Query 042701
Match_columns 1075
No_of_seqs 184 out of 227
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:01:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swh_A MUNC13-1, protein UNC-1 100.0 1.4E-46 4.8E-51 421.4 24.0 304 677-1030 7-339 (341)
2 2fji_1 Exocyst complex compone 98.8 5.3E-07 1.8E-11 103.3 22.8 331 678-1058 6-354 (399)
3 2a2f_X Exocyst complex compone 95.4 0.75 2.6E-05 51.5 19.8 178 821-1016 138-317 (325)
4 3hr0_A COG4; conserved oligome 94.6 0.36 1.2E-05 52.5 14.0 217 821-1058 21-253 (263)
5 3fhn_A Protein transport prote 81.1 56 0.0019 40.2 19.4 271 682-1014 363-653 (706)
6 2jdj_A HAPK, REDY-like protein 45.9 5.4 0.00018 37.8 0.7 42 59-104 10-51 (105)
7 1m9i_A Annexin VI; calcium-bin 40.5 2.3E+02 0.0079 34.6 13.9 290 373-706 123-449 (672)
8 2gz6_A N-acetyl-D-glucosamine 28.4 91 0.0031 34.4 7.1 77 408-485 173-270 (388)
9 2z84_A UFSP1, UFM1-specific pr 25.8 42 0.0014 35.5 3.5 40 64-103 122-176 (218)
10 2p06_A Hypothetical protein AF 23.0 21 0.00072 32.3 0.5 66 375-460 31-99 (114)
11 1fp3_A N-acyl-D-glucosamine 2- 20.7 88 0.003 34.8 5.1 75 410-485 183-279 (402)
No 1
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-46 Score=421.44 Aligned_cols=304 Identities=16% Similarity=0.272 Sum_probs=223.3
Q ss_pred chhhHHHHHHHHHHHhhhhHHHHHHHHHhcCccccCC---CCCCCCCcHHHHHHHHHHHHHHHHcCCCCCchHHH---HH
Q 042701 677 IESISGTLVLRWINSQLGRILSWVERAIQQERWDPIS---PQQRHASSIVEVYRIVEETVDQFFALQVPMRSTEL---NA 750 (1075)
Q Consensus 677 lE~~f~~~V~~Wi~e~~~k~~ewV~rAie~E~WeP~S---~~e~hSsSVVDIFrii~Etld~ff~L~wp~~~~la---t~ 750 (1075)
++.||.|||++|+++..+++.+||++|++.|+|+|.+ ++.+||+||||+|++|+|+++++.+|+|||+++.+ +.
T Consensus 7 ~~~wF~~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t~ 86 (341)
T 3swh_A 7 YPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRR 86 (341)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCccccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 5889999999999999999999999999999999975 78899999999999999999999999999999876 99
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhhhhhhhHhhhccCCCcchhhccccccccccccchhhhccHH
Q 042701 751 LFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLH 830 (1075)
Q Consensus 751 L~kgI~~~lq~Y~~~V~~~~g~ke~~iP~~P~LTR~~kes~~~~~~KKa~~e~~~p~e~~~~~~~~~f~p~lCVrLNNLe 830 (1075)
|++.|++++..||+.+.++. . +.|.++ +...+||.||||+
T Consensus 87 l~~~i~~~~~~Y~~~l~~~~-~-----------~~~~~e----------------------------~~~~~Cv~lNNie 126 (341)
T 3swh_A 87 FAKTISNVLLQYADIVSKDF-A-----------SYCSKE----------------------------KEKVPCILMNNTQ 126 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-H-----------HHCCTT----------------------------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-H-----------hhhhhh----------------------------cccchhhhcccHH
Confidence 99999999999999997632 1 001110 1224999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCchhhhhhHHhhhhc--CCCcccchhhh-HHHHHHHHHHHHHHhccceeeeccchhhhh
Q 042701 831 YAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSK--SFTKNDTFDGS-RKDINAAIDRICEFTGTKIIFWDLREPFID 907 (1075)
Q Consensus 831 yi~~qLd~LEk~I~~~~~~~~ss~~~Lsps~~~~~~--~~~ls~~F~~s-r~ai~~aI~ql~e~ia~rvVF~Dlr~~~~d 907 (1075)
|+|.+|++|.+.|...-.....+ .+-..++.+.+ .+++...|... +..|..+++||+..+.. +++. .
T Consensus 127 ~lR~~L~~l~~~l~~~~l~~~~~--~~~~~lq~~l~~vl~~l~~~~~~~~~~~i~~~v~~m~~~l~~------i~~~--~ 196 (341)
T 3swh_A 127 QLRVQLEKMFEAMGGKELDAEAS--GTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQ------VKGT--G 196 (341)
T ss_dssp HHHHHHHHHHHHTTTTTSCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------CC-----
T ss_pred HHHHHHHHHHHhcchhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccc--c
Confidence 99999999999985533222211 11122222211 22455666555 67788888998876632 2211 0
Q ss_pred hcc---C---CccchhhHHHhhHhHHhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh------------cCCCCCCc
Q 042701 908 NLY---K---PSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVL------------LNGGPFRV 969 (1075)
Q Consensus 908 ~LY---~---g~Va~sRI~PlL~~Ld~~L~~l~s~l~d~vr~rVvkeL~KAs~e~~l~VL------------LaGGpsR~ 969 (1075)
++- . ....+++|+|||+|||++|.+++++|++++++||+++||++++++|+.++ ++||+.|.
T Consensus 197 ~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~~~~r~ 276 (341)
T 3swh_A 197 NVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVREEAKS 276 (341)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC--------
T ss_pred cCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhhHhhhcccccCC
Confidence 000 0 12247899999999999999999999999999999999999999999987 68999999
Q ss_pred cChhhHHHHHHHHHHHHHhhhcCCCCCcHHHHHH--HHHHHHHHHhhcccchHHHHHHHHhcc
Q 042701 970 FFPSDAKQLEEDLEILKEFFISGGDGLPRGVVEN--QVARARHVVKLHGYETRELIDDLRSGS 1030 (1075)
Q Consensus 970 Fs~~D~~ilEeDL~~LKdfF~A~GeGLp~e~Vek--~~~~l~~VL~Ly~q~Td~LIe~f~~~~ 1030 (1075)
|++++|++++++|+.|++||||||+|||.+++|+ ++++++++|+||+++|++||++|....
T Consensus 277 ~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~~~ 339 (341)
T 3swh_A 277 LTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQTQ 339 (341)
T ss_dssp --CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC---------------
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence 9999999999999999999999999999999997 499999999999999999999997653
No 2
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.76 E-value=5.3e-07 Score=103.26 Aligned_cols=331 Identities=12% Similarity=0.153 Sum_probs=203.4
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHHHHHHhcC--ccc-----cCC--CCCCCCCcHHHHHHHHHHHHHHHHcCCCC-CchHH
Q 042701 678 ESISGTLVLRWINSQLGRILSWVERAIQQE--RWD-----PIS--PQQRHASSIVEVYRIVEETVDQFFALQVP-MRSTE 747 (1075)
Q Consensus 678 E~~f~~~V~~Wi~e~~~k~~ewV~rAie~E--~We-----P~S--~~e~hSsSVVDIFrii~Etld~ff~L~wp-~~~~l 747 (1075)
++....++..|++....++.+|++|++++| .|. |.. +...|++.++|||+|++|.++.-....=. .-..+
T Consensus 6 ~~~~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~t~~~~dvfqml~eql~~a~~~~~~~l~~~v 85 (399)
T 2fji_1 6 DKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAKILVGV 85 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEECHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCeeCCchHHHHHHHHHHHHHHHhCCCcccHHHH
Confidence 345678899999999999999999999988 666 221 33558999999999999999998876521 11122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhhhhhhhHhhhccCCCcchhhccccccccccccchhhhc
Q 042701 748 LNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLN 827 (1075)
Q Consensus 748 at~L~kgI~~~lq~Y~~~V~~~~g~ke~~iP~~P~LTR~~kes~~~~~~KKa~~e~~~p~e~~~~~~~~~f~p~lCVrLN 827 (1075)
+...++.+.+-...|...+... ..++... ....++. ++..+|++. ....++..+|.-+|
T Consensus 86 ~~~~~~~L~~f~~~~~~~l~~~-------------~~~~~~~--~~~~~~~--~~~~~~~~~----~~~~~~e~liA~~N 144 (399)
T 2fji_1 86 VERFSDLLTKRQKNWISKISEE-------------IKKQINY--NHKYDID--PESITPEDE----CPGGLVEYLIAVSN 144 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHH--HHTTTTG--GGSCCTTTC----CCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------HHHHhcc--ccccccc--ccccCcccc----ccccHHHhhhhhhc
Confidence 2333333333333333333220 0000000 0000010 111111000 01123556788889
Q ss_pred cHHHHHHHHHHHHHHHHhhhccCCCchhhhhhHHhhhhcCCCcccchhhh----HHHHHHHHHHHHHHhccceeeeccch
Q 042701 828 TLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGS----RKDINAAIDRICEFTGTKIIFWDLRE 903 (1075)
Q Consensus 828 NLeyi~~qLd~LEk~I~~~~~~~~ss~~~Lsps~~~~~~~~~ls~~F~~s----r~ai~~aI~ql~e~ia~rvVF~Dlr~ 903 (1075)
|-......+.+|.+.+...... ...+ .+...|+.. ..-.+.|++++++. ||.|++.
T Consensus 145 n~~~~~e~~~~l~~~~~~~~~~----------~~~~-----~~~~~l~~~~~~f~~l~~~~~~~L~~~-----if~dl~p 204 (399)
T 2fji_1 145 DQMKAADYAVAISSKYGKLVSK----------VYEK-----QITNHLEGTLDGFAEVAQCSSLGLITL-----MFDDLRK 204 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCH----------HHHH-----HHHHHHHTTHHHHHHHHHHHHHHHHHH-----HHHTTHH
T ss_pred cHHHHHHHHHHHHHHHHHhccH----------HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHH
Confidence 9998888888888766432210 0000 011122222 33455667776665 4678775
Q ss_pred hhhhhccCCc-cchhhHHHhhHhHHhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCccChhhHHHHHHHH
Q 042701 904 PFIDNLYKPS-VSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDL 982 (1075)
Q Consensus 904 ~~~d~LY~g~-Va~sRI~PlL~~Ld~~L~~l~s~l~d~vr~rVvkeL~KAs~e~~l~VLLaGGpsR~Fs~~D~~ilEeDL 982 (1075)
.| ..+|... -...-++.++..++..+.-+...+++...+.++.++...++-.++..++.+..-|.....=.+-|..|.
T Consensus 205 ~~-~~lft~~W~~~~~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~~Yl~~l~~~~~~~~~~~~~~~~l~~D~ 283 (399)
T 2fji_1 205 PY-QEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDF 283 (399)
T ss_dssp HH-TTTTSGGGTTCCHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHGGGGCCCCCCGGGHHHHHHHHHH
T ss_pred HH-HHhCCchhcCCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHH
Confidence 43 2222211 011268889999999999998899999999999999999999999988862222322144456899999
Q ss_pred HHHHHhhhcCCCCCc--HHHHHHHHHHHHHHHhhcccch-HHHHHHHHhcccccccCCCCCCCCCcccchhhhccCCCh
Q 042701 983 EILKEFFISGGDGLP--RGVVENQVARARHVVKLHGYET-RELIDDLRSGSSQDMLGTRGKLGADSETLLRILCHRSDS 1058 (1075)
Q Consensus 983 ~~LKdfF~A~GeGLp--~e~Vek~~~~l~~VL~Ly~q~T-d~LIe~f~~~~~~~~~g~~~k~~~d~nTILRVLchR~D~ 1058 (1075)
+.|++||-.-|.+-+ ...+......+..+.. ...++ +.+.+.|..... .+. ...++.|-+||.-|.|=
T Consensus 284 ~~l~~~f~~~~~~~~~~~~~v~~~~~~l~~l~~-L~~d~~~~i~~~~~~l~~--~yp-----D~~~~~V~aiL~~R~D~ 354 (399)
T 2fji_1 284 EIFYQLFVKVLDGNESKDTLITQNFTVMEFFMD-LSCEPIDSILDIWQKYLE--VYW-----DSRIDLLVGILKCRKDV 354 (399)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHH-HHHSCGGGHHHHHHHHHT--TCT-----TCCSHHHHHHHTTCTTC
T ss_pred HHHHHHHHHhccccchhhHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHH--hCC-----CCCHHHHHHHHHhccCC
Confidence 999999987665432 3456777777777777 66788 888887765542 121 14588899999999873
No 3
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}
Probab=95.42 E-value=0.75 Score=51.52 Aligned_cols=178 Identities=15% Similarity=0.150 Sum_probs=107.6
Q ss_pred cchhhhccHHHHHHHHHHHHHHHHhhhccCCCchhhhhhHHhhhhcCCCcccchhhhHHHHHHHHHHHHHHhcccee-ee
Q 042701 821 ALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKII-FW 899 (1075)
Q Consensus 821 ~lCVrLNNLeyi~~qLd~LEk~I~~~~~~~~ss~~~Lsps~~~~~~~~~ls~~F~~sr~ai~~aI~ql~e~ia~rvV-F~ 899 (1075)
+..-.+=|++|...-...||+.+... ....++. .+ .-...|..++.++.+.|-. .+..|+- |.
T Consensus 138 qi~Qi~iNl~~le~ac~~le~~l~~~-~~~~~~~-~l-----------~a~~~f~~~r~~Ae~~I~~---~v~~KIDdfl 201 (325)
T 2a2f_X 138 QLIQIIIDTQYLEKAGPFLDEFVCHM-TNTERSV-SQ-----------TPSAMFHVARQDAEKQVGL---RICSKIDEFF 201 (325)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHH-HTCCC-------------------CCSCCCTTHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCccc-ch-----------hHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 34445567777777777777777542 2221111 11 1345676666555544322 2222221 11
Q ss_pred ccchhhhhhccCCccchhhHHHhhHhHHhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCccChhhHHHHH
Q 042701 900 DLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLE 979 (1075)
Q Consensus 900 Dlr~~~~d~LY~g~Va~sRI~PlL~~Ld~~L~~l~s~l~d~vr~rVvkeL~KAs~e~~l~VLLaGGpsR~Fs~~D~~ilE 979 (1075)
++-+.=|..--..+-++.=|..++.||+...+. -..+...++..+....|+.+=+.++-.|++ ..-+.++..=+.-++
T Consensus 202 ~la~yDW~~~~~~~~ps~yi~dli~fL~~~f~s-l~~LP~~v~~~~~~~a~~his~~l~~~Ll~-~~vk~in~~av~~~~ 279 (325)
T 2a2f_X 202 ELSAYDWLLVEPPGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYD-EDVKQISTGALTQIN 279 (325)
T ss_dssp TTCCTTCC----CCSCCHHHHHHHHHHHHHHHT-TTTTSHHHHHHHHHHHHHHHHHHHHHHHTC-------CCTTHHHHH
T ss_pred HhcccCCCCCCCCCCccHHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHhcC-cchhhcCHHHHHHHH
Confidence 222110222223445677799999999999994 668899999999999999999999998874 334778999999999
Q ss_pred HHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHHhhcc
Q 042701 980 EDLEILKEFFISGG-DGLPRGVVENQVARARHVVKLHG 1016 (1075)
Q Consensus 980 eDL~~LKdfF~A~G-eGLp~e~Vek~~~~l~~VL~Ly~ 1016 (1075)
.|++.|.+|=-.++ .|+...-+......+|+.+.|+-
T Consensus 280 ~Dv~~lE~fa~~~~v~~l~~~~L~~~F~eLrQli~Ll~ 317 (325)
T 2a2f_X 280 LDLMQCEFFAASEPVPGLKEGELSKYFLRNRQLLDLLI 317 (325)
T ss_dssp HHHHHHHHHHTTCSSSSCCSSTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccchHHHHHHHHHHHHHHHH
Confidence 99999999954322 26654455566778888888763
No 4
>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}
Probab=94.60 E-value=0.36 Score=52.51 Aligned_cols=217 Identities=12% Similarity=0.176 Sum_probs=131.4
Q ss_pred cchhhhccHHHHHHHHHHHHHHH----HhhhccCCCchh---hhhhHHhhhhcCCCcccchhh-hHHHHHHHHHHHH-HH
Q 042701 821 ALCVQLNTLHYAISQLNKLEDSI----LERWTRKKPHEN---FLKKLVEEKSKSFTKNDTFDG-SRKDINAAIDRIC-EF 891 (1075)
Q Consensus 821 ~lCVrLNNLeyi~~qLd~LEk~I----~~~~~~~~ss~~---~Lsps~~~~~~~~~ls~~F~~-sr~ai~~aI~ql~-e~ 891 (1075)
.-||.|||++-...-+.+|-+.+ ...+.....++. .+..++. .+.. |.. .+..++++|+++. ..
T Consensus 21 ~Flv~LNnld~s~eyi~rL~~~l~~~l~~~Fp~~~d~~~~~~kv~~~l~------~l~~-~~~k~~~ll~~gi~~Lf~~~ 93 (263)
T 3hr0_A 21 SFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLS------DLAA-VSNKFRDLLQEGLTELNSTA 93 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHH------HHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred hHhheeccHHHHHHHHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH------HHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 47999999886665555554444 333322111110 0111111 2222 322 2466788888886 46
Q ss_pred hccce-----eeeccchhhhhhccCC-ccchhhHHHhhHhHHhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 042701 892 TGTKI-----IFWDLREPFIDNLYKP-SVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGG 965 (1075)
Q Consensus 892 ia~rv-----VF~Dlr~~~~d~LY~g-~Va~sRI~PlL~~Ld~~L~~l~s~l~d~vr~rVvkeL~KAs~e~~l~VLLaGG 965 (1075)
+..|+ .|.|....+-+.-|.. +..+.-++.+...+++.|.-+..+++....++++.-+...+...+++.++.
T Consensus 94 ikprLr~~l~~f~~~~y~l~eee~~~~e~~d~~~~~F~~~w~~ll~p~k~~Lt~~~y~~Ll~~~~~~la~~lE~~i~~-- 171 (263)
T 3hr0_A 94 IKPQVQPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVELEKVVLK-- 171 (263)
T ss_dssp THHHHHHHHHGGGGSCBSCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred hHHHHHHHHHHHhcccccCCHhHHhhhhcccHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 65554 1333332221111110 112334677788888889999999999999999999999888889998886
Q ss_pred CCCccChhhHHHHHHHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHHhhcccchHHHHHHHHhcccccccCCCCCCCCC
Q 042701 966 PFRVFFPSDAKQLEEDLEILKEFFISGGD-GLPRGVVENQVARARHVVKLHGYETRELIDDLRSGSSQDMLGTRGKLGAD 1044 (1075)
Q Consensus 966 psR~Fs~~D~~ilEeDL~~LKdfF~A~Ge-GLp~e~Vek~~~~l~~VL~Ly~q~Td~LIe~f~~~~~~~~~g~~~k~~~d 1044 (1075)
..|+.--.-.+|.|++.|-.||+..|. ++ ......+.+++.+...+..+=+.+| ......|. .-.-+
T Consensus 172 --~~fn~lGal~LdrDvr~li~~~~~~~~~~l-----RekF~RL~QI~~lLnle~~eev~d~---~~~~~~~~--~W~Ls 239 (263)
T 3hr0_A 172 --STFNRLGGLQFDKELRSLIAYLTTVTTWTI-----RDKFARLSQMATILNLERVTEILDY---WGPNSGPL--TWRLT 239 (263)
T ss_dssp --CCBCHHHHHHHHHHHHHHHHHHHTTSCTTH-----HHHTHHHHHHHHHHTCSSGGGGGGT---SGGGGTTC--CCCSC
T ss_pred --CCcCchhHHHHHHHHHHHHHHHHhccchhh-----hHHHHHHHHHHHHHcCCChHHHHHH---hcccCCCc--cccCC
Confidence 348888888999999999999988443 43 3335677788888776653311112 11101111 12367
Q ss_pred cccchhhhccCCCh
Q 042701 1045 SETLLRILCHRSDS 1058 (1075)
Q Consensus 1045 ~nTILRVLchR~D~ 1058 (1075)
|+-+-|||..|.|-
T Consensus 240 ~~E~r~il~lRvDf 253 (263)
T 3hr0_A 240 PAEVRQVLALRIDF 253 (263)
T ss_dssp HHHHHHHHTTBTTS
T ss_pred HHHHHHHHHhhccC
Confidence 89999999999884
No 5
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=81.13 E-value=56 Score=40.21 Aligned_cols=271 Identities=15% Similarity=0.173 Sum_probs=136.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCccccCCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHH-HHHH
Q 042701 682 GTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGID-NAFQ 760 (1075)
Q Consensus 682 ~~~V~~Wi~e~~~k~~ewV~rAie~E~WeP~S~~e~hSsSVVDIFrii~Etld~ff~L~wp~~~~lat~L~kgI~-~~lq 760 (1075)
..+..+|++--.+-..+=.+..+..++ +. ..-|-.++|++..+.+.++-|+.+.-..-..+-..|..-|. ..+.
T Consensus 363 ~~~f~~WL~~Ek~fA~~rf~~Ii~s~d-~l----t~sA~~~~~LLe~It~~l~~~~~~rY~~L~~~~~Kl~f~IqiqL~d 437 (706)
T 3fhn_A 363 DEVWEKWINYEVEMANRQFINITKNPE-DF----PKSSQNFVKLINKIYDYLEPFYDLDFDLLVRYKLMTCSLIFMNLTS 437 (706)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSGG-GG----GGHHHHHHHHHHHHHHHHSHHHHCCCGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc-cC----CHHHHHHHHHHHHHHHhccccchhhcccccchHHHHHHHHHHhhHH
Confidence 345577888777777777777766544 11 11222444555555555567775554322233333322222 2334
Q ss_pred HHHHHHHhhcCCCCCCCCCCcchhhhhhhhhhhhhHhhhccCCCcchhhccccccccccccchhhhccHHHHHHHHHHHH
Q 042701 761 VYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLE 840 (1075)
Q Consensus 761 ~Y~~~V~~~~g~ke~~iP~~P~LTR~~kes~~~~~~KKa~~e~~~p~e~~~~~~~~~f~p~lCVrLNNLeyi~~qLd~LE 840 (1075)
.|-..+.. .... +. +. +++. . .-+.|..||++.++...|...-
T Consensus 438 ~Y~~~L~~----~s~l-gr----~~-tke~--------------------------~-~~~g~~~L~~L~~V~~~L~dWs 480 (706)
T 3fhn_A 438 SYLDYILT----VDSL-NE----TR-TKEQ--------------------------E-LYQTMAKLQHVNFVYRKIKSLS 480 (706)
T ss_dssp HHHHHHHT----CCCS-CS----EE-EHHH--------------------------H-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhC----cccc-cc----cc-chHH--------------------------H-HHHHHHHHHHHHHHHHHHHHhc
Confidence 45544422 1111 10 00 0100 0 1236788999888885444322
Q ss_pred HHHHhhhccCCCchhhhhhHHhhhhcCCCcccchhhhHHHHHHHHHH-HHHHhccceeeeccchh--------hhhhccC
Q 042701 841 DSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDR-ICEFTGTKIIFWDLREP--------FIDNLYK 911 (1075)
Q Consensus 841 k~I~~~~~~~~ss~~~Lsps~~~~~~~~~ls~~F~~sr~ai~~aI~q-l~e~ia~rvVF~Dlr~~--------~~d~LY~ 911 (1075)
+.+-- .. |-..+++++ .....+.|+.+......-..+ +-+.+...++ ...+.. -|.+.-.
T Consensus 481 ddvfF--Le-------Lw~~l~~~t-~s~~gSIFDetIs~Y~~L~~~~~~~~Iv~~v~-~eik~~lK~Y~k~s~W~s~~~ 549 (706)
T 3fhn_A 481 SNFIF--IQ-------LTDIVNSTE-SKKYNSLFQNVENDYEKAMSTDMQNSIVHRIQ-KLLKETLRNYFKISTWSTLEM 549 (706)
T ss_dssp TSHHH--HH-------HHHHHHHHT-TCCCSCTTHHHHHHHHHHHHTHHHHHHHHHHH-HHHHHHTHHHHHCCGGGTCCC
T ss_pred CCchh--HH-------HHHHHhccc-CcccCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccCcccCC
Confidence 11100 00 000011111 123468999987777666666 5555433322 222221 1333322
Q ss_pred Cc--------cchhhHHHhhHhHHhHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHHHhcCCCC-CCccChhhHHHHHHH
Q 042701 912 PS--------VSKSRLESLIEPLDVELSKLCDV-IVEPLRDRVVTGLLQASLDGLLRVLLNGGP-FRVFFPSDAKQLEED 981 (1075)
Q Consensus 912 g~--------Va~sRI~PlL~~Ld~~L~~l~s~-l~d~vr~rVvkeL~KAs~e~~l~VLLaGGp-sR~Fs~~D~~ilEeD 981 (1075)
+. ..++-+-|+|..|...|..|... +....+.+ +|+.+.+.+...+...=- ...|+.....-+..|
T Consensus 550 ~~~~~~~~~lspSaEL~~~L~~L~~~L~~L~~~lL~~~~f~~----IwR~ia~~Ld~yL~e~IL~~nkFS~~Ga~Qf~~D 625 (706)
T 3fhn_A 550 SVDENIGPSSVPSAELVNSINVLRRLINKLDSMDIPLAISLK----VKNELLNVIVNYFTESILKLNKFNQNGLNQFLHD 625 (706)
T ss_dssp C------CCCCCCGGGHHHHHHHHHHHHHHHTSCCCHHHHHH----HHHHHHHHHHHHHHHTTTTTSCBCHHHHHHHHHH
T ss_pred CCcccccccCCCCHHHHHHHHHHHHHHHHHHHccCCHHHHHH----HHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHH
Confidence 21 11556889999999999888887 46555544 555544442222211111 358999999999999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHhh
Q 042701 982 LEILKEFFISGGDGLPRGVVENQVARARHVVKL 1014 (1075)
Q Consensus 982 L~~LKdfF~A~GeGLp~e~Vek~~~~l~~VL~L 1014 (1075)
++.|...|. -++|-+ +.....++..+.|
T Consensus 626 ~~~L~~v~~-lp~~~~----~~~~~~L~E~l~L 653 (706)
T 3fhn_A 626 FKSLSSILS-LPSHAT----NYKCMSLHELVKI 653 (706)
T ss_dssp HHHHHTTSC-CCTTCC----CHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCcch----hhHHHHHHHHHHH
Confidence 999999888 444442 2334444444444
No 6
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=45.94 E-value=5.4 Score=37.80 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=34.1
Q ss_pred hhcCCccchhHHHhhhhcCCCCCcccCCCCcceEEEeeCCCCCCCC
Q 042701 59 AKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNPQSSGSP 104 (1075)
Q Consensus 59 ~~~g~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~l~~~p~~~~~~ 104 (1075)
+|.|+ | -+|.++|..+.+||....-+++ .+|-|++++..|.|
T Consensus 10 L~~g~--d-~~aFe~w~~evD~P~~~~LpsV-rsF~V~R~~~~g~~ 51 (105)
T 2jdj_A 10 LFDVA--Q-ADAFEFWVQNVDYATCPDLPSV-VRFDVHRASLQANA 51 (105)
T ss_dssp ESCGG--G-HHHHHHHHHHTHHHHGGGCTTE-EEEEEEECCCCTTC
T ss_pred cCCCC--C-HHHHHHHHHhchhhhccCCCcc-eeEEEEecccCCCC
Confidence 45555 3 3688999999999999999999 78899999888543
No 7
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=40.53 E-value=2.3e+02 Score=34.59 Aligned_cols=290 Identities=14% Similarity=0.114 Sum_probs=142.3
Q ss_pred hHHHHHHHHHHhhhhcCCCCCCCCCCcccccCCCcccHHHHHHHHhhh---ccccCCccchHHHHHHHHHHhhhcccccc
Q 042701 373 TECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSV---FDVLDEGKLTEEVEEILELLKSTWRVLGI 449 (1075)
Q Consensus 373 ~e~m~~l~~~~~~La~r~~~~~~~~e~chWadgyplNv~LY~~LL~~~---FD~~de~~v~eEvdElleliK~TW~~LGI 449 (1075)
.+=++.++++-..+=.|+..- +...=..| ++ =+|...|+++- .+..|+..+.++|.+|.+-.++-|++
T Consensus 123 n~ei~~ik~aY~~~y~~sLe~----di~~dtsG-~f-~klLv~L~~~~R~e~~~vd~~~a~~DA~~L~~Age~k~gt--- 193 (672)
T 1m9i_A 123 NEQMHQLVAAYKDAYERDLEA----DIIGDTSG-HF-QKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGT--- 193 (672)
T ss_dssp HHHHHHHHHHHHHHSCSCHHH----HHHHHCCH-HH-HHHHHHHHHCCCCCSCCCCHHHHHHHHHHHHHHTTTSSSC---
T ss_pred HHHHHHHHHHHHHHhCcchHH----HHhccCCc-cH-HHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhcccCCC---
Confidence 344667777766665554321 11111112 11 13555555542 12346677888999999999888854
Q ss_pred chh-HHHHHH------HHHhhhhhhccCchhH-----------HHHHHHHhhhccccccCCccchhhhhhhhhhhhhcCC
Q 042701 450 TET-MHYTCY------ALVLFRQYVITSEQGM-----------LQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGG 511 (1075)
Q Consensus 450 ~q~-~Hn~cf------~WvLF~qyv~Tge~~L-----------l~~a~~~l~~v~~~~~~~~~~~~y~k~l~~~~~~~~~ 511 (1075)
++. +-.+.- ....|+.|-..-..++ +..|+..+-+.+.+ ....+.+.|..+..|.|+
T Consensus 194 de~~fi~Il~~RS~~~L~~v~~~Y~~~~g~~i~~aI~~e~sG~~~~aL~~iv~c~~~-----~~~yfA~~L~~amkG~GT 268 (672)
T 1m9i_A 194 DEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRS-----TPEYFAERLFKAMKGLGT 268 (672)
T ss_dssp CHHHHHHHHHHSCHHHHHHHHHHHHHHSSSCHHHHHTTTSCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHTSSSSSC
T ss_pred cHHHHHHHHHhCCHHHHHHHHHHHHHHhCccHHHHHHHhcCchHHHHHHHHHHHHCC-----hHHHHHHHHHHHhccCCC
Confidence 432 111111 1345666643321111 11111111111111 134566677777888876
Q ss_pred CcchHHHHHHHHhHHHHHHHhhhhhhhhccCCcch-hhHHHHHHHHHHHHhccCccccccc------------CCCCchH
Q 042701 512 SQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVM-MENVVSVAMLARRLLLEEPEMVVDK------------SEIHEHP 578 (1075)
Q Consensus 512 ~~~~~lL~s~L~si~~W~ekrL~dYH~~F~~~~~~-me~l~sl~~~~~kil~ed~~~~yi~------------~~~~~~~ 578 (1075)
... .|-.+ |-.|+|..|.+.-..|.+.-.. ++.- |- +++++.|-+ ..++.|.
T Consensus 269 dd~--~LiRi---iVsR~e~Dl~~Ik~~y~~~yg~sL~~~---------I~-~dtsGdY~~~LlaL~~~~~~~~g~~~~~ 333 (672)
T 1m9i_A 269 RDN--TLIRI---MVSRSELDMLDIREIFRTKYEKSLYSM---------IK-NDTSGEYKKTLLKLSGGDDDAAGQFFPE 333 (672)
T ss_dssp CHH--HHHHH---HHHTTTTTHHHHHHHHHHHSSSCHHHH---------HH-TTCCHHHHHHHHHHHCSCTTSSCCCCHH
T ss_pred Chh--hhhhH---hhccCHHHHHHHHHHHHHHhCCcHHHH---------HH-HhcCCcHHHHHHHHhCCccccccccCCc
Confidence 542 23333 3349999998755555432211 1111 11 111111111 1245666
Q ss_pred HHHHHHHHHHHHHhhcccCcccccccCCchhHHHHHHHHHHH---HhhHHHHHHhhhccChhhhhccCchhHHHHHHHHH
Q 042701 579 LALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLY---GNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISL 655 (1075)
Q Consensus 579 L~~LA~di~~La~~Ek~~fSPiL~~whp~a~~VAA~tLh~~y---g~dLK~~L~~v~~lt~d~~~vl~aAD~LEk~L~ql 655 (1075)
++.++--+-.....-.-.+.|.+....+.-+..-|..|+..+ |.|=+..++=+.+.++...+.+..+
T Consensus 334 ~a~~~~~~~~~~~~~~~~~~~ti~~~~~f~~~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~~~---------- 403 (672)
T 1m9i_A 334 AAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQT---------- 403 (672)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCSCCCCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHHTSCHHHHHHHHHH----------
T ss_pred cccccccccccccccccCCCCCcCCCCCCChHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHH----------
Confidence 666553333321111233445554433333445566666654 4455555555544444333332222
Q ss_pred hhhhcccchhhhhhccCCCccchhhHHHHHHHHHHHhhhhHHHHHHHHHhc
Q 042701 656 ITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQ 706 (1075)
Q Consensus 656 ~~sv~~~dg~k~~vr~~~PfelE~~f~~~V~~Wi~e~~~k~~ewV~rAie~ 706 (1075)
|.+.. |+.++..+. -++.+.|...|..|+....+.-..|++.|++.
T Consensus 404 Y~~~~----gkdL~~~Lk-selsG~fe~~i~~l~~~p~~~DA~~l~~A~kg 449 (672)
T 1m9i_A 404 FKSHF----GRDLMTDLK-SEISGDLARLILGLMMPPAHYDAKQLKKAMEG 449 (672)
T ss_dssp HHHHH----SSCHHHHHH-HHCCTHHHHHHHHHHSCHHHHHHHHHHHHHSS
T ss_pred HHHHh----CchHHHHHH-HHcCCCHHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence 22211 122222211 14567899999999999999999999999985
No 8
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=28.39 E-value=91 Score=34.36 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=56.1
Q ss_pred ccHHHHHHHHhhhccccCCccchHHHHHHHHHHhhh----------------ccccc-----cchhHHHHHHHHHhhhhh
Q 042701 408 LNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKST----------------WRVLG-----ITETMHYTCYALVLFRQY 466 (1075)
Q Consensus 408 lNv~LY~~LL~~~FD~~de~~v~eEvdElleliK~T----------------W~~LG-----I~q~~Hn~cf~WvLF~qy 466 (1075)
.|.++.+.||. .+.+..+..+.+-++++++.+... |..++ ...+=||+--+|.|++-+
T Consensus 173 ~~~~~~~all~-l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~ 251 (388)
T 2gz6_A 173 VPMILANLTLE-MEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIA 251 (388)
T ss_dssp HHHHHHHHHHH-TGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHH
Confidence 45666666555 566666677888888998888543 32211 123569999999999999
Q ss_pred hccCchhHHHHHHHHhhhc
Q 042701 467 VITSEQGMLQHAIDQLKKI 485 (1075)
Q Consensus 467 v~Tge~~Ll~~a~~~l~~v 485 (1075)
.+||++.++..|...+...
T Consensus 252 ~~tgd~~~~~~A~~~~~~~ 270 (388)
T 2gz6_A 252 RRKNDSKTINQAVDVVLNI 270 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 9999999999887776654
No 9
>2z84_A UFSP1, UFM1-specific protease 1; alpha/beta, papain like fold, hydrolase, thiol protease, UBL conjugation pathway; 1.70A {Mus musculus}
Probab=25.77 E-value=42 Score=35.55 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=34.6
Q ss_pred ccchhHHHhhhhcCCCCCcccC---------------CCCcceEEEeeCCCCCCC
Q 042701 64 MLELSEAIRDFHDHTDLPQMNN---------------GGSADEFFLVTNPQSSGS 103 (1075)
Q Consensus 64 ~~~~~~a~~~~~~~~~~p~~~~---------------~~~~~~~~l~~~p~~~~~ 103 (1075)
.-.+-+.+.+||....-|+|+. ..+++.+|||-||-..|.
T Consensus 122 ~~~~~~~l~~hF~~~g~PI~igG~~~ghS~tIvGve~~~~g~~~lLIlDPhy~~~ 176 (218)
T 2z84_A 122 LRGEEERLYSHFTTGGGPVMVGGDADAQSKALLGICEGPGSEVYVLILDPHYWGT 176 (218)
T ss_dssp TTTCHHHHHHHHHTTCCCEEECCTTTSCCEEEEEEEECTTCCEEEEEECCCCCSC
T ss_pred HHHHHHHHHHHHhcCCCCEEECCCcccccceEEeEEecCCCcEEEEEECCCcCCc
Confidence 4567889999999999999998 345788999999999985
No 10
>2p06_A Hypothetical protein AF_0060; MCSG, PSI2, MAD, structural genomics, singleton, predicted C region AF_0060; 2.10A {Archaeoglobus fulgidus dsm 4304} SCOP: a.204.1.3
Probab=23.02 E-value=21 Score=32.34 Aligned_cols=66 Identities=27% Similarity=0.445 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCCCcccccCCCcccHHHHHHHHhhhccccCCccchHHHHHHHHHHhhh-ccccccch-h
Q 042701 375 CLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKST-WRVLGITE-T 452 (1075)
Q Consensus 375 ~m~~l~~~~~~La~r~~~~~~~~e~chWadgyplNv~LY~~LL~~~FD~~de~~v~eEvdElleliK~T-W~~LGI~q-~ 452 (1075)
.+|.+..-.|+--+||++- + -.|-|=- -+.||.-+| ||+||+-|.+.|. |--|-=.- .
T Consensus 31 flremhakymkrvsrpgnt--p---rpwfdfs------eerllsrlf---------eemdelreavekedwenlrdelld 90 (114)
T 2p06_A 31 FLREMHAKYMKRVSRPGNT--P---RPWFDFS------EERLLSRLF---------EEMDELREAVEKEDWENLRDELLD 90 (114)
T ss_dssp HHHHHHHHHHHHHTSTTCC--S---CHHHHSC------HHHHHHHHH---------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCC--C---CCccccc------HHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666677778887542 2 2353211 234454444 6999999999554 98764322 4
Q ss_pred HHHHH-HHH
Q 042701 453 MHYTC-YAL 460 (1075)
Q Consensus 453 ~Hn~c-f~W 460 (1075)
+.|.| |.|
T Consensus 91 vanfcmylw 99 (114)
T 2p06_A 91 VANFCMYLW 99 (114)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 56666 445
No 11
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=20.72 E-value=88 Score=34.85 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=53.8
Q ss_pred HHHHHHHHhh--hccccCCccchHHHHHHHHHHhhh---------------cccc----c-cchhHHHHHHHHHhhhhhh
Q 042701 410 VRLYEKLLLS--VFDVLDEGKLTEEVEEILELLKST---------------WRVL----G-ITETMHYTCYALVLFRQYV 467 (1075)
Q Consensus 410 v~LY~~LL~~--~FD~~de~~v~eEvdElleliK~T---------------W~~L----G-I~q~~Hn~cf~WvLF~qyv 467 (1075)
.++.+.++.. .+.+.+++ ..+.++++++.+... |..+ | +..+=|++-.+|.|.+-+.
T Consensus 183 m~~~~~~l~l~~l~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~ 261 (402)
T 1fp3_A 183 MMLLCLVEQLGEEDEELAGR-YAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSS 261 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-THHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHhCcCCCeEEEEECCCCCccCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 4677766663 55655555 678888988888443 3111 1 1346788889999999999
Q ss_pred ccCchhHHHHHHHHhhhc
Q 042701 468 ITSEQGMLQHAIDQLKKI 485 (1075)
Q Consensus 468 ~Tge~~Ll~~a~~~l~~v 485 (1075)
++|++.++..|.....-+
T Consensus 262 ~~~~~~~l~~A~~~~~~~ 279 (402)
T 1fp3_A 262 RSGDAKLRAHVIDTFLLL 279 (402)
T ss_dssp HTTCHHHHHHHHHHHTHH
T ss_pred HcCChHHHHHHHHHHHHH
Confidence 999999999988776555
Done!