BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042702
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Query: 2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
++A RL+ G L ECWN L +LKSC+NEIV+FFLN + +G CC ++DIIT NCW AML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 62 TSLGFTAEEGNILRGYC------DASSAPS 85
TSLGFT EE N+LRG+C D+S APS
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
++A RL G L ECWN L +LKSC+NEIV+FFLN + +G DCC +++IT +CW AML
Sbjct: 33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91
Query: 62 TSLGFTAEEGNILRGYCDA 80
TSLGFT++E N+LRG+C +
Sbjct: 92 TSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 4/87 (4%)
Query: 2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
++A RL G L +CW+ L +LKSC+NEIV+FFLN + +G CC+ +D+IT +CW AML
Sbjct: 33 NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91
Query: 62 TSLGFTAEEGNILRGYCDASSAPSLGG 88
TSLGFT EE N+LRG+C +P+ GG
Sbjct: 92 TSLGFTLEETNVLRGFCQ---SPNSGG 115
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 3 LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLT 62
L RL++ D CW+ LM+L+ CS E+++FFLN + IGP CC I I R CW M+
Sbjct: 44 LVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIG 103
Query: 63 SLGFTAEEGNILRGYCDASSAPSLG 87
LGFTA+EG++L+GYCD + + + G
Sbjct: 104 VLGFTAQEGDMLQGYCDGNDSDNNG 128
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 3 LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNR--------QADIGPDCCHTIDIITR 54
+AT G+L +CWN ++LKSC++EIV FFL++ + I DCC I ++ +
Sbjct: 40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99
Query: 55 NCWLAMLTSLGFTAEEGNILRGYCD 79
+CW M TSLG T EGN LR YC+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE 124
>sp|Q92LA1|LEUD_RHIME 3-isopropylmalate dehydratase small subunit OS=Rhizobium meliloti
(strain 1021) GN=leuD PE=3 SV=1
Length = 201
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 27 SNEIVIFFLNRQADIGPDCCH---TIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSA 83
SN I+ L Q GPD +D R+C L L +G T E+G + Y A++A
Sbjct: 137 SNAILTVDLEAQEITGPDGGSIKFEVDAFKRHCLLNGLDDIGLTLEKGGSIDNYEKATAA 196
>sp|B9JV26|LEUD_AGRVS 3-isopropylmalate dehydratase small subunit OS=Agrobacterium vitis
(strain S4 / ATCC BAA-846) GN=leuD PE=3 SV=1
Length = 201
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 27 SNEIVIFFLNRQADIGPD---CCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSA 83
SN +V L Q GPD ID R+C L L +G T E+ + + + A++A
Sbjct: 137 SNAVVTVDLETQEITGPDGGSISFEIDEFKRHCMLNGLDDIGLTMEKSSAIASFETANAA 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,081,360
Number of Sequences: 539616
Number of extensions: 1338301
Number of successful extensions: 2998
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2992
Number of HSP's gapped (non-prelim): 7
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)