BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042697
MSWLINSIEVSIGKTHLFLPTAKDVWDAVRETYSDLKNSSQILELKTRLCKLGKVIVQFL
SRPKRSVRRNPAANVDSITVHSTPKFEISKRSLKKALSQLADPVHENPQSELEKVKRSLR
KVNNPLVENSAFVQSEFEIEKQNHSLDKLPTSSICHEGLEWSLRYLGEKMKKKTTLKQSK
LPKVEAMPNLVEMNEMSDSGAKDKTIPMTNGNFEPKEDSTNNENNKSSRKVDVLTKKECV
ENELQSSPSLPSYIAATESAKAKLRLQGSSRSSEDGAEKNSGTGRHSRFELPYNINFSSS
KFSHIDSQFVSFSMYLYADLISVFEVFLPRLHLYPNISSLLNREVAGVITQLHYLCSKSE
RQSSLSI

High Scoring Gene Products

Symbol, full name Information P value
IQD30
AT1G18840
protein from Arabidopsis thaliana 2.6e-24
IQD31
AT1G74690
protein from Arabidopsis thaliana 4.4e-17
IQD29
AT2G02790
protein from Arabidopsis thaliana 1.4e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042697
        (367 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034929 - symbol:IQD30 "AT1G18840" species:370...   285  2.6e-24   1
TAIR|locus:2019205 - symbol:IQD31 "AT1G74690" species:370...   233  4.4e-17   1
TAIR|locus:2058862 - symbol:IQD29 "AT2G02790" species:370...   124  1.4e-06   2


>TAIR|locus:2034929 [details] [associations]
            symbol:IQD30 "AT1G18840" species:3702 "Arabidopsis
            thaliana" [GO:0005516 "calmodulin binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] InterPro:IPR000048 Pfam:PF00612 PROSITE:PS50096
            SMART:SM00015 EMBL:CP002684 GO:GO:0005773 ProtClustDB:CLSN2690497
            InterPro:IPR025064 Pfam:PF13178 EMBL:BT022035 IPI:IPI00535068
            RefSeq:NP_001031067.1 RefSeq:NP_173318.2 UniGene:At.41775
            ProteinModelPortal:Q501D2 SMR:Q501D2 STRING:Q501D2 PRIDE:Q501D2
            EnsemblPlants:AT1G18840.1 EnsemblPlants:AT1G18840.2 GeneID:838465
            KEGG:ath:AT1G18840 TAIR:At1g18840 InParanoid:Q501D2 OMA:HKENSAG
            PhylomeDB:Q501D2 Genevestigator:Q501D2 Uniprot:Q501D2
        Length = 572

 Score = 285 (105.4 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 95/279 (34%), Positives = 144/279 (51%)

Query:    54 KVIVQFLSRPKRSVRRNPAANVDSITVHSTP-KFEISKRSLKK-ALSQLADPVH--ENPQ 109
             +++    +RPK+SVR+ P++N+D+ +V  T  + E  KRS +K + SQ  +P+   +NPQ
Sbjct:   274 QIVEAEFARPKKSVRKVPSSNLDNSSVAQTSSELEKPKRSFRKVSTSQSVEPLPSMDNPQ 333

Query:   110 SELEKVKRSLRKVNNPLVENSAFVQ--SEFEIEKQNHSLDKLPTS--SICHEGLEWSLRY 165
              +LEKVKR LRKV+NP+VENS   Q   +  +EK N SL++   +      + +  ++  
Sbjct:   334 VDLEKVKRGLRKVHNPVVENSIQPQLVPQIAVEKPNGSLEESVNAFDEEKEDEVAETVVQ 393

Query:   166 LGEXXXXXXXXXXXXXXXVEAMPNLVEMNE---MSDS--GAKDKTIPMTNGNFEPKEDST 220
               E                  + N +E +E   M++     K++  P  N     KE+S 
Sbjct:   394 QPEELIQTHTPLGTNESLDSTLVNQIEESEENVMAEEKEDVKEERTPKQNH----KENSA 449

Query:   221 NNENNKSSRKVDVLTKKECVE-----NELQ-SSPSLPSYIAATESAKAKLRLQGSSRSSE 274
               EN KS +K   +T  +  E     N  Q SSP +PSY+ AT+SAKAKLRLQGSS   +
Sbjct:   450 GKENQKSGKKASSVTATQTAEFQESGNGNQTSSPGIPSYMQATKSAKAKLRLQGSSSPRQ 509

Query:   275 DGAEKNSGTGRHSRFELPYNINFSSSKFSHIDSQFVSFS 313
              G  + +      R+ LP + N S+   SH     VS S
Sbjct:   510 LGTTEKASR----RYSLPSSGN-SAKITSHSPKTRVSNS 543


>TAIR|locus:2019205 [details] [associations]
            symbol:IQD31 "AT1G74690" species:3702 "Arabidopsis
            thaliana" [GO:0005516 "calmodulin binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006084
            "acetyl-CoA metabolic process" evidence=RCA] [GO:0007020
            "microtubule nucleation" evidence=RCA] [GO:0010075 "regulation of
            meristem growth" evidence=RCA] InterPro:IPR000048 Pfam:PF00612
            PROSITE:PS50096 SMART:SM00015 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 EMBL:AC008263
            EMBL:AC011765 EMBL:AY099679 EMBL:AY128860 IPI:IPI00542533
            PIR:B96776 RefSeq:NP_177607.2 UniGene:At.34850
            ProteinModelPortal:Q8L4D8 SMR:Q8L4D8 IntAct:Q8L4D8 STRING:Q8L4D8
            PaxDb:Q8L4D8 PRIDE:Q8L4D8 EnsemblPlants:AT1G74690.1 GeneID:843808
            KEGG:ath:AT1G74690 TAIR:At1g74690 eggNOG:NOG244858
            HOGENOM:HOG000029044 InParanoid:Q8L4D8 OMA:SLRKVHN PhylomeDB:Q8L4D8
            ProtClustDB:CLSN2690497 Genevestigator:Q8L4D8 InterPro:IPR025064
            Pfam:PF13178 Uniprot:Q8L4D8
        Length = 587

 Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
 Identities = 75/239 (31%), Positives = 115/239 (48%)

Query:    62 RPKRSVRRNPAANVDSITVHSTPKFEISKRSLKKALSQLADPVHEN-------PQSELEK 114
             +PKRS R+  + +++   V   P+ E+ K  +K++L ++ +PV E+       P+ E+EK
Sbjct:   307 KPKRSFRKVSSQSIEPPAVED-PQIELEK--VKRSLRKVHNPVVESSIQPQRSPRKEVEK 363

Query:   115 VKRSLRKVNN---PLVENSAFVQSEFEIEKQNHSLDKLPTSSICHEGLEWSLRYLGEXXX 171
              K  + K      PLV  +A        EK+   + + P   + H  LE  +   G    
Sbjct:   364 PKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEISEQPEEEV-H-ALEMEVHTPGPLET 421

Query:   172 XXXXXXXXXXXXVEAMPNLVEMNEMSDSGAKDKTIPMTNGNFEPKEDSTNNENNKSSRKV 231
                               +VE     +   K++  P  N     KE+S   EN KS +K 
Sbjct:   422 NEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPNN----KENSAGKENQKSRKKG 477

Query:   232 DVLTKKECVENE--LQSSPSLPSYIAATESAKAKLRLQGSSRSSE-DGAEKNSGTGRHS 287
                +K E  E+    ++SPS+PSY+ AT+SAKAKLRLQGS +S+E DG EK +   RHS
Sbjct:   478 SATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQGSPKSAEQDGTEKATVPRRHS 536

 Score = 202 (76.2 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 67/207 (32%), Positives = 97/207 (46%)

Query:    61 SRPKRSVRRNPAANVDSITVHSTPKFEISKRSLKKALSQ-LADPVHENPQSELEKVKRSL 119
             ++PK+SVR+ PA+N +S +V ++ +FE  KRS +K  SQ +  P  E+PQ ELEKVKRSL
Sbjct:   280 AKPKKSVRKVPASNFESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSL 339

Query:   120 RKVNNPLVENSAFVQSE--FEIEKQNHSLDKLPTSS--ICHEGLEWSLRYLGEXXXXXXX 175
             RKV+NP+VE+S   Q     E+EK    ++K   SS  + HE  E  +    E       
Sbjct:   340 RKVHNPVVESSIQPQRSPRKEVEKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEIS 399

Query:   176 XXXXXXXXVEAM----PNLVEMNEMSDSGAKDKTIPMTNGNFEPKEDSTNNENNKSSRKV 231
                        M    P  +E NE  DS   ++         E K     +   + + K 
Sbjct:   400 EQPEEEVHALEMEVHTPGPLETNEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKP 459

Query:   232 DVLTKKECVENELQSSPSLPSYIAATE 258
             +   K+     E Q S    S  + TE
Sbjct:   460 N--NKENSAGKENQKSRKKGSATSKTE 484


>TAIR|locus:2058862 [details] [associations]
            symbol:IQD29 "AT2G02790" species:3702 "Arabidopsis
            thaliana" [GO:0005516 "calmodulin binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR000048 Pfam:PF00612 PROSITE:PS50096
            SMART:SM00015 GO:GO:0005886 EMBL:CP002685 InterPro:IPR025064
            Pfam:PF13178 IPI:IPI00525996 RefSeq:NP_178382.2 UniGene:At.51202
            ProteinModelPortal:F4IRA9 SMR:F4IRA9 PRIDE:F4IRA9
            EnsemblPlants:AT2G02790.1 GeneID:814808 KEGG:ath:AT2G02790
            OMA:TAERDDK Uniprot:F4IRA9
        Length = 636

 Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 34/94 (36%), Positives = 50/94 (53%)

Query:   198 DSGAKDKTIPMTNGNFEPKEDSTNNENNK-SSRKVDVLTKKECVENE---LQSSPSLPSY 253
             D  A++K I   +     +  +  +EN K S R+  +  K E    +    QS   +PSY
Sbjct:   454 DDSAEEK-IQEPDAQISSENGNVASENTKPSDRRASLPAKIENHHQDDGLTQSGRKIPSY 512

Query:   254 IAATESAKAKLRLQGSSRSSEDGAEKNSGTGRHS 287
             +A T SAKA++R QGS R +++  EKN  T RHS
Sbjct:   513 MAPTASAKARIRGQGSPRIAQEKPEKNGTTRRHS 546

 Score = 62 (26.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 27/83 (32%), Positives = 43/83 (51%)

Query:    64 KRSVRR--NPAANVDSITVHSTPKFEISKRSLKKALSQLADPVHENPQSELEKVKRSLRK 121
             KR VR+    +   +S T  ST   E  KR+++KA S L     E  + E +K K+S RK
Sbjct:   279 KRGVRKPTGVSTTANSSTSRSTADNEKPKRTVRKA-STLGK---ELSKIENDKSKQSSRK 334

Query:   122 VNNPLVENSAFVQSEFEIEKQNH 144
               + + E S+ V+ + E  + +H
Sbjct:   335 STSAIKEGSS-VEVKDEKPRISH 356


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      367       352   0.00078  117 3  11 23  0.46    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  224 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.42u 0.08s 40.50t   Elapsed:  00:00:27
  Total cpu time:  40.42u 0.08s 40.50t   Elapsed:  00:00:28
  Start:  Fri May 10 20:01:32 2013   End:  Fri May 10 20:02:00 2013

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