2457788999999988888877531 1125899999986654321
Q ss_pred CCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccccc
Q 042694 258 CMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWME 337 (554)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~ 337 (554)
....|...+... ..+++.++.+.. ..|+.+.+++||.|.++.... +.+
T Consensus 142 --------------------~~~~Y~asK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~---~~~ 189 (245)
T 3e9n_A 142 --------------------GNTIYAASKHAL--------RGLADAFRKEEA-NNGIRVSTVSPGPTNTPMLQG---LMD 189 (245)
T ss_dssp ---------------------CHHHHHHHHHH--------HHHHHHHHHHHG-GGTCEEEEEEECCC-------------
T ss_pred --------------------CchHHHHHHHHH--------HHHHHHHHHHhh-hcCeEEEEEecCCccCchhhh---hhh
Confidence 111111111111 123333333322 348999999999997643211 110
Q ss_pred CCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeC
Q 042694 338 GNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIAS 399 (554)
Q Consensus 338 ~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~ 399 (554)
. .+.. + ....++.++|+|++++.++.... ...+||+.-
T Consensus 190 ~----------~~~~----~-----~~~~~~~p~dvA~~i~~l~~~~~-----~~~~~~i~~ 227 (245)
T 3e9n_A 190 S----------QGTN----F-----RPEIYIEPKEIANAIRFVIDAGE-----TTQITNVDV 227 (245)
T ss_dssp -------------------------CCGGGSCHHHHHHHHHHHHTSCT-----TEEEEEEEE
T ss_pred h----------hhcc----c-----ccccCCCHHHHHHHHHHHHcCCC-----ccceeeeEE
Confidence 0 0000 0 01346789999999998876532 246787753
No 272
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.42 E-value=5.8e-13 Score=142.21 Aligned_cols=221 Identities=14% Similarity=0.205 Sum_probs=143.5
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
+-.+++||||||||+||.++++.|++.+.. +|+++.+. ..+.+.++... ...++.++.+|++++
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~-----~g~~v~~~~~Dvtd~---- 324 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE--RLVLTSRRGPEAPGAAELAEELRG-----HGCEVVHAACDVAER---- 324 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHT-----TTCEEEEEECCSSCH----
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc--EEEEEecCCcccHHHHHHHHHHHh-----cCCEEEEEEeCCCCH----
Confidence 346789999999999999999999987653 56655432 12333332211 235789999999987
Q ss_pred CHHHHHHHhcC--ccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee
Q 042694 182 EEDLADVIAKE--VDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 182 s~~~~~~l~~~--vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i 252 (554)
+.++.++++ +|+|||+|+.... .+.++..+++|+.|+.++.+++..+.++++||++||........+
T Consensus 325 --~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-- 400 (511)
T 2z5l_A 325 --DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-- 400 (511)
T ss_dssp --HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT--
T ss_pred --HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC--
Confidence 888887764 9999999998653 246778899999999999999876436789999999754221110
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF 332 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~ 332 (554)
. . .|..+|...+.+++.. ...|+++++++||.+...
T Consensus 401 --------------------------~------~------~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~t----- 436 (511)
T 2z5l_A 401 --------------------------Q------G------AYAAANAALDALAERR-RAAGLPATSVAWGLWGGG----- 436 (511)
T ss_dssp --------------------------B------H------HHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCST-----
T ss_pred --------------------------C------H------HHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCC-----
Confidence 0 1 1223345555555543 345899999999987321
Q ss_pred cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHH
Q 042694 333 SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLAR 412 (554)
Q Consensus 333 ~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~ 412 (554)
+..... ... .+. ......++.+++++++..++.... ..+ .+. .+.|..+..
T Consensus 437 -gm~~~~--~~~--------~~~------~~g~~~l~~e~~a~~l~~al~~~~------~~v-~v~-----~~d~~~~~~ 487 (511)
T 2z5l_A 437 -GMAAGA--GEE--------SLS------RRGLRAMDPDAAVDALLGAMGRND------VCV-TVV-----DVDWERFAP 487 (511)
T ss_dssp -TCCCCH--HHH--------HHH------HHTBCCBCHHHHHHHHHHHHHHTC------SEE-EEC-----CBCHHHHHH
T ss_pred -cccccc--cHH--------HHH------hcCCCCCCHHHHHHHHHHHHhCCC------CEE-EEE-----eCCHHHHHh
Confidence 111110 000 000 011346889999999998876532 122 222 457877766
Q ss_pred HHH
Q 042694 413 LLH 415 (554)
Q Consensus 413 ~~~ 415 (554)
.+.
T Consensus 488 ~~~ 490 (511)
T 2z5l_A 488 ATN 490 (511)
T ss_dssp HHH
T ss_pred hhc
Confidence 544
No 273
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.41 E-value=1.6e-12 Score=131.36 Aligned_cols=129 Identities=13% Similarity=0.082 Sum_probs=90.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++|+|+||||||+||++++++|++.+.+|-.+..-... ......+.... ......++.++.+|++++ +.+
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~------~~v 72 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARA--LACPPGSLETLQLDVRDS------KSV 72 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHH--TTCCTTSEEEEECCTTCH------HHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhh--ccCCCCceEEEEecCCCH------HHH
Confidence 36899999999999999999999988765222211111 11111111100 000125788999999987 777
Q ss_pred HHHhcC-----ccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceec
Q 042694 187 DVIAKE-----VDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~~-----vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~ 245 (554)
+.+.+. +|++||+|+.... .+.++..+++|+.|+.++++.+.. + .+..++|++||....
T Consensus 73 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~ 146 (327)
T 1jtv_A 73 AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL 146 (327)
T ss_dssp HHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 777764 9999999986432 246788999999999999998732 1 256799999997654
No 274
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.40 E-value=5.6e-12 Score=123.45 Aligned_cols=236 Identities=12% Similarity=0.065 Sum_probs=138.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|.||++++++|++.|. +|++.++. ..+.+.+.... .....++..+.+|++++ ++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~~~------~~ 73 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA---AVAFCARDGERLRAAESALRQ---RFPGARLFASVCDVLDA------LQ 73 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH---HSTTCCEEEEECCTTCH------HH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHH---hcCCceEEEEeCCCCCH------HH
Confidence 5689999999999999999999999886 45555432 22222222110 01123589999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||.......
T Consensus 74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 153 (265)
T 3lf2_A 74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE 153 (265)
T ss_dssp HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC
Confidence 665553 78999999997543 3567889999999999999998642 234589999997654321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....|...+..+ ..+++.++.+... .|+++..++||.|..+.
T Consensus 154 ----------------------------~~~~~Y~asKaa~--------~~l~~~la~e~~~-~gi~vn~v~PG~v~t~~ 196 (265)
T 3lf2_A 154 ----------------------------PHMVATSAARAGV--------KNLVRSMAFEFAP-KGVRVNGILIGLVESGQ 196 (265)
T ss_dssp ----------------------------TTBHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCHH
T ss_pred ----------------------------CCchhhHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEEeCcCcCch
Confidence 1111121111111 1244444444433 48999999999996642
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... +.........-...... .+.. ....-.-.+...+|+|++++.++..... --.++++++.++
T Consensus 197 ~~~---~~~~~~~~~~~~~~~~~-~~~~--~~~~p~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vdGG 260 (265)
T 3lf2_A 197 WRR---RFEAREERELDWAQWTA-QLAR--NKQIPLGRLGKPIEAARAILFLASPLSA--YTTGSHIDVSGG 260 (265)
T ss_dssp HHH---HHTC------CHHHHHH-HHHH--HTTCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSEEEEESSS
T ss_pred hhh---hhhhhhhhccCHHHHHH-HHhh--ccCCCcCCCcCHHHHHHHHHHHhCchhc--CcCCCEEEECCC
Confidence 211 11000000000000000 0000 0000012366789999999988764332 234689988876
No 275
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.40 E-value=2.3e-13 Score=137.52 Aligned_cols=177 Identities=13% Similarity=0.012 Sum_probs=111.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC----CccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP----DVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~----~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+||||+||+|++|+..|+..+. .+..|++++... .+++...... .....+..+ +|+... +
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~d----l~~~~~~~~-~di~~~------~ 72 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVME----LEDCAFPLL-AGLEAT------D 72 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH----HHTTTCTTE-EEEEEE------S
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhh----hhccccccc-CCeEec------c
Confidence 46899999999999999999998653 123778887542 1222111000 000011112 566554 4
Q ss_pred HHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEEeece-ecccccceeeccccCCCC
Q 042694 185 LADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQVSTAY-VNGQRRGKVMEKPFCMGD 261 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~vST~~-v~~~~~~~i~E~~~~~~~ 261 (554)
++...++++|+|||+||..+- ..+..++.+.|+.+|+++++.+++..+.+ +++++|+.. +... +.++..+
T Consensus 73 ~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~--- 145 (327)
T 1y7t_A 73 DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAP--- 145 (327)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCT---
T ss_pred ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcC---
Confidence 445556899999999997653 34567889999999999999999863244 666666532 0111 1111000
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
.. ++ .+.|..+|..++++...+.+..|++++++||+.|||+..
T Consensus 146 ~~-------------~p------------~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 146 GL-------------NP------------RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp TS-------------CG------------GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred CC-------------Ch------------hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 00 00 013556777778877666566689999999999999765
No 276
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.39 E-value=4e-12 Score=122.98 Aligned_cols=126 Identities=12% Similarity=0.081 Sum_probs=89.0
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccC--CCCCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNV--CENNLGLE 182 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl--~~~~lGLs 182 (554)
.+++|+|+||||+|+||++++++|++.|. +|+++++. ..+.+.+... .....++.++.+|+ +++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~d~d~~~~----- 78 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA---SVVLLGRTEASLAEVSDQIK----SAGQPQPLIIALNLENATA----- 78 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHH----HTTSCCCEEEECCTTTCCH-----
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEecCHHHHHHHHHHHH----hcCCCCceEEEeccccCCH-----
Confidence 36789999999999999999999999886 45555432 2222222221 11124566777887 554
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...
T Consensus 79 -~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~ 157 (247)
T 3i1j_A 79 -QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG 157 (247)
T ss_dssp -HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGG
T ss_pred -HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhh
Confidence 66555543 79999999997531 2567889999999999999988531 24568999999755
Q ss_pred c
Q 042694 245 N 245 (554)
Q Consensus 245 ~ 245 (554)
.
T Consensus 158 ~ 158 (247)
T 3i1j_A 158 R 158 (247)
T ss_dssp T
T ss_pred c
Confidence 3
No 277
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.39 E-value=4.4e-12 Score=124.26 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=90.2
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
+++|+|+||||+ |+||++++++|++.|. +|+++.. ...+...++.. .....++.++.+|++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~---~v~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~----- 85 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA---AVAITYASRAQGAEENVKELE----KTYGIKAKAYKCQVDSY----- 85 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC---EEEECBSSSSSHHHHHHHHHH----HHHCCCEECCBCCTTCH-----
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEeCCcchhHHHHHHHHH----HhcCCceeEEecCCCCH-----
Confidence 578999999999 8999999999999876 4554432 11111111110 11245788999999987
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||....
T Consensus 86 -~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 164 (267)
T 3gdg_A 86 -ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH 164 (267)
T ss_dssp -HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred -HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence 66666654 67999999997542 3567889999999999999988321 245689999997653
No 278
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.38 E-value=5.8e-12 Score=124.77 Aligned_cols=124 Identities=15% Similarity=0.256 Sum_probs=92.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---------hHHHHHHHcCCchhhhccCcEEEEEccCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---------LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENN 178 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~ 178 (554)
.++|+++||||+|.||++++++|++.|. +|+++++. ..+.+.+... ....++.++.+|++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~- 77 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA---NVALVAKSAEPHPKLPGTIYTAAKEIE-----EAGGQALPIVGDIRDG- 77 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHHH-----HHTSEEEEEECCTTSH-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECChhhhhhhhHHHHHHHHHHH-----hcCCcEEEEECCCCCH-
Confidence 4689999999999999999999999876 45555321 1222222211 1235789999999988
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEee
Q 042694 179 LGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVST 241 (554)
Q Consensus 179 lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST 241 (554)
++.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||
T Consensus 78 -----~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 78 -----DAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp -----HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 77666655 89999999997542 3467888999999999999988653 13458999999
Q ss_pred ceec
Q 042694 242 AYVN 245 (554)
Q Consensus 242 ~~v~ 245 (554)
....
T Consensus 153 ~~~~ 156 (285)
T 3sc4_A 153 PIRL 156 (285)
T ss_dssp CCCC
T ss_pred hhhc
Confidence 7543
No 279
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.38 E-value=4.8e-12 Score=126.59 Aligned_cols=127 Identities=16% Similarity=0.082 Sum_probs=88.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||++++++|++.|. +|++..+. ..+...+.... ....++.++.+|++++ .+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~Dl~~~-----~~~ 77 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI---MVVLTCRDVTKGHEAVEKLKN----SNHENVVFHQLDVTDP-----IAT 77 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHT----TTCCSEEEEECCTTSC-----HHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh----cCCCceEEEEccCCCc-----HHH
Confidence 5689999999999999999999999876 45555432 22222222211 1235789999999986 244
Q ss_pred HHHHh-------cCccEEEEcCCCCCc-------------------------------------hhhHHHHHHHhchHHH
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF-------------------------------------DERYDIAIDINTRGPC 221 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~-------------------------------------~~~~~~~~~~Nv~gt~ 221 (554)
.+.+. ..+|++||+||.... .+.++..+++|+.|+.
T Consensus 78 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 157 (311)
T 3o26_A 78 MSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVK 157 (311)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHH
Confidence 44333 379999999997632 2346677999999999
Q ss_pred HHHHHHHHc---CCCceEEEEeeceecc
Q 042694 222 RLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 222 ~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
.+++.+... .+..++|++||.....
T Consensus 158 ~l~~~~~~~l~~~~~~~IV~isS~~~~~ 185 (311)
T 3o26_A 158 SVTEVLIPLLQLSDSPRIVNVSSSTGSL 185 (311)
T ss_dssp HHHHHHHHHHTTSSSCEEEEECCGGGSG
T ss_pred HHHHHhhHhhccCCCCeEEEEecCCccc
Confidence 999887542 2446999999976543
No 280
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.38 E-value=6e-12 Score=123.51 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=89.3
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+|||| +|+||++++++|++.|. +|++.++..-+.+.+.... ...++.++.+|++++ ++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 70 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLRLIQRITDR-----LPAKAPLLELDVQNE------EH 70 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEECSCHHHHHHHHTT-----SSSCCCEEECCTTCH------HH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecChHHHHHHHHHh-----cCCCceEEEccCCCH------HH
Confidence 46899999999 99999999999999876 4555543221111221111 123677899999987 77
Q ss_pred HHHHhc----------CccEEEEcCCCCC--------c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeec
Q 042694 186 ADVIAK----------EVDVIVNSAANTT--------F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~~----------~vdiViH~AA~v~--------~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~ 242 (554)
.+.+.+ .+|++||+||... + .+.++..+++|+.|+..+++.+... .+-.++|++||.
T Consensus 71 v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~ 150 (269)
T 2h7i_A 71 LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFD 150 (269)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCc
Confidence 666655 7999999999754 1 3467788999999999999999752 112489999986
Q ss_pred ee
Q 042694 243 YV 244 (554)
Q Consensus 243 ~v 244 (554)
..
T Consensus 151 ~~ 152 (269)
T 2h7i_A 151 PS 152 (269)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 281
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.35 E-value=5.1e-12 Score=123.38 Aligned_cols=124 Identities=17% Similarity=0.231 Sum_probs=86.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+++||||+|+||++++++|++.|. +|++.++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 68 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA---TVYITGRHLDTLRVVAQEAQS-----LGGQCVPVVCDSSQE------SE 68 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----HSSEEEEEECCTTSH------HH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHH-----cCCceEEEECCCCCH------HH
Confidence 4678999999999999999999999886 45555432 22222222110 134788999999987 65
Q ss_pred HHHHh--------cCccEEEEcCC--CC--------Cc----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEe
Q 042694 186 ADVIA--------KEVDVIVNSAA--NT--------TF----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVS 240 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA--~v--------~~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vS 240 (554)
.+.+. ..+|++||+|+ .. .+ .+.++...++|+.|+..+.+.+.. + .+..++|++|
T Consensus 69 v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is 148 (260)
T 2qq5_A 69 VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVIS 148 (260)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEEC
T ss_pred HHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEc
Confidence 55443 35799999994 21 11 246778899999999888877653 1 2456899999
Q ss_pred eceec
Q 042694 241 TAYVN 245 (554)
Q Consensus 241 T~~v~ 245 (554)
|....
T Consensus 149 S~~~~ 153 (260)
T 2qq5_A 149 SPGSL 153 (260)
T ss_dssp CGGGT
T ss_pred Chhhc
Confidence 97653
No 282
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.34 E-value=1.5e-11 Score=125.03 Aligned_cols=125 Identities=19% Similarity=0.286 Sum_probs=92.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------HHHHHHHcCCchhhhccCcEEEEEccCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------FKCLKQTYGKSYQAFMLSKLVPAVGNVCENN 178 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~ 178 (554)
+++|+||||||+|.||++++++|++.|. +|+++++.. .+.+.+... ....++.++.+|++++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~l~~~l~~~~~~~~-----~~g~~~~~~~~Dv~d~- 113 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGA---NIVIAAKTAQPHPKLLGTIYTAAEEIE-----AVGGKALPCIVDVRDE- 113 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHHH-----HTTCEEEEEECCTTCH-
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCC---EEEEEECChhhhhhhHHHHHHHHHHHH-----hcCCeEEEEEccCCCH-
Confidence 6789999999999999999999999876 455543211 122222211 1235788999999988
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEee
Q 042694 179 LGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVST 241 (554)
Q Consensus 179 lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST 241 (554)
+..+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++++... .+..++|++||
T Consensus 114 -----~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 188 (346)
T 3kvo_A 114 -----QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP 188 (346)
T ss_dssp -----HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 76666654 89999999997542 3567899999999999999998542 24469999999
Q ss_pred ceecc
Q 042694 242 AYVNG 246 (554)
Q Consensus 242 ~~v~~ 246 (554)
.....
T Consensus 189 ~~~~~ 193 (346)
T 3kvo_A 189 PLNLN 193 (346)
T ss_dssp CCCCC
T ss_pred HHHcC
Confidence 76543
No 283
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.34 E-value=5.2e-12 Score=122.85 Aligned_cols=224 Identities=14% Similarity=0.091 Sum_probs=124.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||++++++|++.|. +|+++++. ..+.+.+ ... ...++..+ |..+. ++..+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~-l~~-----~~~~~~~~--d~~~v-----~~~~~ 64 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQKDELEA-FAE-----TYPQLKPM--SEQEP-----AELIE 64 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHHHHHH-HHH-----HCTTSEEC--CCCSH-----HHHHH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH-HHh-----cCCcEEEE--CHHHH-----HHHHH
Confidence 36899999999999999999999876 56665432 1222221 100 11233333 32221 12222
Q ss_pred HHh---cCccEEEEcCCCC-Cc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccceee
Q 042694 188 VIA---KEVDVIVNSAANT-TF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 188 ~l~---~~vdiViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~~i~ 253 (554)
.+. ..+|++||+||.. .. .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 65 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 139 (254)
T 1zmt_A 65 AVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----- 139 (254)
T ss_dssp HHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----
T ss_pred HHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----
Confidence 222 3799999999976 31 2467889999999999999988531 245699999997654321
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc-
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF- 332 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~- 332 (554)
+....|...+... ..+++.++.+.. ..|+.+.+++||.|+|+....+
T Consensus 140 -----------------------~~~~~Y~~sK~a~--------~~~~~~la~e~~-~~gi~v~~v~PG~v~~~~~~~~~ 187 (254)
T 1zmt_A 140 -----------------------KELSTYTSARAGA--------CTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFY 187 (254)
T ss_dssp -----------------------TTCHHHHHHHHHH--------HHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSC
T ss_pred -----------------------CCchHHHHHHHHH--------HHHHHHHHHHhh-hcCcEEEEEecCccccccccccC
Confidence 1111121111111 123344443332 2489999999999977543111
Q ss_pred -cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 333 -SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 333 -~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+..... ..... ....... + ...+...+|+|++++.++..... ...+.++++.++
T Consensus 188 ~T~~~~~---~~~~~----~~~~~~~---p--~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~~~vdgG 242 (254)
T 1zmt_A 188 PTEPWKT---NPEHV----AHVKKVT---A--LQRLGTQKELGELVAFLASGSCD--YLTGQVFWLAGG 242 (254)
T ss_dssp BHHHHTT---CHHHH----HHHHHHS---S--SSSCBCHHHHHHHHHHHHTTSCG--GGTTCEEEESTT
T ss_pred CCccccc---ChHHH----HHHhccC---C--CCCCcCHHHHHHHHHHHhCcccC--CccCCEEEECCC
Confidence 000000 00000 0000000 1 11356789999999888764321 123578988776
No 284
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.33 E-value=2.5e-11 Score=127.75 Aligned_cols=216 Identities=19% Similarity=0.173 Sum_probs=135.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++++++||||+|.||+++++.|++.|. +|++++.. ..+.+.+.... .++.++.+|++++ +..
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga---~Vvl~~r~~~~~~l~~~~~~-------~~~~~~~~Dvtd~------~~v 274 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGA---TVVAIDVDGAAEDLKRVADK-------VGGTALTLDVTAD------DAV 274 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECGGGHHHHHHHHHH-------HTCEEEECCTTST------THH
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCC---EEEEEeCCccHHHHHHHHHH-------cCCeEEEEecCCH------HHH
Confidence 5789999999999999999999999875 56665432 22333322211 1356899999998 565
Q ss_pred HHHhc--------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 187 DVIAK--------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 187 ~~l~~--------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
+.+.+ .+|+|||+|+.... .+.++..+++|+.|+.++.+++... .+..+||++||.......
T Consensus 275 ~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~ 354 (454)
T 3u0b_A 275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN 354 (454)
T ss_dssp HHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC
Confidence 55543 49999999998643 3568899999999999999999763 145699999997653321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEcccee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
. .. .. |..+|. +++.++.+.. ..|+++..+.||.|
T Consensus 355 ~----------------------------g~------~~------YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v 393 (454)
T 3u0b_A 355 R----------------------------GQ------TN------YATTKAGMIGLAEALAPVLA-DKGITINAVAPGFI 393 (454)
T ss_dssp T----------------------------TC------HH------HHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSB
T ss_pred C----------------------------CC------HH------HHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcc
Confidence 1 00 11 222233 4455544433 35899999999998
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+.....+.... . ...... ....+...+|+++++..++.... .--.++++++.++
T Consensus 394 ~T~~~~~~~~~~~------~----~~~~~~--------~l~r~g~pedvA~~v~fL~s~~a--~~itG~~i~vdGG 449 (454)
T 3u0b_A 394 ETKMTEAIPLATR------E----VGRRLN--------SLFQGGQPVDVAELIAYFASPAS--NAVTGNTIRVCGQ 449 (454)
T ss_dssp CC----------C------H----HHHHSB--------TTSSCBCHHHHHHHHHHHHCGGG--TTCCSCEEEESSS
T ss_pred cChhhhhcchhhH------H----HHHhhc--------cccCCCCHHHHHHHHHHHhCCcc--CCCCCcEEEECCc
Confidence 6543221111000 0 000000 01123467899999988775433 1234678888776
No 285
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.32 E-value=1.8e-11 Score=120.49 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=91.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------HHHHHHHcCCchhhhccCcEEEEEccCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------FKCLKQTYGKSYQAFMLSKLVPAVGNVCENN 178 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~ 178 (554)
+++|+++||||+|.||++++++|++.|. +|++.++.. .+.+.+... ....++.++.+|++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~- 74 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA---NVAIAAKSAVANPKLPGTIHSAAAAVN-----AAGGQGLALKCDIREE- 74 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCSCCTTSCCCHHHHHHHHH-----HHTSEEEEEECCTTCH-
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeccchhhhhhHHHHHHHHHHHH-----hcCCeEEEEeCCCCCH-
Confidence 4689999999999999999999999886 455543211 222222111 1245788999999987
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEee
Q 042694 179 LGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVST 241 (554)
Q Consensus 179 lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST 241 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|++||
T Consensus 75 -----~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 149 (274)
T 3e03_A 75 -----DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP 149 (274)
T ss_dssp -----HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence 76666654 79999999997532 3467889999999999999988642 23468999999
Q ss_pred ceecc
Q 042694 242 AYVNG 246 (554)
Q Consensus 242 ~~v~~ 246 (554)
.....
T Consensus 150 ~~~~~ 154 (274)
T 3e03_A 150 PPSLN 154 (274)
T ss_dssp CCCCC
T ss_pred hHhcC
Confidence 76543
No 286
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.30 E-value=3.1e-11 Score=121.39 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=82.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----------hhHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
+++|+|+||||+|+||+++++.|++.|. +|++.+. ...+.+.+.... .... +.+|+++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga---~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~-----~~~~---~~~D~~~ 75 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGK---AVANYDS 75 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCE---EEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCcccccccCCHHHHHHHHHHHHh-----hCCe---EEEeCCC
Confidence 4689999999999999999999999886 4555421 112222221110 0111 2478887
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEE
Q 042694 177 NNLGLEEDLADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQV 239 (554)
Q Consensus 177 ~~lGLs~~~~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~v 239 (554)
. ++.+.+. .++|++||+||.... .+.++..+++|+.|+..+.+++... .+..++|++
T Consensus 76 ~------~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~v 149 (319)
T 1gz6_A 76 V------EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMT 149 (319)
T ss_dssp G------GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred H------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 6 4433332 379999999997542 2467889999999999998887431 245799999
Q ss_pred eecee
Q 042694 240 STAYV 244 (554)
Q Consensus 240 ST~~v 244 (554)
||...
T Consensus 150 sS~~~ 154 (319)
T 1gz6_A 150 ASASG 154 (319)
T ss_dssp CCHHH
T ss_pred CChhh
Confidence 99644
No 287
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.29 E-value=2.5e-11 Score=118.36 Aligned_cols=126 Identities=16% Similarity=0.117 Sum_probs=89.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHh---hCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILR---TVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~---~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
+++|+++||||+|+||++++++|++ .|. +|+++++. ..+.+.+.... .....++.++.+|++++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~---~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~~~----- 72 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSESMLRQLKEELGA---QQPDLKVVLAAADLGTE----- 72 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHHHHHHHHHHHHH---HCTTSEEEEEECCTTSH-----
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---eEEEEeCCHHHHHHHHHHHHh---hCCCCeEEEEecCCCCH-----
Confidence 4689999999999999999999998 665 55655432 22222222110 00134788999999987
Q ss_pred HHHHHHHhc---------Ccc--EEEEcCCCCC----------chhhHHHHHHHhchHHHHHHHHHHHcC-----CCceE
Q 042694 183 EDLADVIAK---------EVD--VIVNSAANTT----------FDERYDIAIDINTRGPCRLMEFAKQCN-----KLKLF 236 (554)
Q Consensus 183 ~~~~~~l~~---------~vd--iViH~AA~v~----------~~~~~~~~~~~Nv~gt~~ll~la~~~~-----~~k~~ 236 (554)
++.+.+.+ .+| ++||+||... -.+.++..+++|+.|+..+++.+...- +..++
T Consensus 73 -~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~i 151 (259)
T 1oaa_A 73 -AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV 151 (259)
T ss_dssp -HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred -HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceE
Confidence 66555542 468 9999999742 125678899999999999999997531 23479
Q ss_pred EEEeeceec
Q 042694 237 VQVSTAYVN 245 (554)
Q Consensus 237 v~vST~~v~ 245 (554)
|++||...+
T Consensus 152 v~isS~~~~ 160 (259)
T 1oaa_A 152 VNISSLCAL 160 (259)
T ss_dssp EEECCGGGT
T ss_pred EEEcCchhc
Confidence 999998664
No 288
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.25 E-value=3.1e-10 Score=109.17 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=133.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||++-||+.+++.|++.|. +|++.+.. -+++.+... ...++..+.+|++++ ++.+.+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga---~V~~~~~~-~~~~~~~~~------~~~~~~~~~~Dv~~~------~~v~~~ 65 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD---KVCFIDID-EKRSADFAK------ERPNLFYFHGDVADP------LTLKKF 65 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESC-HHHHHHHHT------TCTTEEEEECCTTSH------HHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCC-HHHHHHHHH------hcCCEEEEEecCCCH------HHHHHH
Confidence 47899999999999999999999886 45555432 122222221 234788999999998 666666
Q ss_pred hc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccceee
Q 042694 190 AK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 190 ~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~~i~ 253 (554)
.+ ++|++||+|+.... .+.++..+++|+.|+..+.+.+..+ ++--++|.+||.......
T Consensus 66 v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~----- 140 (247)
T 3ged_A 66 VEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE----- 140 (247)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC-----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC-----
Confidence 43 79999999987543 3578999999999999998887542 123589999997553321
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS 333 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~ 333 (554)
+....|...+..+ ..+++.++.+.. . ++.+..+-||.|-.+..+
T Consensus 141 -----------------------~~~~~Y~asKaal--------~~ltk~lA~ela-~-~IrVN~I~PG~i~t~~~~--- 184 (247)
T 3ged_A 141 -----------------------PDSEAYASAKGGI--------VALTHALAMSLG-P-DVLVNCIAPGWINVTEQQ--- 184 (247)
T ss_dssp -----------------------TTCHHHHHHHHHH--------HHHHHHHHHHHT-T-TSEEEEEEECSBCCCC-----
T ss_pred -----------------------CCCHHHHHHHHHH--------HHHHHHHHHHHC-C-CCEEEEEecCcCCCCCcH---
Confidence 1111122222222 145666665553 3 799999999988432211
Q ss_pred ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 334 GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+.+ .... .+ |- --+.-.+|+|++++-++.... -.++++.+.++
T Consensus 185 ~~~~------~~~~-----~~------Pl--~R~g~pediA~~v~fL~s~~~----iTG~~i~VDGG 228 (247)
T 3ged_A 185 EFTQ------EDCA-----AI------PA--GKVGTPKDISNMVLFLCQQDF----ITGETIIVDGG 228 (247)
T ss_dssp -CCH------HHHH-----TS------TT--SSCBCHHHHHHHHHHHHHCSS----CCSCEEEESTT
T ss_pred HHHH------HHHh-----cC------CC--CCCcCHHHHHHHHHHHHhCCC----CCCCeEEECcC
Confidence 1110 0000 00 00 013346889999988875432 24678888776
No 289
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.24 E-value=2.9e-11 Score=128.16 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=114.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++++|||||||.||.++++.|++.|.. +|++..+. ..+.+.++... ...++.++.+|++++ +
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~--~vvl~~R~~~~~~~~~~l~~~l~~-----~g~~v~~~~~Dvtd~------~ 305 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA--HLVLTSRRGADAPGAAELRAELEQ-----LGVRVTIAACDAADR------E 305 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHH-----TTCEEEEEECCTTCH------H
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc--EEEEEeCCCCChHHHHHHHHHHHh-----cCCeEEEEEccCCCH------H
Confidence 389999999999999999999987753 56655331 12333332211 245889999999998 7
Q ss_pred HHHHHhc------CccEEEEcCCCC-Cc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc
Q 042694 185 LADVIAK------EVDVIVNSAANT-TF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 185 ~~~~l~~------~vdiViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~ 250 (554)
..+.+++ .+|+|||+|+.. .. .+.++..+++|+.|+.++.+++... .+.+||++||....-...+
T Consensus 306 ~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~~g 384 (496)
T 3mje_A 306 ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGSGG 384 (496)
T ss_dssp HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTCTT
T ss_pred HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCCCC
Confidence 7777765 489999999976 22 3467889999999999999999874 7789999999755332110
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
. . .|..+|.+.+.+++... ..|++++.+.||.+.+
T Consensus 385 ----------------------------~------~------~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~ 419 (496)
T 3mje_A 385 ----------------------------Q------P------GYAAANAYLDALAEHRR-SLGLTASSVAWGTWGE 419 (496)
T ss_dssp ----------------------------C------H------HHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESS
T ss_pred ----------------------------c------H------HHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccC
Confidence 0 1 12223444455555433 3589999999998854
No 290
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.23 E-value=1.7e-10 Score=111.52 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=138.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++||+++||||++-||+.+++.|.+.|. +|++.+. +..+.+.++... ...++.++.+|++++ ++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga---~Vv~~~~~~~~~~~~~~~i~~-----~g~~~~~~~~Dvt~~------~~ 70 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS---IVVAVELLEDRLNQIVQELRG-----MGKEVLGVKADVSKK------KD 70 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTSH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 6899999999999999999999999886 4555543 223333332211 345788999999998 77
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||... + .+.++..+++|+.|+..+.+.+.. | .+--++|++||......
T Consensus 71 v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~ 150 (254)
T 4fn4_A 71 VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG 150 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC
Confidence 776653 7999999999642 2 247889999999999999888764 2 23458999999755322
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
. +....|...+..+ ..+++.++.+... .|+.+..+-||.|-.+
T Consensus 151 ~----------------------------~~~~~Y~asKaal--------~~ltr~lA~ela~-~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 151 G----------------------------FAGAPYTVAKHGL--------IGLTRSIAAHYGD-QGIRAVAVLPGTVKTN 193 (254)
T ss_dssp S----------------------------SSCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCSS
T ss_pred C----------------------------CCChHHHHHHHHH--------HHHHHHHHHHhhh-hCeEEEEEEeCCCCCc
Confidence 1 1111122222221 1356666655544 4899999999988432
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... +.... ..... .......+ +- --+.-.+|+|++++-++..... --.++++.+.++
T Consensus 194 ~~~---~~~~~----~~~~~---~~~~~~~~--~~--~R~g~pediA~~v~fLaSd~a~--~iTG~~i~VDGG 250 (254)
T 4fn4_A 194 IGL---GSSKP----SELGM---RTLTKLMS--LS--SRLAEPEDIANVIVFLASDEAS--FVNGDAVVVDGG 250 (254)
T ss_dssp CTT---SCSSC----CHHHH---HHHHHHHT--TC--CCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ccc---cccCC----cHHHH---HHHHhcCC--CC--CCCcCHHHHHHHHHHHhCchhc--CCcCCEEEeCCC
Confidence 211 00000 00000 00000000 00 0133468999998888765332 234678887665
No 291
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.21 E-value=2.8e-10 Score=109.79 Aligned_cols=120 Identities=13% Similarity=0.035 Sum_probs=78.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-c--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-N--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
||+|+||||+|+||++++++|++.|. +|+++ + +. .+++.+.... . ....+. |..+. ++..
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~r~-~~~~~~~~~~-----~-~~~~~~--~~~~v-----~~~~ 63 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY---TVVCHDASFAD-AAERQRFESE-----N-PGTIAL--AEQKP-----ERLV 63 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGS-HHHHHHHHHH-----S-TTEEEC--CCCCG-----GGHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCcCC-HHHHHHHHHH-----h-CCCccc--CHHHH-----HHHH
Confidence 57899999999999999999999876 56666 3 32 1222221110 1 111111 22221 1333
Q ss_pred HHHhc---CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 187 DVIAK---EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~~---~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
+.+.+ .+|++||+|+.... .+.++..+++|+.|+..+++.+... .+..++|++||...+.
T Consensus 64 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 139 (244)
T 1zmo_A 64 DATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK 139 (244)
T ss_dssp HHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC
Confidence 44432 79999999997543 2567889999999999999988531 2457899999976543
No 292
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.20 E-value=1.6e-10 Score=111.74 Aligned_cols=224 Identities=14% Similarity=0.103 Sum_probs=138.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++||+++||||++-||+.+++.|++.|. +|++.+.. ..+...++... ...++..+.+|++++ ++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~l~~-----~g~~~~~~~~Dv~~~------~~ 72 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA---RVILNDIRATLLAESVDTLTR-----KGYDAHGVAFDVTDE------LA 72 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHHHHHHHHHHHHH-----TTCCEEECCCCTTCH------HH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEeeCCCH------HH
Confidence 5899999999999999999999999886 56665532 22222222111 235788999999998 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. | .+--++|.+||......
T Consensus 73 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~ 152 (255)
T 4g81_D 73 IEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA 152 (255)
T ss_dssp HHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB
T ss_pred HHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC
Confidence 666653 69999999997543 357899999999999999887743 2 23458999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....|...+..+ ..+++.++.+... .|+.+..+-||.|-.+
T Consensus 153 ~~----------------------------~~~~Y~asKaal--------~~ltr~lA~ela~-~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 153 RP----------------------------TVAPYTAAKGGI--------KMLTCSMAAEWAQ-FNIQTNAIGPGYILTD 195 (255)
T ss_dssp CT----------------------------TCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCG
T ss_pred CC----------------------------CchhHHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEeeCCCCCc
Confidence 11 111122222211 1356666655544 4899999999998543
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
... ...+.-.....+ .... |- --+.-.+|+|++++-++..... --.++++.+.++
T Consensus 196 ~~~---~~~~~~~~~~~~-----~~~~------Pl--~R~g~pediA~~v~fL~S~~a~--~iTG~~i~VDGG 250 (255)
T 4g81_D 196 MNT---ALIEDKQFDSWV-----KSST------PS--QRWGRPEELIGTAIFLSSKASD--YINGQIIYVDGG 250 (255)
T ss_dssp GGH---HHHTCHHHHHHH-----HHHS------TT--CSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred hhh---cccCCHHHHHHH-----HhCC------CC--CCCcCHHHHHHHHHHHhCchhC--CCcCCEEEECCC
Confidence 221 111100000000 0000 00 0133457889998887754331 234578877665
No 293
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.19 E-value=1.9e-10 Score=123.16 Aligned_cols=127 Identities=9% Similarity=0.083 Sum_probs=94.9
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchh---------------HHHHHHHcCCchhhhccCcEEEE
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAEL---------------FKCLKQTYGKSYQAFMLSKLVPA 170 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~---------------~~~l~~~~~~~~~~~~~~kv~~v 170 (554)
+-+++++|||||+|.||.++++.|.+.+.. ++++. .+.. .+.+.++.. ....++.++
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~g~~v~~~ 320 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-----DLGATATVV 320 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHHHHH-----HHTCEEEEE
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHHHHH-----hcCCEEEEE
Confidence 456899999999999999999999998764 45555 3321 112222111 124578999
Q ss_pred EccCCCCCCCCCHHHHHHHhcC------ccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCC----C
Q 042694 171 VGNVCENNLGLEEDLADVIAKE------VDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNK----L 233 (554)
Q Consensus 171 ~GDl~~~~lGLs~~~~~~l~~~------vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~----~ 233 (554)
.+|++++ +..+.+++. +|+|||+||.... .+.++..+++|+.|+.++.+++..... .
T Consensus 321 ~~Dvtd~------~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~ 394 (525)
T 3qp9_A 321 TCDLTDA------EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRP 394 (525)
T ss_dssp ECCTTSH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CC
T ss_pred ECCCCCH------HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Confidence 9999998 787777754 7999999997542 346788999999999999999987421 6
Q ss_pred ceEEEEeeceecc
Q 042694 234 KLFVQVSTAYVNG 246 (554)
Q Consensus 234 k~~v~vST~~v~~ 246 (554)
..||++||.....
T Consensus 395 ~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 395 PVLVLFSSVAAIW 407 (525)
T ss_dssp CEEEEEEEGGGTT
T ss_pred CEEEEECCHHHcC
Confidence 7999999976543
No 294
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.18 E-value=4.5e-10 Score=107.39 Aligned_cols=222 Identities=11% Similarity=0.083 Sum_probs=137.5
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+.|+||+++||||++-||+.+++.|.+.|. +|++.+... +.+. .....++..+.+|++++ ++
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~-~~~~--------~~~~~~~~~~~~Dv~~~------~~ 68 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGA---EVVALGLDA-DGVH--------APRHPRIRREELDITDS------QR 68 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESST-TSTT--------SCCCTTEEEEECCTTCH------HH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHh--------hhhcCCeEEEEecCCCH------HH
Confidence 357899999999999999999999999886 455554321 1111 11345889999999987 77
Q ss_pred HHHHhc---CccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccceeecc
Q 042694 186 ADVIAK---EVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRGKVMEK 255 (554)
Q Consensus 186 ~~~l~~---~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~~i~E~ 255 (554)
.+.+.+ ++|++||+|+.... .+.++..+++|+.|+..+.+.+..+ .+--++|.+||.......
T Consensus 69 v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~------- 141 (242)
T 4b79_A 69 LQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS------- 141 (242)
T ss_dssp HHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC-------
T ss_pred HHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC-------
Confidence 777765 79999999997653 2468899999999999998887643 122589999997553221
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
+....|...+..+ ..+++.++.+... .|+.+..+-||.|-.+..+....
T Consensus 142 ---------------------~~~~~Y~asKaav--------~~ltr~lA~Ela~-~gIrVNaV~PG~i~T~m~~~~~~- 190 (242)
T 4b79_A 142 ---------------------ADRPAYSASKGAI--------VQLTRSLACEYAA-ERIRVNAIAPGWIDTPLGAGLKA- 190 (242)
T ss_dssp ---------------------SSCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCCC-----CC-
T ss_pred ---------------------CCCHHHHHHHHHH--------HHHHHHHHHHhhh-cCeEEEEEEeCCCCChhhhcccC-
Confidence 1111122222222 1356666655544 48999999999885432211110
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+...... ..... |- --+.-.+|++++++-++..... --.++++.+.++
T Consensus 191 --~~~~~~~--------~~~~~---Pl--gR~g~peeiA~~v~fLaSd~a~--~iTG~~l~VDGG 238 (242)
T 4b79_A 191 --DVEATRR--------IMQRT---PL--ARWGEAPEVASAAAFLCGPGAS--FVTGAVLAVDGG 238 (242)
T ss_dssp --CHHHHHH--------HHHTC---TT--CSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred --CHHHHHH--------HHhcC---CC--CCCcCHHHHHHHHHHHhCchhc--CccCceEEECcc
Confidence 0000000 00000 00 0133468899998887754331 234577877665
No 295
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.16 E-value=3.7e-10 Score=110.25 Aligned_cols=167 Identities=19% Similarity=0.183 Sum_probs=114.8
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+-++||+++||||++-||+.+++.|++.|. +|++.++. ..+...++ ...+...+.+|++++
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~--------~g~~~~~~~~Dv~~~------ 87 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA---RVFITGRRKDVLDAAIAE--------IGGGAVGIQADSANL------ 87 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH--------HCTTCEEEECCTTCH------
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHH--------cCCCeEEEEecCCCH------
Confidence 347899999999999999999999999886 45555432 22222222 235678899999988
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeeceecccc
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v~~~~ 248 (554)
++.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. +.+-.++|.+||.......
T Consensus 88 ~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~ 167 (273)
T 4fgs_A 88 AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT 167 (273)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC
Confidence 77666653 69999999997543 357899999999999999998864 2233478899886543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
+....|...+..+ ..+++.++.+... .|+.+..+-||.|-.
T Consensus 168 ----------------------------~~~~~Y~asKaav--------~~ltr~lA~Ela~-~gIrVN~V~PG~i~T 208 (273)
T 4fgs_A 168 ----------------------------PAFSVYAASKAAL--------RSFARNWILDLKD-RGIRINTLSPGPTET 208 (273)
T ss_dssp ----------------------------TTCHHHHHHHHHH--------HHHHHHHHHHTTT-SCEEEEEEEECSBCC
T ss_pred ----------------------------CCchHHHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEeeCCCCC
Confidence 1111122222221 1356666655543 489999999998843
No 296
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.14 E-value=1.3e-09 Score=105.75 Aligned_cols=228 Identities=9% Similarity=0.023 Sum_probs=135.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++||+++||||++-||+.+++.|.+.|. +|++.++ +..+.+.+.. ....++..+.+|++++ ++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~r~~~~~~~~~~~~------~~~~~~~~~~~Dv~~~------~~ 69 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA---IPVVFARHAPDGAFLDALA------QRQPRATYLPVELQDD------AQ 69 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCCHHHHHHHH------HHCTTCEEEECCTTCH------HH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCcccHHHHHHHH------hcCCCEEEEEeecCCH------HH
Confidence 5799999999999999999999999876 4444432 2222221111 1234778899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+.+ ++|++||+||.... .+.++..+++|+.|+..+.+.+..+ .+--++|.+||.......
T Consensus 70 v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-- 147 (258)
T 4gkb_A 70 CRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ-- 147 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC--
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC--
Confidence 655543 79999999996431 3578899999999999998887542 112489999997653321
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~ 330 (554)
+....|...+..+ ..+++.++.+... .|+.+..+-||.|-.+..+
T Consensus 148 --------------------------~~~~~Y~asKaav--------~~ltr~lA~ela~-~gIrVN~V~PG~i~T~~~~ 192 (258)
T 4gkb_A 148 --------------------------GNTSGYCASKGAQ--------LALTREWAVALRE-HGVRVNAVIPAEVMTPLYR 192 (258)
T ss_dssp --------------------------SSCHHHHHHHHHH--------HHHHHHHHHHHGG-GTCEEEEEEECSBCCSCC-
T ss_pred --------------------------CCchHHHHHHHHH--------HHHHHHHHHHhcc-cCeEEEEEecCCCCChhHh
Confidence 1111122222222 1356666655544 4899999999998543221
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+............ ...... |- -.-+...+|+|++++-++..... --.++++.+.++
T Consensus 193 ---~~~~~~~~~~~~~~----~~~~~~---pl-g~R~g~peeiA~~v~fLaS~~a~--~iTG~~i~VDGG 249 (258)
T 4gkb_A 193 ---NWIATFEDPEAKLA----EIAAKV---PL-GRRFTTPDEIADTAVFLLSPRAS--HTTGEWLFVDGG 249 (258)
T ss_dssp -------------CHHH----HHHTTC---TT-TTSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred ---hhhhcccChHHHHH----HHHhcC---CC-CCCCcCHHHHHHHHHHHhCchhc--CccCCeEEECCC
Confidence 11111000000000 000000 00 01244568999998887755332 234678888776
No 297
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.11 E-value=7.6e-10 Score=106.02 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=113.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++||+++||||++-||+.+++.|.+.|. +|++.+...-+...+.... ...++..+.+|++++ +..+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~~~~~~~~-----~g~~~~~~~~Dv~d~------~~v~ 72 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAPDETLDIIAK-----DGGNASALLIDFADP------LAAK 72 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCCHHHHHHHHH-----TTCCEEEEECCTTST------TTTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcHHHHHHHHHH-----hCCcEEEEEccCCCH------HHHH
Confidence 6799999999999999999999999886 4555543221222221111 235788999999987 4444
Q ss_pred HHhc--CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeeceecccccceeec
Q 042694 188 VIAK--EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 188 ~l~~--~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v~~~~~~~i~E 254 (554)
.+.+ .+|+++|+|+.... .+.++..+++|+.|+..+.+.+.. | ++--++|.+||.......
T Consensus 73 ~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------ 146 (247)
T 4hp8_A 73 DSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------ 146 (247)
T ss_dssp TSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------
Confidence 4443 69999999997543 357899999999999999887643 3 234589999997553321
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
+....|...+..+ ..+++.++.+... .|+.+..+-||.|-.
T Consensus 147 ----------------------~~~~~Y~asKaav--------~~ltr~lA~Ela~-~gIrVNaV~PG~i~T 187 (247)
T 4hp8_A 147 ----------------------IRVPSYTAAKHGV--------AGLTKLLANEWAA-KGINVNAIAPGYIET 187 (247)
T ss_dssp ----------------------SSCHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECSBCS
T ss_pred ----------------------CCChHHHHHHHHH--------HHHHHHHHHHHhh-cCeEEEEEeeCCCCC
Confidence 1111122222222 1356666655544 489999999998844
No 298
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.11 E-value=3.2e-09 Score=103.13 Aligned_cols=225 Identities=13% Similarity=0.013 Sum_probs=135.0
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
++||+++||||+| =||+.+++.|.+.|.+ |++.+ .+..+.+.+.... ....++.++++|++++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~---Vvi~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~------ 70 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAK---LVFTYRKERSRKELEKLLEQ----LNQPEAHLYQIDVQSD------ 70 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCE---EEEEESSGGGHHHHHHHHGG----GTCSSCEEEECCTTCH------
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHh----cCCCcEEEEEccCCCH------
Confidence 5799999999886 6999999999998864 44443 2333444433321 1234788999999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
++.+.+.+ ++|+++|+|+.... .+.+....++|+.++..+.+.+... ++--++|++||...
T Consensus 71 ~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~ 150 (256)
T 4fs3_A 71 EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG 150 (256)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 66665543 79999999997542 2346677889999998888887643 23348999998754
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
.... +....|...+..+ ..+++.++.+... .|+.+..+-||.|
T Consensus 151 ~~~~----------------------------~~~~~Y~asKaal--------~~ltr~lA~Ela~-~gIrVN~V~PG~i 193 (256)
T 4fs3_A 151 EFAV----------------------------QNYNVMGVAKASL--------EANVKYLALDLGP-DNIRVNAISAGPI 193 (256)
T ss_dssp TSCC----------------------------TTTHHHHHHHHHH--------HHHHHHHHHHHGG-GTEEEEEEEECCC
T ss_pred ccCc----------------------------ccchhhHHHHHHH--------HHHHHHHHHHhCc-cCeEEEEEecCCC
Confidence 3221 1111122222221 1355666655543 4899999999988
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
-.+..+.....- ..... ..... |- --+...+|++++++-++..... --.++++.+.++
T Consensus 194 ~T~~~~~~~~~~-------~~~~~----~~~~~---Pl--~R~g~peevA~~v~fL~Sd~a~--~iTG~~i~VDGG 251 (256)
T 4fs3_A 194 RTLSAKGVGGFN-------TILKE----IKERA---PL--KRNVDQVEVGKTAAYLLSDLSS--GVTGENIHVDSG 251 (256)
T ss_dssp CSGGGTTCTTHH-------HHHHH----HHHHS---TT--SSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CChhhhhccCCH-------HHHHH----HHhcC---CC--CCCcCHHHHHHHHHHHhCchhc--CccCCEEEECcC
Confidence 543322111110 00000 00000 00 0133468899998887754331 224578877665
No 299
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.08 E-value=3e-09 Score=105.71 Aligned_cols=236 Identities=15% Similarity=0.106 Sum_probs=125.5
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcchh-HHHH---HH-HcCCchhhhc---c-CcEEEEEccCCC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAEL-FKCL---KQ-TYGKSYQAFM---L-SKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l---~~-~~~~~~~~~~---~-~kv~~v~GDl~~ 176 (554)
+++|+++||||+ |+||++++++|++.|. +|+++++.. .+.. +. ...+...+.. . .....+.+|+..
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence 467899999999 9999999999999876 456554221 1100 11 0000000000 0 112334444311
Q ss_pred C---CCCC-----------CHHHHHHHh-------cCccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHH
Q 042694 177 N---NLGL-----------EEDLADVIA-------KEVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEF 226 (554)
Q Consensus 177 ~---~lGL-----------s~~~~~~l~-------~~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~l 226 (554)
. ++.. ++++.+.+. ..+|++||+||... + .+.++..+++|+.|+..+++.
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 162 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence 0 0000 002222222 37999999998532 2 246788999999999999999
Q ss_pred HHHc-CCCceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCC-ChHHHHHHhhhccCCCCchHHHHHH
Q 042694 227 AKQC-NKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTL-DVENEMKLALESKEFSTDGEVAQKM 304 (554)
Q Consensus 227 a~~~-~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~k~~~~~k~~ae~l 304 (554)
+... .+-.++|++||....... +.. ..|...+..+. .+++.+
T Consensus 163 ~~~~m~~~g~iv~isS~~~~~~~----------------------------~~~~~~Y~asKaa~~--------~~~~~l 206 (297)
T 1d7o_A 163 FLPIMNPGGASISLTYIASERII----------------------------PGYGGGMSSAKAALE--------SDTRVL 206 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSCC----------------------------TTCTTTHHHHHHHHH--------HHHHHH
T ss_pred HHHHhccCceEEEEeccccccCC----------------------------CCcchHHHHHHHHHH--------HHHHHH
Confidence 9752 112589999997553321 110 11222222111 233444
Q ss_pred HhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHh
Q 042694 305 KGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH 384 (554)
Q Consensus 305 ~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~ 384 (554)
+.+.....|+.+..++||.|.++..... +..+ ........ .. + ...+..++++|++++.++...
T Consensus 207 a~e~~~~~gi~vn~v~PG~v~T~~~~~~-~~~~------~~~~~~~~-~~------p--~~r~~~pedvA~~v~~l~s~~ 270 (297)
T 1d7o_A 207 AFEAGRKQNIRVNTISAGPLGSRAAKAI-GFID------TMIEYSYN-NA------P--IQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp HHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHH------HHHHHHHH-HS------S--SCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHhCcccCcEEEEEeccccccchhhhc-cccH------HHHHHhhc-cC------C--CCCCCCHHHHHHHHHHHhCcc
Confidence 4333222489999999999976543211 0000 00000000 00 0 013467899999998876543
Q ss_pred cccCCCCCeEEEeeCC
Q 042694 385 GMIQKPDINVYQIASS 400 (554)
Q Consensus 385 ~~~~~~~~~vyn~~~~ 400 (554)
.. ...+.++++.++
T Consensus 271 ~~--~itG~~i~vdgG 284 (297)
T 1d7o_A 271 AS--AITGATIYVDNG 284 (297)
T ss_dssp GT--TCCSCEEEESTT
T ss_pred cc--CCCCCEEEECCC
Confidence 21 224678998876
No 300
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.06 E-value=1.6e-09 Score=118.45 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=81.5
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----------hhHHHHHHHcCCchhhhccCcEEEEEccCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVC 175 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~ 175 (554)
-+++|+++||||+|.||+++++.|++.|. +|++.+. ...+.+.++... .... +.+|++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga---~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-----~~~~---~~~D~~ 84 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGA---KVVVNDLGGTHSGDGASQRAADIVVDEIRK-----AGGE---AVADYN 84 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEC--------------CHHHHHHHHHH-----TTCC---EEECCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcccccccCCHHHHHHHHHHHHH-----hCCe---EEEEeC
Confidence 36899999999999999999999999886 5555432 112222221110 1112 236888
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEE
Q 042694 176 ENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQ 238 (554)
Q Consensus 176 ~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~ 238 (554)
+. ++.+.+.+ .+|++||+||.... .+.++..+++|+.|+..+.+++.. + .+..++|+
T Consensus 85 d~------~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~ 158 (613)
T 3oml_A 85 SV------IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIM 158 (613)
T ss_dssp CG------GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 76 55555554 68999999997542 357889999999999999998843 1 24469999
Q ss_pred Eeecee
Q 042694 239 VSTAYV 244 (554)
Q Consensus 239 vST~~v 244 (554)
+||...
T Consensus 159 isS~a~ 164 (613)
T 3oml_A 159 TSSNSG 164 (613)
T ss_dssp ECCHHH
T ss_pred ECCHHH
Confidence 999754
No 301
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.00 E-value=4.3e-09 Score=102.28 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=85.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++||+++||||++-||+.+++.|++.|. +|++.++.. .+ ...+...+++|++++ ++.+
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~--------~~-----~~~~~~~~~~Dv~~~------~~v~ 66 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGA---QVLTTARAR--------PE-----GLPEELFVEADLTTK------EGCA 66 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTC---EEEEEESSC--------CT-----TSCTTTEEECCTTSH------HHHH
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCC---EEEEEECCc--------hh-----CCCcEEEEEcCCCCH------HHHH
Confidence 5799999999999999999999999886 455554321 00 112334689999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
.+.+ .+|++||+|+... + .+.++..+++|+.|+..+.+.+.. + .+-.++|++||...
T Consensus 67 ~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~ 142 (261)
T 4h15_A 67 IVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR 142 (261)
T ss_dssp HHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred HHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence 5543 6999999998532 2 357889999999999988887753 2 23458999998754
No 302
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=98.85 E-value=2.8e-08 Score=99.59 Aligned_cols=135 Identities=13% Similarity=0.055 Sum_probs=78.9
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcchh-HHHH---HHHcC-C---chhhhc-cCcEEEEEccCC-
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCL---KQTYG-K---SYQAFM-LSKLVPAVGNVC- 175 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l---~~~~~-~---~~~~~~-~~kv~~v~GDl~- 175 (554)
+++|+++|||| +|.||++++++|++.|. +|+++++.. .++. +.... . ...... ...+..+.+|+.
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA---RVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTC---EEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCC---EEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence 46899999999 89999999999999875 566654321 0110 00000 0 000000 001233444432
Q ss_pred -CCC-CCC-----------CHHHHHHHh-------cCccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHH
Q 042694 176 -ENN-LGL-----------EEDLADVIA-------KEVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEF 226 (554)
Q Consensus 176 -~~~-lGL-----------s~~~~~~l~-------~~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~l 226 (554)
++. +.. +++..+.+. ..+|++||+||... + .+.++..+++|+.|+..+++.
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 163 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH 163 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 211 000 012223222 37999999998542 2 246788999999999999999
Q ss_pred HHHc-CCCceEEEEeeceec
Q 042694 227 AKQC-NKLKLFVQVSTAYVN 245 (554)
Q Consensus 227 a~~~-~~~k~~v~vST~~v~ 245 (554)
+... .+-.++|++||....
T Consensus 164 ~~~~m~~~g~Iv~isS~~~~ 183 (315)
T 2o2s_A 164 FGPIMNEGGSAVTLSYLAAE 183 (315)
T ss_dssp HSTTEEEEEEEEEEEEGGGT
T ss_pred HHHHHhcCCEEEEEeccccc
Confidence 8642 112589999997653
No 303
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=98.76 E-value=2.1e-08 Score=112.57 Aligned_cols=161 Identities=13% Similarity=0.113 Sum_probs=112.7
Q ss_pred ccCcEEEEecccccccHHHHHHHH-hhCCCccEEEEEcch-----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKIL-RTVPDVGKIFIINAE-----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL-~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
-.+++++||||+|-||+.+++.|. +.|. ++|+++.+. ..+.+.++.. ....++.++.+|++++
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~-----~~G~~v~~~~~Dvsd~---- 596 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQLT-----AYGAEVSLQACDVADR---- 596 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHHH-----HTTCEEEEEECCTTCH----
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHHH-----hcCCcEEEEEeecCCH----
Confidence 357899999999999999999998 6554 356655432 1222222211 1235789999999998
Q ss_pred CHHHHHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccc
Q 042694 182 EEDLADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 182 s~~~~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~ 248 (554)
++.+.+.+ .+|+|||+|+.... .+.++..+++|+.|+.++.+++. +.+ .||.+||....-..
T Consensus 597 --~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l-~iV~~SS~ag~~g~ 671 (795)
T 3slk_A 597 --ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV-ALVLFSSVSGVLGS 671 (795)
T ss_dssp --HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS-EEEEEEETHHHHTC
T ss_pred --HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC-EEEEEccHHhcCCC
Confidence 77777765 47999999997542 35788999999999999999883 456 89999997553321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
.+ . .. |..+|.+.+.++..... .|+++..+-||.+-
T Consensus 672 ~g----------------------------~------~~------YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~ 707 (795)
T 3slk_A 672 GG----------------------------Q------GN------YAAANSFLDALAQQRQS-RGLPTRSLAWGPWA 707 (795)
T ss_dssp SS----------------------------C------HH------HHHHHHHHHHHHHHHHH-TTCCEEEEEECCCS
T ss_pred CC----------------------------C------HH------HHHHHHHHHHHHHHHHH-cCCeEEEEECCeEC
Confidence 10 0 11 22334566777665544 48999999988774
No 304
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=98.74 E-value=1.6e-07 Score=94.63 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=85.1
Q ss_pred cCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEc-ch---hHHHHHHHcCCch-----hhhccCcEEEEEccCCCC
Q 042694 109 KAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIIN-AE---LFKCLKQTYGKSY-----QAFMLSKLVPAVGNVCEN 177 (554)
Q Consensus 109 ~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~-~~---~~~~l~~~~~~~~-----~~~~~~kv~~v~GDl~~~ 177 (554)
++|+++||||++ -||++++++|++.|.. |++.. .+ ...|-.+...... .......+..+.+|++..
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~---Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 77 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD 77 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCS
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccccc
Confidence 368999999874 8999999999998864 44332 22 2333322211100 011234578899999876
Q ss_pred CCC-CCHH-------------H----HHHHh---cCccEEEEcCCCC-----Cc----hhhHHHHHHHhchHHHHHHHHH
Q 042694 178 NLG-LEED-------------L----ADVIA---KEVDVIVNSAANT-----TF----DERYDIAIDINTRGPCRLMEFA 227 (554)
Q Consensus 178 ~lG-Ls~~-------------~----~~~l~---~~vdiViH~AA~v-----~~----~~~~~~~~~~Nv~gt~~ll~la 227 (554)
... ++++ + .+.+. ..+|++||+||.. .+ .+.++..+++|+.|+..+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 157 (329)
T 3lt0_A 78 TANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYF 157 (329)
T ss_dssp SGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 221 1111 2 22222 3799999999853 11 3468899999999999999988
Q ss_pred HHc-CCCceEEEEeecee
Q 042694 228 KQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 228 ~~~-~~~k~~v~vST~~v 244 (554)
... ..-.++|++||...
T Consensus 158 ~p~m~~~g~Iv~isS~~~ 175 (329)
T 3lt0_A 158 VNIMKPQSSIISLTYHAS 175 (329)
T ss_dssp GGGEEEEEEEEEEECGGG
T ss_pred HHHHhhCCeEEEEeCccc
Confidence 752 11148999998754
No 305
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=98.74 E-value=4e-08 Score=116.38 Aligned_cols=123 Identities=16% Similarity=0.165 Sum_probs=89.1
Q ss_pred ccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEE-cc--hhH----HHHHHHcCCchhhhccCcEEEEEccCCCCCC
Q 042694 108 LKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFII-NA--ELF----KCLKQTYGKSYQAFMLSKLVPAVGNVCENNL 179 (554)
Q Consensus 108 ~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~-~~--~~~----~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~l 179 (554)
+++|+++||||+|. ||+++++.|++.|. +|++. ++ ... +.+.+..+. ...++.++.+|++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA---~Vvl~~~R~~~~l~~~~~eL~~~~~~-----~g~~v~~v~~DVsd~-- 742 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQVTDYYQSIYAKYGA-----KGSTLIVVPFNQGSK-- 742 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTC---EEEEEESSCCHHHHHHHHHHHHHHCC-----TTCEEEEEECCTTCH--
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCHHHHHHHHHHHHHHhhc-----CCCeEEEEEecCCCH--
Confidence 56899999999999 99999999999875 55655 22 112 222222211 134788999999987
Q ss_pred CCCHHHHHHHhc-------------CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHHcCCC---
Q 042694 180 GLEEDLADVIAK-------------EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQCNKL--- 233 (554)
Q Consensus 180 GLs~~~~~~l~~-------------~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~~~~--- 233 (554)
++.+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.++..+.+
T Consensus 743 ----~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~ 818 (1887)
T 2uv8_A 743 ----QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR 818 (1887)
T ss_dssp ----HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC
T ss_pred ----HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC
Confidence 66665542 58999999997532 2457889999999999999988543332
Q ss_pred --ceEEEEeecee
Q 042694 234 --KLFVQVSTAYV 244 (554)
Q Consensus 234 --k~~v~vST~~v 244 (554)
.++|++||...
T Consensus 819 ~~G~IVnISS~ag 831 (1887)
T 2uv8_A 819 PAQVILPMSPNHG 831 (1887)
T ss_dssp CEEEEEEECSCTT
T ss_pred CCCEEEEEcChHh
Confidence 48999998643
No 306
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=98.73 E-value=4.9e-08 Score=97.94 Aligned_cols=243 Identities=13% Similarity=0.053 Sum_probs=117.2
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcchh----------HHHHHHH--c--------CCchhhh--c
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINAEL----------FKCLKQT--Y--------GKSYQAF--M 163 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----------~~~l~~~--~--------~~~~~~~--~ 163 (554)
+++|+++|||| +|+||+++++.|++.|. +|++.+... .+++.+. . ....... .
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA---RVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD 83 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTC---EEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence 46889999999 89999999999999876 455554210 0111100 0 0000000 0
Q ss_pred cCcEEEEEccC--CCCC-CC--CC---------HHHHHHHh-------cCccEEEEcCCCCC-----c----hhhHHHHH
Q 042694 164 LSKLVPAVGNV--CENN-LG--LE---------EDLADVIA-------KEVDVIVNSAANTT-----F----DERYDIAI 213 (554)
Q Consensus 164 ~~kv~~v~GDl--~~~~-lG--Ls---------~~~~~~l~-------~~vdiViH~AA~v~-----~----~~~~~~~~ 213 (554)
......+.+|+ +++. +- ++ ++..+.++ ..+|++||+||... + .+.++..+
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T 2ptg_A 84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163 (319)
T ss_dssp -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence 00123444443 2211 00 00 01222222 37999999998531 2 24678899
Q ss_pred HHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhcc
Q 042694 214 DINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESK 292 (554)
Q Consensus 214 ~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k 292 (554)
++|+.|+..+++.+... .+-.++|++||........+ .. ..|..+|
T Consensus 164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------------------------~~-----~~Y~asK 210 (319)
T 2ptg_A 164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG----------------------------YG-----GGMSSAK 210 (319)
T ss_dssp HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-------------------------------------------------
T ss_pred hHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc----------------------------cc-----hhhHHHH
Confidence 99999999999998752 11258999999765332110 00 0111121
Q ss_pred CCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhH
Q 042694 293 EFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADM 372 (554)
Q Consensus 293 ~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~ 372 (554)
... ..+++.++.+.....|+.+..++||.|-.+.....+.-... ......... ..... + .--+...++
T Consensus 211 aal--~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~----~~~~~---p--~~r~~~pee 278 (319)
T 2ptg_A 211 AAL--ESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDK-TFIDLAIDY----SEANA---P--LQKELESDD 278 (319)
T ss_dssp --T--HHHHHHHHHHHHHHHCCEEEEEEECCCC-----------------------------------------CCCHHH
T ss_pred HHH--HHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccch-hhHHHHHHH----HhccC---C--CCCCCCHHH
Confidence 111 14455555444322489999999999855322111000000 000000000 00000 0 012457799
Q ss_pred HHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 373 VVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 373 va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+|++++.++.... .--.+.++.+.++
T Consensus 279 vA~~v~~L~s~~~--~~itG~~i~vdGG 304 (319)
T 2ptg_A 279 VGRAALFLLSPLA--RAVTGATLYVDNG 304 (319)
T ss_dssp HHHHHHHHTSGGG--TTCCSCEEEESTT
T ss_pred HHHHHHHHhCccc--CCccCCEEEECCC
Confidence 9999988775422 1234678888776
No 307
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.72 E-value=3e-08 Score=117.18 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=88.1
Q ss_pred ccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEc-c--hhH----HHHHHHcCCchhhhccCcEEEEEccCCCCCC
Q 042694 108 LKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFIIN-A--ELF----KCLKQTYGKSYQAFMLSKLVPAVGNVCENNL 179 (554)
Q Consensus 108 ~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~~-~--~~~----~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~l 179 (554)
+++++||||||+|. ||.++++.|++.|. +|++.. + ... +.+.+.... ...++.++.+|++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA---~VVl~~~R~~~~l~~~a~eL~~el~~-----~G~~v~~v~~DVsd~-- 719 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGA---KVIVTTSRFSRQVTEYYQGIYARCGA-----RGSQLVVVPFNQGSK-- 719 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESSCCHHHHHHHHHHHHHHCC-----TTCEEEEEECCTTCH--
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCChHHHHHHHHHHHHHhhc-----cCCeEEEEEcCCCCH--
Confidence 57899999999999 99999999999875 456552 2 111 122222211 134788999999987
Q ss_pred CCCHHHHHHHhc-----------CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHHcCC-----C
Q 042694 180 GLEEDLADVIAK-----------EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQCNK-----L 233 (554)
Q Consensus 180 GLs~~~~~~l~~-----------~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~~~-----~ 233 (554)
++.+.+++ .+|+|||+||.... .+.++..+++|+.|+..++++++..+. .
T Consensus 720 ----esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~ 795 (1878)
T 2uv9_A 720 ----QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPA 795 (1878)
T ss_dssp ----HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCE
T ss_pred ----HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCC
Confidence 76666542 58999999997532 256788999999999999887543222 2
Q ss_pred ceEEEEeecee
Q 042694 234 KLFVQVSTAYV 244 (554)
Q Consensus 234 k~~v~vST~~v 244 (554)
.+||++||...
T Consensus 796 G~IVnISS~ag 806 (1878)
T 2uv9_A 796 QVILPLSPNHG 806 (1878)
T ss_dssp EECCEECSCSS
T ss_pred CEEEEEcchhh
Confidence 58999998643
No 308
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1.8e-08 Score=115.58 Aligned_cols=126 Identities=16% Similarity=0.123 Sum_probs=87.1
Q ss_pred ccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+|+||||+|. ||+++++.|++.|. +|++. ++ ...+.+.+....... ....++.++.+|++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA---~VVL~~~R~~e~lee~a~eL~ael~-a~Ga~V~vV~~DVTD~------ 543 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQVTDYYQSIYAKYG-AKGSTLIVVPFNQGSK------ 543 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTC---EEEEEESSCSTTTTTHHHHTTTTTC-CTTCEEEEEECCSSST------
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcC---EEEEEeCCCHHHHHHHHHHHHHHhh-cCCCeEEEEEeCCCCH------
Confidence 46889999999999 99999999999886 45554 22 111222222211000 0134788999999998
Q ss_pred HHHHHHhc-------------CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHHcCCC-----ce
Q 042694 184 DLADVIAK-------------EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQCNKL-----KL 235 (554)
Q Consensus 184 ~~~~~l~~-------------~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~~~~-----k~ 235 (554)
++.+.+++ .+|++||+||.... .+.++..+++|+.|+..++++++..+.+ .+
T Consensus 544 esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGr 623 (1688)
T 2pff_A 544 QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQV 623 (1688)
T ss_dssp THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEE
T ss_pred HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCE
Confidence 66665542 48999999996432 2457888999999999999988432222 47
Q ss_pred EEEEeece
Q 042694 236 FVQVSTAY 243 (554)
Q Consensus 236 ~v~vST~~ 243 (554)
+|++||..
T Consensus 624 IVnISSiA 631 (1688)
T 2pff_A 624 ILPMSPNH 631 (1688)
T ss_dssp CCCCCSCT
T ss_pred EEEEEChH
Confidence 89999864
No 309
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=1e-08 Score=84.54 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=40.5
Q ss_pred cchhHHHHhhcccceeeeec-cccc----cccccCCchhHHHHHHHHHhhhhc-eee-----ccccce
Q 042694 12 APNKFVKAFENNCDLCLLRR-KRSI----MHCQGGGKTTRSSGVSSALKERST-VTD-----TAAGSL 68 (554)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~-~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~-v~~-----~~~~~~ 68 (554)
.+.++++ +|++++. ...+ |||++|||||+|+||+++|+++++ +.+ +++||+
T Consensus 26 ~E~~La~------iW~~vL~~~~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl 87 (110)
T 2cq8_A 26 TAEAVRS------VWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTF 87 (110)
T ss_dssp HHHHHHH------HHHHHCSSCSCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBH
T ss_pred HHHHHHH------HHHHHhCCCCCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCH
Confidence 4455666 9997776 4433 999999999999999999999999 887 255555
No 310
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.53 E-value=5.5e-07 Score=98.03 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=86.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccC-CCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNV-CENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl-~~~~lGLs~~~~ 186 (554)
+++|+++||||++-||+.+++.|.+.|. +|++.+....+.+.++... ...++..+.+|+ .+. +...
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~~~i~~-----~g~~~~~~~~Dv~~~~-----~~~~ 386 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGA---KVVVNDFKDATKTVDEIKA-----AGGEAWPDQHDVAKDS-----EAII 386 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCCHHHHHHHHH-----TTCEEEEECCCHHHHH-----HHHH
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCC---EEEEEeCccHHHHHHHHHh-----cCCeEEEEEcChHHHH-----HHHH
Confidence 5789999999999999999999999886 5566553222222222110 123567788898 443 2223
Q ss_pred HHHh---cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 187 DVIA---KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~---~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
+.+. ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+-.++|++||...
T Consensus 387 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 3333 479999999997532 256889999999999999888754 2 23358999999754
No 311
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.51 E-value=6e-07 Score=90.08 Aligned_cols=121 Identities=14% Similarity=0.062 Sum_probs=80.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||+||+|..++..|+.++. +..|.+++...-.......... ....++..+.+ ..++..
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~~~~~~dL~~~---~~~~~v~~~~~----------t~d~~~ 72 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNAPGVTADISHM---DTGAVVRGFLG----------QQQLEA 72 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSHHHHHHHHHTS---CSSCEEEEEES----------HHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCcHhHHHHhhcc---cccceEEEEeC----------CCCHHH
Confidence 357899999999999999999987653 4567777732111111111000 00112222111 256777
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
.++++|+|||+|+...- ......+...|+.+++++++.+.+. +.+.+++++|.-+
T Consensus 73 al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SNPv 128 (326)
T 1smk_A 73 ALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISNPV 128 (326)
T ss_dssp HHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred HcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCch
Confidence 77899999999997543 2334567899999999999999985 6788999988544
No 312
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.48 E-value=1.5e-07 Score=94.79 Aligned_cols=121 Identities=12% Similarity=0.027 Sum_probs=79.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC----CccEEEEEcch--h-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP----DVGKIFIINAE--L-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~----~V~~i~~~~~~--~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
.++|+||||+||+|++++..|+..+. .+..|.++|.. . .+++.....+ ..+.... +.+|+...
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d-l~~~~~~----~~~~i~~~----- 74 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMME-IDDCAFP----LLAGMTAH----- 74 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH-HHTTTCT----TEEEEEEE-----
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHH-Hhhhccc----ccCcEEEe-----
Confidence 46899999999999999999987542 12367778754 1 2223211100 0000001 11344433
Q ss_pred HHHHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEEee
Q 042694 183 EDLADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQVST 241 (554)
Q Consensus 183 ~~~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~vST 241 (554)
.++...++++|+|||+|+..+- .....++...|+.+++++++.+.+..+.+ .|+++|.
T Consensus 75 -~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 75 -ADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp -SSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -cCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 4445566899999999997653 33456789999999999999999863244 7888874
No 313
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.43 E-value=6.7e-07 Score=89.28 Aligned_cols=121 Identities=15% Similarity=0.004 Sum_probs=78.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCc--hhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKS--YQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~--~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|+||||+||+|++++..|+..+. +..+.++|.+. .++++...... ........+.+..+| +++.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----------d~l~ 69 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----------DENL 69 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----------TTCG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----------cchH
Confidence 4799999999999999999998654 34677777511 12222110000 000011122222222 1122
Q ss_pred HHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 188 VIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
..++++|+|||+|+..+- ......+...|+.+++++++.+++. . +++++++|.-+
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITNPV 125 (313)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSSSH
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecCcH
Confidence 346799999999997643 3345678999999999999999996 5 88999998544
No 314
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.40 E-value=9e-07 Score=74.30 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=67.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+++|+|+|+ |++|+.+++.|++.+ ..+|++++... +++.... ..++..+.+|+.++ +++..
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g--~~~v~~~~r~~-~~~~~~~--------~~~~~~~~~d~~~~------~~~~~ 65 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSS--NYSVTVADHDL-AALAVLN--------RMGVATKQVDAKDE------AGLAK 65 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCS--SEEEEEEESCH-HHHHHHH--------TTTCEEEECCTTCH------HHHHH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCC--CceEEEEeCCH-HHHHHHH--------hCCCcEEEecCCCH------HHHHH
Confidence 3578999999 999999999999876 12566665431 2222211 23566788999876 78888
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEE
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFV 237 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v 237 (554)
+.+++|+|||+++. ..+..+++.|.+ .+.+.|.
T Consensus 66 ~~~~~d~vi~~~~~---------------~~~~~~~~~~~~-~g~~~~~ 98 (118)
T 3ic5_A 66 ALGGFDAVISAAPF---------------FLTPIIAKAAKA-AGAHYFD 98 (118)
T ss_dssp HTTTCSEEEECSCG---------------GGHHHHHHHHHH-TTCEEEC
T ss_pred HHcCCCEEEECCCc---------------hhhHHHHHHHHH-hCCCEEE
Confidence 88999999999853 124678888887 4666554
No 315
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=98.38 E-value=1.2e-05 Score=81.76 Aligned_cols=123 Identities=9% Similarity=-0.040 Sum_probs=80.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEc--chhH------------HHHHHHcCCchhhhccCcEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILR-TVPDVGKIFIIN--AELF------------KCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~-~~~~V~~i~~~~--~~~~------------~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
..+|++|||||++-||..+++.|.+ .|.+ |++++ .... +.+.+... ....++..+.+
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~---Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-----~~G~~a~~i~~ 116 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGAD---TLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-----QKGLYAKSING 116 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-----HTTCCEEEEES
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCE---EEEEeCCchhhhhhcccccchhHHHHHHHHH-----hcCCceEEEEC
Confidence 3578999999999999999999999 8864 44332 1110 01111110 02346788999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCC----------------C-------------------------
Q 042694 173 NVCENNLGLEEDLADVIAK-------EVDVIVNSAANT----------------T------------------------- 204 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v----------------~------------------------- 204 (554)
|++++ ++.+.+.+ .+|++||+||.. .
T Consensus 117 Dvtd~------~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~ 190 (405)
T 3zu3_A 117 DAFSD------EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPA 190 (405)
T ss_dssp CTTSH------HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC
T ss_pred CCCCH------HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCC
Confidence 99987 66665543 699999999863 1
Q ss_pred chhhHHHHHHHhchHHH-HHHHHHHHcCC---CceEEEEeecee
Q 042694 205 FDERYDIAIDINTRGPC-RLMEFAKQCNK---LKLFVQVSTAYV 244 (554)
Q Consensus 205 ~~~~~~~~~~~Nv~gt~-~ll~la~~~~~---~k~~v~vST~~v 244 (554)
-.+.++..+++|..++. .+++.+....- --++|.+||...
T Consensus 191 t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~ 234 (405)
T 3zu3_A 191 TQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGE 234 (405)
T ss_dssp CHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCC
T ss_pred CHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchh
Confidence 12467788888988876 55555443111 137888888644
No 316
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=98.34 E-value=9.3e-06 Score=83.76 Aligned_cols=121 Identities=12% Similarity=-0.016 Sum_probs=78.7
Q ss_pred ccCcEEEEecccccccHH--HHHHHHhhCCCccEEEEEcc--hh------------HHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGATGFLAKV--LIEKILRTVPDVGKIFIINA--EL------------FKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~--Ll~~LL~~~~~V~~i~~~~~--~~------------~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
..+|+++||||++-||.. +++.|.+.|. +|+++.. .. .+.+.+... ....++..+.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~ 129 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEA---HTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-----KKGLVAKNFI 129 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCC---EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-----HTTCCEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCC---EEEEEecCcchhhhcccccccchHHHHHHHHH-----HcCCcEEEEE
Confidence 568999999999999999 9999987775 4444321 10 122222211 1234688999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCC----------------C------------------------
Q 042694 172 GNVCENNLGLEEDLADVIAK-------EVDVIVNSAANT----------------T------------------------ 204 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v----------------~------------------------ 204 (554)
+|++++ +..+.+++ .+|++||+||.. .
T Consensus 130 ~Dvtd~------~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~ 203 (418)
T 4eue_A 130 EDAFSN------ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSS 203 (418)
T ss_dssp SCTTCH------HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECB
T ss_pred eeCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccC
Confidence 999987 66655543 699999999863 0
Q ss_pred -chhhHHHHHHHhchHHH-HHHHHHHHcCCC----ceEEEEeece
Q 042694 205 -FDERYDIAIDINTRGPC-RLMEFAKQCNKL----KLFVQVSTAY 243 (554)
Q Consensus 205 -~~~~~~~~~~~Nv~gt~-~ll~la~~~~~~----k~~v~vST~~ 243 (554)
-.+.++...++|..+.. .+++.+.. +.+ .++|.+||..
T Consensus 204 ~t~e~~~~~~~vn~~~~~~~~~~~l~~-~~~~~~gg~IV~iSSi~ 247 (418)
T 4eue_A 204 ASIEEIEETRKVMGGEDWQEWCEELLY-EDCFSDKATTIAYSYIG 247 (418)
T ss_dssp CCHHHHHHHHHHHSSHHHHHHHHHHHH-TTCEEEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHH-HhhhcCCcEEEEEeCch
Confidence 12356677777777665 55555543 222 3678888764
No 317
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.33 E-value=2.6e-06 Score=84.52 Aligned_cols=119 Identities=11% Similarity=-0.059 Sum_probs=78.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+||||+||+|..++..|+..+. +..+.++|.+ ..+++.....+.... .....+.+..+| . .
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~---~----------~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---Y----------E 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---G----------G
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC---H----------H
Confidence 4799999999999999999988654 4467777751 122222111100000 011233333322 1 1
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
.++++|+|||+|+..+- ......+...|+.+++++++.+.+. +.+.+++++|.-+
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv 122 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPV 122 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSH
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChH
Confidence 25799999999997543 3345577899999999999999985 7889999987544
No 318
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=98.31 E-value=1.3e-07 Score=76.50 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=33.5
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|+++++...+ |||++|||||+|++|+++|++++|+.+
T Consensus 24 i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l 65 (93)
T 4i4d_A 24 IWAETLGRDSVGPHEDFAALGGNSIHAIXITNRVEELVDAEL 65 (93)
T ss_dssp HHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCC
Confidence 78866665544 999999999999999999999999988
No 319
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.29 E-value=7.1e-06 Score=89.25 Aligned_cols=124 Identities=19% Similarity=0.187 Sum_probs=80.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----------hhHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
+++|+++||||++-||+.+++.|++.|. +|++.+. ...+.+.++... ...+.. .|+++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-----~g~~~~---~d~~d 74 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGA---KVVVNDLGGALNGQGGNSKAADVVVDEIVK-----NGGVAV---ADYNN 74 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECC-----------CHHHHHHHHHHH-----TTCEEE---EECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCccccccccchHHHHHHHHHHHh-----cCCeEE---EEcCC
Confidence 5689999999999999999999999886 4555432 112222222110 111222 46655
Q ss_pred CCCCCCHHHHHHHh---cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeece
Q 042694 177 NNLGLEEDLADVIA---KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAY 243 (554)
Q Consensus 177 ~~lGLs~~~~~~l~---~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~ 243 (554)
..- -++..+.+. ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. | .+-.++|++||..
T Consensus 75 ~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~a 152 (604)
T 2et6_A 75 VLD--GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA 152 (604)
T ss_dssp TTC--HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHH--HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence 410 012233332 379999999997532 356889999999999999888753 2 1335899999975
Q ss_pred e
Q 042694 244 V 244 (554)
Q Consensus 244 v 244 (554)
.
T Consensus 153 g 153 (604)
T 2et6_A 153 G 153 (604)
T ss_dssp H
T ss_pred H
Confidence 4
No 320
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=98.27 E-value=1.7e-07 Score=75.36 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=38.0
Q ss_pred CCcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee
Q 042694 10 SVAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+..+.++.+ +|++++....+ |||++|||||.|++|.++|++++|+.+
T Consensus 13 ~~~e~~l~~------i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l 63 (91)
T 1dny_A 13 NAVESKLAE------IWERVLGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVEL 63 (91)
T ss_dssp SHHHHHHHH------HHHHHHTCSSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHH------HHHHHhCCCCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCC
Confidence 334455666 88866664433 999999999999999999999999987
No 321
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=98.25 E-value=1.7e-05 Score=81.37 Aligned_cols=121 Identities=12% Similarity=-0.022 Sum_probs=78.5
Q ss_pred cCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEc--chhH------------HHHHHHcCCchhhhccCcEEEEEcc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILR-TVPDVGKIFIIN--AELF------------KCLKQTYGKSYQAFMLSKLVPAVGN 173 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~-~~~~V~~i~~~~--~~~~------------~~l~~~~~~~~~~~~~~kv~~v~GD 173 (554)
.+|++|||||++=||..+++.|.+ .|.+ |++++ .... ..+.+... ....++..+.+|
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~---Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-----~~G~~a~~i~~D 131 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD---TLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-----AAGLYSKSINGD 131 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-----HTTCCEEEEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE---EEEEeCCchhhhhhhcccccchhHHHHHHHH-----hcCCcEEEEEec
Confidence 478999999999999999999999 8864 44432 1110 00111110 022467889999
Q ss_pred CCCCCCCCCHHHHHHHh--------cCccEEEEcCCCC----------------C-------------------------
Q 042694 174 VCENNLGLEEDLADVIA--------KEVDVIVNSAANT----------------T------------------------- 204 (554)
Q Consensus 174 l~~~~lGLs~~~~~~l~--------~~vdiViH~AA~v----------------~------------------------- 204 (554)
++++ +..+.+. ..+|++||+||.. .
T Consensus 132 vtd~------~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~ 205 (422)
T 3s8m_A 132 AFSD------AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPA 205 (422)
T ss_dssp TTSH------HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC
T ss_pred CCCH------HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCC
Confidence 9987 6655543 4689999999861 1
Q ss_pred chhhHHHHHHHhchHHH-HHHHHHHHcCCC----ceEEEEeecee
Q 042694 205 FDERYDIAIDINTRGPC-RLMEFAKQCNKL----KLFVQVSTAYV 244 (554)
Q Consensus 205 ~~~~~~~~~~~Nv~gt~-~ll~la~~~~~~----k~~v~vST~~v 244 (554)
-.+.++...++|..++. .+++.+.. +.. -++|.+||...
T Consensus 206 t~e~~~~~v~Vn~~~~~~~~~~a~~~-~~m~~~gG~IVniSSi~g 249 (422)
T 3s8m_A 206 SAQEIEDTITVMGGQDWELWIDALEG-AGVLADGARSVAFSYIGT 249 (422)
T ss_dssp CHHHHHHHHHHHSSHHHHHHHHHHHH-TTCEEEEEEEEEEEECCC
T ss_pred CHHHHHHHHHhhchhHHHHHHHHHHH-HHHhhCCCEEEEEeCchh
Confidence 12356677777877765 56665543 122 37899988643
No 322
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.05 E-value=1.1e-05 Score=100.69 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=85.3
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hH---HHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LF---KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~---~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
+-.+++++||||+|-||..+++.|.+.|.+ +|++..+. .. ....+... ....++.++.+|++++
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~-----~~g~~v~~~~~Dvsd~---- 1949 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQ--KLVLTSRSGIRTGYQARQVREWR-----RQGVQVLVSTSNASSL---- 1949 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCSHHHHHHHHHHH-----HTTCEEEEECCCSSSH----
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCCC--EEEEEeCCCcchHHHHHHHHHHH-----hCCCEEEEEecCCCCH----
Confidence 346899999999999999999999998753 46655321 11 11111110 0234788999999987
Q ss_pred CHHHHHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 182 EEDLADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 182 s~~~~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
++.+.+.+ .+|+|||+|+.... .+.++..+++|+.|+.++.+++.. ++...+||.+||...
T Consensus 1950 --~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag 2024 (2512)
T 2vz8_A 1950 --DGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSC 2024 (2512)
T ss_dssp --HHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHH
T ss_pred --HHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhh
Confidence 66555543 69999999997532 245678889999999999888764 345679999999755
No 323
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.95 E-value=2.7e-05 Score=81.47 Aligned_cols=107 Identities=15% Similarity=0.193 Sum_probs=71.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+||| +|++|+++++.|++.+. +|++.++. .++..+... ...++..+.+|+.+. +++..+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~---~V~v~~R~-~~~a~~la~------~~~~~~~~~~Dv~d~------~~l~~~ 65 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGI---KVTVACRT-LESAKKLSA------GVQHSTPISLDVNDD------AALDAE 65 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTC---EEEEEESS-HHHHHHTTT------TCTTEEEEECCTTCH------HHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcC---EEEEEECC-HHHHHHHHH------hcCCceEEEeecCCH------HHHHHH
Confidence 67899998 79999999999998663 46655543 233332211 112467888999876 778788
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHH--Hhc-------hHHHHHHHHHHHcCCCc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAID--INT-------RGPCRLMEFAKQCNKLK 234 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~--~Nv-------~gt~~ll~la~~~~~~k 234 (554)
++++|+|||+++......-...+.+ .|+ .++.++++.|++. +++
T Consensus 66 l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 66 VAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp HTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred HcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 8899999999986433221223333 343 3688999999984 654
No 324
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=97.89 E-value=8.7e-06 Score=80.16 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=57.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|.+|+.+++.|++.|. +|++.++.. .+.+.+.... ..++.++.+|++++ ++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~---~V~i~~R~~~~~~~l~~~~~~------~~~~~~~~~D~~~~------~~ 181 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLDKAQAAADSVNK------RFKVNVTAAETADD------AS 181 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHHHH------HHTCCCEEEECCSH------HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCHHHHHHHHHHHHh------cCCcEEEEecCCCH------HH
Confidence 4689999999999999999999999774 466655421 2222221110 01345678899877 78
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
...+.+++|+|||+|+.
T Consensus 182 ~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 182 RAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHHHTTTCSEEEECCCT
T ss_pred HHHHHHhCCEEEECCCc
Confidence 88888899999999975
No 325
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.58 E-value=0.00011 Score=73.53 Aligned_cols=118 Identities=17% Similarity=0.103 Sum_probs=71.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccE-----EEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGK-----IFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~-----i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|.||||+|++|++++..|+..+. +.. ++++|... .+.++....+. .+....-+..+.+ . .
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~DL-~~~~~~~~~~~~~----~-----~ 71 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLMEL-QDCALPLLKDVIA----T-----D 71 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHH-HHTCCTTEEEEEE----E-----S
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHhhh-HhhhhcccCCEEE----c-----C
Confidence 46899999999999999999986432 223 77777532 12222211100 0000011111111 1 0
Q ss_pred HHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCc--eEEEEe
Q 042694 184 DLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLK--LFVQVS 240 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k--~~v~vS 240 (554)
++++ .++++|+|||+||..+ ..+...++.+.|+..++++++.+.+. ..+ .++.+|
T Consensus 72 ~~~~-~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 72 KEEI-AFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp CHHH-HTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred CcHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 2233 3579999999998653 23455678899999999999999985 444 355444
No 326
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.55 E-value=0.0003 Score=69.88 Aligned_cols=114 Identities=14% Similarity=0.059 Sum_probs=72.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|.|+||+|++|..++..|+..+. +..|.++|.............. ....++....| ..+++..+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~~~~~a~dL~~~---~~~~~l~~~~~----------t~d~~~a~ 66 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAHTPGVAADLSHI---ETRATVKGYLG----------PEQLPDCL 66 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSSHHHHHHHHTTS---SSSCEEEEEES----------GGGHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCccHHHHHHHhcc---CcCceEEEecC----------CCCHHHHh
Confidence 4799999999999999999887543 4578888754311111111110 00112222211 14566667
Q ss_pred cCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEE
Q 042694 191 KEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQV 239 (554)
Q Consensus 191 ~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~v 239 (554)
+++|+||++|+...- .+.-.++...|+..++++++.+.+. ... .++.+
T Consensus 67 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 116 (314)
T 1mld_A 67 KGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (314)
T ss_dssp TTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred CCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 899999999987542 2333466899999999999988875 344 44443
No 327
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.54 E-value=0.0005 Score=59.03 Aligned_cols=73 Identities=11% Similarity=0.196 Sum_probs=48.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+|+ |++|+.+++.|.+.+. .|.+++.. ..+.+++.. .+..+.||..++ +.+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~---~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~------~~l~ 63 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDIDKDICKKASAEI----------DALVINGDCTKI------KTLE 63 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHC----------SSEEEESCTTSH------HHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCH------HHHH
Confidence 468999997 9999999999998775 45555432 222232211 345678888765 5554
Q ss_pred HH-hcCccEEEEcCCC
Q 042694 188 VI-AKEVDVIVNSAAN 202 (554)
Q Consensus 188 ~l-~~~vdiViH~AA~ 202 (554)
.. .+++|+||++...
T Consensus 64 ~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 64 DAGIEDADMYIAVTGK 79 (140)
T ss_dssp HTTTTTCSEEEECCSC
T ss_pred HcCcccCCEEEEeeCC
Confidence 33 5689999999753
No 328
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=97.54 E-value=1.9e-05 Score=79.17 Aligned_cols=54 Identities=9% Similarity=-0.004 Sum_probs=41.9
Q ss_pred CCcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 10 SVAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+..+.++.+ +|++++..+.+ |||++|||||+|++|+++|++++|+.+ ++.||+.
T Consensus 10 ~~~e~~l~~------~~~~~l~~~~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~ 72 (329)
T 3tej_A 10 AGSETIIAA------AFSSLLGCDVQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVA 72 (329)
T ss_dssp TTHHHHHHH------HHHHHHTC-CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHH
T ss_pred CHHHHHHHH------HHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHH
Confidence 344556666 89966664434 999999999999999999999999987 2666653
No 329
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.51 E-value=0.00023 Score=61.45 Aligned_cols=101 Identities=11% Similarity=0.139 Sum_probs=62.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+|+|+ |.+|+.+++.|.+.+.+| ++++... +++.... ......+.||..++ +.+..
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v---~~~d~~~-~~~~~~~--------~~~~~~~~~d~~~~------~~l~~ 65 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINE-EKVNAYA--------SYATHAVIANATEE------NELLS 65 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCH-HHHHTTT--------TTCSEEEECCTTCH------HHHHT
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEE---EEEeCCH-HHHHHHH--------HhCCEEEEeCCCCH------HHHHh
Confidence 4678999998 999999999999887654 4444321 2221111 11235678898765 66665
Q ss_pred H-hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 189 I-AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 189 l-~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
+ .+++|+||++++.. . ..| ..+.+.|++. +.++++..++.
T Consensus 66 ~~~~~~d~vi~~~~~~-----~----~~~----~~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 66 LGIRNFEYVIVAIGAN-----I----QAS----TLTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp TTGGGCSEEEECCCSC-----H----HHH----HHHHHHHHHT-TCSEEEEECCS
T ss_pred cCCCCCCEEEECCCCc-----h----HHH----HHHHHHHHHc-CCCeEEEEeCC
Confidence 4 56899999998751 0 122 2356667764 55666555543
No 330
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=97.37 E-value=2.6e-05 Score=85.36 Aligned_cols=46 Identities=11% Similarity=-0.096 Sum_probs=0.0
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhh-hhceee-----ccccceee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKE-RSTVTD-----TAAGSLVL 70 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~-~~~v~~-----~~~~~~~~ 70 (554)
+|++++..+.+ |||++|||||+|+||+++|++ .+|+.+ ++.||+..
T Consensus 532 iw~~vL~~~~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~ 587 (620)
T 4dg8_A 532 LWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQ 587 (620)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHhCCCCCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHH
Confidence 89977775544 999999999999999999998 788876 37777653
No 331
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.33 E-value=0.00068 Score=85.03 Aligned_cols=108 Identities=14% Similarity=0.152 Sum_probs=77.5
Q ss_pred ccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEcc--hh-----HHHHHHHcCCchhhhccCcEEEEEccCCCCCC
Q 042694 108 LKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFIINA--EL-----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNL 179 (554)
Q Consensus 108 ~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~~~--~~-----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~l 179 (554)
++||+++||||++- ||+.+++.|++.|. +|++.+. .. .+.+.+.... ...++..+.+|++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA---~Vvi~~r~~~~~~~~~~~~l~~~l~~-----~G~~~~~v~~Dvtd~-- 2203 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA---TVIATTSRLDDDRLAFYKQLYRDHAR-----FDATLWVVPANMASY-- 2203 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESCCSHHHHHHHHHHHHHHCC-----TTCEEEEEECCTTCH--
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCC---EEEEEeCChhhhhhHHHHHHHHHHhh-----cCCeEEEEEecCCCH--
Confidence 68999999999998 99999999999886 4454432 21 2333333322 234788999999988
Q ss_pred CCCHHHHHHHh----c-------CccEEEEcCCC----CC------------chhhHHHHHHHhchHHHHHHHHHHH
Q 042694 180 GLEEDLADVIA----K-------EVDVIVNSAAN----TT------------FDERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 180 GLs~~~~~~l~----~-------~vdiViH~AA~----v~------------~~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
++.+.+. + .+|++||+|+. .. ++...+...++|+.++..+++.+..
T Consensus 2204 ----~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D 2204 ----SDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp ----HHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766663 2 48999999997 11 2224556689999999988887754
No 332
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.32 E-value=4.7e-05 Score=81.36 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=43.0
Q ss_pred CCcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 10 SVAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+..+.++++ +|++++....+ |||++|||||+|++|++++++++|+.+ ++.||+.
T Consensus 9 ~~~e~~l~~------iw~~vL~~~~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~ 71 (520)
T 2jgp_A 9 SVWEARLAQ------VWEQVLNVPQVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQ 71 (520)
T ss_dssp SHHHHHHHH------HHHHHHTCSCCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHH
T ss_pred CHHHHHHHH------HHHHHhCCCCCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHH
Confidence 444566666 89977665544 999999999999999999999999887 3667664
No 333
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.30 E-value=0.0003 Score=72.60 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=56.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc-cEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDV-GKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V-~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++|+|+|| |++|+.+++.|++.+ ++ ..|++.++. ..+.+.+..+. ....++..+.+|++++ +++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~~~~~la~~l~~----~~~~~~~~~~~D~~d~------~~l 68 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLSKCQEIAQSIKA----KGYGEIDITTVDADSI------EEL 68 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHHHHHHHHHHHHH----TTCCCCEEEECCTTCH------HHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHHHHHHHHHHhhh----hcCCceEEEEecCCCH------HHH
Confidence 368999999 999999999999864 33 456665542 22222222210 0113678899999987 888
Q ss_pred HHHhcC--ccEEEEcCCC
Q 042694 187 DVIAKE--VDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~~--vdiViH~AA~ 202 (554)
+.++++ +|+|||+|+.
T Consensus 69 ~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 69 VALINEVKPQIVLNIALP 86 (405)
T ss_dssp HHHHHHHCCSEEEECSCG
T ss_pred HHHHHhhCCCEEEECCCc
Confidence 888876 9999999874
No 334
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.00079 Score=70.55 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=67.3
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+....++++|+|+|| |++|+.+++.|++.+ .. +|++.++. .++.++.... .++..+.+|+.+.
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g~-~V~v~~R~-~~ka~~la~~-------~~~~~~~~D~~d~------ 79 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-DI-NVTVACRT-LANAQALAKP-------SGSKAISLDVTDD------ 79 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTST-TE-EEEEEESS-HHHHHHHHGG-------GTCEEEECCTTCH------
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCC-CC-eEEEEECC-HHHHHHHHHh-------cCCcEEEEecCCH------
Confidence 334467889999998 999999999999862 33 56666543 2222221110 1355678898776
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHH-------hc--hHHHHHHHHHHHcCCC
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDI-------NT--RGPCRLMEFAKQCNKL 233 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~-------Nv--~gt~~ll~la~~~~~~ 233 (554)
+++..+++++|+|||+++......-...+.+. +. ..+.++++.|++. ++
T Consensus 80 ~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv 137 (467)
T 2axq_A 80 SALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI 137 (467)
T ss_dssp HHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred HHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence 67777778999999998863221111222221 11 2457788888774 44
No 335
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=97.26 E-value=9.1e-05 Score=58.51 Aligned_cols=29 Identities=3% Similarity=-0.209 Sum_probs=27.2
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+||++|||||.+++|...|++++|+.+
T Consensus 37 ~~~~~~lG~DSl~~~~l~~~l~~~~~~~i 65 (88)
T 2afd_A 37 EESFDNYDLNSSKALILLGRLEKWLGKEL 65 (88)
T ss_dssp TSCGGGTTCCSTHHHHHHHHHHHHTTSCC
T ss_pred CCCHHHcCccHHHHHHHHHHHHHHHCCCc
Confidence 33999999999999999999999999998
No 336
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.24 E-value=0.0012 Score=57.00 Aligned_cols=72 Identities=10% Similarity=0.212 Sum_probs=51.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|+|+|+ |++|+.+++.|.+.+.+| ++++. ...+.+++ ..+.++.||.+++ +.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V---~~id~~~~~~~~~~~-----------~~~~~~~gd~~~~------~~l 63 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKV---LAVDKSKEKIELLED-----------EGFDAVIADPTDE------SFY 63 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCE---EEEESCHHHHHHHHH-----------TTCEEEECCTTCH------HHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeE---EEEECCHHHHHHHHH-----------CCCcEEECCCCCH------HHH
Confidence 4578999998 999999999999988754 44443 22222222 2456789999987 666
Q ss_pred HHH-hcCccEEEEcCC
Q 042694 187 DVI-AKEVDVIVNSAA 201 (554)
Q Consensus 187 ~~l-~~~vdiViH~AA 201 (554)
..+ .+++|+||.+.+
T Consensus 64 ~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 64 RSLDLEGVSAVLITGS 79 (141)
T ss_dssp HHSCCTTCSEEEECCS
T ss_pred HhCCcccCCEEEEecC
Confidence 655 358999998876
No 337
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=97.15 E-value=0.00013 Score=58.73 Aligned_cols=28 Identities=7% Similarity=-0.051 Sum_probs=26.8
Q ss_pred ccccccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+||++|||||.+++|.+.|++++|+.+
T Consensus 45 ~~f~~lG~DSL~a~~l~~~l~~~~g~~l 72 (95)
T 2ju1_A 45 TPFKELGFDSLAAVRLRNLLNAATGLRL 72 (95)
T ss_dssp SCHHHHTCSSHHHHHHHHHHGGGTSSCC
T ss_pred CCHHHcCCcHHHHHHHHHHHHHHHCCCC
Confidence 3999999999999999999999999988
No 338
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=97.10 E-value=0.00055 Score=64.29 Aligned_cols=78 Identities=23% Similarity=0.284 Sum_probs=48.9
Q ss_pred cCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEc
Q 042694 109 KAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 109 ~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+||+|||||| ||.+|..+++.+++.|.+| .++..+.- + .+. ....+..+..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V---~lv~~~~~--~---~~~-----~~~~~~~~~v 68 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEV---CLITTKRA--L---KPE-----PHPNLSIREI 68 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEE---EEEECTTS--C---CCC-----CCTTEEEEEC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEE---EEEeCCcc--c---ccc-----CCCCeEEEEH
Confidence 5899999999 9999999999999998754 33332210 0 000 0124444433
Q ss_pred cCCCCCCCCCHHHHHH---HhcCccEEEEcCCCCCch
Q 042694 173 NVCENNLGLEEDLADV---IAKEVDVIVNSAANTTFD 206 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~---l~~~vdiViH~AA~v~~~ 206 (554)
+ .. ++.++. ...++|++||+||...|.
T Consensus 69 ~--s~-----~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 69 T--NT-----KDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp C--SH-----HHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred h--HH-----HHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 3 21 122333 335899999999987663
No 339
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.02 E-value=0.00091 Score=67.97 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=63.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.|+|+|.|| |++|+.+++.|.+ .++| .+...+.. ++.+. .+.+..+..|+.++ +.+..+
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v-~~~~~~~~---~~~~~---------~~~~~~~~~d~~d~------~~l~~~ 74 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFDV-YIGDVNNE---NLEKV---------KEFATPLKVDASNF------DKLVEV 74 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSEE-EEEESCHH---HHHHH---------TTTSEEEECCTTCH------HHHHHH
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCCe-EEEEcCHH---HHHHH---------hccCCcEEEecCCH------HHHHHH
Confidence 467999998 9999999998876 4544 33333322 22221 23456688898877 888999
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
++++|+||+++... + ...++++|.+. + .+|+..++.
T Consensus 75 ~~~~DvVi~~~p~~-~--------------~~~v~~~~~~~-g---~~yvD~s~~ 110 (365)
T 3abi_A 75 MKEFELVIGALPGF-L--------------GFKSIKAAIKS-K---VDMVDVSFM 110 (365)
T ss_dssp HTTCSEEEECCCGG-G--------------HHHHHHHHHHH-T---CEEEECCCC
T ss_pred HhCCCEEEEecCCc-c--------------cchHHHHHHhc-C---cceEeeecc
Confidence 99999999998641 1 12578888875 3 255555443
No 340
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.91 E-value=0.0029 Score=55.49 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=53.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|+|+|+ |.+|+.+++.|.+.+.+| .+++.. ..+.+.+.. ...+.++.||.+++ +.+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V---~vid~~~~~~~~~~~~~~--------~~~~~~i~gd~~~~------~~l 64 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNV---TVISNLPEDDIKQLEQRL--------GDNADVIPGDSNDS------SVL 64 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCCHHHHHHHHHHH--------CTTCEEEESCTTSH------HHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCChHHHHHHHHhh--------cCCCeEEEcCCCCH------HHH
Confidence 457999996 999999999999887654 444432 122333322 23577899999887 777
Q ss_pred HHH-hcCccEEEEcCCC
Q 042694 187 DVI-AKEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l-~~~vdiViH~AA~ 202 (554)
... .+++|+|+-+...
T Consensus 65 ~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 65 KKAGIDRCRAILALSDN 81 (153)
T ss_dssp HHHTTTTCSEEEECSSC
T ss_pred HHcChhhCCEEEEecCC
Confidence 765 6799999988654
No 341
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=96.75 E-value=0.00054 Score=54.15 Aligned_cols=29 Identities=14% Similarity=0.027 Sum_probs=27.2
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+||++|+|||.+++|...|++++|+.+
T Consensus 34 ~~~~~~lG~DSL~~~~l~~~l~~~~g~~l 62 (89)
T 2kr5_A 34 DSNFADMGIDSLSSMVIGSRFREDLGLDL 62 (89)
T ss_dssp TCBHHHHTCCHHHHHHHHHHHHHTTCCCC
T ss_pred CCCHHHcCccHHHHHHHHHHHHHHHCCCC
Confidence 33999999999999999999999999998
No 342
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=96.70 E-value=0.00059 Score=74.49 Aligned_cols=44 Identities=7% Similarity=-0.071 Sum_probs=32.6
Q ss_pred ceeeeec-cc----cccccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRR-KR----SIMHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~-~~----~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
.|..++. .. +.|||++|||||+|++|+++|++ .++.+ ++.||+.
T Consensus 553 ~~~~~l~~~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~ 606 (617)
T 3rg2_A 553 VILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTID 606 (617)
T ss_dssp HHGGGSCTTCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHH
T ss_pred HHHHHhccCCCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHH
Confidence 6775553 22 34999999999999999999997 56665 3666653
No 343
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=96.69 E-value=0.00033 Score=83.33 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=37.7
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|++++....+ |||++|||||+|++|.++|++++|+.+ ++.||+.
T Consensus 980 ~~~~vL~~~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~ 1033 (1304)
T 2vsq_A 980 IWSEVLGRKQIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIA 1033 (1304)
T ss_dssp HHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHH
T ss_pred HHHHHcCCCccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHH
Confidence 89977765544 999999999999999999999999887 2666653
No 344
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.56 E-value=0.0049 Score=61.66 Aligned_cols=114 Identities=11% Similarity=0.048 Sum_probs=69.6
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+|.++++|.|+||+|++|+.++..|+..+. ...|+++|... ++++....+.... ....++.. . .
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~-~k~~g~a~DL~~~~~~~~~i~~-t------------~ 68 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFA-VGLEGVAEEIRHCGFEGLNLTF-T------------S 68 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCH-HHHHHHHHHHHHHCCTTCCCEE-E------------S
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCc-hhHHHHHHhhhhCcCCCCceEE-c------------C
Confidence 456788999999999999999999988763 23677776421 2222111000000 00012211 1 2
Q ss_pred HHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCce
Q 042694 185 LADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKL 235 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~ 235 (554)
++...++++|+||++|+..+ ..+.-.++...|+.-.+.+++.+.+. ..+.
T Consensus 69 d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a 119 (343)
T 3fi9_A 69 DIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDC 119 (343)
T ss_dssp CHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred CHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence 34444689999999998743 23345678899999999999999875 3444
No 345
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=96.54 E-value=0.0026 Score=59.54 Aligned_cols=76 Identities=13% Similarity=0.233 Sum_probs=49.1
Q ss_pred ccCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
++||+|||||| ||.+|..+++.|.+.|.+| +++..+. . .. ....+. .
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V---~l~~~~~--~----l~------~~~g~~--~ 68 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV---TLVSGPV--S----LP------TPPFVK--R 68 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE---EEEECSC--C----CC------CCTTEE--E
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEE---EEEECCc--c----cc------cCCCCe--E
Confidence 57899999999 7999999999999998754 3333221 0 00 011222 3
Q ss_pred ccCCCCCCCCCHHHHHHH---hcCccEEEEcCCCCCc
Q 042694 172 GNVCENNLGLEEDLADVI---AKEVDVIVNSAANTTF 205 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l---~~~vdiViH~AA~v~~ 205 (554)
.|+... ++.++.+ ..++|++||+||...|
T Consensus 69 ~dv~~~-----~~~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 69 VDVMTA-----LEMEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp EECCSH-----HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred EccCcH-----HHHHHHHHHhcCCCCEEEECCcccCC
Confidence 466553 2333333 3479999999997655
No 346
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=96.30 E-value=0.0015 Score=52.65 Aligned_cols=28 Identities=4% Similarity=-0.041 Sum_probs=26.8
Q ss_pred ccccccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+||++|+|||.+++|.+.|++++|+.+
T Consensus 45 ~~~~~lG~DSl~~~~l~~~l~~~~g~~l 72 (99)
T 2liu_A 45 QKFVDLGLDSIVGVEWTTTINQTYNLNL 72 (99)
T ss_dssp SCHHHHTCCHHHHHHHHHHHHHHHTCCC
T ss_pred CCHHHhCccHHHHHHHHHHHHHHHCCCc
Confidence 3999999999999999999999999988
No 347
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=96.19 E-value=0.0026 Score=48.70 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=27.0
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|| ++|+|||.+++|...|+++||+.+
T Consensus 26 ~~~l~~dlG~DSl~~~el~~~le~~fgi~i 55 (78)
T 1l0i_A 26 NASFVEDLGADSLDTVELVMALEEEFDTEI 55 (78)
T ss_dssp TCBTTTTSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred CcchhhhcCCCHHHHHHHHHHHHHHhCCCC
Confidence 33897 999999999999999999999998
No 348
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=96.16 E-value=0.013 Score=59.07 Aligned_cols=81 Identities=15% Similarity=0.063 Sum_probs=54.9
Q ss_pred ccCcEEEEecccccccHHHHHHHH-hhCCCccEEEEEcch---------------hHHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKIL-RTVPDVGKIFIINAE---------------LFKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL-~~~~~V~~i~~~~~~---------------~~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
..+|+||||||+.=+|......|. +.+-.+ -++..+.+ .+.+..+. ...+...+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~v-i~v~~~~~~~~~~~atag~~~~~a~~~~i~~--------~G~~a~~i~ 118 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAAT-IGVSFEKAGSETKYGTPGWYNNLAFDEAAKR--------EGLYSVTID 118 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEE-EEEECCCCCCSSSCCCHHHHHHHHHHHHHHH--------HTCCEEEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCE-EEEecCCcccccccccccchhHHHHHHHHHH--------cCCCceeEe
Confidence 357999999999999999888887 556433 11222211 11122221 234678899
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCC
Q 042694 172 GNVCENNLGLEEDLADVIAK-------EVDVIVNSAANT 203 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v 203 (554)
+|++++ +..+.+++ ++|+++|++|..
T Consensus 119 ~Dv~d~------e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 119 GDAFSD------EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp SCTTSH------HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CCCCCH------HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 999987 77766653 799999999974
No 349
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=96.11 E-value=0.0021 Score=49.80 Aligned_cols=29 Identities=10% Similarity=0.087 Sum_probs=27.2
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+++|+|||.+++|...|+++||+.+
T Consensus 28 ~~~l~dlG~DSl~~vel~~~le~~fgi~i 56 (82)
T 2ava_A 28 DSEFSKLGADSLDTVEIVMNLEEEFGINV 56 (82)
T ss_dssp SCCSCCCTTCCSCHHHHHHHHHHHTTCCC
T ss_pred CCchhhcCCCHHHHHHHHHHHHHHHCCcc
Confidence 33899999999999999999999999998
No 350
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.07 E-value=0.012 Score=54.80 Aligned_cols=73 Identities=18% Similarity=0.163 Sum_probs=50.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH-
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI- 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l- 189 (554)
|+|+|+|+ |.+|+.+++.|.+.+.+| .++..+....+.+.+.. .+.++.||.+++ +.+...
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v-~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~------~~l~~a~ 62 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGV-VIINKDRELCEEFAKKL----------KATIIHGDGSHK------EILRDAE 62 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCE-EEEESCHHHHHHHHHHS----------SSEEEESCTTSH------HHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeE-EEEECCHHHHHHHHHHc----------CCeEEEcCCCCH------HHHHhcC
Confidence 47999996 999999999999987755 33332323233333221 356799999987 666665
Q ss_pred hcCccEEEEcCC
Q 042694 190 AKEVDVIVNSAA 201 (554)
Q Consensus 190 ~~~vdiViH~AA 201 (554)
.+++|+||-+..
T Consensus 63 i~~ad~vi~~~~ 74 (218)
T 3l4b_C 63 VSKNDVVVILTP 74 (218)
T ss_dssp CCTTCEEEECCS
T ss_pred cccCCEEEEecC
Confidence 578999997654
No 351
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.06 E-value=0.027 Score=50.66 Aligned_cols=73 Identities=11% Similarity=0.117 Sum_probs=50.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+++|+|.| .|.+|..+++.|.+. +.+| ++++. ...+.+++ ..+.++.||.+++ +.
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V---~vid~~~~~~~~~~~-----------~g~~~~~gd~~~~------~~ 96 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKIS---LGIEIREEAAQQHRS-----------EGRNVISGDATDP------DF 96 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCE---EEEESCHHHHHHHHH-----------TTCCEEECCTTCH------HH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeE---EEEECCHHHHHHHHH-----------CCCCEEEcCCCCH------HH
Confidence 356899998 599999999999988 8754 44443 22222221 1345688998766 66
Q ss_pred HHHH--hcCccEEEEcCCC
Q 042694 186 ADVI--AKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l--~~~vdiViH~AA~ 202 (554)
+..+ .+++|+||.+...
T Consensus 97 l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 97 WERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp HHTBCSCCCCCEEEECCSS
T ss_pred HHhccCCCCCCEEEEeCCC
Confidence 6665 6789999987653
No 352
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=96.03 E-value=0.0034 Score=47.77 Aligned_cols=29 Identities=10% Similarity=-0.002 Sum_probs=27.1
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| +++|+|||.+++|...++++||+.+
T Consensus 24 ~~~l~~~lG~DSl~~~~l~~~le~~~gi~i 53 (77)
T 2ehs_A 24 EAKFVEDLGADSLDVVELIMAFEEEFGIEI 53 (77)
T ss_dssp TCBTTTTTCCCHHHHHHHHHHHHHHHTCCC
T ss_pred ccchhhccCCCHHHHHHHHHHHHHHhCCcc
Confidence 3489 9999999999999999999999998
No 353
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.03 E-value=0.016 Score=50.72 Aligned_cols=78 Identities=12% Similarity=0.164 Sum_probs=50.2
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
...+++|+|.|+ |.+|..+++.|.+.+. +|++++... +++.. .. ....+..+.+|..++ +.+
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~---~V~vid~~~-~~~~~-~~------~~~g~~~~~~d~~~~------~~l 77 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGH---SVVVVDKNE-YAFHR-LN------SEFSGFTVVGDAAEF------ETL 77 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCG-GGGGG-SC------TTCCSEEEESCTTSH------HHH
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCH-HHHHH-HH------hcCCCcEEEecCCCH------HHH
Confidence 345789999996 9999999999998775 455554321 11111 00 012345677887654 555
Q ss_pred HHH-hcCccEEEEcCCC
Q 042694 187 DVI-AKEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l-~~~vdiViH~AA~ 202 (554)
... .+++|+||.+.+.
T Consensus 78 ~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 78 KECGMEKADMVFAFTND 94 (155)
T ss_dssp HTTTGGGCSEEEECSSC
T ss_pred HHcCcccCCEEEEEeCC
Confidence 543 4689999998764
No 354
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.98 E-value=0.028 Score=55.37 Aligned_cols=116 Identities=15% Similarity=0.090 Sum_probs=72.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
++|.|+||+|.+|..++..|..+.+-+..++++|... .+........ .....++..+.++ ++++ -
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~---~~~~~~v~~~~~~----------~~~~-~ 66 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH---IPTAVKIKGFSGE----------DATP-A 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHT---SCSSEEEEEECSS----------CCHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhC---CCCCceEEEecCC----------CcHH-H
Confidence 4799999999999999988877523345888887542 1111111100 0011122222221 2233 3
Q ss_pred hcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 190 AKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 190 ~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+||-+|+..+ ..+.-.++.+.|+.-.+.+.+...+. ..+.++.+-|
T Consensus 67 ~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvt 118 (312)
T 3hhp_A 67 LEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT 118 (312)
T ss_dssp HTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 479999999998754 34457788999999999999988875 3444444444
No 355
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=95.93 E-value=0.0046 Score=47.74 Aligned_cols=28 Identities=18% Similarity=-0.051 Sum_probs=26.5
Q ss_pred cccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+|| ++|+|||.+++|...|+++||+.+
T Consensus 31 ~~l~~dlG~DSl~~~~l~~~le~~fgi~i 59 (82)
T 2cnr_A 31 KSFTDDLDVDSLSMVEVVVAAEERFDVKI 59 (82)
T ss_dssp SBTTTTSCCCHHHHHHHHHHHHGGGTBCC
T ss_pred cchhhccCCChHHHHHHHHHHHHHhCCCC
Confidence 3897 999999999999999999999998
No 356
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=95.82 E-value=0.0032 Score=58.59 Aligned_cols=28 Identities=4% Similarity=-0.046 Sum_probs=26.8
Q ss_pred ccccccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+||++|||||.+++|...|++++|+.+
T Consensus 154 ~~f~~lG~DSl~a~el~~~l~~~~g~~l 181 (212)
T 2l22_A 154 AQFLDLGMDSVTGTQWMRGVSRHFSIQL 181 (212)
T ss_dssp CCGGGGCSSSHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHhCCCHHHHHHHHHHHHHHHCCCc
Confidence 3999999999999999999999999988
No 357
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=95.81 E-value=0.0035 Score=48.70 Aligned_cols=30 Identities=10% Similarity=0.006 Sum_probs=27.9
Q ss_pred ccccccccCCchhHHHHHHHHHhhhhceee
Q 042694 33 RSIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 33 ~~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+.+|+++|+|||.+++|...|+++||+.+
T Consensus 29 ~~~~~~dlG~DSL~~vel~~~le~~fgi~i 58 (83)
T 1or5_A 29 LDTPFVDLGYDSLALLETAAVLQQRYGIAL 58 (83)
T ss_dssp SSSCHHHHSCCHHHHHHHHHHHHTTSCCCC
T ss_pred CCCcHHHhCCCHHHHHHHHHHHHHHHCCcc
Confidence 455799999999999999999999999998
No 358
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=95.76 E-value=0.0044 Score=47.82 Aligned_cols=27 Identities=4% Similarity=-0.080 Sum_probs=26.1
Q ss_pred ccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|| ++|+|||.+++|...|+++||+.+
T Consensus 31 ~l~~dlG~DSl~~~el~~~le~~fgi~i 58 (81)
T 2lol_A 31 RFIEDLKADSLDTVELMMAIEVEYGIDI 58 (81)
T ss_dssp CHHHHTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred cHHHhcCCcHHHHHHHHHHHHHHHCCCC
Confidence 896 999999999999999999999998
No 359
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=95.70 E-value=0.0058 Score=46.89 Aligned_cols=29 Identities=7% Similarity=-0.001 Sum_probs=27.0
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| +++|+|||.+++|...|+++||+.+
T Consensus 28 ~~~l~~~lG~DSl~~~~l~~~le~~fgi~i 57 (80)
T 1x3o_A 28 EARFIEDLGADSLDTVELIMGLEDEFGLEI 57 (80)
T ss_dssp TCBTTTTTCCCHHHHHHHHHHHHHHHCCCC
T ss_pred cCcHHhhcCccHHHHHHHHHHHHHHHCCCc
Confidence 3389 9999999999999999999999998
No 360
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.65 E-value=0.015 Score=53.13 Aligned_cols=35 Identities=11% Similarity=0.140 Sum_probs=28.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
-.+++|+||||+|-+|..+++.+...|. +|+..+.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~ 71 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAG 71 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEES
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeC
Confidence 4678999999999999999999888774 5665543
No 361
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.59 E-value=0.0074 Score=55.87 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=25.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|+|+||+|++|+.+++.|++.+.+ |++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~---V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCE---EEEEe
Confidence 47999999999999999999987754 44444
No 362
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=95.42 E-value=0.0058 Score=48.92 Aligned_cols=29 Identities=7% Similarity=-0.075 Sum_probs=27.4
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+++|+|||.+++|...|+++||+.+
T Consensus 31 d~~~~dlG~DSL~~vel~~~le~~fgi~i 59 (95)
T 1nq4_A 31 DVAFDALGYDSLALLNTVGRIERDYGVQL 59 (95)
T ss_dssp SSCHHHHTCCSHHHHHHHHHHHHHTCCCS
T ss_pred CCChhhhCCCHHHHHHHHHHHHHHHCCcc
Confidence 34999999999999999999999999998
No 363
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=95.41 E-value=0.0049 Score=57.31 Aligned_cols=27 Identities=4% Similarity=-0.071 Sum_probs=26.5
Q ss_pred cccccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+||++|+|||.+++|.++|+++||+.+
T Consensus 51 ~f~~lG~DSl~~~el~~~l~~~~g~~l 77 (212)
T 2l22_A 51 RFLELGLDSVIAAQWIREINKHYQLKI 77 (212)
T ss_dssp BHHHHTCCHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHhCCcHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999998
No 364
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=95.39 E-value=0.0065 Score=47.72 Aligned_cols=27 Identities=4% Similarity=-0.075 Sum_probs=25.7
Q ss_pred cccc-cCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQ-GGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~-~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|++ +|+|||.+++|...|+++||+.+
T Consensus 27 ~~~d~lg~DSL~~veli~~ie~~fgi~i 54 (87)
T 2kjs_A 27 SANDIDAWDSLSHMNLIVSLEVHYKIKF 54 (87)
T ss_dssp CSTTCSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred CcccCCCCChHHHHHHHHHHHHHhCcee
Confidence 8888 69999999999999999999998
No 365
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.38 E-value=0.074 Score=52.68 Aligned_cols=114 Identities=12% Similarity=0.036 Sum_probs=63.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH---HcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ---TYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~---~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+++|.|+|| |.+|..++..|+..+. +..++++|.. .++++. ...... . ....+....+|.
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~-~~k~~g~a~DL~~~~-~-~~~~~~i~~~~~----------- 71 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIF-KDKTKGDAIDLEDAL-P-FTSPKKIYSAEY----------- 71 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSC-HHHHHHHHHHHHTTG-G-GSCCCEEEECCG-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCC-hHHHHHHHhhHhhhh-h-hcCCcEEEECcH-----------
Confidence 4578999996 9999999999988653 4578888752 122221 111100 1 113444444432
Q ss_pred HHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 186 ADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++++|+||++|+..+- .+.-.++.+.|+.-.+.+.+.+.+. ..+.++.+-|
T Consensus 72 --~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvt 125 (326)
T 3vku_A 72 --SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAA 125 (326)
T ss_dssp --GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT-TCCSEEEECS
T ss_pred --HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence 125799999999987432 3445678899999999999998874 4455554444
No 366
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.34 E-value=0.075 Score=52.66 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=72.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH---HcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ---TYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~---~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|| |.+|..++..|+..+. +..|+++|... ++++. ..... .......+....+|.
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~-~k~~g~a~DL~~~-~~~~~~~v~i~~~~~------------ 68 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNK-EKAMGDVMDLNHG-KAFAPQPVKTSYGTY------------ 68 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH-HHHHHHHHHHHHT-GGGSSSCCEEEEECG------------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecch-HHHHHHHHHHHhc-cccccCCeEEEeCcH------------
Confidence 578999996 9999999999988764 45788887521 12211 11000 011112344444432
Q ss_pred HHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 187 DVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++++|+||.+|+..+- .+.-..+...|+.-.+.+++...+. ..+.++.+-|
T Consensus 69 -~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvt 122 (326)
T 3pqe_A 69 -EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVAT 122 (326)
T ss_dssp -GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcC
Confidence 134789999999987432 3446678899999999999999875 4455555444
No 367
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=95.30 E-value=0.0096 Score=48.59 Aligned_cols=29 Identities=10% Similarity=-0.032 Sum_probs=27.4
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+++|.|||.+++|...|+++||+.+
T Consensus 47 d~~l~dlGlDSL~~veLv~~lE~~fgI~i 75 (105)
T 2jq4_A 47 EADLYAAGLSSFASVQLMLGIEEAFDIEF 75 (105)
T ss_dssp TSCGGGGTCCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCHhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 34999999999999999999999999998
No 368
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.07 E-value=0.059 Score=46.17 Aligned_cols=73 Identities=14% Similarity=0.235 Sum_probs=50.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH-
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI- 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l- 189 (554)
++|+|.|+ |.+|..+++.|.+.+.+| .++-.+....+.+++ ..+.++.||.+++ +.+...
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v-~vid~~~~~~~~~~~-----------~g~~~i~gd~~~~------~~l~~a~ 68 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPL-VVIETSRTRVDELRE-----------RGVRAVLGNAANE------EIMQLAH 68 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCE-EEEESCHHHHHHHHH-----------TTCEEEESCTTSH------HHHHHTT
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCE-EEEECCHHHHHHHHH-----------cCCCEEECCCCCH------HHHHhcC
Confidence 47999996 999999999999887754 333333333333332 2456799999887 666554
Q ss_pred hcCccEEEEcCCC
Q 042694 190 AKEVDVIVNSAAN 202 (554)
Q Consensus 190 ~~~vdiViH~AA~ 202 (554)
.+++|+|+-+...
T Consensus 69 i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 69 LECAKWLILTIPN 81 (140)
T ss_dssp GGGCSEEEECCSC
T ss_pred cccCCEEEEECCC
Confidence 4689999987553
No 369
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=95.07 E-value=0.011 Score=45.53 Aligned_cols=29 Identities=7% Similarity=-0.071 Sum_probs=27.1
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| +++|+|||.+++|...|+++||+.+
T Consensus 30 ~~~l~~dlG~DSl~~vel~~~le~~fgi~i 59 (81)
T 1f80_D 30 EASFKEDLGADXLDVVELVMELEDEFDMEI 59 (81)
T ss_dssp TCBHHHHSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred ccchHHHcCCcHHHHHHHHHHHHHHhCCcc
Confidence 3388 9999999999999999999999998
No 370
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.02 E-value=0.042 Score=55.55 Aligned_cols=72 Identities=13% Similarity=0.212 Sum_probs=50.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+++|+|.|+ |++|+.+++.|++. . .|.+.++. .+++.+.. ++...+..|+.+. ++++.
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~---~V~V~~R~-~~~a~~la---------~~~~~~~~d~~~~------~~l~~ 73 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-F---DVYIGDVN-NENLEKVK---------EFATPLKVDASNF------DKLVE 73 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESC-HHHHHHHT---------TTSEEEECCTTCH------HHHHH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-C---eEEEEECC-HHHHHHHH---------hhCCeEEEecCCH------HHHHH
Confidence 4679999996 99999999999985 3 55555543 23443322 2234466787665 78888
Q ss_pred HhcCccEEEEcCC
Q 042694 189 IAKEVDVIVNSAA 201 (554)
Q Consensus 189 l~~~vdiViH~AA 201 (554)
+++++|+||+|..
T Consensus 74 ll~~~DvVIn~~P 86 (365)
T 2z2v_A 74 VMKEFELVIGALP 86 (365)
T ss_dssp HHTTCSCEEECCC
T ss_pred HHhCCCEEEECCC
Confidence 8999999999853
No 371
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=94.91 E-value=0.011 Score=46.04 Aligned_cols=29 Identities=14% Similarity=0.038 Sum_probs=27.3
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+++|.|||.++.|...|+++||+.+
T Consensus 32 ~~~l~dlG~DSL~~vel~~~le~~fgi~i 60 (86)
T 1af8_A 32 DLRFEDIGYDSLALMETAARLESRYGVSI 60 (86)
T ss_dssp TTSTTTTTCCTTTHHHHHHHHTTTTCSCC
T ss_pred CCChhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 44899999999999999999999999998
No 372
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=94.91 E-value=0.015 Score=45.97 Aligned_cols=27 Identities=15% Similarity=0.010 Sum_probs=26.5
Q ss_pred cccccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.|+++|-|||.++.|.++|++.||+.+
T Consensus 32 ~l~dLG~DSL~aVELr~~Le~~fgi~l 58 (91)
T 2cg5_B 32 SLADLGLDALMSVEVRQTLERELNLVL 58 (91)
T ss_dssp BTTTTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHhCCcchHHHHHHHHHHHHHCCCC
Confidence 899999999999999999999999998
No 373
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.91 E-value=0.014 Score=47.04 Aligned_cols=28 Identities=7% Similarity=-0.056 Sum_probs=26.4
Q ss_pred cccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+|| ++|+|||.+++|...|+++||+.+
T Consensus 39 ~~l~~dlG~DSL~~vel~~~le~~fgi~i 67 (99)
T 2dnw_A 39 SHFMKDLGLDSLDQVEIIMAMEDEFGFEI 67 (99)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CchhhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence 3886 999999999999999999999998
No 374
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.75 E-value=0.04 Score=55.81 Aligned_cols=74 Identities=9% Similarity=0.233 Sum_probs=50.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+|+|+ |-+|..+++.|...|. +|++.+... .+.+.+..+ .. +.+|..+. ++
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga---~V~~~d~~~~~~~~~~~~~g--------~~---~~~~~~~~------~~ 222 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGA---QVTILDVNHKRLQYLDDVFG--------GR---VITLTATE------AN 222 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTT--------TS---EEEEECCH------HH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCHHHHHHHHHhcC--------ce---EEEecCCH------HH
Confidence 46789999999 9999999999988775 566665432 222222221 12 33455444 67
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
+..+.+++|+||++++.
T Consensus 223 l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 223 IKKSVQHADLLIGAVLV 239 (369)
T ss_dssp HHHHHHHCSEEEECCC-
T ss_pred HHHHHhCCCEEEECCCC
Confidence 77777899999999875
No 375
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.64 E-value=0.03 Score=55.95 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=26.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|+|.||||++|+.|++.|+++++....++.+.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 5799999999999999999986544333555443
No 376
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.62 E-value=0.26 Score=46.78 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=66.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++-.++++|+|.|+.| +|+.+++.|.+.| |+++.++|... .+++++..+
T Consensus 23 q~~l~~~~VlvvG~Gg-lG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 96 (251)
T 1zud_1 23 QQKLLDSQVLIIGLGG-LGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP--- 96 (251)
T ss_dssp HHHHHTCEEEEECCST-THHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhcCcEEEEccCH-HHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 3446788999999866 9999999999865 56888775321 111111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-++..+..++. ++....+.++.|+||.+... +. .-..+-++|.+. -+++|+.
T Consensus 97 ----~~~v~~~~~~~~-------~~~~~~~~~~~DvVi~~~d~--~~------------~r~~l~~~~~~~--~~p~i~~ 149 (251)
T 1zud_1 97 ----DIQLTALQQRLT-------GEALKDAVARADVVLDCTDN--MA------------TRQEINAACVAL--NTPLITA 149 (251)
T ss_dssp ----TSEEEEECSCCC-------HHHHHHHHHHCSEEEECCSS--HH------------HHHHHHHHHHHT--TCCEEEE
T ss_pred ----CCEEEEEeccCC-------HHHHHHHHhcCCEEEECCCC--HH------------HHHHHHHHHHHh--CCCEEEE
Confidence 124555554443 35667777899999998543 21 112355666652 3578887
Q ss_pred eeceecc
Q 042694 240 STAYVNG 246 (554)
Q Consensus 240 ST~~v~~ 246 (554)
++....|
T Consensus 150 ~~~g~~G 156 (251)
T 1zud_1 150 SAVGFGG 156 (251)
T ss_dssp EEEBTEE
T ss_pred eccccce
Confidence 7654433
No 377
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=94.62 E-value=0.016 Score=44.58 Aligned_cols=29 Identities=21% Similarity=0.102 Sum_probs=27.0
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+ ++|.|||.++.|...|+++||+.+
T Consensus 28 d~~l~~dlg~DSl~~vel~~~le~~fgi~i 57 (81)
T 3gzm_A 28 NSNFTKDLGADSLDLVELIMALEEKFNVTI 57 (81)
T ss_dssp TCBHHHHSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred CCcchhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 44896 999999999999999999999998
No 378
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.49 E-value=0.098 Score=49.75 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=65.6
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------------------HHHHHHHcCCchhhhcc
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------------------FKCLKQTYGKSYQAFML 164 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------------------~~~l~~~~~~~~~~~~~ 164 (554)
+-.++++|+|.|+ |-+|+.+++.|.+.| |++|.++|... .+.+.+..... ...
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~---np~ 100 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI---NPH 100 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH---CTT
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH---CCC
Confidence 3467789999997 669999999999976 56788776432 11111111000 011
Q ss_pred CcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 165 SKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 165 ~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
-++..+..++. ++....+.+++|+||.+... +. .-..+.++|.+. + +++|+.++..
T Consensus 101 ~~v~~~~~~~~-------~~~~~~~~~~~DvVi~~~d~--~~------------~~~~l~~~~~~~-~-~p~i~~~~~g 156 (249)
T 1jw9_B 101 IAITPVNALLD-------DAELAALIAEHDLVLDCTDN--VA------------VRNQLNAGCFAA-K-VPLVSGAAIR 156 (249)
T ss_dssp SEEEEECSCCC-------HHHHHHHHHTSSEEEECCSS--HH------------HHHHHHHHHHHH-T-CCEEEEEEEB
T ss_pred cEEEEEeccCC-------HhHHHHHHhCCCEEEEeCCC--HH------------HHHHHHHHHHHc-C-CCEEEeeecc
Confidence 24566666554 35566677899999998643 21 112355666663 3 4677765543
No 379
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.47 E-value=0.31 Score=47.31 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=30.5
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
++-.+..+|+|.|+ |-+|+.+++.|.+.| |++|.++|.
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~ 68 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDY 68 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECC
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECC
Confidence 34467789999997 559999999999976 678888764
No 380
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.44 E-value=0.41 Score=47.66 Aligned_cols=120 Identities=18% Similarity=0.060 Sum_probs=71.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc-----cEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDV-----GKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V-----~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.-+|.||||+|.+|+.|+-.|.. ++-+ ..+.++|.. ..+.++-..-+...-........+.++
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~---------- 92 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA---------- 92 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES----------
T ss_pred CCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC----------
Confidence 45899999999999999987765 3322 267777743 222222110000000011111122221
Q ss_pred HHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 184 DLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+. ...++++|+||-+|+..+ ..+.-.++.+.|..=.+.+.+...+......+|.|-|
T Consensus 93 ~~-~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 93 DP-RVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp CH-HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred Ch-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 12 234689999999999754 3456778999999999999998876433334444433
No 381
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=94.30 E-value=0.021 Score=44.02 Aligned_cols=29 Identities=14% Similarity=0.019 Sum_probs=26.7
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|| ++|.|||.+++|...|+++||+.+
T Consensus 30 d~~l~~dlG~DSl~~vel~~~le~~fgi~i 59 (82)
T 2qnw_A 30 ESNFIKDLDADSLDSVELVMAFEEKFGVSI 59 (82)
T ss_dssp TCBHHHHSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred ccchhhccCCcHHHHHHHHHHHHHHHCCcC
Confidence 34885 999999999999999999999998
No 382
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=94.28 E-value=0.021 Score=47.35 Aligned_cols=29 Identities=3% Similarity=-0.100 Sum_probs=26.8
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|| ++|+|||.+++|...|+++||+.+
T Consensus 30 d~~l~~dlG~DSL~~vel~~~lE~~fgi~i 59 (115)
T 1klp_A 30 EKSFVDDLDIDSLSMVEIAVQTEDKYGVKI 59 (115)
T ss_dssp TCCTTTTTCSHHHHHHHHHHHHHHHTCCCC
T ss_pred CCchhhccCCCHHHHHHHHHHHHHHHCCCC
Confidence 33896 999999999999999999999998
No 383
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.23 E-value=0.071 Score=52.80 Aligned_cols=76 Identities=18% Similarity=0.135 Sum_probs=46.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|+||||+|-+|..+++.+...|. +|+..+.. ..+.+++ .+. .. ..|..+.++ .+.
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~~~~~~~~~~~-~g~-------~~----~~~~~~~~~---~~~ 200 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTAQKAQSALK-AGA-------WQ----VINYREEDL---VER 200 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSHHHHHHHHH-HTC-------SE----EEETTTSCH---HHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHH-cCC-------CE----EEECCCccH---HHH
Confidence 3578999999999999999999988774 56665432 2233332 211 11 125544311 123
Q ss_pred HHHHh--cCccEEEEcCC
Q 042694 186 ADVIA--KEVDVIVNSAA 201 (554)
Q Consensus 186 ~~~l~--~~vdiViH~AA 201 (554)
..... .++|+||++++
T Consensus 201 ~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 201 LKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp HHHHTTTCCEEEEEECSC
T ss_pred HHHHhCCCCceEEEECCc
Confidence 33333 26999999998
No 384
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=94.14 E-value=0.33 Score=48.80 Aligned_cols=120 Identities=19% Similarity=0.164 Sum_probs=71.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcchh-HHHHHHHcCCchhhh--ccCcEEEEEccCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAEL-FKCLKQTYGKSYQAF--MLSKLVPAVGNVCENNL 179 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~~-~~~l~~~~~~~~~~~--~~~kv~~v~GDl~~~~l 179 (554)
-+..+|.||||+|.+|.+++-.|+..+ -+. .++.++.+. .+.++-..-+..... ....+.+. +
T Consensus 30 ~~~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~--~------ 100 (375)
T 7mdh_A 30 KKLVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--I------ 100 (375)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--S------
T ss_pred CCCCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe--c------
Confidence 356789999999999999999998743 222 233454332 222222111000000 11222221 1
Q ss_pred CCCHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 180 GLEEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 180 GLs~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
.+++. ++++|+||-+|+..+ ..+.-.++.+.|+.=.+.+.+...+..+...++.+-|
T Consensus 101 ----~~y~~-~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 101 ----DPYEV-FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp ----CHHHH-TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----CCHHH-hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 23433 479999999988654 3456778899999999999988887423344444444
No 385
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.10 E-value=0.11 Score=51.64 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=47.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|+||||+|-+|..+++.+...|. +|+..+.. ..+.+++ .+. +. ..|..+.++ .+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~~~~~~~~~~-~g~-------~~----~~d~~~~~~---~~~ 205 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVSTEEKAETARK-LGC-------HH----TINYSTQDF---AEV 205 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESSHHHHHHHHH-HTC-------SE----EEETTTSCH---HHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH-cCC-------CE----EEECCCHHH---HHH
Confidence 3578999999999999999998887664 56665532 2233332 211 11 125544311 133
Q ss_pred HHHHh--cCccEEEEcCCC
Q 042694 186 ADVIA--KEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~--~~vdiViH~AA~ 202 (554)
...+. .++|+||++++.
T Consensus 206 i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 206 VREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp HHHHHTTCCEEEEEECSCT
T ss_pred HHHHhCCCCCeEEEECCcH
Confidence 33333 269999999985
No 386
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.03 E-value=0.085 Score=52.38 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=46.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCC-CCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCE-NNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~-~~lGLs~~ 184 (554)
-.+++|+||||+|-+|..+++.+...|. +|++.+.. ..+.+ +..+. . ...|..+ .++ .+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~~~~~~~~-~~~g~--------~---~~~d~~~~~~~---~~ 205 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSDEKIAYL-KQIGF--------D---AAFNYKTVNSL---EE 205 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC---EEEEEESSHHHHHHH-HHTTC--------S---EEEETTSCSCH---HH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHHHHH-HhcCC--------c---EEEecCCHHHH---HH
Confidence 4678999999999999999998887664 56665432 22223 22211 1 1236554 211 12
Q ss_pred HHHHHh-cCccEEEEcCC
Q 042694 185 LADVIA-KEVDVIVNSAA 201 (554)
Q Consensus 185 ~~~~l~-~~vdiViH~AA 201 (554)
....+. .++|+||++++
T Consensus 206 ~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp HHHHHCTTCEEEEEESSC
T ss_pred HHHHHhCCCCeEEEECCC
Confidence 233332 26999999998
No 387
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=93.96 E-value=0.0042 Score=47.65 Aligned_cols=29 Identities=14% Similarity=0.039 Sum_probs=27.0
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| +++|+|||.+++|...|+++||+.+
T Consensus 27 ~~~l~~~lG~DSl~~~~l~~~le~~fgi~i 56 (79)
T 2l3v_A 27 GASFIDDLGADSLDTVELVMAFEEEFGVEI 56 (79)
T ss_dssp TCCHHHHTCCCSSSSSSTTTTHHHHTTCCC
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHCCCC
Confidence 3389 9999999999999999999999998
No 388
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=93.88 E-value=0.031 Score=44.76 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=26.9
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+ ++|.|||.++.|...|+++||+.+
T Consensus 45 d~~l~~dLGlDSL~~vel~~~lE~~fgi~i 74 (97)
T 3ejb_A 45 NASFVEDLGADSLDTVELVMALEEEFDTEI 74 (97)
T ss_dssp TCBTTTTTCCCTTHHHHHHHHHHHHTTCCC
T ss_pred CCCchhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence 33897 999999999999999999999998
No 389
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=93.83 E-value=0.034 Score=42.97 Aligned_cols=29 Identities=17% Similarity=0.003 Sum_probs=27.0
Q ss_pred ccccc-ccCC-chhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGG-KTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG-~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+ ++|+ |||.+++|...|+++||+.+
T Consensus 27 d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i 57 (83)
T 2amw_A 27 SSVLLGNIPELDSMAVVNVITALEEYFDFSV 57 (83)
T ss_dssp TSCSTTTSTTTTHHHHHHHHHHHHHHTTCCC
T ss_pred cchhhhccCccCHHHHHHHHHHHHHHhCCee
Confidence 34899 6999 99999999999999999998
No 390
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.47 E-value=0.066 Score=53.59 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=26.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+++|.|.||||++|+.+++.|++. +.+ .++.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~ 36 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVT 36 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEB
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEE
Confidence 468999999999999999999864 666 455443
No 391
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.37 E-value=0.12 Score=51.54 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=46.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCC-CCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCEN-NLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~-~lGLs~~ 184 (554)
-.+++||||||+|-+|..+++.+...+. +|+..+. ...+.+++ .+. . . ..|..+. ++ .+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~~~~~~~~~-~g~-------~--~--~~d~~~~~~~---~~ 229 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGEGKEELFRS-IGG-------E--V--FIDFTKEKDI---VG 229 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSTTHHHHHHH-TTC-------C--E--EEETTTCSCH---HH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCHHHHHHHHH-cCC-------c--e--EEecCccHhH---HH
Confidence 4678999999999999999988887664 5665542 22233322 211 1 1 1265532 11 12
Q ss_pred HHHHHhc-CccEEEEcCCC
Q 042694 185 LADVIAK-EVDVIVNSAAN 202 (554)
Q Consensus 185 ~~~~l~~-~vdiViH~AA~ 202 (554)
....+.. ++|+||++++.
T Consensus 230 ~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 230 AVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp HHHHHHTSCEEEEEECSSC
T ss_pred HHHHHhCCCCCEEEECCCc
Confidence 2333332 69999999874
No 392
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.28 E-value=0.44 Score=47.67 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=67.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++-.++.+|+|.|+ |-+|+.+++.|.+.| |+++.++|... .+++++..+
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 186 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS--- 186 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---
Confidence 56678899999998 559999999999976 67888775321 122222221
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHH-HHHHHHHcCCCceEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCR-LMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~-ll~la~~~~~~k~~v~ 238 (554)
.-+++++..++... .+... .+++|+|+.+... +. .++. +-++|.+. -+++|+
T Consensus 187 ----~v~v~~~~~~i~~~------~~~~~-~~~~DlVvd~~Dn--~~------------~~r~~ln~~c~~~--~~p~i~ 239 (353)
T 3h5n_A 187 ----EISVSEIALNINDY------TDLHK-VPEADIWVVSADH--PF------------NLINWVNKYCVRA--NQPYIN 239 (353)
T ss_dssp ----TSEEEEEECCCCSG------GGGGG-SCCCSEEEECCCC--ST------------THHHHHHHHHHHT--TCCEEE
T ss_pred ----CCeEEEeecccCch------hhhhH-hccCCEEEEecCC--hH------------HHHHHHHHHHHHh--CCCEEE
Confidence 23677788887765 32344 6799999997532 21 1222 44667663 357887
Q ss_pred Eeec
Q 042694 239 VSTA 242 (554)
Q Consensus 239 vST~ 242 (554)
.+..
T Consensus 240 ~~~~ 243 (353)
T 3h5n_A 240 AGYV 243 (353)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7653
No 393
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=93.28 E-value=0.039 Score=42.64 Aligned_cols=29 Identities=7% Similarity=-0.197 Sum_probs=26.9
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| .++|.|||.+++|...|+++||+.+
T Consensus 32 ~~~l~~dlG~DSl~~vel~~~le~~fgi~i 61 (84)
T 2kwl_A 32 DSRFVEDLNADSLDIYELLYLLEEAFDDKI 61 (84)
T ss_dssp TTHHHHTSSSCHHHHHHHHHHHHHHHTCCT
T ss_pred CCchhhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 3388 8999999999999999999999998
No 394
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.28 E-value=0.12 Score=51.73 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=27.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
-.+++|+||||+|-+|..+++.+...|. +|+..+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~ 202 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL---KILGTA 202 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEe
Confidence 3578999999999999999988887664 566654
No 395
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=93.14 E-value=0.041 Score=55.16 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=26.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC-----CccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP-----DVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~-----~V~~i~~~~ 144 (554)
+++|+|.||||++|+.|++.|++. + .+ ++..+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~-ei~~l~ 46 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRL-RIGALT 46 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSE-EEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccE-EEEEEE
Confidence 478999999999999999999874 4 55 455543
No 396
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.13 E-value=0.12 Score=51.74 Aligned_cols=78 Identities=19% Similarity=0.107 Sum_probs=46.7
Q ss_pred ccC--cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKA--KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~--~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
-.+ ++|+||||+|-+|..+++.+...|. ++|+..+.. ..+.+++..+. . ...|..+.++ .
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~~~~~~~~~~~~g~-------~----~~~d~~~~~~---~ 220 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGTHEKCILLTSELGF-------D----AAINYKKDNV---A 220 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCC-------S----EEEETTTSCH---H
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHcCC-------c----eEEecCchHH---H
Confidence 357 8999999999999999988887664 256665432 22333322221 1 1125544311 1
Q ss_pred HHHHHHhc-CccEEEEcCC
Q 042694 184 DLADVIAK-EVDVIVNSAA 201 (554)
Q Consensus 184 ~~~~~l~~-~vdiViH~AA 201 (554)
+....+.. ++|+||++++
T Consensus 221 ~~~~~~~~~~~d~vi~~~G 239 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVG 239 (357)
T ss_dssp HHHHHHCTTCEEEEEESCC
T ss_pred HHHHHhcCCCCCEEEECCC
Confidence 22333322 6999999998
No 397
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.10 E-value=0.14 Score=51.33 Aligned_cols=77 Identities=9% Similarity=0.094 Sum_probs=46.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|+||||+|-+|..+++.+...|. +|++.+.. ..+.+++ .+. + ...|..+.++ .+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~-~g~-------~----~~~~~~~~~~---~~~ 222 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGSQKKLQMAEK-LGA-------A----AGFNYKKEDF---SEA 222 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHH-HTC-------S----EEEETTTSCH---HHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHH-cCC-------c----EEEecCChHH---HHH
Confidence 3578999999999999999988887664 56665432 2222322 211 1 1124444311 123
Q ss_pred HHHHhc--CccEEEEcCCC
Q 042694 186 ADVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~--~vdiViH~AA~ 202 (554)
...+.. ++|+||++++.
T Consensus 223 ~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 223 TLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp HHHHTTTSCEEEEEESSCG
T ss_pred HHHHhcCCCceEEEECCCc
Confidence 333332 69999999984
No 398
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.95 E-value=0.17 Score=49.78 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=49.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++|+|| |-+|+.++..|.+.|. ++|++.++.. .++..+.... .......++.+ .++.+. ++
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~~~a~~la~~-~~~~~~~~~~~--~~~~~~------~~ 219 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFYANAEKTVEK-INSKTDCKAQL--FDIEDH------EQ 219 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHH-HHHHSSCEEEE--EETTCH------HH
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchHHHHHHHHHH-hhhhcCCceEE--eccchH------HH
Confidence 46899999997 7789999999998764 4677665431 2333322111 00001112332 344333 55
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
+.....++|+||++...
T Consensus 220 l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 220 LRKEIAESVIFTNATGV 236 (315)
T ss_dssp HHHHHHTCSEEEECSST
T ss_pred HHhhhcCCCEEEECccC
Confidence 66667789999998754
No 399
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.86 E-value=0.1 Score=48.96 Aligned_cols=71 Identities=7% Similarity=-0.014 Sum_probs=49.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.++|+|.|+ |.+|+.+++.|.+.+. |++++... +++... . ..+.++.||.+++ +.+...
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~-~~~~~~--------~-~~~~~i~gd~~~~------~~l~~a 67 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDEN-VRKKVL--------R-SGANFVHGDPTRV------SDLEKA 67 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGG-GHHHHH--------H-TTCEEEESCTTCH------HHHHHT
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCH-HHHHHH--------h-cCCeEEEcCCCCH------HHHHhc
Confidence 457999997 9999999999987653 44454321 122111 1 2467899999887 777665
Q ss_pred -hcCccEEEEcCC
Q 042694 190 -AKEVDVIVNSAA 201 (554)
Q Consensus 190 -~~~vdiViH~AA 201 (554)
.+++|.||-+..
T Consensus 68 ~i~~ad~vi~~~~ 80 (234)
T 2aef_A 68 NVRGARAVIVDLE 80 (234)
T ss_dssp TCTTCSEEEECCS
T ss_pred CcchhcEEEEcCC
Confidence 679999998754
No 400
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.71 E-value=0.45 Score=46.64 Aligned_cols=114 Identities=12% Similarity=0.042 Sum_probs=66.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCch-hhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSY-QAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~-~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|.|+|| |.+|..++..|+..+. + .|.++|... .+.......... ......++.. ..|.
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d~------------- 65 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNY------------- 65 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCG-------------
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCCH-------------
Confidence 58999998 9999999999987653 3 377776421 111111111000 0001122221 1332
Q ss_pred HHhcCccEEEEcCCCCCch-hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 188 VIAKEVDVIVNSAANTTFD-ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
..++++|+||.+++...-. ..-..+...|+.-.+++.+.+.+. ....++.+.|.
T Consensus 66 ~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 120 (309)
T 1ur5_A 66 ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVNN 120 (309)
T ss_dssp GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECCS
T ss_pred HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcCC
Confidence 1257899999999864321 122355677888888898888875 46677766664
No 401
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=92.60 E-value=0.11 Score=50.14 Aligned_cols=27 Identities=26% Similarity=0.357 Sum_probs=22.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
.++|.|+|+||.+|+.+++.+++. +++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~-~~~ 31 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL-EGV 31 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCC
Confidence 468999999999999999998763 444
No 402
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=92.57 E-value=0.094 Score=51.38 Aligned_cols=30 Identities=27% Similarity=0.280 Sum_probs=26.5
Q ss_pred ccCcE-EEEe-ccc-----------------ccccHHHHHHHHhhCCCc
Q 042694 108 LKAKN-FFVT-GAT-----------------GFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 108 ~~~~~-VlIT-GaT-----------------GFlG~~Ll~~LL~~~~~V 137 (554)
..|++ |||| ||| |-.|..+++.+++.|.+|
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V 82 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGV 82 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEE
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEE
Confidence 57888 9999 777 999999999999999865
No 403
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.56 E-value=0.55 Score=45.64 Aligned_cols=113 Identities=13% Similarity=0.012 Sum_probs=69.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH---HcCCchhhh-ccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ---TYGKSYQAF-MLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~---~~~~~~~~~-~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
|+|.|+|| |.+|..++..|+..+. +..|.+++... +++.. ......... ...++.. ..|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~-~~~~g~~~dl~~~~~~~~~~~~i~~-t~d------------- 63 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAE-DLAVGEAMDLAHAAAGIDKYPKIVG-GAD------------- 63 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSH-HHHHHHHHHHHHHHHTTTCCCEEEE-ESC-------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCh-HHHHHHHHHHHhhhhhcCCCCEEEE-eCC-------------
Confidence 57999999 9999999999888764 45778776432 11110 000000000 1112221 223
Q ss_pred HHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 187 DVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
...++++|+||-+|+..+ ..+.-.++...|+.-.+.+.+...+. +...++.+=|
T Consensus 64 ~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 64 YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 123578999999998753 23445677899999999999998875 4555544444
No 404
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.44 E-value=1.2 Score=43.28 Aligned_cols=114 Identities=13% Similarity=-0.054 Sum_probs=72.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhhccCcEEEE-EccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAFMLSKLVPA-VGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~~~~kv~~v-~GDl~~~~lGLs~~~~~ 187 (554)
|+|-|+|| |.+|+.+...|+.++ -+..+.++|... ++.+-..-+.. ........... .+|..
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~-~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~------------ 65 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAE-DLAVGEAMDLAHAAAGIDKYPKIVGGADYS------------ 65 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSH-HHHHHHHHHHHHHHGGGTCCCEEEEESCGG------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCC-CcchhhhhhhhcccccCCCCCeEecCCCHH------------
Confidence 57999996 999999999988764 567888887421 11111100000 00011122222 22321
Q ss_pred HHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 188 VIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
.++++|+|+-.|+..+ ..+.-.++...|..=.+.+.+.+.+. ..+.++.+=|
T Consensus 66 -~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvs 118 (294)
T 2x0j_A 66 -LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp -GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred -HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 2478999999999754 45577788999999999999998875 5556655554
No 405
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.12 E-value=0.42 Score=47.09 Aligned_cols=115 Identities=13% Similarity=0.069 Sum_probs=69.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHH---HHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLK---QTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~---~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|| |++|..++..|+..+. +..|+++|... +++. ....... . ....+.+..+| +
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~-~~~~g~~~dl~~~~-~-~~~~~~i~~~~------------~ 69 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFK-EKAIGEAMDINHGL-P-FMGQMSLYAGD------------Y 69 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC----CCHHHHHHTTSC-C-CTTCEEEC--C------------G
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh-HHHHHHHHHHHHhH-H-hcCCeEEEECC------------H
Confidence 468999998 9999999999988653 56788887431 1111 1111100 0 11222222111 1
Q ss_pred HHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 187 DVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
+ -++++|+||.+++... ....-.++...|+.-.+++++...+. ....++.+.|.-
T Consensus 70 ~-a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP 125 (318)
T 1y6j_A 70 S-DVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP 125 (318)
T ss_dssp G-GGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred H-HhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence 1 2579999999998643 22334467788999999999999875 456666665543
No 406
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=92.00 E-value=0.28 Score=47.10 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=26.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+++|.|.||+|.+|+.+++.+.+ .++++-+-.++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~-~~~~eLv~~~d 40 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLA-APDATLVGALD 40 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHH-CTTEEEEEEBC
T ss_pred ccEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEE
Confidence 46899999999999999999987 46663333444
No 407
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.99 E-value=0.15 Score=50.71 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=46.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCC-CCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCEN-NLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~-~lGLs~~ 184 (554)
-.+++|+|+||+|-+|..+++.+...|. +|+..+.. ..+.+++..+. .. . .|..+. ++ .+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~~~~~~~~~~~~g~-------~~--~--~d~~~~~~~---~~ 216 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGSKEKVDLLKTKFGF-------DD--A--FNYKEESDL---TA 216 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHTSCC-------SE--E--EETTSCSCS---HH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHcCC-------ce--E--EecCCHHHH---HH
Confidence 3578999999999999999988877663 56665532 22333322221 11 1 254432 11 23
Q ss_pred HHHHHh-cCccEEEEcCC
Q 042694 185 LADVIA-KEVDVIVNSAA 201 (554)
Q Consensus 185 ~~~~l~-~~vdiViH~AA 201 (554)
....+. .++|+||++++
T Consensus 217 ~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp HHHHHCTTCEEEEEESSC
T ss_pred HHHHHhCCCCcEEEECCC
Confidence 333333 36999999987
No 408
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.87 E-value=0.32 Score=48.38 Aligned_cols=76 Identities=12% Similarity=0.123 Sum_probs=46.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|||+||+|-+|..+++.+...+. +|+..+. ...+.+++ .+. +. . .|..++++ .+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~~~~~~~~~~-~ga-------~~--~--~d~~~~~~---~~~ 226 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGSEDKLRRAKA-LGA-------DE--T--VNYTHPDW---PKE 226 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESSHHHHHHHHH-HTC-------SE--E--EETTSTTH---HHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHh-cCC-------CE--E--EcCCcccH---HHH
Confidence 3578999999999999999988877664 5665543 22233332 211 11 1 25554411 133
Q ss_pred HHHHh--cCccEEEEcCC
Q 042694 186 ADVIA--KEVDVIVNSAA 201 (554)
Q Consensus 186 ~~~l~--~~vdiViH~AA 201 (554)
+..+. .++|+||++++
T Consensus 227 ~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp HHHHTTTTCEEEEEESSC
T ss_pred HHHHhCCCCceEEEECCC
Confidence 44443 26999999998
No 409
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.81 E-value=0.2 Score=49.69 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=45.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+||||+|-+|..+++.+...|. +|+..+.. ..+.+.+..+. .. ..|..++++ .+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~~~g~-------~~----~~~~~~~~~---~~~ 210 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGGAEKCRFLVEELGF-------DG----AIDYKNEDL---AAG 210 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHHTTCC-------SE----EEETTTSCH---HHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHcCC-------CE----EEECCCHHH---HHH
Confidence 4688999999999999999888776664 56665532 22233122221 11 124443311 122
Q ss_pred HHHHh-cCccEEEEcCCC
Q 042694 186 ADVIA-KEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~-~~vdiViH~AA~ 202 (554)
...+. .++|+||++++.
T Consensus 211 ~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp HHHHCTTCEEEEEESSCH
T ss_pred HHHhcCCCceEEEECCCc
Confidence 33332 369999999873
No 410
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.75 E-value=0.097 Score=44.95 Aligned_cols=70 Identities=14% Similarity=0.228 Sum_probs=43.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|+|.|+ |.+|+.++..|.+.+ ++ |++.+.. ..+.+.+..+ +... .. ++.
T Consensus 20 ~~~~v~iiG~-G~iG~~~a~~l~~~g--~~-v~v~~r~~~~~~~~a~~~~----------~~~~-----~~------~~~ 74 (144)
T 3oj0_A 20 GGNKILLVGN-GMLASEIAPYFSYPQ--YK-VTVAGRNIDHVRAFAEKYE----------YEYV-----LI------NDI 74 (144)
T ss_dssp CCCEEEEECC-SHHHHHHGGGCCTTT--CE-EEEEESCHHHHHHHHHHHT----------CEEE-----EC------SCH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCC--CE-EEEEcCCHHHHHHHHHHhC----------CceE-----ee------cCH
Confidence 3889999996 999999999998754 43 6655542 1222222221 1111 11 234
Q ss_pred HHHhcCccEEEEcCCCC
Q 042694 187 DVIAKEVDVIVNSAANT 203 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v 203 (554)
....+++|+||.+.+..
T Consensus 75 ~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 75 DSLIKNNDVIITATSSK 91 (144)
T ss_dssp HHHHHTCSEEEECSCCS
T ss_pred HHHhcCCCEEEEeCCCC
Confidence 45567899999988764
No 411
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=91.73 E-value=0.28 Score=49.30 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=26.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.+|.|.||||++|..|++.|.+..+....+..+.+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as 37 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS 37 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc
Confidence 58999999999999999988774333336666643
No 412
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=90.98 E-value=0.032 Score=45.23 Aligned_cols=27 Identities=19% Similarity=-0.037 Sum_probs=26.4
Q ss_pred cccccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|.++|.|||.++.|...|+++||+.+
T Consensus 51 ~l~dLGlDSL~~veL~~~lE~~fgi~i 77 (103)
T 2lte_A 51 RMEDLAFDSLVVSELSLKLRKEFGVTG 77 (103)
Confidence 899999999999999999999999998
No 413
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.69 E-value=1 Score=44.36 Aligned_cols=114 Identities=16% Similarity=0.023 Sum_probs=68.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCch-hhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSY-QAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~-~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|| |.+|..++..|+..+. . .|++++... .+.......... ......++.. ..| +
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~d------------~ 68 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQL-G-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TND------------Y 68 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC------------G
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-c-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cCC------------H
Confidence 468999995 9999999999887654 3 777776421 111111111100 0001122221 222 1
Q ss_pred HHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 187 DVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++++|+||.+|+..+ ......++...|+.-.+.+++...+. ....++.+-|
T Consensus 69 -~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt 122 (321)
T 3p7m_A 69 -KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICIT 122 (321)
T ss_dssp -GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred -HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 23578999999998653 23345677888999999999998875 3444444434
No 414
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.63 E-value=0.5 Score=46.98 Aligned_cols=76 Identities=14% Similarity=0.163 Sum_probs=45.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+|+||+|-+|...+..+...|. +|+..+. ...+.+++. +. +. ++ |.. .++ .+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~~-ga-------~~--v~--~~~-~~~---~~~ 218 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRTAATEFVKSV-GA-------DI--VL--PLE-EGW---AKA 218 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHH-TC-------SE--EE--ESS-TTH---HHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHhc-CC-------cE--Ee--cCc-hhH---HHH
Confidence 3588999999999999999888877664 5555532 333444432 21 11 12 222 211 234
Q ss_pred HHHHhc--CccEEEEcCCC
Q 042694 186 ADVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~--~vdiViH~AA~ 202 (554)
...+.. ++|+||++++.
T Consensus 219 v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 219 VREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp HHHHTTTSCEEEEEESCC-
T ss_pred HHHHhCCCCceEEEECCch
Confidence 444443 69999999985
No 415
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.57 E-value=1.5 Score=42.92 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=70.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCch--hhh--ccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKSY--QAF--MLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~~--~~~--~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|.|+|+ |.+|..++..|+..+. ..|.+++... -++.+....+.. ... ...++.. ..|
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d----------- 72 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD----------- 72 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC-----------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC-----------
Confidence 468999997 9999999999988764 5778877542 222221110000 000 1123321 122
Q ss_pred HHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 185 LADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+ .-++++|+||-+|+..+- .+.-.++...|+.-.+.+.+...+. ....++.+=|
T Consensus 73 -~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvs 127 (315)
T 3tl2_A 73 -Y-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLT 127 (315)
T ss_dssp -G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred -H-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECC
Confidence 1 134799999999987543 3456688899999999999988875 3444444433
No 416
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.57 E-value=0.28 Score=49.04 Aligned_cols=77 Identities=10% Similarity=0.173 Sum_probs=46.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|+|+||+|-+|...++.+...|. +|+..+. ...+.+++ .+. +.+ .|..+.++ .+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~-lGa-------~~~----~~~~~~~~---~~~ 227 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA---EVYATAGSTGKCEACER-LGA-------KRG----INYRSEDF---AAV 227 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHH-HTC-------SEE----EETTTSCH---HHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHh-cCC-------CEE----EeCCchHH---HHH
Confidence 3578999999999999999988877664 5666553 22333332 211 111 23333311 122
Q ss_pred HHHHh-cCccEEEEcCCC
Q 042694 186 ADVIA-KEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~-~~vdiViH~AA~ 202 (554)
...+. .++|+||++++.
T Consensus 228 ~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 228 IKAETGQGVDIILDMIGA 245 (353)
T ss_dssp HHHHHSSCEEEEEESCCG
T ss_pred HHHHhCCCceEEEECCCH
Confidence 33322 379999999984
No 417
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.49 E-value=1.4 Score=43.56 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=68.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHH---cCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQT---YGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~---~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|| |.+|..++..|+..+ -+..|+++|.. .++++.. ..... . ....+.+..+| . +
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~-~~~el~L~Di~-~~~~~g~~~dl~~~~-~-~~~~~~i~~~~---~------~-- 72 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQG-IAQEIGIVDIF-KDKTKGDAIDLSNAL-P-FTSPKKIYSAE---Y------S-- 72 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSC-HHHHHHHHHHHHTTG-G-GSCCCEEEECC---G------G--
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCC-chHhHHHHHHHHHHH-H-hcCCeEEEECC---H------H--
Confidence 468999998 999999999988765 35688888753 1222221 11100 1 11333333322 1 2
Q ss_pred HHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 187 DVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
-++++|+||.+|+...- ...-..+...|+.-.+.+.+...+. ....++.+
T Consensus 73 --a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 123 (326)
T 2zqz_A 73 --DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLV 123 (326)
T ss_dssp --GGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred --HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 25799999999986432 2234467788999999999888775 34444444
No 418
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=91.43 E-value=0.1 Score=39.94 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=27.4
Q ss_pred cccccccC-CchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGG-GKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~G-G~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|++.| -|||.++.|...|.++||+.+
T Consensus 27 d~~l~~~g~lDSl~~velv~~lE~~fgi~i 56 (80)
T 1dv5_A 27 DLNLFETGLLDSMGTVQLLLELQSQFGVDA 56 (80)
T ss_dssp SCCSSTTSSCCSHHHHHHHHHHTTTSCCCC
T ss_pred CcchhhccCcChHHHHHHHHHHHHHhCCcC
Confidence 44999999 999999999999999999999
No 419
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=91.34 E-value=0.041 Score=54.19 Aligned_cols=22 Identities=5% Similarity=-0.073 Sum_probs=0.0
Q ss_pred CCchhHHHHHHHHHhhhhceee
Q 042694 41 GGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 41 GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
|||||+|+||.++|++++|+.+
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l 22 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQL 22 (316)
T ss_dssp ----------------------
T ss_pred CCchHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999887
No 420
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=91.32 E-value=0.68 Score=49.81 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=69.5
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++.....+|+|.|+ |-+|..+++.|.+.| |++|.++|... .+++++..
T Consensus 12 Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN---- 84 (640)
T 1y8q_B 12 AEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY---- 84 (640)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC----
T ss_pred HHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC----
Confidence 44456789999998 559999999999976 67888775321 11111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
..-+|.++..++....+ ...+.+++|+|+.+... + ..-..+-++|... -+++|+.
T Consensus 85 ---P~v~V~a~~~~i~~~~~------~~~~~~~~DlVvda~Dn--~------------~aR~~ln~~c~~~--~iPlI~~ 139 (640)
T 1y8q_B 85 ---PKANIVAYHDSIMNPDY------NVEFFRQFILVMNALDN--R------------AARNHVNRMCLAA--DVPLIES 139 (640)
T ss_dssp ---TTCEEEEEESCTTSTTS------CHHHHTTCSEEEECCSC--H------------HHHHHHHHHHHHH--TCCEEEE
T ss_pred ---CCCeEEEEecccchhhh------hHhhhcCCCEEEECCCC--H------------HHHHHHHHHHHHc--CCCEEEE
Confidence 12367788888865422 13456899999998432 1 1223355666663 3578887
Q ss_pred eeceeccc
Q 042694 240 STAYVNGQ 247 (554)
Q Consensus 240 ST~~v~~~ 247 (554)
++.+..|.
T Consensus 140 g~~G~~G~ 147 (640)
T 1y8q_B 140 GTAGYLGQ 147 (640)
T ss_dssp EEETTEEE
T ss_pred EEecccce
Confidence 77655443
No 421
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=91.25 E-value=1.1 Score=44.76 Aligned_cols=109 Identities=10% Similarity=0.143 Sum_probs=69.4
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+.| +|+.+++.|.+.| |+++.++|... .+++++..+
T Consensus 31 q~~L~~~~VlivG~GG-lG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp--- 104 (346)
T 1y8q_A 31 QKRLRASRVLLVGLKG-LGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP--- 104 (346)
T ss_dssp HHHHHTCEEEEECCSH-HHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT---
T ss_pred HHHHhCCeEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC---
Confidence 3446778999999755 9999999999876 67888774211 122222221
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-++.++..++... ...+.++.|+||.+... + ..-..+-++|.+. -++||+.
T Consensus 105 ----~v~v~~~~~~~~~~--------~~~~~~~~dvVv~~~d~--~------------~~r~~ln~~~~~~--~ip~i~~ 156 (346)
T 1y8q_A 105 ----MVDVKVDTEDIEKK--------PESFFTQFDAVCLTCCS--R------------DVIVKVDQICHKN--SIKFFTG 156 (346)
T ss_dssp ----TSEEEEECSCGGGC--------CHHHHTTCSEEEEESCC--H------------HHHHHHHHHHHHT--TCEEEEE
T ss_pred ----CeEEEEEecccCcc--------hHHHhcCCCEEEEcCCC--H------------HHHHHHHHHHHHc--CCCEEEE
Confidence 23567777766542 13456789999987432 1 1123456677763 3688888
Q ss_pred eeceeccc
Q 042694 240 STAYVNGQ 247 (554)
Q Consensus 240 ST~~v~~~ 247 (554)
++.+.+|.
T Consensus 157 ~~~G~~G~ 164 (346)
T 1y8q_A 157 DVFGYHGY 164 (346)
T ss_dssp EEEBTEEE
T ss_pred eecccEEE
Confidence 87776664
No 422
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.22 E-value=0.34 Score=47.80 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=46.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+|+||+|-+|...+..+...|. +|+..+. ...+.+++ .+. +. ++ |..+.++ .+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~-~Ga-------~~--~~--~~~~~~~---~~~ 200 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSSPEKAAHAKA-LGA-------WE--TI--DYSHEDV---AKR 200 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSHHHHHHHHH-HTC-------SE--EE--ETTTSCH---HHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH-cCC-------CE--EE--eCCCccH---HHH
Confidence 3588999999999999999888877764 5665543 22233332 211 11 12 3333311 133
Q ss_pred HHHHhc--CccEEEEcCCC
Q 042694 186 ADVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~--~vdiViH~AA~ 202 (554)
...+.. ++|+||++++.
T Consensus 201 ~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 201 VLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp HHHHTTTCCEEEEEESSCG
T ss_pred HHHHhCCCCceEEEECCCh
Confidence 444433 69999999885
No 423
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.20 E-value=0.7 Score=47.30 Aligned_cols=73 Identities=14% Similarity=0.245 Sum_probs=51.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+|.|+ |-+|+.+++.|.+.+..| .++-.+....+.+++ ..+.++.||.+++ +.+...
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~v-vvId~d~~~v~~~~~-----------~g~~vi~GDat~~------~~L~~a 64 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKM-VVLDHDPDHIETLRK-----------FGMKVFYGDATRM------DLLESA 64 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCE-EEEECCHHHHHHHHH-----------TTCCCEESCTTCH------HHHHHT
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCE-EEEECCHHHHHHHHh-----------CCCeEEEcCCCCH------HHHHhc
Confidence 457999996 999999999999877654 333233333333332 1345799999988 777666
Q ss_pred -hcCccEEEEcCC
Q 042694 190 -AKEVDVIVNSAA 201 (554)
Q Consensus 190 -~~~vdiViH~AA 201 (554)
++++|+||-+..
T Consensus 65 gi~~A~~viv~~~ 77 (413)
T 3l9w_A 65 GAAKAEVLINAID 77 (413)
T ss_dssp TTTTCSEEEECCS
T ss_pred CCCccCEEEECCC
Confidence 578999987754
No 424
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=91.16 E-value=0.12 Score=41.46 Aligned_cols=29 Identities=3% Similarity=-0.112 Sum_probs=27.2
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|.++|-|||.++.|...|+++||+.+
T Consensus 40 d~~L~dLGlDSL~~veL~~~LE~~fgi~i 68 (100)
T 1vku_A 40 ENTFKELGFDSIDVIDLVMFFEDEFALRI 68 (100)
T ss_dssp TSBTTTTTCCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHcCCchHHHHHHHHHHHHHHCCCC
Confidence 44889999999999999999999999998
No 425
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.13 E-value=1.5 Score=42.84 Aligned_cols=110 Identities=9% Similarity=0.030 Sum_probs=69.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHH---cCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQT---YGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~---~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|.|+|| |.+|..++..|+..+ -+..|.++|... ++++.. ..... . ....+.+..+| . +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~-~k~~g~a~dl~~~~-~-~~~~~~v~~~~---~------~--- 63 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLG-VAREVVLVDLDR-KLAQAHAEDILHAT-P-FAHPVWVWAGS---Y------G--- 63 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSH-HHHHHHHHHHHTTG-G-GSCCCEEEECC---G------G---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCh-hHHHHHHHHHHHhH-h-hcCCeEEEECC---H------H---
Confidence 47999998 999999999988765 366888887542 233221 11100 0 11233333322 1 2
Q ss_pred HHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 188 VIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
-++++|+||.+|+...- ...-..+...|+.-.+.+.+...+. ....++.+
T Consensus 64 -a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 114 (310)
T 2xxj_A 64 -DLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLV 114 (310)
T ss_dssp -GGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred -HhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEE
Confidence 25799999999986432 3334567888999999999888875 44554444
No 426
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.08 E-value=1.3 Score=43.44 Aligned_cols=111 Identities=12% Similarity=0.057 Sum_probs=66.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH---HcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ---TYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~---~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|| |.+|..++..|+..+. +..|+++|.. .+++.. ...... . ....+.+..++ . +
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~-~~~~~g~~~dl~~~~-~-~~~~~~v~~~~---~------~-- 68 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVV-KDRTKGDALDLEDAQ-A-FTAPKKIYSGE---Y------S-- 68 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSS-HHHHHHHHHHHHGGG-G-GSCCCEEEECC---G------G--
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCC-chHHHHHHHHHHHHH-H-hcCCeEEEECC---H------H--
Confidence 368999998 9999999999988653 5688888753 122222 111100 1 11333333322 1 1
Q ss_pred HHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 187 DVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
-++++|+||.+|+...- ...-.++...|+.-.+.+.+...+. ....++.+
T Consensus 69 --a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 69 --DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp --GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred --HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 25799999999986432 2233456778999999999888875 45555444
No 427
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.00 E-value=1.9 Score=42.28 Aligned_cols=116 Identities=12% Similarity=0.110 Sum_probs=72.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCC--chhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGK--SYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~--~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|.|+|| |.+|..++..|+..+. +..|.++|... +++...... .........+.+..+| . +
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~-~~~~g~~~dl~~~~~~~~~~~~v~~~~---~------~--- 70 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT-EKVRGDVMDLKHATPYSPTTVRVKAGE---Y------S--- 70 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH-HHHHHHHHHHHHHGGGSSSCCEEEECC---G------G---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh-hHhhhhhhhHHhhhhhcCCCeEEEeCC---H------H---
Confidence 468999998 9999999999987653 45788887431 222211100 0001111233322221 1 1
Q ss_pred HHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 188 VIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
.++++|+||-+|+...- ......+...|+.-.+.+.+...+. ....++.+.|.
T Consensus 71 -a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 71 -DCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp -GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred -HhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 25799999999987432 3344567788999999999888875 55666666553
No 428
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=91.00 E-value=0.15 Score=51.18 Aligned_cols=33 Identities=12% Similarity=0.359 Sum_probs=26.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
..+|.|.||||++|+.+++.|++. +++ .+..+.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~ 48 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMT 48 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEB
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 368999999999999999999874 666 455543
No 429
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.99 E-value=0.24 Score=51.63 Aligned_cols=71 Identities=24% Similarity=0.416 Sum_probs=51.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+.|+|+|.|+ |-+|++|++.|.+.+++ |.+++ ....+++.+.. .+..+.||-+++ +.+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~---v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~------~~L 61 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENND---ITIVDKDGDRLRELQDKY----------DLRVVNGHASHP------DVL 61 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEE---EEEEESCHHHHHHHHHHS----------SCEEEESCTTCH------HHH
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHhc----------CcEEEEEcCCCH------HHH
Confidence 3578999997 89999999999887765 44554 34444444433 356799999988 766
Q ss_pred HHH-hcCccEEEEc
Q 042694 187 DVI-AKEVDVIVNS 199 (554)
Q Consensus 187 ~~l-~~~vdiViH~ 199 (554)
++. .+++|+++=+
T Consensus 62 ~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 62 HEAGAQDADMLVAV 75 (461)
T ss_dssp HHHTTTTCSEEEEC
T ss_pred HhcCCCcCCEEEEE
Confidence 665 4689998844
No 430
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.94 E-value=1.6 Score=42.81 Aligned_cols=115 Identities=13% Similarity=-0.029 Sum_probs=67.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|.|+|| |.+|..++..|+..+. +..++++|... ++++....+.. .......+.+...|. . .
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~-~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~----------~ 65 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKD-GMPQGKALDMRESSPIHGFDTRVTGTND--Y----------G 65 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSST-THHHHHHHHHHHHHHHHTCCCEEEEESS--S----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCch-HHHHHHHHHHhccccccCCCcEEEECCC--H----------H
Confidence 57999997 9999999999988764 56788887432 11111100000 000111222221121 1 1
Q ss_pred HhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 189 IAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 189 l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
-++++|+||-+|+..+ ..+.-.++...|+.-.+.+.+...+. ....++.+-|
T Consensus 66 a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt 118 (314)
T 3nep_X 66 PTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVA 118 (314)
T ss_dssp GGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECC
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecC
Confidence 3478999999998753 23345577899999999999998875 4555554444
No 431
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=90.75 E-value=0.083 Score=51.41 Aligned_cols=26 Identities=8% Similarity=-0.055 Sum_probs=24.9
Q ss_pred cccccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|+++|+||+.+|+|+..+++. |+.+
T Consensus 239 nL~~lGlDSi~~m~l~~~~~~~-g~~~ 264 (287)
T 2fq1_A 239 NLIDYGLDSVRMMALAARWRKV-HGDI 264 (287)
T ss_dssp CSGGGTCCTTHHHHHHHHHTTT-CTTC
T ss_pred CHHHhCccHHHHHHHHHHHHHc-CCCC
Confidence 9999999999999999999987 9887
No 432
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=90.64 E-value=0.15 Score=41.04 Aligned_cols=28 Identities=7% Similarity=-0.115 Sum_probs=25.9
Q ss_pred ccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+| -++|-|||.++.|...|+++||+.+
T Consensus 27 ~~l~~dLGlDSL~~veLi~~lE~~fgi~i 55 (101)
T 2kw2_A 27 SHAIDDLGIDSLDFLDIAFAIDKAFGIKL 55 (101)
T ss_dssp CBCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred cchHHhcCCCHHHHHHHHHHHHHHHCCcc
Confidence 367 4999999999999999999999998
No 433
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.60 E-value=1 Score=44.47 Aligned_cols=117 Identities=9% Similarity=0.042 Sum_probs=71.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
...++|.|+|| |.+|..++..|+..+ -+..++++|... ++++....+.. .......-....+|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~-~~~~g~a~DL~~~~~~~~~~~i~~~~d------------ 81 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKD-LADELALVDVIE-DKLKGEMMDLQHGSLFLKTPKIVSSKD------------ 81 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCH-HHHHHHHHHHHHTGGGCSCCEEEECSS------------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEeCCh-HHHHHHHHhhhhhhhccCCCeEEEcCC------------
Confidence 45679999997 999999999998865 345788887431 22221110000 00011111112233
Q ss_pred HHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 186 ADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++ -++++|+||-+|+..+- .+.-.++.+.|+.-.+++.+...+. ....++.+-|
T Consensus 82 ~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt 136 (331)
T 4aj2_A 82 YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS 136 (331)
T ss_dssp GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 22 25799999999987542 3345578899999999999888875 4555554444
No 434
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.60 E-value=1 Score=44.41 Aligned_cols=115 Identities=13% Similarity=0.042 Sum_probs=66.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCch-hhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSY-QAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~-~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++|.|+|| |.+|..++..|+..+. . .|++++... .+.......... ......++.. ..|.
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~-~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d~----------- 70 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKEL-G-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-ANDY----------- 70 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESSG-----------
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCCH-----------
Confidence 3568999998 9999999999888665 2 677776421 111111110000 0001123221 2332
Q ss_pred HHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 186 ADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++++|+||-+|+..+ ....-.++...|+.-.+.+++...+. ....++.+-|
T Consensus 71 --~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvt 124 (324)
T 3gvi_A 71 --AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICIT 124 (324)
T ss_dssp --GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred --HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecC
Confidence 23579999999998643 23334467788999999999988875 3444444433
No 435
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.44 E-value=0.37 Score=47.66 Aligned_cols=77 Identities=17% Similarity=0.189 Sum_probs=45.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+|+||+|-+|...+..+...|. +|+..+.. ..+.+++ .+. +. ++ |..++++ .+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~-~ga-------~~--~~--~~~~~~~---~~~ 208 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVASTDEKLKIAKE-YGA-------EY--LI--NASKEDI---LRQ 208 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSHHHHHHHHH-TTC-------SE--EE--ETTTSCH---HHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH-cCC-------cE--EE--eCCCchH---HHH
Confidence 4678999999999999999887776654 56665542 2222222 211 11 12 3333311 133
Q ss_pred HHHHh--cCccEEEEcCCC
Q 042694 186 ADVIA--KEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~--~~vdiViH~AA~ 202 (554)
...+. .++|+||++++.
T Consensus 209 ~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 209 VLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp HHHHTTTSCEEEEEECCGG
T ss_pred HHHHhCCCCceEEEECCCh
Confidence 44443 269999999885
No 436
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=90.42 E-value=0.27 Score=49.06 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=28.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.+.+|.|.||||++|..|++.|.+ .|.+ +|..+.+
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~-hP~~-el~~l~S 46 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKN-HPEA-KITYLSS 46 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHH-CTTE-EEEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHc-CCCc-EEEEEeC
Confidence 457899999999999999999987 4776 6776643
No 437
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.37 E-value=1.9 Score=45.80 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=55.2
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchh
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQ 160 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~ 160 (554)
+-.++.+|+|.|+.| +|+.+++.|.+.| |++|.++|... .+++++..+
T Consensus 323 ~kL~~~kVLIVGaGG-LGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP---- 395 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGT-LGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---- 395 (598)
T ss_dssp HHHHTCEEEEECCSH-HHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCT----
T ss_pred HHHhCCeEEEECCCH-HHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCC----
Confidence 345678999999855 9999999999865 77898875321 122222221
Q ss_pred hhccCcEEEEEccCCCCCCCC--------CHHHHHHHhcCccEEEEcCCC
Q 042694 161 AFMLSKLVPAVGNVCENNLGL--------EEDLADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 161 ~~~~~kv~~v~GDl~~~~lGL--------s~~~~~~l~~~vdiViH~AA~ 202 (554)
.-+++.+..++..+.-.+ +.+....+.++.|+||.+...
T Consensus 396 ---~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn 442 (598)
T 3vh1_A 396 ---LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 442 (598)
T ss_dssp ---TCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSB
T ss_pred ---CcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCC
Confidence 235666666653332222 234556777899999997543
No 438
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=90.33 E-value=0.57 Score=47.03 Aligned_cols=34 Identities=12% Similarity=0.194 Sum_probs=25.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCC-ccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPD-VGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~-V~~i~~~~ 144 (554)
++|.|.||||++|..|++.||...|- ...+..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 47999999999999999966664441 23666554
No 439
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.32 E-value=0.43 Score=47.90 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=45.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+|+||+|-+|..+++.+...|. +|+..+.. ..+.+++ .+. +. ++ |..+.++ .+.
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~~~~~~~~~~-~Ga-------~~--~~--~~~~~~~---~~~ 223 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSSDEKSAFLKS-LGC-------DR--PI--NYKTEPV---GTV 223 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESSHHHHHHHHH-TTC-------SE--EE--ETTTSCH---HHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECCHHHHHHHHH-cCC-------cE--EE--ecCChhH---HHH
Confidence 4578999999999999999888776654 56666532 2233332 211 11 12 3333311 122
Q ss_pred HHHHh-cCccEEEEcCCC
Q 042694 186 ADVIA-KEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~-~~vdiViH~AA~ 202 (554)
...+. .++|+||++++.
T Consensus 224 ~~~~~~~g~D~vid~~g~ 241 (362)
T 2c0c_A 224 LKQEYPEGVDVVYESVGG 241 (362)
T ss_dssp HHHHCTTCEEEEEECSCT
T ss_pred HHHhcCCCCCEEEECCCH
Confidence 33332 369999999883
No 440
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=90.17 E-value=0.45 Score=47.60 Aligned_cols=32 Identities=13% Similarity=0.379 Sum_probs=26.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII 143 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~ 143 (554)
+.+|.|.||||++|+.+++.|++ .+++ .+..+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~-~p~~-elvai 35 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAK-HPYL-ELVKV 35 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT-CSSE-EEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHh-CCCc-EEEEE
Confidence 46899999999999999998876 4676 45544
No 441
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=90.11 E-value=0.051 Score=42.93 Aligned_cols=29 Identities=10% Similarity=-0.101 Sum_probs=13.0
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|.++|.|||.++.|...|+++||+.+
T Consensus 35 d~~l~dlg~DSl~~vel~~~lE~~fgi~i 63 (92)
T 1fh1_A 35 DTELTSLGIDSLGLADVLWDLEQLYGIKI 63 (92)
T ss_dssp -----------CTTTTHHHHHHHC-----
T ss_pred CCCHhhcCCChHHHHHHHHHHHHHhCCcc
Confidence 44899999999999999999999999998
No 442
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=90.07 E-value=0.51 Score=46.93 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=26.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~ 145 (554)
+.+|.|.||||++|..|++.|.+.. |.+ .+..+.+
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~-el~~~~s 36 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPAS-AVRFFAS 36 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCce-EEEEEEC
Confidence 4689999999999999999777643 444 6666643
No 443
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=90.04 E-value=0.18 Score=40.54 Aligned_cols=29 Identities=7% Similarity=-0.027 Sum_probs=27.0
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| .++|-|||.++.|...|+++||+.+
T Consensus 49 d~~l~~dLGlDSL~~veLi~~lE~~fgi~i 78 (101)
T 4dxe_H 49 DASFKDDLGADSLDIAELVMELEDEFGTEI 78 (101)
T ss_dssp TCBTTTTSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCcchhhcCCCcHHHHHHHHHHHHHHCCCC
Confidence 4488 8999999999999999999999998
No 444
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.02 E-value=0.59 Score=46.52 Aligned_cols=77 Identities=19% Similarity=0.187 Sum_probs=47.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
-.+++|+||||+|-+|..+++.+... +. +|+..+. ...+.+++ .+. +. . .|..+.+. .+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga---~Vi~~~~~~~~~~~~~~-~g~-------~~--~--~~~~~~~~---~~ 230 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA---TIIGVDVREEAVEAAKR-AGA-------DY--V--INASMQDP---LA 230 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCC---EEEEEESSHHHHHHHHH-HTC-------SE--E--EETTTSCH---HH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCC---eEEEEcCCHHHHHHHHH-hCC-------CE--E--ecCCCccH---HH
Confidence 36789999999989999999888877 64 5666543 22233322 211 11 1 24433310 13
Q ss_pred HHHHHh--cCccEEEEcCCC
Q 042694 185 LADVIA--KEVDVIVNSAAN 202 (554)
Q Consensus 185 ~~~~l~--~~vdiViH~AA~ 202 (554)
....+. .++|+||++++.
T Consensus 231 ~~~~~~~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 231 EIRRITESKGVDAVIDLNNS 250 (347)
T ss_dssp HHHHHTTTSCEEEEEESCCC
T ss_pred HHHHHhcCCCceEEEECCCC
Confidence 344554 379999999985
No 445
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.86 E-value=0.55 Score=46.59 Aligned_cols=77 Identities=8% Similarity=0.095 Sum_probs=46.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.|++|+|+||+|-+|...+..+...|. +|+..+ ....+.+++. +. +. ++ |..+.++ .+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~l-ga-------~~--~~--~~~~~~~---~~~ 204 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNKHTEELLRL-GA-------AY--VI--DTSTAPL---YET 204 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSSTTHHHHHHH-TC-------SE--EE--ETTTSCH---HHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHhC-CC-------cE--EE--eCCcccH---HHH
Confidence 4688999999999999999887776664 566554 2334444432 21 11 12 3333311 133
Q ss_pred HHHHhc--CccEEEEcCCC
Q 042694 186 ADVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~--~vdiViH~AA~ 202 (554)
...+.. ++|+||++++.
T Consensus 205 ~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 205 VMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp HHHHTTTSCEEEEEESSCH
T ss_pred HHHHhCCCCCcEEEECCCC
Confidence 344433 79999999874
No 446
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=89.47 E-value=0.21 Score=38.80 Aligned_cols=29 Identities=10% Similarity=-0.087 Sum_probs=26.5
Q ss_pred cccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+| -++|.|||.++.|...|+++||+.+
T Consensus 34 d~~l~~dlglDSl~~vel~~~lE~~fgi~i 63 (88)
T 2l4b_A 34 TTNLAKDFNLDSLDFVDLIMSLEERFSLEI 63 (88)
T ss_dssp TSCTTTTTTCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCchhhccCCcHHHHHHHHHHHHHHHCCCc
Confidence 3478 5899999999999999999999998
No 447
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.25 E-value=0.58 Score=44.88 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=28.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE 146 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~ 146 (554)
.++++|+|+|+ |-+|+.++..|++.|. +|++.++.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~---~V~v~~R~ 151 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRT 151 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCC---EEEEEECC
Confidence 46899999998 6699999999999773 67776543
No 448
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.19 E-value=2.5 Score=41.23 Aligned_cols=114 Identities=9% Similarity=0.022 Sum_probs=64.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|.|.|| |.+|..+...|...+. ...|.+++.. ..+.+.......... ....++.. ..| ++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------------~~ 65 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND------------YA 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCC------------HH
Confidence 47999998 9999999999887522 2367777542 222222111110000 01112211 122 12
Q ss_pred HHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 188 VIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
. ++++|+||-+++...- ......+...|+.-.+.+.+...+. .....+.+-|
T Consensus 66 ~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~t 118 (310)
T 1guz_A 66 D-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS 118 (310)
T ss_dssp G-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred H-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEc
Confidence 3 4789999999976432 2334567788888888888888775 3444433333
No 449
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.16 E-value=0.76 Score=45.52 Aligned_cols=116 Identities=10% Similarity=0.030 Sum_probs=66.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|.|| |.+|..++..|...+. + .|.+++. +..+............ ....++.. . .++
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------------~d~ 72 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------------YSY 72 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------------CSH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------------CCH
Confidence 468999998 9999999999988775 2 3666653 2222211111000000 01122221 1 234
Q ss_pred HHHhcCccEEEEcCCCCCc-hh-----hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 187 DVIAKEVDVIVNSAANTTF-DE-----RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~-----~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
++.++++|+||-+++...- .. .-..+...|+.-.+++.+...+. ....++.+.|.
T Consensus 73 ~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 133 (331)
T 1pzg_A 73 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTN 133 (331)
T ss_dssp HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEcC
Confidence 4346899999999865422 11 22344667777788888887775 34556655554
No 450
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.06 E-value=1.4 Score=43.58 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=29.4
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
-.++.+|+|.|+ |-+|+.+++.|.+.| |++|.++|.
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~ 66 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDN 66 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecC
Confidence 356789999998 559999999999864 678888753
No 451
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=88.99 E-value=1.3 Score=47.23 Aligned_cols=85 Identities=19% Similarity=0.165 Sum_probs=54.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchhhh
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQAF 162 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~~~ 162 (554)
.++.+|+|.|+ |-+|+.+++.|.+.| |++|.++|... .+++++..+
T Consensus 324 L~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP------ 394 (615)
T 4gsl_A 324 IKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP------ 394 (615)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT------
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC------
Confidence 56789999998 559999999999864 77898876421 122222221
Q ss_pred ccCcEEEEEccCCCCCCC--------CCHHHHHHHhcCccEEEEcCCC
Q 042694 163 MLSKLVPAVGNVCENNLG--------LEEDLADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 163 ~~~kv~~v~GDl~~~~lG--------Ls~~~~~~l~~~vdiViH~AA~ 202 (554)
.-+++.+..++..+.-- ++.+....+.+++|+|+.|...
T Consensus 395 -~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 395 -LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp -TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred -CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 23556666555322111 1234556677899999998654
No 452
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.97 E-value=0.85 Score=44.03 Aligned_cols=78 Identities=14% Similarity=0.157 Sum_probs=47.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+|+|| |-+|+.++..|.+.+ +++|++.++.. .+.+.+...... ..-++..+ ++ ++
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~~~---~~~~i~~~--~~---------~~ 187 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHG--VQKLQVADLDTSRAQALADVINNAV---GREAVVGV--DA---------RG 187 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTT--CSEEEEECSSHHHHHHHHHHHHHHH---TSCCEEEE--CS---------TT
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhhc---CCceEEEc--CH---------HH
Confidence 56899999998 779999999999865 45677776531 222322221100 01123222 21 33
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
+....+++|+||++...
T Consensus 188 l~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 188 IEDVIAAADGVVNATPM 204 (283)
T ss_dssp HHHHHHHSSEEEECSST
T ss_pred HHHHHhcCCEEEECCCC
Confidence 44556689999998754
No 453
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.57 E-value=0.49 Score=46.02 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=27.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
-.|++|+|+||+|-+|...+..+...|. +|+..+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~ 157 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAA 157 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEe
Confidence 3688999999999999999887776553 566554
No 454
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.37 E-value=1.5 Score=42.73 Aligned_cols=112 Identities=10% Similarity=0.066 Sum_probs=61.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH---HcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ---TYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~---~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|.|+|| |.+|..++..|...+. +..|++++... +++.. ......+ ....+.+..+| ++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~-~~~~~~~~~l~~~~~--~~~~~~i~~~~------------~~ 63 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE-DRAQAEAEDIAHAAP--VSHGTRVWHGG------------HS 63 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH-HHHHHHHHHHTTSCC--TTSCCEEEEEC------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH-HHHHHHHHhhhhhhh--hcCCeEEEECC------------HH
Confidence 47999998 9999999999988764 45788877532 22221 1111000 01111111122 11
Q ss_pred HHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 188 VIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
.++++|+||-+++... ....-.++...|+.-.+.+++...+. ....++.+.|
T Consensus 64 -a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~t 116 (304)
T 2v6b_A 64 -ELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTS 116 (304)
T ss_dssp -GGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECS
T ss_pred -HhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 2578999999986532 22333456678888888888888775 3444444433
No 455
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.29 E-value=2.9 Score=41.16 Aligned_cols=115 Identities=10% Similarity=-0.004 Sum_probs=70.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhh-ccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAF-MLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~-~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..++|.|+|| |.+|..++..|+..+. +..+.++|... ++++....+.. ... ...++ ...+|..+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~-~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~~--------- 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVME-DKLKGEMMDLEHGSLFLHTAKI-VSGKDYSV--------- 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCH-HHHHHHHHHHHHHGGGSCCSEE-EEESSSCS---------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCH-HHHHHHHHHhhhhhhcccCCeE-EEcCCHHH---------
Confidence 4578999998 9999999999988763 45788877421 11111100000 000 12233 22345432
Q ss_pred HHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 186 ADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+||-+|+..+- .+.-.++...|+.-.+.+.+...+. ....++.+=|
T Consensus 87 ----~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 87 ----SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp ----CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred ----hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 4799999999987542 2334467788888888998888875 4555544444
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.89 E-value=2.5 Score=41.36 Aligned_cols=115 Identities=17% Similarity=0.102 Sum_probs=66.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchh--hhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQ--AFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~--~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|.|+|| |.+|..++..|+..+. +..|+++|... ++++........ ......+.+..+| +
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~-~~~~~~~~dl~~~~~~~~~~~~i~~~~------------~- 69 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANE-SKAIGDAMDFNHGKVFAPKPVDIWHGD------------Y- 69 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH-HHHHHHHHHHHHHTTSSSSCCEEEECC------------G-
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCc-chHHHHHhhHHHHhhhcCCCeEEEcCc------------H-
Confidence 468999998 9999999998887653 56888887542 122211100000 0011123323222 1
Q ss_pred HHhcCccEEEEcCCCCCch-hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 188 VIAKEVDVIVNSAANTTFD-ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++++|+||-+++...-. ..-.++...|..-.+.+.+...+. ....++.+-|
T Consensus 70 ~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~t 123 (316)
T 1ldn_A 70 DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT 123 (316)
T ss_dssp GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEeC
Confidence 1257899999998764321 112344567777778888877764 3444444433
No 457
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.71 E-value=1.3 Score=44.50 Aligned_cols=74 Identities=12% Similarity=0.224 Sum_probs=44.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
-.|++|+|+||+|-+|...+..+...|. +|+...++ ..+.++ ..+. +. ++ |..++ +..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~~~~~~~~~-~lGa-------~~--v~--~~~~~------~~~ 240 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCSQDASELVR-KLGA-------DD--VI--DYKSG------SVE 240 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECGGGHHHHH-HTTC-------SE--EE--ETTSS------CHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeChHHHHHHH-HcCC-------CE--EE--ECCch------HHH
Confidence 4578999999999999998877766553 55554432 233332 2221 11 12 33333 222
Q ss_pred HHHh--cCccEEEEcCCC
Q 042694 187 DVIA--KEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~--~~vdiViH~AA~ 202 (554)
+.+. .++|+||++++.
T Consensus 241 ~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 241 EQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp HHHHTSCCBSEEEESSCT
T ss_pred HHHhhcCCCCEEEECCCC
Confidence 2333 479999999884
No 458
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=87.52 E-value=0.34 Score=39.24 Aligned_cols=29 Identities=17% Similarity=0.003 Sum_probs=26.7
Q ss_pred ccccc-ccCC-chhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGG-KTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG-~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+ ++|. |||.++.|...|.++||+.+
T Consensus 49 d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I 79 (105)
T 2lki_A 49 SSVLLGNIPELDSMAVVNVITALEEYFDFSV 79 (105)
T ss_dssp TSBCBTTBTTCCHHHHHHHHHHHHHHHTSCC
T ss_pred CCchhhhcCcccHHHHHHHHHHHHHHhCCCc
Confidence 34889 5999 99999999999999999998
No 459
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=87.09 E-value=2.9 Score=42.84 Aligned_cols=76 Identities=20% Similarity=0.325 Sum_probs=51.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchhhh
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQAF 162 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~~~ 162 (554)
.+..+|+|.|+.| +|+.+++.|.+.| |++|.++|... .+++++..+
T Consensus 38 L~~~~VlvvG~GG-lGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp------ 108 (434)
T 1tt5_B 38 LDTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------ 108 (434)
T ss_dssp HHTCCEEEECSST-HHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST------
T ss_pred hcCCEEEEECcCH-HHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC------
Confidence 4678999999855 9999999999875 56787764211 122222221
Q ss_pred ccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCC
Q 042694 163 MLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAA 201 (554)
Q Consensus 163 ~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA 201 (554)
.-+++.+..++... . ..+.++.|+|+.+..
T Consensus 109 -~v~v~~~~~~i~~~------~--~~~~~~~DlVi~~~D 138 (434)
T 1tt5_B 109 -NCNVVPHFNKIQDF------N--DTFYRQFHIIVCGLD 138 (434)
T ss_dssp -TCCCEEEESCGGGB------C--HHHHTTCSEEEECCS
T ss_pred -CCEEEEEecccchh------h--HHHhcCCCEEEECCC
Confidence 23577777777653 1 356689999999854
No 460
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=86.76 E-value=1.5 Score=43.62 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=45.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||+|-+|...+..+...|. +|+..+ ....+.+++ .+. +. ++ |..+.++ .+...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~~~~~~~~~-~Ga-------~~--~~--~~~~~~~---~~~v~ 226 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRDEQIALLKD-IGA-------AH--VL--NEKAPDF---EATLR 226 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCGGGHHHHHH-HTC-------SE--EE--ETTSTTH---HHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH-cCC-------CE--EE--ECCcHHH---HHHHH
Confidence 37999999999999999887777664 566554 233444443 221 11 12 3333311 13333
Q ss_pred HHh--cCccEEEEcCCC
Q 042694 188 VIA--KEVDVIVNSAAN 202 (554)
Q Consensus 188 ~l~--~~vdiViH~AA~ 202 (554)
.+. .++|+||++++.
T Consensus 227 ~~~~~~g~D~vid~~g~ 243 (349)
T 3pi7_A 227 EVMKAEQPRIFLDAVTG 243 (349)
T ss_dssp HHHHHHCCCEEEESSCH
T ss_pred HHhcCCCCcEEEECCCC
Confidence 443 379999999874
No 461
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.70 E-value=1.6 Score=42.65 Aligned_cols=114 Identities=10% Similarity=0.078 Sum_probs=62.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|.| +|.+|..++..|.+.+. ...|++++.. ..+.+....... .......+.....|. .
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~d~-------------~ 65 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAKVKADQIDFQDA-MANLEAHGNIVINDW-------------A 65 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHHH-GGGSSSCCEEEESCG-------------G
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHHHHHHHHHHHhh-hhhcCCCeEEEeCCH-------------H
Confidence 5899999 69999999999998873 3467777643 222232211100 000111222222332 1
Q ss_pred HhcCccEEEEcCCCCC-----chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 189 IAKEVDVIVNSAANTT-----FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 189 l~~~vdiViH~AA~v~-----~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
.++++|+||-++.... ....-..+...|+.-.+.+++...+. .....+.+.|
T Consensus 66 ~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~~t 122 (309)
T 1hyh_A 66 ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVIS 122 (309)
T ss_dssp GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred HhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEc
Confidence 2478999999887532 11112234556777777787777664 2344444333
No 462
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=86.66 E-value=0.13 Score=64.65 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=0.0
Q ss_pred ceeeeeccc-------cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 25 DLCLLRRKR-------SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 25 ~~~~~~~~~-------~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.|+.++..+ +.+||++|||||+|++|.++|++.+++.+
T Consensus 2131 ~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l 2175 (2512)
T 2vz8_A 2131 AVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVL 2175 (2512)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcc
Confidence 688666532 23899999999999999999999999887
No 463
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.55 E-value=0.93 Score=44.12 Aligned_cols=75 Identities=24% Similarity=0.220 Sum_probs=47.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+|+|+ |-+|+.++..|++.+. ++|++.++.. .+.+.+..+.. ...+ + +.++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~~ka~~la~~~~~~-----~~~~--~-----------~~~~ 197 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTVEKAERLVREGDER-----RSAY--F-----------SLAE 197 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSHHHHHHHHHHSCSS-----SCCE--E-----------CHHH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHhhhc-----cCce--e-----------eHHH
Confidence 46899999997 6699999999998653 4677776532 22333322110 0011 1 1134
Q ss_pred HHHHhcCccEEEEcCCCC
Q 042694 186 ADVIAKEVDVIVNSAANT 203 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v 203 (554)
.....+++|+||++.+..
T Consensus 198 ~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 198 AETRLAEYDIIINTTSVG 215 (297)
T ss_dssp HHHTGGGCSEEEECSCTT
T ss_pred HHhhhccCCEEEECCCCC
Confidence 555667899999998764
No 464
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.48 E-value=0.82 Score=46.18 Aligned_cols=74 Identities=9% Similarity=0.157 Sum_probs=47.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+|+|+ |-+|..+++.+...|. +|+..+... .+.+++..+. .+.. +... .++
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~~~~l~~~~~~~g~--------~~~~---~~~~------~~~ 224 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDINIDKLRQLDAEFCG--------RIHT---RYSS------AYE 224 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTT--------SSEE---EECC------HHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHhcCC--------eeEe---ccCC------HHH
Confidence 56899999998 9999999999987664 566666432 2223322221 1111 1122 256
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
+.++..++|+||.+++.
T Consensus 225 l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 225 LEGAVKRADLVIGAVLV 241 (377)
T ss_dssp HHHHHHHCSEEEECCCC
T ss_pred HHHHHcCCCEEEECCCc
Confidence 66777889999998764
No 465
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=86.29 E-value=1.4 Score=41.59 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=21.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
++|.|.|+||-+|+.+++.+.+. ++.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~ 26 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDL 26 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCC
Confidence 37999999999999999998753 444
No 466
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.02 E-value=1 Score=45.19 Aligned_cols=74 Identities=12% Similarity=0.238 Sum_probs=46.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+|+|+ |-+|+.++..+...|. +|+..+.. ..+.+++... ..+..+. . +.++
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~~r~~~~~~~~~--------~~~~~~~---~------~~~~ 223 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINVERLSYLETLFG--------SRVELLY---S------NSAE 223 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHG--------GGSEEEE---C------CHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHhhC--------ceeEeee---C------CHHH
Confidence 45689999999 9999999999988764 56666543 2222332211 1221111 1 1245
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
+.....++|+||++++.
T Consensus 224 ~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 224 IETAVAEADLLIGAVLV 240 (361)
T ss_dssp HHHHHHTCSEEEECCCC
T ss_pred HHHHHcCCCEEEECCCc
Confidence 55566799999999875
No 467
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.91 E-value=3.2 Score=40.61 Aligned_cols=111 Identities=13% Similarity=0.016 Sum_probs=64.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|.|| |.+|..++..|+..+. +..|++++... .+.+......... ......+...| . +
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~~~~~~~~l~~~~~--~~~~~~i~~~d---~------~---- 63 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRAEGDALDLIHGTP--FTRRANIYAGD---Y------A---- 63 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHHHGG--GSCCCEEEECC---G------G----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHHHHHHHHHHhhhh--hcCCcEEEeCC---H------H----
Confidence 47999998 9999999999998876 44677776431 2222211110000 01111111112 1 1
Q ss_pred HhcCccEEEEcCCCCCch-hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 189 IAKEVDVIVNSAANTTFD-ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.++++|+||-+++..... ..-..+...|+.-.+.+++...+. .....+.+
T Consensus 64 ~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 64 DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (319)
T ss_dssp GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence 247899999998864421 123356777888888888887764 33444433
No 468
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=85.90 E-value=1.1 Score=43.83 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=46.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++|+|| |-.|+.++..|.+.+ +++|++.++. ..++.++.... ........+..+ ++.+. +.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G--~~~v~v~nRt~~~~~~a~~la~~-~~~~~~~~v~~~--~~~~l------~~ 213 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEG--IKEIKLFNRKDDFFEKAVAFAKR-VNENTDCVVTVT--DLADQ------HA 213 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTHHHHHHHHHHH-HHHHSSCEEEEE--ETTCH------HH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEECCCchHHHHHHHHHH-hhhccCcceEEe--chHhh------hh
Confidence 46899999997 778999999999865 4567766543 12333221110 001011122222 33221 22
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
......++|+||++...
T Consensus 214 ~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 214 FTEALASADILTNGTKV 230 (312)
T ss_dssp HHHHHHHCSEEEECSST
T ss_pred hHhhccCceEEEECCcC
Confidence 34445679999998654
No 469
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.71 E-value=1.3 Score=43.89 Aligned_cols=75 Identities=16% Similarity=0.306 Sum_probs=44.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
-.|++|||+||+|-+|...+..+...|. +|+...++ ..+.+++ .+. ..+ | .+.++ .+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga---~Vi~~~~~~~~~~~~~-lGa----------~~i--~-~~~~~---~~~~ 208 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA---RVFATARGSDLEYVRD-LGA----------TPI--D-ASREP---EDYA 208 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECHHHHHHHHH-HTS----------EEE--E-TTSCH---HHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCHHHHHHHHH-cCC----------CEe--c-cCCCH---HHHH
Confidence 3578999999999999999888776664 45555332 2222322 211 112 3 22211 2333
Q ss_pred HHHhc--CccEEEEcCCC
Q 042694 187 DVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~ 202 (554)
..+.. ++|+||++++.
T Consensus 209 ~~~~~~~g~D~vid~~g~ 226 (343)
T 3gaz_A 209 AEHTAGQGFDLVYDTLGG 226 (343)
T ss_dssp HHHHTTSCEEEEEESSCT
T ss_pred HHHhcCCCceEEEECCCc
Confidence 44433 79999999884
No 470
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=85.65 E-value=0.55 Score=46.64 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=27.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~ 144 (554)
+++|.|.||||++|+.+++.|+++. +.+ .++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEE
Confidence 4689999999999999999998754 556 555554
No 471
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=85.61 E-value=1.8 Score=43.19 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=44.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
|++|+|+|| |-+|..++..+...|. +|+..+.. ..+.+++ .+ ...+ | .+ .+.+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~~~~~~~~~~~~-~g----------a~~v--~-~~---~~~~~ 239 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRREPTEVEQTVIEE-TK----------TNYY--N-SS---NGYDK 239 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSCCCHHHHHHHHH-HT----------CEEE--E-CT---TCSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCccchHHHHHHHH-hC----------Ccee--c-hH---HHHHH
Confidence 899999999 9999999988877664 56666532 2222322 21 1223 4 33 22333
Q ss_pred HHHHHhcCccEEEEcCCC
Q 042694 185 LADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~ 202 (554)
..+ ...++|+||++++.
T Consensus 240 ~~~-~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 240 LKD-SVGKFDVIIDATGA 256 (366)
T ss_dssp HHH-HHCCEEEEEECCCC
T ss_pred HHH-hCCCCCEEEECCCC
Confidence 333 22579999999986
No 472
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.44 E-value=1.3 Score=43.47 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=45.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
-.|.+|+|+||+|-+|...+.-+...|. +|+...++ ..+.+++ .+. +. ++ |..+. +.+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~~~~~~~~~~-lGa-------~~--~i--~~~~~------~~~ 209 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTASKRNHAFLKA-LGA-------EQ--CI--NYHEE------DFL 209 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEECHHHHHHHHH-HTC-------SE--EE--ETTTS------CHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeccchHHHHHH-cCC-------CE--EE--eCCCc------chh
Confidence 4688999999999999998887776654 45554432 2222322 221 11 12 33333 213
Q ss_pred HHHhcCccEEEEcCCC
Q 042694 187 DVIAKEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~ 202 (554)
....+++|+||.+.+.
T Consensus 210 ~~~~~g~D~v~d~~g~ 225 (321)
T 3tqh_A 210 LAISTPVDAVIDLVGG 225 (321)
T ss_dssp HHCCSCEEEEEESSCH
T ss_pred hhhccCCCEEEECCCc
Confidence 4444789999999873
No 473
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=85.44 E-value=1.1 Score=46.18 Aligned_cols=99 Identities=17% Similarity=0.251 Sum_probs=59.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCc--cEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDV--GKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V--~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|+|.| .|-+|+.++++|.++. ++ ..|.+.+... -..+.+. . ++.+...+++..+. ++...
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~--------~--g~~~~~~~Vdadnv---~~~l~ 78 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQ--------Y--GVSFKLQQITPQNY---LEVIG 78 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHH--------H--TCEEEECCCCTTTH---HHHTG
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhh--------c--CCceeEEeccchhH---HHHHH
Confidence 5799999 6889999999999863 33 3666665321 0111111 1 23445556554411 12344
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
.++++.|+|+|++-. . ....++++|.+. + .+|++|+-
T Consensus 79 aLl~~~DvVIN~s~~-~--------------~~l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 79 STLEENDFLIDVSIG-I--------------SSLALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp GGCCTTCEEEECCSS-S--------------CHHHHHHHHHHH-T---CEEEESSC
T ss_pred HHhcCCCEEEECCcc-c--------------cCHHHHHHHHHc-C---CCEEECCC
Confidence 455666999996532 1 234689999985 3 58899874
No 474
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.11 E-value=0.78 Score=45.40 Aligned_cols=69 Identities=7% Similarity=0.030 Sum_probs=49.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|.|+ |-+|+.++++|.+.+. +.+++.. ..+ +++ ..+.++.||.+++ +.++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~------~~L~ 171 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVRKK-VLR-----------SGANFVHGDPTRV------SDLE 171 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGGHHH-HHH-----------TTCEEEESCTTSH------HHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCH------HHHH
Confidence 457999996 9999999999988653 4444432 222 221 3567899999987 7777
Q ss_pred HH-hcCccEEEEcCC
Q 042694 188 VI-AKEVDVIVNSAA 201 (554)
Q Consensus 188 ~l-~~~vdiViH~AA 201 (554)
.. .+++|.|+-+..
T Consensus 172 ~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 172 KANVRGARAVIVDLE 186 (336)
T ss_dssp HTCSTTEEEEEECCS
T ss_pred hcChhhccEEEEcCC
Confidence 66 678999997654
No 475
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.10 E-value=1.7 Score=42.95 Aligned_cols=76 Identities=13% Similarity=0.094 Sum_probs=45.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-.+++|+|+|| |-+|..+++.+...|. +|+.++.. ..+.+++ .+. +. + .|..+.++ .+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~-lGa-------~~--~--~d~~~~~~---~~~ 223 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIGDEKLELAKE-LGA-------DL--V--VNPLKEDA---AKF 223 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHH-TTC-------SE--E--ECTTTSCH---HHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHH-CCC-------CE--E--ecCCCccH---HHH
Confidence 45789999999 6699999887776553 67766532 2223322 221 11 1 24443311 123
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
...+..++|+||++++.
T Consensus 224 ~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 224 MKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp HHHHHSSEEEEEESSCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 33333689999999874
No 476
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.83 E-value=1.5 Score=43.87 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=46.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.|.+|+|+|+ |-+|...+..+...|. +|+..+. ...+.+++..+. +. ++ |..+. +..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~~~~~~~~~~lGa-------~~--v~--~~~~~------~~~ 245 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSPSKKEEALKNFGA-------DS--FL--VSRDQ------EQM 245 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGGHHHHHHTSCC-------SE--EE--ETTCH------HHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHhcCC-------ce--EE--eccCH------HHH
Confidence 6889999996 8899999887776553 5665542 223333323321 11 12 33332 455
Q ss_pred HHHhcCccEEEEcCCCC
Q 042694 187 DVIAKEVDVIVNSAANT 203 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v 203 (554)
..+..++|+||++++..
T Consensus 246 ~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 246 QAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp HHTTTCEEEEEECCSSC
T ss_pred HHhhCCCCEEEECCCcH
Confidence 66667899999998853
No 477
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=84.78 E-value=1.1 Score=47.27 Aligned_cols=34 Identities=32% Similarity=0.307 Sum_probs=24.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.++++++|||| |-+|+.++..|++.|. +|++.++
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~---~V~i~~R 395 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGA---KVVIANR 395 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEES
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEEC
Confidence 46789999999 6799999999999885 4555543
No 478
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=84.60 E-value=4.4 Score=45.24 Aligned_cols=107 Identities=15% Similarity=0.220 Sum_probs=67.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchhhhc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQAFM 163 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~~~~ 163 (554)
+..+|+|.|+.| +|+.+++.|.+.| |++|.++|... .+++++..+
T Consensus 410 ~~~~vlvvG~Gg-lG~~~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np------- 479 (805)
T 2nvu_B 410 DTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------- 479 (805)
T ss_dssp HTCCEEEECCSS-HHHHHHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST-------
T ss_pred hCCeEEEECCCH-HHHHHHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC-------
Confidence 678999999866 8999999999865 67888775321 122222221
Q ss_pred cCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc----------CCC
Q 042694 164 LSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC----------NKL 233 (554)
Q Consensus 164 ~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~----------~~~ 233 (554)
.-+|+.+..++... . ..+.+++|+||.|.-. +. .-..+-++|... ...
T Consensus 480 ~~~v~~~~~~~~~~------~--~~~~~~~d~vv~~~d~--~~------------~r~~in~~~~~~~~~~~g~~~~~~~ 537 (805)
T 2nvu_B 480 NCNVVPHFNKIQDF------N--DTFYRQFHIIVCGLDS--II------------ARRWINGMLISLLNYEDGVLDPSSI 537 (805)
T ss_dssp TCEEEEEESCGGGS------C--HHHHHTCSEEEECCSC--HH------------HHHHHHHHHHHTCCEETTEECGGGC
T ss_pred CCEEEEEecccccc------H--HHHHhcCCEEEECCCC--HH------------HHHHHHHHHHHHhhccccccccccC
Confidence 23677788887654 2 2456789999998532 21 111233444432 124
Q ss_pred ceEEEEeeceeccc
Q 042694 234 KLFVQVSTAYVNGQ 247 (554)
Q Consensus 234 k~~v~vST~~v~~~ 247 (554)
+++|+.++....|.
T Consensus 538 ~p~i~~~~~g~~G~ 551 (805)
T 2nvu_B 538 VPLIDGGTEGFKGN 551 (805)
T ss_dssp CCEEEEEEETTEEE
T ss_pred CcEEEeccccCcee
Confidence 68999888766554
No 479
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=84.13 E-value=0.78 Score=45.47 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=25.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII 143 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~ 143 (554)
+++|+|.||||++|+.|++.|.+ .|++ .+..+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~-~p~~-el~~l 35 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNR-HPHM-NITAL 35 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-CTTE-EEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHh-CCCC-cEEEE
Confidence 57899999999999999998876 4776 44443
No 480
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.99 E-value=1.7 Score=43.04 Aligned_cols=76 Identities=20% Similarity=0.193 Sum_probs=44.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.|.+|+|+|| |-+|...+..+...+. ++|+..+.. ..+.+++ .+. +.+ + |..++++ .+..
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~~~~~~~~~-~Ga-------~~~--~--~~~~~~~---~~~v 228 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSDFRRELAKK-VGA-------DYV--I--NPFEEDV---VKEV 228 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCHHHHHHHHH-HTC-------SEE--E--CTTTSCH---HHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHH-hCC-------CEE--E--CCCCcCH---HHHH
Confidence 6889999999 9999999887776664 245655432 2233332 211 111 1 3333311 1333
Q ss_pred HHHhc--CccEEEEcCCC
Q 042694 187 DVIAK--EVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~ 202 (554)
..+.. ++|+||++++.
T Consensus 229 ~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 229 MDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp HHHTTTSCEEEEEECSCC
T ss_pred HHHcCCCCCCEEEECCCC
Confidence 34432 69999999874
No 481
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.91 E-value=5.5 Score=38.66 Aligned_cols=107 Identities=10% Similarity=0.044 Sum_probs=64.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|.|+|| |.+|..+...|+..+. +..|+++|...- ....+.. .....++.. .+|.
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~g~a~dl~-----~~~~~~i~~-t~d~------------ 72 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTKGATMDLE-----IFNLPNVEI-SKDL------------ 72 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC-----CHHHHH-----HHTCTTEEE-ESCG------------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchHHHHHHHh-----hhcCCCeEE-eCCH------------
Confidence 3578999996 9999999999998875 557887764321 0000000 011124443 2443
Q ss_pred HHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEE
Q 042694 187 DVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFV 237 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v 237 (554)
.-++++|+||-+|+.-...+.-..+...|+.-.+++.+...+. ....++
T Consensus 73 -~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~i 121 (303)
T 2i6t_A 73 -SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVL 121 (303)
T ss_dssp -GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEE
T ss_pred -HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 1257999999998763322233466777888888888888774 244443
No 482
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=83.60 E-value=1.1 Score=47.44 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=66.2
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcC-------Cc--------hhhh-ccCc
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYG-------KS--------YQAF-MLSK 166 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~-------~~--------~~~~-~~~k 166 (554)
++-.+..+|+|.|+.| +|..+++.|.+.| |++|.++|.... ..+.+..- .. ..+. ..-+
T Consensus 27 q~~L~~~~VlvvG~GG-lGseiak~La~aG--Vg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~ 103 (531)
T 1tt5_A 27 QEALESAHVCLINATA-TGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVS 103 (531)
T ss_dssp HHHHHHCEEEEECCSH-HHHHHHHHHHTTT--CSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSB
T ss_pred HHHHhcCeEEEECcCH-HHHHHHHHHHHcC--CCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCe
Confidence 3345678999999855 9999999999865 778988864321 11211110 00 0000 0123
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
+.++..++... .+....+.++.|+||.+... + . .-..+.++|... -++||+.++.+..|
T Consensus 104 v~~~~~~~~~~-----~~~~~~~~~~~DvVi~~~d~--~----~--------~r~~ln~~c~~~--~iplI~~~~~G~~G 162 (531)
T 1tt5_A 104 GSFVEESPENL-----LDNDPSFFCRFTVVVATQLP--E----S--------TSLRLADVLWNS--QIPLLICRTYGLVG 162 (531)
T ss_dssp CCEESSCHHHH-----HHSCGGGGGGCSEEEEESCC--H----H--------HHHHHHHHHHHT--TCCEEEEEEETTEE
T ss_pred EEEeCCCcchh-----hhhhHHHhcCCCEEEEeCCC--H----H--------HHHHHHHHHHHc--CCCEEEEEecCCeE
Confidence 44444443210 01112355789999987432 2 1 122355677763 46899998877666
Q ss_pred c
Q 042694 247 Q 247 (554)
Q Consensus 247 ~ 247 (554)
.
T Consensus 163 ~ 163 (531)
T 1tt5_A 163 Y 163 (531)
T ss_dssp E
T ss_pred E
Confidence 5
No 483
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=83.36 E-value=0.74 Score=46.10 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=25.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
..+|.|.||||+.|..|++.|.+ .|.+ .+..+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~ 39 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLA 39 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEE
Confidence 46899999999999999996655 6766 555553
No 484
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=83.36 E-value=0.74 Score=46.10 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=25.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
..+|.|.||||+.|..|++.|.+ .|.+ .+..+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~ 39 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLA 39 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEE
Confidence 46899999999999999996655 6766 555553
No 485
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.23 E-value=1.3 Score=45.73 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=28.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQ 153 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~ 153 (554)
++|.|.| +|++|..+...|.+.|++ |++++. ...+.+.+
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~---V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGAN---VRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCHHHHHHHHH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCE---EEEEECCHHHHHHHHc
Confidence 5899998 599999999999998874 455543 33455544
No 486
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=82.52 E-value=4.8 Score=39.45 Aligned_cols=111 Identities=12% Similarity=0.101 Sum_probs=61.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|.|| |.+|..+...|...+. + .|.++|.. ..+............ ....++.. ..|.
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~------------ 67 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTY------------ 67 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCG------------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCCH------------
Confidence 368999998 9999999888887654 3 37777632 122111111110000 01123321 1332
Q ss_pred HHHhcCccEEEEcCCCCC-chhh-----HHHHHHHhchHHHHHHHHHHHcCCCceEEE
Q 042694 187 DVIAKEVDVIVNSAANTT-FDER-----YDIAIDINTRGPCRLMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~-----~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~ 238 (554)
..++++|+||-+++... .... -..+...|+.-.+.+.+...+. ....++.
T Consensus 68 -~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 123 (322)
T 1t2d_A 68 -DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFII 123 (322)
T ss_dssp -GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred -HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEE
Confidence 22579999999987532 1111 2244666777777787777664 2444443
No 487
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=82.28 E-value=0.72 Score=35.85 Aligned_cols=29 Identities=3% Similarity=-0.074 Sum_probs=27.0
Q ss_pred cccccc-cCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQ-GGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~-~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|.+ +|-|||..+.|...|.++||+.+
T Consensus 25 d~~l~~dlg~DSL~~veli~~lE~eF~I~i 54 (87)
T 2kci_A 25 ETSANDIDAWDSLSHMNLIVSLEVHYKIKF 54 (87)
T ss_dssp TCCSTTCCCCCSTHHHHHHHHHHHHHTCCC
T ss_pred CCCcccccCCChHHHHHHHHHHHHHHCCcc
Confidence 458987 99999999999999999999998
No 488
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=82.28 E-value=0.81 Score=37.50 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=27.4
Q ss_pred cccccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 32 KRSIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 32 ~~~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
..+.+| -++|-|||.++.|...|.++||+.+
T Consensus 46 ~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I 77 (113)
T 2cgq_A 46 TANQVLVDDLGFDSLKLFQLITELEDEFDIAI 77 (113)
T ss_dssp CTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCchhhhcCCCHHHHHHHHHHHHHHhCCCc
Confidence 344578 4899999999999999999999998
No 489
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.01 E-value=4.3 Score=39.67 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=56.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCch-hhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSY-QAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~-~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|.|| |.+|..++..|++.+. ..|++++.. ..+.......... ......++.. ..|+
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~------------ 67 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDDY------------ 67 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESCG------------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCCH------------
Confidence 468999998 9999999999998775 146666532 2222110000000 0001123321 1222
Q ss_pred HHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 187 DVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
..++++|+||-+++.-.- .....++...|..-.+.+++...+.
T Consensus 68 -~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 68 -ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp -GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred -HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 234789999999865321 1112233455666677777776654
No 490
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=81.97 E-value=1.4 Score=45.32 Aligned_cols=31 Identities=10% Similarity=0.175 Sum_probs=25.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
|+|.|.| +|++|..+...|.+.|+ +|++++.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~---~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGH---EVIGVDV 31 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEEC
Confidence 4788998 69999999999999876 4555553
No 491
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=81.97 E-value=0.86 Score=36.91 Aligned_cols=27 Identities=11% Similarity=-0.189 Sum_probs=25.4
Q ss_pred ccc------ccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHC------QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff------~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|+ ++|-|||.++.|...|.++||+.+
T Consensus 43 ~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i 75 (107)
T 3ce7_A 43 KLEELRTREDRLWDCLDTVEFVLDVEEIFDVTV 75 (107)
T ss_dssp CGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCC
T ss_pred cccccCcccccCCCHHHHHHHHHHHHHHHCCCC
Confidence 775 789999999999999999999998
No 492
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=81.90 E-value=0.69 Score=45.78 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=27.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|.|-||||++|+.|++.|+++++.+..++.+.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~ 34 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYA 34 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEee
Confidence 3699999999999999999987656555666554
No 493
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=81.81 E-value=3.9 Score=46.60 Aligned_cols=111 Identities=12% Similarity=0.141 Sum_probs=65.4
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------------------HHHHHHHcCCchhhh
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------------------FKCLKQTYGKSYQAF 162 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------------------~~~l~~~~~~~~~~~ 162 (554)
-++-....+|+|.|+.| +|+.+++.|.+.| |+++.++|... .+.+.+......
T Consensus 21 ~q~rL~~s~VlIvG~GG-lGseiak~La~aG--Vg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lN--- 94 (1015)
T 3cmm_A 21 AMLKMQTSNVLILGLKG-LGVEIAKNVVLAG--VKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELN--- 94 (1015)
T ss_dssp HHHHHTTCEEEEECCSH-HHHHHHHHHHHHC--CSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSC---
T ss_pred HHHHHhcCEEEEECCCh-HHHHHHHHHHHcC--CCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHC---
Confidence 34456788999999855 9999999999976 67888776321 111111111100
Q ss_pred ccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 163 MLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 163 ~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
..-++.++.+++.. .+.++.|+||.+... ++ ..-..+.++|.+. + .+||+.++.
T Consensus 95 P~v~v~~~~~~l~~-----------~~l~~~DvVv~~~d~-~~------------~~r~~ln~~c~~~-~-iplI~~~~~ 148 (1015)
T 3cmm_A 95 AYVPVNVLDSLDDV-----------TQLSQFQVVVATDTV-SL------------EDKVKINEFCHSS-G-IRFISSETR 148 (1015)
T ss_dssp TTSCEEECCCCCCS-----------TTGGGCSEEEECTTS-CH------------HHHHHHHHHHHHH-T-CEEEEEEEE
T ss_pred CCCeEEEecCCCCH-----------HHHhcCCEEEEcCCC-CH------------HHHHHHHHHHHHc-C-CCEEEEEec
Confidence 11256666666532 255789999976330 12 1223456677763 3 578887765
Q ss_pred eecc
Q 042694 243 YVNG 246 (554)
Q Consensus 243 ~v~~ 246 (554)
+.+|
T Consensus 149 G~~G 152 (1015)
T 3cmm_A 149 GLFG 152 (1015)
T ss_dssp TTEE
T ss_pred ccEE
Confidence 5433
No 494
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=81.39 E-value=1.1 Score=43.31 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.++++|+||||+ -+|+.++..|++.| +|++.++
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G----~V~v~~r 158 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN----NIIIANR 158 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS----EEEEECS
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC----CEEEEEC
Confidence 468999999985 79999999999876 4555554
No 495
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.22 E-value=2.1 Score=42.38 Aligned_cols=34 Identities=6% Similarity=0.134 Sum_probs=27.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.|.+|+|+||+|-+|...+..+...|. +|+..+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~ 183 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTAS 183 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeC
Confidence 688999999999999988877766553 6776654
No 496
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=81.14 E-value=2.4 Score=40.66 Aligned_cols=59 Identities=14% Similarity=0.308 Sum_probs=43.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+|++++|.|++|.+|+.+...|++.+-. |.+..+. . .+++
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~~------------------------------t------~~L~ 198 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHIK------------------------------T------KDLS 198 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT------------------------------C------SCHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCC------------------------------c------hhHH
Confidence 47899999999999999999999987643 3333210 1 3455
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
...++.|+||...+..++
T Consensus 199 ~~~~~ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 199 LYTRQADLIIVAAGCVNL 216 (285)
T ss_dssp HHHTTCSEEEECSSCTTC
T ss_pred HHhhcCCEEEECCCCCCc
Confidence 667899999998876444
No 497
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=81.00 E-value=3.9 Score=40.85 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=45.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
-.|.+|+|+||+|-+|...+.-+...|. +|+...+ ...+.++ ..+. +.+ + |..++++ .+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga---~Vi~~~~~~~~~~~~-~lGa-------~~v--i--~~~~~~~---~~~v 224 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY---IPIATCSPHNFDLAK-SRGA-------EEV--F--DYRAPNL---AQTI 224 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECGGGHHHHH-HTTC-------SEE--E--ETTSTTH---HHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCHHHHHHHH-HcCC-------cEE--E--ECCCchH---HHHH
Confidence 4678999999999999988877776664 3443333 3233333 2221 111 2 3333311 1334
Q ss_pred HHHh-cCccEEEEcCCC
Q 042694 187 DVIA-KEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~-~~vdiViH~AA~ 202 (554)
..+. .++|+||.+.+.
T Consensus 225 ~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 225 RTYTKNNLRYALDCITN 241 (371)
T ss_dssp HHHTTTCCCEEEESSCS
T ss_pred HHHccCCccEEEECCCc
Confidence 4443 369999999875
No 498
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=80.89 E-value=4.1 Score=35.22 Aligned_cols=73 Identities=12% Similarity=0.027 Sum_probs=42.9
Q ss_pred cccccHHHHHHHHhhCCCccEEEEEcchh-HHH---HHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc---
Q 042694 119 TGFLAKVLIEKILRTVPDVGKIFIINAEL-FKC---LKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK--- 191 (554)
Q Consensus 119 TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~---l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~--- 191 (554)
+|.++...++.|.+.|.+| |++.+... ... ..+... ....+...+++|++++ ++++.+.+.+
T Consensus 25 s~~p~~a~a~~La~~Ga~v--vi~~r~~~e~~~~~~~~~~~~-----~~G~~~~~i~~Dv~~~----~~~~v~~~~~~i~ 93 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDV--VINLMPDSSKDAHPDEGKLVT-----QAGMDYVYIPVDWQNP----KVEDVEAFFAAMD 93 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCE--EEECSCTTSTTSCTTHHHHHH-----HTTCEEEECCCCTTSC----CHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCCCE--EEECCCcccccccccHHHHHH-----HcCCeEEEecCCCCCC----CHHHHHHHHHHHH
Confidence 3578999999999877643 55544211 100 111100 0123567788999876 3455544432
Q ss_pred ---CccEEEEcCCC
Q 042694 192 ---EVDVIVNSAAN 202 (554)
Q Consensus 192 ---~vdiViH~AA~ 202 (554)
+-|+++||||.
T Consensus 94 ~~~G~dVLVnnAgg 107 (157)
T 3gxh_A 94 QHKGKDVLVHCLAN 107 (157)
T ss_dssp HTTTSCEEEECSBS
T ss_pred hcCCCCEEEECCCC
Confidence 23999999986
No 499
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=80.71 E-value=0.8 Score=36.54 Aligned_cols=27 Identities=0% Similarity=-0.146 Sum_probs=25.0
Q ss_pred ccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+|+ +||-|||.++.|+..++++||+.+
T Consensus 39 ~l~dDLglDSLd~VeLVm~lE~~fGi~i 66 (102)
T 2l9f_A 39 RFLDDLHMSSITVGQLVNEAARAMGLSA 66 (102)
T ss_dssp BTTTTSCCCHHHHHHHHHHHHHHHTCST
T ss_pred chhhhcCCcHHHHHHHHHHHHHHhCCCC
Confidence 665 599999999999999999999998
No 500
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=80.66 E-value=2.4 Score=40.82 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=26.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.+.+|.|.||+|-+|+.+++.+.+ .+++.-+-.++.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~-~~~~eLvg~vd~ 55 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQR-RKDVELCAVLVR 55 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHT-CSSEEEEEEBCC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEec
Confidence 346899999999999999999886 467633334443
Done!