Your job contains 1 sequence.
>042704
MATTAVFDEYQCDIYQPEDDDLIQSTHDHEAIFSLHLFSATPNIMNKNLIVLQQDLLGGC
AYWSANLSRCLSALNVAFHAHPSIIYKITSYAHSAANEYHNMGSGIIPLVVIIKAANVSY
DINEEAAAIDEAVTRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQ
DCLVNWLKNSSLCPLCRFQLS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042704
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716857 - symbol:AT5G08139 species:3702 "Ar... 148 8.5e-12 2
UNIPROTKB|C9J1C6 - symbol:RNF181 "E3 ubiquitin-protein li... 133 9.3e-12 2
UNIPROTKB|Q9P0P0 - symbol:RNF181 "E3 ubiquitin-protein li... 133 9.3e-12 2
UNIPROTKB|F1SVB7 - symbol:RNF181 "Uncharacterized protein... 128 1.2e-11 2
TAIR|locus:2093252 - symbol:AT3G15740 species:3702 "Arabi... 155 2.8e-11 1
ZFIN|ZDB-GENE-040426-1024 - symbol:rnf181 "ring finger pr... 127 3.9e-11 2
TAIR|locus:2101447 - symbol:AT3G60080 species:3702 "Arabi... 157 4.7e-11 1
RGD|1359698 - symbol:Rnf181 "ring finger protein 181" spe... 126 6.3e-11 2
UNIPROTKB|Q6AXU4 - symbol:Rnf181 "E3 ubiquitin-protein li... 126 6.3e-11 2
TAIR|locus:2092231 - symbol:AT3G19950 species:3702 "Arabi... 155 9.7e-11 1
TAIR|locus:2050522 - symbol:AT2G44330 species:3702 "Arabi... 147 2.0e-10 1
TAIR|locus:2034934 - symbol:AT1G18770 species:3702 "Arabi... 146 2.5e-10 1
TAIR|locus:4515102991 - symbol:AT2G44581 "AT2G44581" spec... 146 2.5e-10 1
TAIR|locus:2151241 - symbol:SGR9 "SHOOT GRAVITROPISM 9" s... 149 2.9e-10 1
TAIR|locus:1006230278 - symbol:AT3G10815 species:3702 "Ar... 143 5.2e-10 1
MGI|MGI:1913760 - symbol:Rnf181 "ring finger protein 181"... 120 6.2e-10 2
TAIR|locus:2058465 - symbol:RHC1A "RING-H2 finger C1A" sp... 147 7.5e-10 1
TAIR|locus:4010713708 - symbol:AT2G44578 "AT2G44578" spec... 141 8.4e-10 1
TAIR|locus:2148318 - symbol:RDUF2 "RING and Domain of Unk... 148 9.5e-10 1
FB|FBgn0038627 - symbol:CG7694 species:7227 "Drosophila m... 140 1.1e-09 1
TAIR|locus:2053791 - symbol:AT2G42360 species:3702 "Arabi... 141 1.1e-09 1
TAIR|locus:2075175 - symbol:RDUF1 "RING and Domain of Unk... 147 1.1e-09 1
TAIR|locus:2160215 - symbol:AT5G54990 species:3702 "Arabi... 140 1.2e-09 1
TAIR|locus:2195573 - symbol:AT1G60360 species:3702 "Arabi... 144 1.6e-09 1
TAIR|locus:2139044 - symbol:AT4G12190 species:3702 "Arabi... 138 1.8e-09 1
UNIPROTKB|F1S053 - symbol:RNF111 "Uncharacterized protein... 140 2.3e-09 2
TAIR|locus:2177684 - symbol:CIP8 "COP1-interacting protei... 142 2.8e-09 1
TAIR|locus:2093335 - symbol:AT3G30460 species:3702 "Arabi... 136 2.9e-09 1
TAIR|locus:2193874 - symbol:AT1G55530 species:3702 "Arabi... 142 3.1e-09 1
TAIR|locus:1009023242 - symbol:AT3G60966 "AT3G60966" spec... 135 3.6e-09 1
TAIR|locus:2161058 - symbol:ATCRT1 species:3702 "Arabidop... 142 4.0e-09 1
TAIR|locus:2115924 - symbol:AT4G05350 species:3702 "Arabi... 137 4.0e-09 1
TAIR|locus:2131463 - symbol:AT4G26400 species:3702 "Arabi... 141 4.2e-09 1
TAIR|locus:2034924 - symbol:AT1G18780 species:3702 "Arabi... 140 4.4e-09 1
TAIR|locus:2063912 - symbol:RHC2A "RING-H2 finger C2A" sp... 141 5.3e-09 1
TAIR|locus:2102569 - symbol:RZF1 "AT3G56580" species:3702... 139 5.4e-09 1
TAIR|locus:2035843 - symbol:AT1G14200 species:3702 "Arabi... 133 5.9e-09 1
TAIR|locus:2139074 - symbol:AT4G12210 species:3702 "Arabi... 136 6.2e-09 1
TAIR|locus:2200301 - symbol:AT1G68070 species:3702 "Arabi... 138 8.2e-09 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 131 9.7e-09 1
TAIR|locus:2086380 - symbol:AT3G14970 species:3702 "Arabi... 136 1.2e-08 1
UNIPROTKB|Q3T0W3 - symbol:RNF181 "E3 ubiquitin-protein li... 130 1.2e-08 1
UNIPROTKB|E2QUN1 - symbol:RNF181 "Uncharacterized protein... 130 1.2e-08 1
TAIR|locus:2118056 - symbol:AT4G12140 species:3702 "Arabi... 135 1.2e-08 1
ZFIN|ZDB-GENE-080303-32 - symbol:zgc:175214 "zgc:175214" ... 129 1.6e-08 1
DICTYBASE|DDB_G0271294 - symbol:DDB_G0271294 species:4468... 128 2.0e-08 1
UNIPROTKB|G3MWN3 - symbol:G3MWN3 "Uncharacterized protein... 128 2.0e-08 1
TAIR|locus:2037683 - symbol:RHA2A "RING-H2 finger A2A" sp... 128 2.0e-08 1
UNIPROTKB|F1P2A5 - symbol:RNF111 "Uncharacterized protein... 140 2.2e-08 1
TAIR|locus:2145086 - symbol:AT5G52140 species:3702 "Arabi... 131 2.3e-08 2
ZFIN|ZDB-GENE-091118-64 - symbol:rnf165a "ring finger pro... 137 2.5e-08 1
UNIPROTKB|E1BSQ8 - symbol:RNF111 "Uncharacterized protein... 140 2.5e-08 1
UNIPROTKB|E2R7H1 - symbol:RNF111 "Uncharacterized protein... 140 2.6e-08 1
TAIR|locus:2122348 - symbol:AT4G09100 species:3702 "Arabi... 127 2.6e-08 1
UNIPROTKB|Q5R476 - symbol:RNF111 "E3 ubiquitin-protein li... 140 2.6e-08 1
RGD|1310097 - symbol:Rnf111 "ring finger protein 111" spe... 140 2.6e-08 1
MGI|MGI:1934919 - symbol:Rnf111 "ring finger 111" species... 140 2.6e-08 1
UNIPROTKB|A6QLE0 - symbol:RNF111 "Uncharacterized protein... 140 2.6e-08 1
UNIPROTKB|Q6ZNA4 - symbol:RNF111 "E3 ubiquitin-protein li... 140 2.6e-08 1
TAIR|locus:2034939 - symbol:AT1G18760 species:3702 "Arabi... 135 2.7e-08 1
UNIPROTKB|F1RPS5 - symbol:RNF165 "Uncharacterized protein... 137 2.8e-08 1
UNIPROTKB|I3LPH2 - symbol:RNF165 "Uncharacterized protein... 137 2.9e-08 1
UNIPROTKB|Q6ZSG1 - symbol:RNF165 "RING finger protein 165... 137 3.2e-08 1
UNIPROTKB|F1PHU2 - symbol:RNF165 "Uncharacterized protein... 137 3.2e-08 1
MGI|MGI:2444521 - symbol:Rnf165 "ring finger protein 165"... 137 3.2e-08 1
RGD|1560744 - symbol:Rnf165 "ring finger protein 165" spe... 137 3.3e-08 1
ZFIN|ZDB-GENE-030616-560 - symbol:si:dkey-51a16.9 "si:dke... 126 3.3e-08 1
TAIR|locus:2200610 - symbol:AT1G26800 species:3702 "Arabi... 133 3.3e-08 1
UNIPROTKB|F1MJP2 - symbol:RNF165 "Uncharacterized protein... 137 3.3e-08 1
TAIR|locus:2038766 - symbol:RHA2B "RING-H2 finger protein... 125 4.2e-08 1
TAIR|locus:2159320 - symbol:AT5G60820 species:3702 "Arabi... 137 4.7e-08 1
TAIR|locus:2206540 - symbol:AT1G57730 species:3702 "Arabi... 126 5.3e-08 1
TAIR|locus:2177886 - symbol:AT5G41450 species:3702 "Arabi... 124 5.3e-08 1
ZFIN|ZDB-GENE-041114-40 - symbol:rnf24 "ring finger prote... 123 6.8e-08 1
ZFIN|ZDB-GENE-091204-454 - symbol:si:ch1073-392o20.1 "si:... 123 6.8e-08 1
TAIR|locus:2177866 - symbol:AT5G41430 species:3702 "Arabi... 122 8.7e-08 1
TAIR|locus:2060699 - symbol:AT2G29840 species:3702 "Arabi... 134 1.1e-07 1
GENEDB_PFALCIPARUM|PF14_0215 - symbol:PF14_0215 "hypothet... 136 1.1e-07 1
UNIPROTKB|Q8ILM8 - symbol:PF14_0215 "Putative uncharacter... 136 1.1e-07 1
TAIR|locus:2090980 - symbol:AT3G14320 species:3702 "Arabi... 130 1.2e-07 1
TAIR|locus:1006230652 - symbol:AT5G07225 species:3702 "Ar... 132 1.3e-07 1
TAIR|locus:2092895 - symbol:AT3G13430 species:3702 "Arabi... 134 1.3e-07 1
UNIPROTKB|F1NJF6 - symbol:RNF122 "Uncharacterized protein... 120 1.4e-07 1
UNIPROTKB|F1Q2J1 - symbol:RNF122 "Uncharacterized protein... 120 1.4e-07 1
UNIPROTKB|Q9H9V4 - symbol:RNF122 "RING finger protein 122... 120 1.4e-07 1
MGI|MGI:1916117 - symbol:Rnf122 "ring finger protein 122"... 120 1.4e-07 1
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 120 1.4e-07 1
TAIR|locus:2165735 - symbol:AT5G42200 species:3702 "Arabi... 120 1.4e-07 1
TAIR|locus:2199272 - symbol:AT1G68180 species:3702 "Arabi... 132 1.6e-07 1
MGI|MGI:1261771 - symbol:Rnf24 "ring finger protein 24" s... 119 1.8e-07 1
RGD|1309384 - symbol:Rnf24 "ring finger protein 24" speci... 119 1.8e-07 1
UNIPROTKB|Q32LD0 - symbol:RNF24 "Ring finger protein 24" ... 118 2.3e-07 1
UNIPROTKB|E2R402 - symbol:RNF24 "Uncharacterized protein"... 118 2.3e-07 1
UNIPROTKB|Q9Y225 - symbol:RNF24 "RING finger protein 24" ... 118 2.3e-07 1
DICTYBASE|DDB_G0280089 - symbol:DDB_G0280089 "RING zinc f... 134 2.7e-07 1
TAIR|locus:2053583 - symbol:AT2G15580 species:3702 "Arabi... 127 2.8e-07 1
UNIPROTKB|F1RX76 - symbol:RNF122 "Uncharacterized protein... 117 2.9e-07 1
ZFIN|ZDB-GENE-070209-292 - symbol:rnf126 "ring finger pro... 132 3.0e-07 1
TAIR|locus:2074567 - symbol:AT3G02340 species:3702 "Arabi... 133 3.3e-07 1
ZFIN|ZDB-GENE-050913-69 - symbol:rnf11b "ring finger prot... 116 3.8e-07 1
WARNING: Descriptions of 346 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:1005716857 [details] [associations]
symbol:AT5G08139 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AK117658 EMBL:AK221247 EMBL:AK220636 IPI:IPI00534815
RefSeq:NP_850790.1 UniGene:At.5451 UniGene:At.66679
ProteinModelPortal:Q8GYG0 SMR:Q8GYG0 EnsemblPlants:AT5G08139.1
GeneID:830709 KEGG:ath:AT5G08139 TAIR:At5g08139 eggNOG:NOG318722
InParanoid:Q8GYG0 OMA:CKDEMNI PhylomeDB:Q8GYG0
ProtClustDB:CLSN2918077 Genevestigator:Q8GYG0 Uniprot:Q8GYG0
Length = 376
Score = 148 (57.2 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C + M G+KA ++PC+H YH +C+V WLK + CP+CR++L
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYEL 353
Score = 38 (18.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 11 QCDIYQPEDDDLIQSTHDHEA 31
Q + P DD I D+EA
Sbjct: 11 QSQVTPPHDDSNIHGDFDNEA 31
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 133 (51.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E A MPC H++H C++ WL ++ CPLCR++L
Sbjct: 76 CPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYEL 120
Score = 39 (18.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 7 FDEYQCDIYQPEDD 20
FDE+ C+ PE +
Sbjct: 5 FDEHDCEPSDPEQE 18
>UNIPROTKB|Q9P0P0 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC016753 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN EMBL:AF151072
EMBL:CR457165 EMBL:AK222700 EMBL:BC002803 IPI:IPI00292354
RefSeq:NP_057578.1 UniGene:Hs.356187 ProteinModelPortal:Q9P0P0
SMR:Q9P0P0 IntAct:Q9P0P0 STRING:Q9P0P0 PhosphoSite:Q9P0P0
DMDM:74761852 PaxDb:Q9P0P0 PRIDE:Q9P0P0 DNASU:51255
Ensembl:ENST00000306368 GeneID:51255 KEGG:hsa:51255 UCSC:uc002spv.1
GeneCards:GC02P085822 HGNC:HGNC:28037 HPA:HPA046112 MIM:612490
neXtProt:NX_Q9P0P0 PharmGKB:PA162401586 InParanoid:Q9P0P0
PhylomeDB:Q9P0P0 GenomeRNAi:51255 NextBio:54406 ArrayExpress:Q9P0P0
Bgee:Q9P0P0 CleanEx:HS_RNF181 Genevestigator:Q9P0P0 Uniprot:Q9P0P0
Length = 153
Score = 133 (51.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E A MPC H++H C++ WL ++ CPLCR++L
Sbjct: 76 CPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYEL 120
Score = 39 (18.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 7 FDEYQCDIYQPEDD 20
FDE+ C+ PE +
Sbjct: 5 FDEHDCEPSDPEQE 18
>UNIPROTKB|F1SVB7 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN EMBL:FP325280
EMBL:CU928286 RefSeq:NP_001230307.1 RefSeq:XP_003124989.1
UniGene:Ssc.18173 Ensembl:ENSSSCT00000009015
Ensembl:ENSSSCT00000028874 GeneID:100518605 GeneID:100628060
KEGG:ssc:100518605 KEGG:ssc:100628060 Uniprot:F1SVB7
Length = 153
Score = 128 (50.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E A MPC H++H C++ WL ++ CPLCR +L
Sbjct: 76 CPVCLLEFEEEETAIEMPCHHLFHSGCILPWLSKTNSCPLCRHEL 120
Score = 43 (20.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 7 FDEYQCDIYQPEDD 20
FDE+ C+ PE D
Sbjct: 5 FDEHDCEPLDPEPD 18
>TAIR|locus:2093252 [details] [associations]
symbol:AT3G15740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB017071
HOGENOM:HOG000153041 ProtClustDB:CLSN2685086 IPI:IPI00531781
RefSeq:NP_188195.1 UniGene:At.64999 ProteinModelPortal:Q9LW05
SMR:Q9LW05 EnsemblPlants:AT3G15740.1 GeneID:820817
KEGG:ath:AT3G15740 TAIR:At3g15740 eggNOG:NOG289084
InParanoid:Q9LW05 OMA:EQTHEFD PhylomeDB:Q9LW05
Genevestigator:Q9LW05 Uniprot:Q9LW05
Length = 224
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 152 SQQYCVICLEVMKEGS--KAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
++ YCVIC++ ++ GS +A RMPCSH++H+ C WL+NS +CP+CR
Sbjct: 172 NEGYCVICMDNIRVGSDVEAGRMPCSHVFHRTCGEEWLRNSGICPVCR 219
>ZFIN|ZDB-GENE-040426-1024 [details] [associations]
symbol:rnf181 "ring finger protein 181"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1024 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
GeneTree:ENSGT00530000062967 CTD:51255 HOGENOM:HOG000031081
HOVERGEN:HBG108412 OMA:EEQYRQN OrthoDB:EOG40VVQW EMBL:CU041374
EMBL:BC050161 IPI:IPI00492404 IPI:IPI00890554 RefSeq:NP_956600.1
UniGene:Dr.84789 ProteinModelPortal:Q7ZW78 STRING:Q7ZW78
Ensembl:ENSDART00000029450 Ensembl:ENSDART00000134728
Ensembl:ENSDART00000140392 GeneID:393276 KEGG:dre:393276
InParanoid:Q7ZW78 NextBio:20814333 Bgee:Q7ZW78 Uniprot:Q7ZW78
Length = 156
Score = 127 (49.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSL 192
V +S+ ++ A +G C +CL +E MPC H++H C++ WL ++
Sbjct: 59 VVQSLPVVIISPEQADKGVK---CPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNS 115
Query: 193 CPLCRFQL 200
CPLCR +L
Sbjct: 116 CPLCRLEL 123
Score = 39 (18.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 7 FDEYQCDIYQPED 19
FDE+ C+ PE+
Sbjct: 5 FDEHDCEPTNPEE 17
>TAIR|locus:2101447 [details] [associations]
symbol:AT3G60080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL138658 EMBL:BT020239 EMBL:BT020570 EMBL:AK229330
IPI:IPI00527822 PIR:T47832 RefSeq:NP_191567.1 UniGene:At.34507
ProteinModelPortal:Q9M1D5 SMR:Q9M1D5 PRIDE:Q9M1D5
EnsemblPlants:AT3G60080.1 GeneID:825178 KEGG:ath:AT3G60080
TAIR:At3g60080 eggNOG:NOG323832 HOGENOM:HOG000153215
InParanoid:Q9M1D5 OMA:EPERRTY PhylomeDB:Q9M1D5
ProtClustDB:CLSN2685030 Genevestigator:Q9M1D5 Uniprot:Q9M1D5
Length = 306
Score = 157 (60.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C E G A R+PCSHIYH DC+V WL + + CPLCRF+L
Sbjct: 169 CAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFEL 213
>RGD|1359698 [details] [associations]
symbol:Rnf181 "ring finger protein 181" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1359698
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN
OrthoDB:EOG40VVQW EMBL:BC079313 IPI:IPI00191490
RefSeq:NP_001007648.1 UniGene:Rn.94883 ProteinModelPortal:Q6AXU4
PRIDE:Q6AXU4 Ensembl:ENSRNOT00000016699 GeneID:297337
KEGG:rno:297337 UCSC:RGD:1359698 InParanoid:Q6AXU4 NextBio:642113
ArrayExpress:Q6AXU4 Genevestigator:Q6AXU4 Uniprot:Q6AXU4
Length = 165
Score = 126 (49.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E MPC H++H +C++ WL ++ CPLCR +L
Sbjct: 88 CPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132
Score = 38 (18.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 7 FDEYQCDIYQPE 18
FDE+ C+ PE
Sbjct: 5 FDEHDCEPLNPE 16
>UNIPROTKB|Q6AXU4 [details] [associations]
symbol:Rnf181 "E3 ubiquitin-protein ligase RNF181"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1359698 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN
OrthoDB:EOG40VVQW EMBL:BC079313 IPI:IPI00191490
RefSeq:NP_001007648.1 UniGene:Rn.94883 ProteinModelPortal:Q6AXU4
PRIDE:Q6AXU4 Ensembl:ENSRNOT00000016699 GeneID:297337
KEGG:rno:297337 UCSC:RGD:1359698 InParanoid:Q6AXU4 NextBio:642113
ArrayExpress:Q6AXU4 Genevestigator:Q6AXU4 Uniprot:Q6AXU4
Length = 165
Score = 126 (49.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E MPC H++H +C++ WL ++ CPLCR +L
Sbjct: 88 CPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132
Score = 38 (18.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 7 FDEYQCDIYQPE 18
FDE+ C+ PE
Sbjct: 5 FDEHDCEPLNPE 16
>TAIR|locus:2092231 [details] [associations]
symbol:AT3G19950 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AB025631 eggNOG:NOG235630 EMBL:AY095995
EMBL:BT000583 EMBL:AK118283 IPI:IPI00518387 RefSeq:NP_188629.1
UniGene:At.20941 ProteinModelPortal:Q8LPN7 SMR:Q8LPN7 IntAct:Q8LPN7
STRING:Q8LPN7 PaxDb:Q8LPN7 PRIDE:Q8LPN7 EnsemblPlants:AT3G19950.1
GeneID:821533 KEGG:ath:AT3G19950 TAIR:At3g19950
HOGENOM:HOG000237766 InParanoid:Q9LT14 OMA:CSNGFVE PhylomeDB:Q8LPN7
ProtClustDB:CLSN2719206 Genevestigator:Q8LPN7 Uniprot:Q8LPN7
Length = 328
Score = 155 (59.6 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C++ ++GS +MPC H++HQDCL+ WL+ + CP+CRF+L
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260
>TAIR|locus:2050522 [details] [associations]
symbol:AT2G44330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AC004521 EMBL:AY074627 EMBL:DQ086854
IPI:IPI00534529 PIR:T02388 RefSeq:NP_181961.1 UniGene:At.28780
ProteinModelPortal:O64867 SMR:O64867 EnsemblPlants:AT2G44330.1
GeneID:819040 KEGG:ath:AT2G44330 TAIR:At2g44330 eggNOG:NOG328670
HOGENOM:HOG000115003 InParanoid:O64867 OMA:QTYWCHE PhylomeDB:O64867
ProtClustDB:CLSN2912974 ArrayExpress:O64867 Genevestigator:O64867
Uniprot:O64867
Length = 180
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 134 TRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLC 193
T I++ +L A + + S C IC E G A R+PC+H+YH DC++ WL + + C
Sbjct: 76 TIKISSSMLSSASSDD--SALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSC 133
Query: 194 PLCRFQL 200
PLCR +L
Sbjct: 134 PLCRVEL 140
>TAIR|locus:2034934 [details] [associations]
symbol:AT1G18770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC011809
eggNOG:NOG268870 IPI:IPI00542029 RefSeq:NP_173312.1
UniGene:At.51668 ProteinModelPortal:Q3ED97 SMR:Q3ED97
EnsemblPlants:AT1G18770.1 GeneID:838459 KEGG:ath:AT1G18770
TAIR:At1g18770 HOGENOM:HOG000131773 InParanoid:Q3ED97 OMA:NAKIDGY
PhylomeDB:Q3ED97 ProtClustDB:CLSN2914190 Genevestigator:Q3ED97
Uniprot:Q3ED97
Length = 106
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSL 192
V +S+ ++ K+ + G + C+ICLE EG + +PC H + +C++ W + +
Sbjct: 39 VVKSLARKIYKMTTSSTG---EMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHS 95
Query: 193 CPLCRFQL 200
CPLCRF+L
Sbjct: 96 CPLCRFKL 103
>TAIR|locus:4515102991 [details] [associations]
symbol:AT2G44581 "AT2G44581" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG329235
HOGENOM:HOG000015208 ProtClustDB:CLSN2681377 IPI:IPI00891754
RefSeq:NP_001118526.1 UniGene:At.73710 ProteinModelPortal:B3H6J7
SMR:B3H6J7 EnsemblPlants:AT2G44581.1 GeneID:6241397
KEGG:ath:AT2G44581 TAIR:At2g44581 OMA:ATEGEKM PhylomeDB:B3H6J7
Genevestigator:B3H6J7 Uniprot:B3H6J7
Length = 145
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 147 AIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQL 200
A E S YC ICLE EG K R+ CSH +H DC+ WL+ S+CPLCR ++
Sbjct: 61 AEEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>TAIR|locus:2151241 [details] [associations]
symbol:SGR9 "SHOOT GRAVITROPISM 9" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009501 "amyloplast" evidence=IDA] [GO:0009630
"gravitropism" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0009630
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 HSSP:P38398
GO:GO:0009501 EMBL:BT005552 EMBL:AK118262 IPI:IPI00519960
RefSeq:NP_195895.2 UniGene:At.33371 ProteinModelPortal:Q8GXF8
SMR:Q8GXF8 EnsemblPlants:AT5G02750.1 GeneID:831806
KEGG:ath:AT5G02750 TAIR:At5g02750 eggNOG:NOG310232
HOGENOM:HOG000084017 InParanoid:Q8GXF8 OMA:LARRNTC PhylomeDB:Q8GXF8
ProtClustDB:CLSN2690743 Genevestigator:Q8GXF8 Uniprot:Q8GXF8
Length = 283
Score = 149 (57.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 24/54 (44%), Positives = 29/54 (53%)
Query: 147 AIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
A + CVIC E M EG MPC H +H C++ WL + CP CRFQL
Sbjct: 205 AASNAGEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQL 258
>TAIR|locus:1006230278 [details] [associations]
symbol:AT3G10815 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY139990
EMBL:BT002592 IPI:IPI00537743 RefSeq:NP_974274.1 UniGene:At.63149
ProteinModelPortal:Q8L729 SMR:Q8L729 PRIDE:Q8L729
EnsemblPlants:AT3G10815.1 GeneID:2745878 KEGG:ath:AT3G10815
TAIR:At3g10815 InParanoid:Q8L729 OMA:MESVWCH PhylomeDB:Q8L729
Genevestigator:Q8L729 Uniprot:Q8L729
Length = 199
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 136 SINT-QVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
+IN+ Q +K+ G YC +C + + GS A +MPC HIYH +C++ WL + CP
Sbjct: 101 AINSLQKIKIRQKHLGLDP-YCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCP 159
Query: 195 LCRFQL 200
+CR +L
Sbjct: 160 VCRKEL 165
>MGI|MGI:1913760 [details] [associations]
symbol:Rnf181 "ring finger protein 181" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1913760
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OrthoDB:EOG40VVQW
EMBL:AK010854 EMBL:AK014094 EMBL:AK159788 EMBL:AK166904
EMBL:AK166995 EMBL:AK167396 EMBL:AK167633 EMBL:AK167935
EMBL:AK168670 EMBL:AK018849 EMBL:BC005559 EMBL:BC083119
IPI:IPI00407342 IPI:IPI00407398 IPI:IPI00855069 RefSeq:NP_079883.3
UniGene:Mm.170023 UniGene:Mm.489598 ProteinModelPortal:Q9CY62
SMR:Q9CY62 PhosphoSite:Q9CY62 PaxDb:Q9CY62 PRIDE:Q9CY62
Ensembl:ENSMUST00000069580 Ensembl:ENSMUST00000069595 GeneID:66510
KEGG:mmu:66510 UCSC:uc009cii.1 UCSC:uc009cij.1 UCSC:uc009cik.1
ChiTaRS:RNF181 NextBio:321900 Bgee:Q9CY62 CleanEx:MM_RNF181
Genevestigator:Q9CY62 Uniprot:Q9CY62
Length = 165
Score = 120 (47.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL + MPC H++H +C++ WL ++ CPLCR +L
Sbjct: 88 CPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132
Score = 38 (18.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 7 FDEYQCDIYQPE 18
FDE+ C+ PE
Sbjct: 5 FDEHDCEPLNPE 16
>TAIR|locus:2058465 [details] [associations]
symbol:RHC1A "RING-H2 finger C1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005618 "cell wall" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005618 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC002409 eggNOG:NOG235630 KO:K11982
HOGENOM:HOG000237766 EMBL:AF079180 EMBL:AY139987 EMBL:BT008726
IPI:IPI00547663 PIR:T00747 RefSeq:NP_565942.1 RefSeq:NP_973651.1
RefSeq:NP_973652.1 UniGene:At.20405 ProteinModelPortal:O22197
SMR:O22197 PaxDb:O22197 EnsemblPlants:AT2G40830.1
EnsemblPlants:AT2G40830.2 EnsemblPlants:AT2G40830.3 GeneID:818680
KEGG:ath:AT2G40830 TAIR:At2g40830 InParanoid:O22197 OMA:IDAMPTV
PhylomeDB:O22197 ProtClustDB:CLSN2688851 ArrayExpress:O22197
Genevestigator:O22197 Uniprot:O22197
Length = 328
Score = 147 (56.8 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 142 LKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+K+A S C +C + + GS+A +MPC+HIYH DC+V WL + CP+CR +L
Sbjct: 176 IKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>TAIR|locus:4010713708 [details] [associations]
symbol:AT2G44578 "AT2G44578" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282867
IPI:IPI00846938 RefSeq:NP_001078058.1 UniGene:At.36739
UniGene:At.75339 ProteinModelPortal:A8MS73 SMR:A8MS73
EnsemblPlants:AT2G44578.1 GeneID:5007961 KEGG:ath:AT2G44578
TAIR:At2g44578 HOGENOM:HOG000015208 OMA:AEGEKMR PhylomeDB:A8MS73
ProtClustDB:CLSN2681377 Genevestigator:A8MS73 Uniprot:A8MS73
Length = 145
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 27/55 (49%), Positives = 32/55 (58%)
Query: 147 AIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQL 200
A E S YC ICLE EG K R+ CSH +H DC+ WL S CPLCR ++
Sbjct: 61 AEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEI 115
>TAIR|locus:2148318 [details] [associations]
symbol:RDUF2 "RING and Domain of Unknown Function 1117 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IMP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0009737 EMBL:CP002688
GO:GO:0046872 GO:GO:0009414 GO:GO:0008270 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 eggNOG:NOG246952 InterPro:IPR010543 Pfam:PF06547
EMBL:AY052711 EMBL:AY063719 IPI:IPI00527742 RefSeq:NP_568910.1
UniGene:At.9728 ProteinModelPortal:Q940T5 SMR:Q940T5 STRING:Q940T5
EnsemblPlants:AT5G59550.1 GeneID:836074 KEGG:ath:AT5G59550
OMA:TEVRSIN ProtClustDB:CLSN2685119 Genevestigator:Q940T5
Uniprot:Q940T5
Length = 407
Score = 148 (57.2 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
S+ C +C E+ + ++A MPC H++H DC+V WL + CP+CRF+L
Sbjct: 195 SEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 243
>FB|FBgn0038627 [details] [associations]
symbol:CG7694 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 eggNOG:NOG294567 EMBL:BT001518
RefSeq:NP_001138076.1 RefSeq:NP_650729.1 UniGene:Dm.14942
ProteinModelPortal:Q9VE61 SMR:Q9VE61 PaxDb:Q9VE61 PRIDE:Q9VE61
EnsemblMetazoa:FBtr0083632 EnsemblMetazoa:FBtr0290211 GeneID:42230
KEGG:dme:Dmel_CG7694 UCSC:CG7694-RA FlyBase:FBgn0038627
InParanoid:Q9VE61 OMA:HEFHEEC OrthoDB:EOG4DV43R PhylomeDB:Q9VE61
GenomeRNAi:42230 NextBio:827789 Uniprot:Q9VE61
Length = 147
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C E +EG K +PC H +H++C++ WLK ++ CPLCR++L
Sbjct: 70 CSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYEL 114
>TAIR|locus:2053791 [details] [associations]
symbol:AT2G42360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0015824 "proline
transport" evidence=RCA] [GO:0043090 "amino acid import"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC005956
HOGENOM:HOG000034168 ProtClustDB:CLSN2683918 EMBL:DQ086853
EMBL:AY074652 EMBL:AK228239 IPI:IPI00531118 PIR:A84853
RefSeq:NP_181765.1 UniGene:At.67220 UniGene:At.70280
UniGene:At.75048 ProteinModelPortal:Q9SLC3 SMR:Q9SLC3 PRIDE:Q9SLC3
EnsemblPlants:AT2G42360.1 GeneID:818837 KEGG:ath:AT2G42360
TAIR:At2g42360 eggNOG:NOG287277 InParanoid:Q9SLC3 OMA:PNCKHIF
PhylomeDB:Q9SLC3 Genevestigator:Q9SLC3 GermOnline:AT2G42360
Uniprot:Q9SLC3
Length = 236
Score = 141 (54.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 135 RSINTQVLKLAP-----AIEG--CSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNW 186
R +N V+ P A +G S C +CL V+KE KA +P C HI+H DC+ W
Sbjct: 80 RGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTW 139
Query: 187 LKNSSLCPLCRFQL 200
L S CP+CR ++
Sbjct: 140 LTTCSTCPVCRTEV 153
>TAIR|locus:2075175 [details] [associations]
symbol:RDUF1 "RING and Domain of Unknown Function 1117 1"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0002679 "respiratory burst involved in defense
response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0009737 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 GO:GO:0010200 EMBL:AL133314 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
eggNOG:NOG246952 HOGENOM:HOG000238692 InterPro:IPR010543
Pfam:PF06547 ProtClustDB:CLSN2685119 EMBL:AY093203 EMBL:BT008859
IPI:IPI00546844 PIR:T45599 RefSeq:NP_190246.1 UniGene:At.43000
ProteinModelPortal:Q9SNB6 SMR:Q9SNB6 STRING:Q9SNB6
EnsemblPlants:AT3G46620.1 GeneID:823815 KEGG:ath:AT3G46620
TAIR:At3g46620 InParanoid:Q9SNB6 OMA:TRERRAY PhylomeDB:Q9SNB6
ArrayExpress:Q9SNB6 Genevestigator:Q9SNB6 Uniprot:Q9SNB6
Length = 395
Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C EV + G + MPC HI+H DC+V WL + CP+CRF+L
Sbjct: 215 CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFEL 259
>TAIR|locus:2160215 [details] [associations]
symbol:AT5G54990 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AB005232 IPI:IPI00548980 RefSeq:NP_200310.1 UniGene:At.55556
ProteinModelPortal:Q9FFT1 SMR:Q9FFT1 EnsemblPlants:AT5G54990.1
GeneID:835590 KEGG:ath:AT5G54990 TAIR:At5g54990 eggNOG:NOG321518
HOGENOM:HOG000152444 InParanoid:Q9FFT1 OMA:RYISTES PhylomeDB:Q9FFT1
ProtClustDB:CLSN2916571 Genevestigator:Q9FFT1 Uniprot:Q9FFT1
Length = 226
Score = 140 (54.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C ICL + G ++PCSH++H+DC++ WLK + CP+CR
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>TAIR|locus:2195573 [details] [associations]
symbol:AT1G60360 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004473
HOGENOM:HOG000237766 IPI:IPI00547558 PIR:T02286 RefSeq:NP_176239.1
UniGene:At.66062 ProteinModelPortal:O80757 SMR:O80757 PRIDE:O80757
EnsemblPlants:AT1G60360.1 GeneID:842331 KEGG:ath:AT1G60360
TAIR:At1g60360 eggNOG:NOG277461 InParanoid:O80757 OMA:ELPCKHA
PhylomeDB:O80757 ProtClustDB:CLSN2679741 Genevestigator:O80757
Uniprot:O80757
Length = 327
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 142 LKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+K+ P C +C+E G A +PC HIYH+DC+V WL+ ++ CP+CR L
Sbjct: 210 VKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268
>TAIR|locus:2139044 [details] [associations]
symbol:AT4G12190 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546160 RefSeq:NP_192956.1 UniGene:At.65368
ProteinModelPortal:F4JQK3 SMR:F4JQK3 DNASU:826827
EnsemblPlants:AT4G12190.1 GeneID:826827 KEGG:ath:AT4G12190
OMA:PRDITRM Uniprot:F4JQK3
Length = 71
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 156 CVICLEVMKEGSKA---ARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICLE + G K RM CSH++H CL+ WLK + CPLCR +L
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>UNIPROTKB|F1S053 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:CU582792 EMBL:CU464072
Ensembl:ENSSSCT00000005070 Uniprot:F1S053
Length = 994
Score = 140 (54.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 938 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
Score = 35 (17.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 81 HPSIIYKITSYAHSAANE 98
HP I S HSA ++
Sbjct: 164 HPQAILSAKSRTHSARSQ 181
>TAIR|locus:2177684 [details] [associations]
symbol:CIP8 "COP1-interacting protein 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
EMBL:AB019236 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AF162150 EMBL:AY081279 EMBL:BT008730 IPI:IPI00526303
PIR:T51245 RefSeq:NP_201297.1 UniGene:At.75373 UniGene:At.75593
UniGene:At.7851 ProteinModelPortal:Q9SPL2 SMR:Q9SPL2 IntAct:Q9SPL2
STRING:Q9SPL2 EnsemblPlants:AT5G64920.1 GeneID:836616
KEGG:ath:AT5G64920 GeneFarm:4854 TAIR:At5g64920 eggNOG:NOG263500
HOGENOM:HOG000000691 InParanoid:Q9SPL2 OMA:DNSIEFR PhylomeDB:Q9SPL2
ProtClustDB:CLSN2686438 Genevestigator:Q9SPL2 GermOnline:AT5G64920
Uniprot:Q9SPL2
Length = 334
Score = 142 (55.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
EG C +C + M G ++PC H YH DC+V WL + CP+CRFQL
Sbjct: 250 EGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQL 301
>TAIR|locus:2093335 [details] [associations]
symbol:AT3G30460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AP000389 EMBL:BT010504 EMBL:AK175589 EMBL:AK175730
IPI:IPI00520605 RefSeq:NP_189667.1 UniGene:At.36776
ProteinModelPortal:Q9LJV5 SMR:Q9LJV5 PaxDb:Q9LJV5 PRIDE:Q9LJV5
EnsemblPlants:AT3G30460.1 GeneID:822758 KEGG:ath:AT3G30460
TAIR:At3g30460 eggNOG:NOG303537 HOGENOM:HOG000153031
InParanoid:Q9LJV5 OMA:AICREEL PhylomeDB:Q9LJV5
ProtClustDB:CLSN2915427 ArrayExpress:Q9LJV5 Genevestigator:Q9LJV5
Uniprot:Q9LJV5
Length = 147
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C IC E + + + +PC H YH++C+ NWL N + CPLCR
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCR 138
>TAIR|locus:2193874 [details] [associations]
symbol:AT1G55530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005223
eggNOG:NOG235630 HOGENOM:HOG000237766 EMBL:AY039608 EMBL:AF424578
EMBL:BT000502 IPI:IPI00534528 PIR:F96597 RefSeq:NP_564693.1
UniGene:At.19898 ProteinModelPortal:Q9ZVU8 SMR:Q9ZVU8 STRING:Q9ZVU8
PRIDE:Q9ZVU8 EnsemblPlants:AT1G55530.1 GeneID:842000
KEGG:ath:AT1G55530 TAIR:At1g55530 InParanoid:Q9ZVU8 OMA:FVEEMED
PhylomeDB:Q9ZVU8 ProtClustDB:CLSN2917296 Genevestigator:Q9ZVU8
Uniprot:Q9ZVU8
Length = 351
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL+ + G++A MPC+H +H DCL+ WL+ S CP+CR+QL
Sbjct: 223 CSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 152 SQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQL 200
S +C +CL+ +EG K R+ C H +H DC+ WL S CPLCR Q+
Sbjct: 58 SPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>TAIR|locus:2161058 [details] [associations]
symbol:ATCRT1 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB009049 HSSP:Q9LRB7
HOGENOM:HOG000237766 OMA:RTNERGH ProtClustDB:CLSN2690330
EMBL:AY063905 EMBL:AY091194 IPI:IPI00529169 RefSeq:NP_200445.1
UniGene:At.8859 ProteinModelPortal:Q9FM98 SMR:Q9FM98
EnsemblPlants:AT5G56340.1 GeneID:835734 KEGG:ath:AT5G56340
TAIR:At5g56340 eggNOG:NOG328547 InParanoid:Q9FM98 PhylomeDB:Q9FM98
ArrayExpress:Q9FM98 Genevestigator:Q9FM98 Uniprot:Q9FM98
Length = 396
Score = 142 (55.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 140 QVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQ 199
+ ++ P ++ C +CL+ ++G++A MPC H +H C+V WL+ S CP+CRF+
Sbjct: 243 EAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFE 302
Query: 200 L 200
L
Sbjct: 303 L 303
>TAIR|locus:2115924 [details] [associations]
symbol:AT4G05350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161503
HSSP:Q9LRB7 eggNOG:NOG282652 IPI:IPI00547966 PIR:C85067
RefSeq:NP_192444.1 UniGene:At.64174 ProteinModelPortal:Q9M0W0
SMR:Q9M0W0 EnsemblPlants:AT4G05350.1 GeneID:825883
KEGG:ath:AT4G05350 TAIR:At4g05350 HOGENOM:HOG000153211
InParanoid:Q9M0W0 PhylomeDB:Q9M0W0 ProtClustDB:CLSN2685557
Genevestigator:Q9M0W0 Uniprot:Q9M0W0
Length = 206
Score = 137 (53.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 156 CVICLEVMKEGSK---AARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICLE + G K RM CSH++H CL+ WLK + CPLCR ++
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>TAIR|locus:2131463 [details] [associations]
symbol:AT4G26400 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] [GO:0000303 "response to
superoxide" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009743 "response to carbohydrate stimulus"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
OMA:RSADNGS HOGENOM:HOG000237766 EMBL:AY099807 EMBL:BT000305
EMBL:AK317517 IPI:IPI00548539 RefSeq:NP_194370.2 RefSeq:NP_849554.1
UniGene:At.45862 ProteinModelPortal:Q8L5Z3 SMR:Q8L5Z3 STRING:Q8L5Z3
EnsemblPlants:AT4G26400.1 EnsemblPlants:AT4G26400.2 GeneID:828746
KEGG:ath:AT4G26400 TAIR:At4g26400 InParanoid:Q8L5Z3
PhylomeDB:Q8L5Z3 ProtClustDB:CLSN2690330 Genevestigator:Q8L5Z3
Uniprot:Q8L5Z3
Length = 356
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 140 QVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQ 199
+V+ P ++ C ICL+ +GS+A MPC H +H C+V WL+ S CP+CR++
Sbjct: 225 EVVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYE 284
Query: 200 L 200
L
Sbjct: 285 L 285
>TAIR|locus:2034924 [details] [associations]
symbol:AT1G18780 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC011809
HOGENOM:HOG000152571 EMBL:DQ059091 IPI:IPI00546155 PIR:F86321
RefSeq:NP_173313.1 UniGene:At.64833 ProteinModelPortal:Q9M9U8
SMR:Q9M9U8 PRIDE:Q9M9U8 EnsemblPlants:AT1G18780.1 GeneID:838460
KEGG:ath:AT1G18780 TAIR:At1g18780 eggNOG:NOG273075
InParanoid:Q9M9U8 OMA:HEFDEEC PhylomeDB:Q9M9U8
Genevestigator:Q9M9U8 Uniprot:Q9M9U8
Length = 325
Score = 140 (54.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 136 SINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPL 195
++N + K A + C C ICLE +G +PC H + ++C++ W S +CPL
Sbjct: 258 ALNRKTYKKASGVV-CENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPL 316
Query: 196 CRFQL 200
CR +L
Sbjct: 317 CRLEL 321
>TAIR|locus:2063912 [details] [associations]
symbol:RHC2A "RING-H2 finger C2A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC003000 EMBL:AF079186
EMBL:AY074579 EMBL:AY094016 EMBL:AY086492 IPI:IPI00547455
PIR:T01001 RefSeq:NP_030517.1 UniGene:At.22315 UniGene:At.71452
ProteinModelPortal:O22283 SMR:O22283 STRING:O22283 PRIDE:O22283
EnsemblPlants:AT2G39720.1 GeneID:818556 KEGG:ath:AT2G39720
TAIR:At2g39720 HOGENOM:HOG000238692 InParanoid:O22283 OMA:FAGRIMR
PhylomeDB:O22283 ProtClustDB:CLSN2917284 ArrayExpress:O22283
Genevestigator:O22283 InterPro:IPR010543 Pfam:PF06547
Uniprot:O22283
Length = 401
Score = 141 (54.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
SQ +C +C E S A MPC+HIYH DC++ WL + CP+CR +L
Sbjct: 197 SQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHEL 245
>TAIR|locus:2102569 [details] [associations]
symbol:RZF1 "AT3G56580" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:1902006 "negative regulation of
proline biosynthetic process" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG235630
KO:K11982 HOGENOM:HOG000237766 ProtClustDB:CLSN2688851
EMBL:AY045983 EMBL:AY096613 EMBL:DQ059114 IPI:IPI00530247
RefSeq:NP_001030874.1 RefSeq:NP_567039.1 RefSeq:NP_974448.1
UniGene:At.26186 ProteinModelPortal:Q94AK4 SMR:Q94AK4 STRING:Q94AK4
EnsemblPlants:AT3G56580.1 EnsemblPlants:AT3G56580.2
EnsemblPlants:AT3G56580.3 GeneID:824825 KEGG:ath:AT3G56580
TAIR:At3g56580 InParanoid:Q94AK4 OMA:AYYNETA PhylomeDB:Q94AK4
ArrayExpress:Q94AK4 Genevestigator:Q94AK4 Uniprot:Q94AK4
Length = 320
Score = 139 (54.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
S +C +C + + S+A +MPC HIYH DC+V WL + CP+CR +L
Sbjct: 182 SDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>TAIR|locus:2035843 [details] [associations]
symbol:AT1G14200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
EMBL:AC007576 ProtClustDB:CLSN2682926 EMBL:BT004591 EMBL:AK227511
IPI:IPI00533236 PIR:G86275 RefSeq:NP_172872.1 UniGene:At.41984
ProteinModelPortal:Q9XI67 SMR:Q9XI67 STRING:Q9XI67 DNASU:837980
EnsemblPlants:AT1G14200.1 GeneID:837980 KEGG:ath:AT1G14200
TAIR:At1g14200 HOGENOM:HOG000029104 InParanoid:Q9XI67 OMA:WIGFSIN
PhylomeDB:Q9XI67 Genevestigator:Q9XI67 Uniprot:Q9XI67
Length = 179
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL+ +G AA MPC H +H C+ WL + CP+CR+++
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEM 153
>TAIR|locus:2139074 [details] [associations]
symbol:AT4G12210 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG282652 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000153211
ProtClustDB:CLSN2685557 IPI:IPI00546395 PIR:T48131
RefSeq:NP_192958.1 UniGene:At.64182 ProteinModelPortal:Q9STJ0
SMR:Q9STJ0 EnsemblPlants:AT4G12210.1 GeneID:826829
KEGG:ath:AT4G12210 TAIR:At4g12210 InParanoid:Q9STJ0 OMA:CTHIFHE
PhylomeDB:Q9STJ0 Genevestigator:Q9STJ0 Uniprot:Q9STJ0
Length = 203
Score = 136 (52.9 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 72 SALNVAFHAHPSIIYKITSYAHSAANEYHNMGSGI-IPLVVIIKAANVSYXXXXXXXXXX 130
S L F +H + + S +AA + +G I +VV + VS
Sbjct: 73 SLLRTRFASHHWLCDDLASEISTAAIDLGFGRNGFTITVVVTVTYRTVSVTSNNKKSLRI 132
Query: 131 XXVTRSINTQVLK-LAPAIEGCSQQYCVICLEVMKEGSKAA---RMPCSHIYHQDCLVNW 186
+ R I + LK L E CS ICLE + G K + RM CSH++H CL+ W
Sbjct: 133 VLLGR-IKAEELKSLKMETESCS-----ICLENLVSGPKPSDLTRMTCSHVFHNPCLLEW 186
Query: 187 LKNSSLCPLCRFQL 200
+ CPLCR +L
Sbjct: 187 FMRKNTCPLCRTEL 200
>TAIR|locus:2200301 [details] [associations]
symbol:AT1G68070 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0005774
GO:GO:0046872 GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 ProtClustDB:CLSN2682050
EMBL:BT024880 IPI:IPI00540766 PIR:H96703 RefSeq:NP_176974.1
UniGene:At.35572 ProteinModelPortal:Q9C9X1 SMR:Q9C9X1 PRIDE:Q9C9X1
EnsemblPlants:AT1G68070.1 GeneID:843135 KEGG:ath:AT1G68070
TAIR:At1g68070 InParanoid:Q9C9X1 OMA:MLWNTAF PhylomeDB:Q9C9X1
Genevestigator:Q9C9X1 Uniprot:Q9C9X1
Length = 343
Score = 138 (53.6 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL ++G++ +PC+H +H C+V WLK ++ CPLC+F +
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 153 QQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQL 200
++ C ICL +EG K +P CSH YH +C+ WLK S CPLCR +
Sbjct: 104 EKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
>TAIR|locus:2086380 [details] [associations]
symbol:AT3G14970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000370 IPI:IPI00548062
RefSeq:NP_188115.1 UniGene:At.65090 ProteinModelPortal:Q9LKA8
SMR:Q9LKA8 EnsemblPlants:AT3G14970.1 GeneID:820726
KEGG:ath:AT3G14970 TAIR:At3g14970 eggNOG:NOG246587
HOGENOM:HOG000153041 InParanoid:Q9LKA8 OMA:INVIVWR PhylomeDB:Q9LKA8
ProtClustDB:CLSN2685086 Genevestigator:Q9LKA8 Uniprot:Q9LKA8
Length = 220
Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 152 SQQYCVICLEVMKEGSKAA--RMPCSHIYHQDCLVNWLKNSSLCPLCR 197
++ +CVIC++ ++ G A RMPCSH++H+ C +WL+ S +CP+CR
Sbjct: 168 NESWCVICMDKIRIGLDVAAGRMPCSHVFHRTCGEDWLRCSGICPVCR 215
>UNIPROTKB|Q3T0W3 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:BC102230 IPI:IPI00699256
RefSeq:NP_001029682.1 UniGene:Bt.44205 ProteinModelPortal:Q3T0W3
Ensembl:ENSBTAT00000024336 GeneID:515743 KEGG:bta:515743 CTD:51255
eggNOG:NOG294567 HOGENOM:HOG000031081 HOVERGEN:HBG108412
InParanoid:Q3T0W3 OMA:EEQYRQN OrthoDB:EOG40VVQW NextBio:20871984
Uniprot:Q3T0W3
Length = 153
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E A MPC H++H +C++ WL ++ CPLCR +L
Sbjct: 76 CPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 120
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL +E A MPC H++H +C++ WL ++ CPLCR +L
Sbjct: 76 CPVCLLEFEEEETAIEMPCRHLFHSNCILPWLSKTNSCPLCRHEL 120
>TAIR|locus:2118056 [details] [associations]
symbol:AT4G12140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL049638
EMBL:AL161533 eggNOG:NOG246550 HOGENOM:HOG000153211 IPI:IPI00529226
PIR:T06621 RefSeq:NP_192951.1 UniGene:At.65367
ProteinModelPortal:Q9SZ79 SMR:Q9SZ79 DNASU:826822
EnsemblPlants:AT4G12140.1 GeneID:826822 KEGG:ath:AT4G12140
TAIR:At4g12140 InParanoid:Q9SZ79 OMA:NDPIPKP PhylomeDB:Q9SZ79
ProtClustDB:CLSN2915911 ArrayExpress:Q9SZ79 Genevestigator:Q9SZ79
Uniprot:Q9SZ79
Length = 202
Score = 135 (52.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 156 CVICLEVMKEGSKAA--RMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C ICL+ + SK RM CSH++H CLV WLK + CP+CR
Sbjct: 153 CSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCR 196
>ZFIN|ZDB-GENE-080303-32 [details] [associations]
symbol:zgc:175214 "zgc:175214" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-080303-32 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000004806
HOVERGEN:HBG058899 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
EMBL:CR812943 EMBL:BC159258 IPI:IPI00481280 RefSeq:NP_001108199.1
UniGene:Dr.40552 SMR:B0JZN6 Ensembl:ENSDART00000030435
Ensembl:ENSDART00000137357 GeneID:557610 KEGG:dre:557610
NextBio:20882066 Uniprot:B0JZN6
Length = 155
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 136 SINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPL 195
S N VLK A Q C +CLE K + PCSH +H+ CL+ WL+ S+CP+
Sbjct: 70 SYNEVVLKGAGKKLSLLGQPCAVCLEEFKTRDELGVCPCSHTFHKKCLLKWLEIRSVCPM 129
Query: 196 C 196
C
Sbjct: 130 C 130
>DICTYBASE|DDB_G0271294 [details] [associations]
symbol:DDB_G0271294 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0271294
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000006 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_645668.1 ProteinModelPortal:Q55BE4
EnsemblProtists:DDB0202843 GeneID:8617860 KEGG:ddi:DDB_G0271294
eggNOG:NOG294050 InParanoid:Q55BE4 OMA:NCRYPLP Uniprot:Q55BE4
Length = 161
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL ++A ++PC H +H +CL +WLK S+ CP CR+ L
Sbjct: 66 CTICLCEFPIDTEALKLPCKHYFHHECLDSWLKTSAACPNCRYPL 110
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 EGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
+GC + C +CL + G +PC H+YH DC+ WL S CPLCR
Sbjct: 73 DGCETKTTECAVCLMDLVPGDLIRPLPCKHVYHLDCINQWLTRSFTCPLCR 123
>TAIR|locus:2037683 [details] [associations]
symbol:RHA2A "RING-H2 finger A2A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IMP] [GO:0009789 "positive
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0047484 "regulation of response to osmotic
stress" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0009738 GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 EMBL:AC007591 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0047484 EMBL:AF078822 EMBL:DQ059097
EMBL:AY075590 EMBL:AY094057 EMBL:AY088303 IPI:IPI00526860
PIR:T51842 RefSeq:NP_172962.1 UniGene:At.10851
ProteinModelPortal:Q9ZT50 SMR:Q9ZT50 IntAct:Q9ZT50 STRING:Q9ZT50
EnsemblPlants:AT1G15100.1 GeneID:838073 KEGG:ath:AT1G15100
GeneFarm:4092 TAIR:At1g15100 eggNOG:NOG316107 HOGENOM:HOG000090787
InParanoid:Q9ZT50 KO:K16282 OMA:EVRKLEC PhylomeDB:Q9ZT50
ProtClustDB:CLSN2679440 Genevestigator:Q9ZT50 Uniprot:Q9ZT50
Length = 155
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSL-CPLCRFQL 200
CV+CL +KEG + ++ C H++H+ CL WL + CPLCR L
Sbjct: 86 CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSAL 131
>UNIPROTKB|F1P2A5 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00820139
Ensembl:ENSGALT00000006632 ArrayExpress:F1P2A5 Uniprot:F1P2A5
Length = 880
Score = 140 (54.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 824 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 872
>TAIR|locus:2145086 [details] [associations]
symbol:AT5G52140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG243435
EMBL:DQ447065 IPI:IPI00526226 RefSeq:NP_200027.2 UniGene:At.55498
ProteinModelPortal:Q1PDK3 SMR:Q1PDK3 EnsemblPlants:AT5G52140.1
GeneID:835290 KEGG:ath:AT5G52140 TAIR:At5g52140
HOGENOM:HOG000124786 InParanoid:Q1PDK3 OMA:DDIQETH PhylomeDB:Q1PDK3
ProtClustDB:CLSN2920553 ArrayExpress:Q1PDK3 Genevestigator:Q1PDK3
Uniprot:Q1PDK3
Length = 280
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL +G K +PC HIYH+DC+ WLK + +C +C+ ++
Sbjct: 234 CSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
Score = 37 (18.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 18 EDDDLIQSTHDHE 30
EDD IQ TH H+
Sbjct: 109 EDD--IQETHHHQ 119
>ZFIN|ZDB-GENE-091118-64 [details] [associations]
symbol:rnf165a "ring finger protein 165a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091118-64 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CU466271 IPI:IPI01007348 Ensembl:ENSDART00000097796
Bgee:E9QHW9 Uniprot:E9QHW9
Length = 311
Score = 137 (53.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 259 CTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDI 303
>UNIPROTKB|E1BSQ8 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005737 GO:GO:0045893 GO:GO:0043234
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030511
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00592682
ProteinModelPortal:E1BSQ8 Ensembl:ENSGALT00000034463
ArrayExpress:E1BSQ8 Uniprot:E1BSQ8
Length = 976
Score = 140 (54.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 920 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 968
>UNIPROTKB|E2R7H1 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AAEX03016176 EMBL:AAEX03016177
EMBL:AAEX03016178 RefSeq:XP_535498.2 ProteinModelPortal:E2R7H1
Ensembl:ENSCAFT00000026314 GeneID:478323 KEGG:cfa:478323
Uniprot:E2R7H1
Length = 985
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 929 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 135 RSINTQVLKLAPAIE-GCSQQYCVICLEVMKEGSKAARM--PCSHIYHQDCLVNWLKNSS 191
+S + V A IE G + CV+CL K+ + R+ PC H++H DC+ WL +SS
Sbjct: 63 KSFPSFVYTEARGIEPGIGELECVVCLNEFKD-DETLRLVPPCVHVFHADCVDIWLSHSS 121
Query: 192 LCPLCR 197
CP+CR
Sbjct: 122 TCPICR 127
>UNIPROTKB|Q5R476 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9601 "Pongo abelii" [GO:0032184 "SUMO polymer binding"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0032184 CTD:54778 HOVERGEN:HBG093884 KO:K10635
EMBL:CR861381 RefSeq:NP_001124565.1 UniGene:Pab.18469
ProteinModelPortal:Q5R476 GeneID:100169738 KEGG:pon:100169738
InParanoid:Q5R476 Uniprot:Q5R476
Length = 986
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 930 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>RGD|1310097 [details] [associations]
symbol:Rnf111 "ring finger protein 111" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA;ISO] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046332 "SMAD
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1310097 GO:GO:0005737
GO:GO:0045893 GO:GO:0043234 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0030579 EMBL:CH474041 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 OrthoDB:EOG4MSCXR IPI:IPI00370163
RefSeq:NP_001100306.1 UniGene:Rn.82537 Ensembl:ENSRNOT00000017918
GeneID:300813 KEGG:rno:300813 UCSC:RGD:1310097 NextBio:647579
Uniprot:D4A9T1
Length = 987
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 931 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 979
>MGI|MGI:1934919 [details] [associations]
symbol:Rnf111 "ring finger 111" species:10090 "Mus musculus"
[GO:0000209 "protein polyubiquitination" evidence=IGI;IMP;IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IMP;IDA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IMP;IDA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IMP;IDA] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046332 "SMAD binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:1934919 Prosite:PS00518 GO:GO:0005737 GO:GO:0045893
GO:GO:0043234 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0032184 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ EMBL:AF330197
EMBL:AK048110 EMBL:AK036351 EMBL:AK137148 EMBL:BC054842
EMBL:BC069835 IPI:IPI00117820 IPI:IPI00830944 RefSeq:NP_291082.1
UniGene:Mm.29783 ProteinModelPortal:Q99ML9 SMR:Q99ML9 IntAct:Q99ML9
MINT:MINT-1899537 STRING:Q99ML9 PhosphoSite:Q99ML9 PRIDE:Q99ML9
Ensembl:ENSMUST00000034739 Ensembl:ENSMUST00000113595 GeneID:93836
KEGG:mmu:93836 UCSC:uc009qoa.1 UCSC:uc009qoe.1
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 InParanoid:Q99ML9
OrthoDB:EOG4MSCXR NextBio:351685 Bgee:Q99ML9 CleanEx:MM_RNF111
Genevestigator:Q99ML9 Uniprot:Q99ML9
Length = 989
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 933 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 981
>UNIPROTKB|A6QLE0 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 OrthoDB:EOG4MSCXR
EMBL:DAAA02028816 EMBL:DAAA02028817 EMBL:DAAA02028818 EMBL:BC147931
IPI:IPI00867083 RefSeq:NP_001095709.1 UniGene:Bt.48619
STRING:A6QLE0 Ensembl:ENSBTAT00000018858 GeneID:540353
KEGG:bta:540353 InParanoid:A6QLE0 NextBio:20878580 Uniprot:A6QLE0
Length = 994
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 938 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>UNIPROTKB|Q6ZNA4 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0032184
"SUMO polymer binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Reactome:REACT_111102 Reactome:REACT_6900
Pathway_Interaction_DB:tgfbrpathway GO:GO:0043234 GO:GO:0005654
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0007179 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
EMBL:CH471082 GO:GO:0006367 GO:GO:0032184 GO:GO:0030579
EMBL:AC092757 EMBL:AK095327 EMBL:AK131304 EMBL:AK131488
EMBL:AL157474 EMBL:BX538130 EMBL:BX647259 EMBL:AC025918
EMBL:AC090515 EMBL:BC010369 EMBL:BC020984 EMBL:BC060862
IPI:IPI00418593 IPI:IPI00798384 IPI:IPI00829658 PIR:T46904
RefSeq:NP_001257457.1 RefSeq:NP_001257458.1 RefSeq:NP_001257459.1
RefSeq:NP_060080.6 UniGene:Hs.404423 UniGene:Hs.603489
UniGene:Hs.741727 PDB:2KIZ PDBsum:2KIZ ProteinModelPortal:Q6ZNA4
SMR:Q6ZNA4 IntAct:Q6ZNA4 MINT:MINT-1187466 STRING:Q6ZNA4
PhosphoSite:Q6ZNA4 DMDM:308153555 PRIDE:Q6ZNA4
Ensembl:ENST00000348370 Ensembl:ENST00000434298
Ensembl:ENST00000557998 Ensembl:ENST00000559209
Ensembl:ENST00000561186 GeneID:54778 KEGG:hsa:54778 UCSC:uc002afs.3
UCSC:uc002aft.3 UCSC:uc002afv.3 CTD:54778 GeneCards:GC15P059160
HGNC:HGNC:17384 HPA:HPA038576 HPA:HPA038577 MIM:605840
neXtProt:NX_Q6ZNA4 PharmGKB:PA134868772 eggNOG:NOG291583
HOVERGEN:HBG093884 InParanoid:Q6ZNA4 KO:K10635 OMA:CDDSQKQ
GenomeRNAi:54778 NextBio:57437 Bgee:Q6ZNA4 CleanEx:HS_RNF111
Genevestigator:Q6ZNA4 Uniprot:Q6ZNA4
Length = 994
Score = 140 (54.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+++ C ICL +++EG R+PC H++HQ C+ WL + CP+CR +
Sbjct: 938 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>TAIR|locus:2034939 [details] [associations]
symbol:AT1G18760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
InterPro:IPR003903 PROSITE:PS50330 EMBL:AC011809
HOGENOM:HOG000152571 EMBL:DQ086850 IPI:IPI00538681 PIR:E86321
RefSeq:NP_173311.1 UniGene:At.64831 ProteinModelPortal:Q9M9U7
SMR:Q9M9U7 PRIDE:Q9M9U7 EnsemblPlants:AT1G18760.1 GeneID:838458
KEGG:ath:AT1G18760 TAIR:At1g18760 eggNOG:NOG283378
InParanoid:Q9M9U7 PhylomeDB:Q9M9U7 Genevestigator:Q9M9U7
Uniprot:Q9M9U7
Length = 224
Score = 135 (52.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
S + C ICLE +G+K +PC H + +C++ W + + CPLCRF+L
Sbjct: 171 STERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHDCPLCRFKL 219
>UNIPROTKB|F1RPS5 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:FP015922
Ensembl:ENSSSCT00000004974 Uniprot:F1RPS5
Length = 327
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 268 ESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 319
>UNIPROTKB|I3LPH2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:FP015922
Ensembl:ENSSSCT00000022369 Uniprot:I3LPH2
Length = 329
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 270 ESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 321
>UNIPROTKB|Q6ZSG1 [details] [associations]
symbol:RNF165 "RING finger protein 165" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018931 EMBL:AK127467 EMBL:AK122819
EMBL:AC015959 EMBL:AC021763 IPI:IPI00161541 RefSeq:NP_001243687.1
RefSeq:NP_689683.2 UniGene:Hs.501114 ProteinModelPortal:Q6ZSG1
SMR:Q6ZSG1 IntAct:Q6ZSG1 STRING:Q6ZSG1 DMDM:74762404 PRIDE:Q6ZSG1
Ensembl:ENST00000269439 Ensembl:ENST00000543885 GeneID:494470
KEGG:hsa:494470 UCSC:uc002lby.1 CTD:494470 GeneCards:GC18P043914
HGNC:HGNC:31696 neXtProt:NX_Q6ZSG1 PharmGKB:PA134972127
eggNOG:NOG243435 HOGENOM:HOG000154155 HOVERGEN:HBG093904
InParanoid:Q6ZSG1 OMA:FSHQLQT OrthoDB:EOG4J6RRC PhylomeDB:Q6ZSG1
GenomeRNAi:494470 NextBio:111870 ArrayExpress:Q6ZSG1 Bgee:Q6ZSG1
CleanEx:HS_RNF165 Genevestigator:Q6ZSG1 GermOnline:ENSG00000141622
Uniprot:Q6ZSG1
Length = 346
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>UNIPROTKB|F1PHU2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:AAEX03005372
EMBL:AAEX03005373 Ensembl:ENSCAFT00000027965 Uniprot:F1PHU2
Length = 347
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 288 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>MGI|MGI:2444521 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2444521
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:Mm.23293 GeneTree:ENSGT00670000097625
CTD:494470 eggNOG:NOG243435 OMA:FSHQLQT EMBL:AC102135 EMBL:AK133955
IPI:IPI00266063 RefSeq:NP_001157976.1 ProteinModelPortal:E9QAU8
SMR:E9QAU8 PRIDE:E9QAU8 Ensembl:ENSMUST00000026494 GeneID:225743
KEGG:mmu:225743 HOGENOM:HOG000171096 HOVERGEN:HBG101911
NextBio:377780 Bgee:E9QAU8 Uniprot:E9QAU8
Length = 347
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 288 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>RGD|1560744 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1560744 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FSHQLQT IPI:IPI00367219
Ensembl:ENSRNOT00000028929 Uniprot:E9PSS3
Length = 348
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 289 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 340
>ZFIN|ZDB-GENE-030616-560 [details] [associations]
symbol:si:dkey-51a16.9 "si:dkey-51a16.9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030616-560 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:BX530079 IPI:IPI00882963 Ensembl:ENSDART00000057687
ArrayExpress:F1Q9J1 Bgee:F1Q9J1 Uniprot:F1Q9J1
Length = 155
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE + + PCSH +H+ CLV WL+ S+CP+C
Sbjct: 89 QTCAVCLEEFRSRDELGVCPCSHAFHKKCLVKWLEIRSVCPMC 131
>TAIR|locus:2200610 [details] [associations]
symbol:AT1G26800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006535
EMBL:AF361638 EMBL:AY052705 EMBL:AY055097 IPI:IPI00539847
RefSeq:NP_564263.1 UniGene:At.15652 ProteinModelPortal:Q9LQX2
SMR:Q9LQX2 STRING:Q9LQX2 EnsemblPlants:AT1G26800.1 GeneID:839223
KEGG:ath:AT1G26800 TAIR:At1g26800 InParanoid:Q9LQX2 OMA:IDAMPIV
PhylomeDB:Q9LQX2 ProtClustDB:CLSN2682926 Genevestigator:Q9LQX2
Uniprot:Q9LQX2
Length = 204
Score = 133 (51.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
I+GC + CVICLE K MPC H +H C+ WL CP+CR+++
Sbjct: 106 IDGCEGE-CVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEM 157
>UNIPROTKB|F1MJP2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:DAAA02056918
IPI:IPI00695048 Ensembl:ENSBTAT00000001499 Uniprot:F1MJP2
Length = 350
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
E + + C ICL ++++G R+PC H++HQ C+ WL S CP+CR +
Sbjct: 291 ESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 342
>TAIR|locus:2038766 [details] [associations]
symbol:RHA2B "RING-H2 finger protein 2B" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC006200
HOGENOM:HOG000090787 KO:K16282 ProtClustDB:CLSN2679440
EMBL:AF078823 IPI:IPI00526074 PIR:C84421 PIR:T51843
RefSeq:NP_565253.1 UniGene:At.21443 ProteinModelPortal:Q9ZU51
SMR:Q9ZU51 IntAct:Q9ZU51 STRING:Q9ZU51 EnsemblPlants:AT2G01150.1
GeneID:814644 KEGG:ath:AT2G01150 GeneFarm:4093 TAIR:At2g01150
eggNOG:NOG328417 InParanoid:Q9ZU51 OMA:YRYSDNA PhylomeDB:Q9ZU51
Genevestigator:Q9ZU51 GermOnline:AT2G01150 Uniprot:Q9ZU51
Length = 147
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSL-CPLCRFQL 200
C++CL +K G + ++ C H++H+ CL WL++ + CPLCR L
Sbjct: 74 CIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPL 119
>TAIR|locus:2159320 [details] [associations]
symbol:AT5G60820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 EMBL:AB015472 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 IPI:IPI00538810 RefSeq:NP_200890.1 UniGene:At.43736
ProteinModelPortal:Q9FJH4 SMR:Q9FJH4 PRIDE:Q9FJH4
EnsemblPlants:AT5G60820.1 GeneID:836203 KEGG:ath:AT5G60820
TAIR:At5g60820 eggNOG:NOG239027 HOGENOM:HOG000148336
InParanoid:Q9FJH4 OMA:MENDDDA PhylomeDB:Q9FJH4
ProtClustDB:CLSN2686704 Genevestigator:Q9FJH4 Uniprot:Q9FJH4
Length = 419
Score = 137 (53.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C E M G + A +PC H YH +C+V WL + CP+CRF+L
Sbjct: 372 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416
>TAIR|locus:2206540 [details] [associations]
symbol:AT1G57730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AC079733 HOGENOM:HOG000131741 IPI:IPI00522937 PIR:F96611
RefSeq:NP_176085.1 UniGene:At.66046 ProteinModelPortal:Q9FVT1
SMR:Q9FVT1 DNASU:842148 EnsemblPlants:AT1G57730.1 GeneID:842148
KEGG:ath:AT1G57730 TAIR:At1g57730 eggNOG:NOG324968
InParanoid:Q9FVT1 PhylomeDB:Q9FVT1 ProtClustDB:CLSN2912817
Genevestigator:Q9FVT1 Uniprot:Q9FVT1
Length = 174
Score = 126 (49.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 156 CVICLEVMKEG-SKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
C ICLE M + MP C H++H DC+ WL +S+LCPLCR
Sbjct: 116 CAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKWLGHSNLCPLCR 159
>TAIR|locus:2177886 [details] [associations]
symbol:AT5G41450 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AB006707
HOGENOM:HOG000141530 EMBL:DQ056702 IPI:IPI00518951
RefSeq:NP_198960.1 UniGene:At.64267 ProteinModelPortal:Q9FN56
SMR:Q9FN56 PRIDE:Q9FN56 EnsemblPlants:AT5G41450.1 GeneID:834146
KEGG:ath:AT5G41450 TAIR:At5g41450 eggNOG:NOG268316
InParanoid:Q9FN56 OMA:HETTILE PhylomeDB:Q9FN56
Genevestigator:Q9FN56 Uniprot:Q9FN56
Length = 164
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 139 TQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
T +L+ EG ++ +C ICLE ++G + R+ C H++H+ C+ WL + CP CR
Sbjct: 93 TTILEFKDIKEGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCR 152
Query: 198 FQLS 201
L+
Sbjct: 153 CSLT 156
>ZFIN|ZDB-GENE-041114-40 [details] [associations]
symbol:rnf24 "ring finger protein 24" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-041114-40
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE EMBL:BX004888
EMBL:BC085525 IPI:IPI00506880 RefSeq:NP_001007353.1
UniGene:Dr.88655 SMR:Q5U3J0 Ensembl:ENSDART00000053681
GeneID:492480 KEGG:dre:492480 InParanoid:Q5U3J0 NextBio:20865041
Uniprot:Q5U3J0
Length = 149
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 140 QVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
QV++ E + C +CLE K+ + PC H +H+ CL+ WL+ +CPLC
Sbjct: 62 QVIQKEKVKELNLHEICAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
>ZFIN|ZDB-GENE-091204-454 [details] [associations]
symbol:si:ch1073-392o20.1 "si:ch1073-392o20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091204-454 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K15699 OMA:PIAGPPE
GeneTree:ENSGT00700000104226 EMBL:CABZ01074899 EMBL:CABZ01074900
EMBL:CU855950 IPI:IPI00934891 RefSeq:XP_002663295.2
Ensembl:ENSDART00000092836 GeneID:100329730 KEGG:dre:100329730
Uniprot:E7FGJ5
Length = 155
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 141 VLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
VLK P Q C +CLE K + +PC H +H+ C+V WL+ +CP+C L
Sbjct: 78 VLKGDPKKLNLHGQTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMCNKPL 137
Query: 201 S 201
S
Sbjct: 138 S 138
>TAIR|locus:2177866 [details] [associations]
symbol:AT5G41430 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB006707 HOGENOM:HOG000141530 IPI:IPI00536823
RefSeq:NP_198958.1 UniGene:At.65616 ProteinModelPortal:Q9FN58
SMR:Q9FN58 EnsemblPlants:AT5G41430.1 GeneID:834144
KEGG:ath:AT5G41430 TAIR:At5g41430 eggNOG:NOG301420
InParanoid:Q9FN58 OMA:HEIIRIK PhylomeDB:Q9FN58
ProtClustDB:CLSN2686368 Genevestigator:Q9FN58 Uniprot:Q9FN58
Length = 161
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
EG + C ICLE +++G + R+ C H++H+ C+ +WLK + CP CR
Sbjct: 110 EGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCR 159
>TAIR|locus:2060699 [details] [associations]
symbol:AT2G29840 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00534940
RefSeq:NP_180545.2 UniGene:At.49362 ProteinModelPortal:F4ILN3
SMR:F4ILN3 EnsemblPlants:AT2G29840.1 GeneID:817534
KEGG:ath:AT2G29840 Uniprot:F4ILN3
Length = 293
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 136 SINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPL 195
S+N + K A + G + C ICLE +G +PC H + +C + W + + CPL
Sbjct: 225 SLNRKTYKKASDVVG-ENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDCPL 283
Query: 196 CRFQL 200
CRF+L
Sbjct: 284 CRFKL 288
>GENEDB_PFALCIPARUM|PF14_0215 [details] [associations]
symbol:PF14_0215 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNS 190
+T++I T K A A E ++ C+IC + +KEGSK ++ CSHI+H DCL +W
Sbjct: 276 LTKNIET---KFANATEEELKEAGTCIICRDDLKEGSK--KLSCSHIFHVDCLKSWFIQQ 330
Query: 191 SLCPLCRFQL 200
CP+CR ++
Sbjct: 331 QTCPICRTEI 340
>UNIPROTKB|Q8ILM8 [details] [associations]
symbol:PF14_0215 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNS 190
+T++I T K A A E ++ C+IC + +KEGSK ++ CSHI+H DCL +W
Sbjct: 276 LTKNIET---KFANATEEELKEAGTCIICRDDLKEGSK--KLSCSHIFHVDCLKSWFIQQ 330
Query: 191 SLCPLCRFQL 200
CP+CR ++
Sbjct: 331 QTCPICRTEI 340
>TAIR|locus:2090980 [details] [associations]
symbol:AT3G14320 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB022220 IPI:IPI00542849
RefSeq:NP_188049.1 UniGene:At.65086 ProteinModelPortal:Q9LUL6
SMR:Q9LUL6 EnsemblPlants:AT3G14320.1 GeneID:820652
KEGG:ath:AT3G14320 TAIR:At3g14320 eggNOG:NOG324121
HOGENOM:HOG000034170 InParanoid:Q9LUL6 OMA:SNSTCPI PhylomeDB:Q9LUL6
ProtClustDB:CLSN2915567 Genevestigator:Q9LUL6 GermOnline:AT3G14320
Uniprot:Q9LUL6
Length = 204
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 137 INTQVLKLAPAIEGCSQQY-----CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNS 190
I VL+ P ++ ++ + CV+CL + +G KA +P C H +H +C+ +WL+++
Sbjct: 64 IKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSN 123
Query: 191 SLCPLCR 197
S CP+CR
Sbjct: 124 STCPICR 130
>TAIR|locus:1006230652 [details] [associations]
symbol:AT5G07225 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00525847
RefSeq:NP_974747.1 UniGene:At.51412 ProteinModelPortal:F4K6L4
SMR:F4K6L4 PRIDE:F4K6L4 EnsemblPlants:AT5G07225.1 GeneID:2745979
KEGG:ath:AT5G07225 OMA:TILPCTH PhylomeDB:F4K6L4 Uniprot:F4K6L4
Length = 234
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 142 LKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
+K P++E + C+IC G K +PC+H YH+DC+ +WL+NS LC +C+
Sbjct: 177 IKFKPSLE---DKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVCQ 229
>TAIR|locus:2092895 [details] [associations]
symbol:AT3G13430 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000603
HSSP:Q9LRB7 KO:K11982 IPI:IPI00530368 RefSeq:NP_001030687.1
RefSeq:NP_001189879.1 RefSeq:NP_187951.1 UniGene:At.43471
UniGene:At.63540 ProteinModelPortal:Q9LJE9 SMR:Q9LJE9 STRING:Q9LJE9
EnsemblPlants:AT3G13430.1 EnsemblPlants:AT3G13430.2
EnsemblPlants:AT3G13430.3 GeneID:820543 KEGG:ath:AT3G13430
TAIR:At3g13430 InParanoid:Q9LJE9 OMA:RRIRTRH PhylomeDB:Q9LJE9
ProtClustDB:CLSN2684775 Genevestigator:Q9LJE9 Uniprot:Q9LJE9
Length = 315
Score = 134 (52.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +CL+ + G +A MPC H +H DCL+ WL+ S CP+CR+ L
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLL 269
>UNIPROTKB|F1NJF6 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:AADN02054910
IPI:IPI00580705 Ensembl:ENSGALT00000002505 Uniprot:F1NJF6
Length = 148
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 84 QTCAVCLEDFKVKEELGVLPCQHAFHRKCLVKWLEVRCVCPMC 126
>UNIPROTKB|F1Q2J1 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:AAEX03010410
Ensembl:ENSCAFT00000010190 Uniprot:F1Q2J1
Length = 155
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 91 QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>UNIPROTKB|Q9H9V4 [details] [associations]
symbol:RNF122 "RING finger protein 122" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:AK022588 EMBL:BC093884
EMBL:BC101573 IPI:IPI00015624 RefSeq:NP_079063.2 UniGene:Hs.151237
ProteinModelPortal:Q9H9V4 SMR:Q9H9V4 IntAct:Q9H9V4 STRING:Q9H9V4
PhosphoSite:Q9H9V4 DMDM:110816410 PRIDE:Q9H9V4
Ensembl:ENST00000256257 GeneID:79845 KEGG:hsa:79845 UCSC:uc003xjo.1
CTD:79845 GeneCards:GC08M033405 HGNC:HGNC:21147 HPA:HPA003888
neXtProt:NX_Q9H9V4 PharmGKB:PA134892945 HOGENOM:HOG000004806
HOVERGEN:HBG058899 InParanoid:Q9H9V4 KO:K15699 OMA:PIAGPPE
OrthoDB:EOG480HXV PhylomeDB:Q9H9V4 ChiTaRS:RNF122 GenomeRNAi:79845
NextBio:69538 Bgee:Q9H9V4 CleanEx:HS_RNF122 Genevestigator:Q9H9V4
GermOnline:ENSG00000133874 Uniprot:Q9H9V4
Length = 155
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 91 QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>MGI|MGI:1916117 [details] [associations]
symbol:Rnf122 "ring finger protein 122" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916117
Prosite:PS00518 GO:GO:0005783 GO:GO:0016021 GO:GO:0005794
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
CTD:79845 HOGENOM:HOG000004806 HOVERGEN:HBG058899 KO:K15699
OrthoDB:EOG480HXV EMBL:AK077856 EMBL:AK085376 EMBL:AK171823
EMBL:AK136206 EMBL:BC038399 EMBL:BC050268 IPI:IPI00342402
RefSeq:NP_780345.1 UniGene:Mm.29532 UniGene:Mm.400167
ProteinModelPortal:Q8BP31 SMR:Q8BP31 PhosphoSite:Q8BP31
PRIDE:Q8BP31 Ensembl:ENSMUST00000046941 GeneID:68867 KEGG:mmu:68867
UCSC:uc009ljd.1 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
InParanoid:Q8BP31 NextBio:328081 Bgee:Q8BP31 CleanEx:MM_RNF122
Genevestigator:Q8BP31 GermOnline:ENSMUSG00000039328 Uniprot:Q8BP31
Length = 155
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 91 QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 31 QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 73
>TAIR|locus:2165735 [details] [associations]
symbol:AT5G42200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AB017067
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HOGENOM:HOG000237642 EMBL:DQ086857 EMBL:BT003837 EMBL:BT005191
EMBL:AY088186 IPI:IPI00527533 RefSeq:NP_199035.1 UniGene:At.43326
UniGene:At.75664 ProteinModelPortal:Q8L9W3 SMR:Q8L9W3
EnsemblPlants:AT5G42200.1 GeneID:834225 KEGG:ath:AT5G42200
TAIR:At5g42200 eggNOG:NOG261446 InParanoid:Q8L9W3 OMA:LVPGCNH
PhylomeDB:Q8L9W3 ProtClustDB:CLSN2686448 Genevestigator:Q8L9W3
GermOnline:AT5G42200 Uniprot:Q8L9W3
Length = 163
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C +CLE ++ G +P C+H +HQ C WL N ++CP+CR +L+
Sbjct: 104 CAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAELA 150
>TAIR|locus:2199272 [details] [associations]
symbol:AT1G68180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237766 EMBL:BT010696 EMBL:BT021133 EMBL:DQ086851
IPI:IPI00528273 RefSeq:NP_176985.2 UniGene:At.35560
ProteinModelPortal:Q6NPX0 SMR:Q6NPX0 EnsemblPlants:AT1G68180.1
GeneID:843146 KEGG:ath:AT1G68180 TAIR:At1g68180 eggNOG:NOG271210
InParanoid:Q6NPX0 OMA:HDELDIM PhylomeDB:Q6NPX0
ProtClustDB:CLSN2918429 Genevestigator:Q6NPX0 Uniprot:Q6NPX0
Length = 248
Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 153 QQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
++ C IC E + G + + C H+YH C+V+WL + CP+CRF+++
Sbjct: 135 EKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEVN 183
>MGI|MGI:1261771 [details] [associations]
symbol:Rnf24 "ring finger protein 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1261771
Prosite:PS00518 GO:GO:0016021 GO:GO:0000139 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 eggNOG:NOG299260 OMA:KQVIQKE
OrthoDB:EOG4VX26J EMBL:AK048813 EMBL:AK083665 EMBL:AK089207
IPI:IPI00221618 RefSeq:NP_848722.1 UniGene:Mm.477523
ProteinModelPortal:Q8BGI1 SMR:Q8BGI1 PhosphoSite:Q8BGI1
PRIDE:Q8BGI1 Ensembl:ENSMUST00000059372 Ensembl:ENSMUST00000110194
Ensembl:ENSMUST00000165420 GeneID:51902 KEGG:mmu:51902
InParanoid:Q8BGI1 NextBio:308218 Bgee:Q8BGI1 CleanEx:MM_RNF24
Genevestigator:Q8BGI1 GermOnline:ENSMUSG00000048911 Uniprot:Q8BGI1
Length = 148
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
+ C +CLE K + PC H +H+ CLV WL+ +CPLC
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLVKWLEVRKVCPLC 118
>RGD|1309384 [details] [associations]
symbol:Rnf24 "ring finger protein 24" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1309384 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473949 OMA:KQVIQKE OrthoDB:EOG4VX26J
IPI:IPI00210207 UniGene:Rn.230520 SMR:D3ZVL8
Ensembl:ENSRNOT00000028869 UCSC:RGD:1309384 Uniprot:D3ZVL8
Length = 148
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
+ C +CLE K + PC H +H+ CLV WL+ +CPLC
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLVKWLEVRKVCPLC 118
>UNIPROTKB|Q32LD0 [details] [associations]
symbol:RNF24 "Ring finger protein 24" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 eggNOG:NOG299260 OMA:KQVIQKE
OrthoDB:EOG4VX26J EMBL:DAAA02036176 EMBL:DAAA02036174
EMBL:DAAA02036175 EMBL:BC109640 IPI:IPI00697150
RefSeq:NP_001070520.1 UniGene:Bt.50892 SMR:Q32LD0
Ensembl:ENSBTAT00000010416 GeneID:767991 KEGG:bta:767991
InParanoid:Q32LD0 NextBio:20918346 Uniprot:Q32LD0
Length = 148
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
+ C +CLE K + PC H +H+ CL+ WL+ +CPLC
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
>UNIPROTKB|E2R402 [details] [associations]
symbol:RNF24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE
EMBL:AAEX03013826 RefSeq:XP_850078.1 ProteinModelPortal:E2R402
SMR:E2R402 PRIDE:E2R402 Ensembl:ENSCAFT00000009937 GeneID:607703
KEGG:cfa:607703 NextBio:20893409 Uniprot:E2R402
Length = 148
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
+ C +CLE K + PC H +H+ CL+ WL+ +CPLC
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
>UNIPROTKB|Q9Y225 [details] [associations]
symbol:RNF24 "RING finger protein 24" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0046872 GO:GO:0008270 EMBL:CH471133 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL031670 HOGENOM:HOG000004806
HOVERGEN:HBG058899 EMBL:AL096778 EMBL:BT007406 EMBL:BC000213
EMBL:BC039584 EMBL:AL079313 IPI:IPI00797703 IPI:IPI00910656
RefSeq:NP_001127809.1 RefSeq:NP_001127810.1 RefSeq:NP_009150.1
UniGene:Hs.589884 PDB:2EP4 PDBsum:2EP4 ProteinModelPortal:Q9Y225
SMR:Q9Y225 STRING:Q9Y225 PhosphoSite:Q9Y225 DMDM:20139860
PaxDb:Q9Y225 PRIDE:Q9Y225 DNASU:11237 Ensembl:ENST00000336095
Ensembl:ENST00000358395 Ensembl:ENST00000432261
Ensembl:ENST00000545616 GeneID:11237 KEGG:hsa:11237 UCSC:uc002wkh.2
UCSC:uc002wki.2 CTD:11237 GeneCards:GC20M003912 HGNC:HGNC:13779
HPA:HPA011900 MIM:612489 neXtProt:NX_Q9Y225 PharmGKB:PA34428
eggNOG:NOG299260 InParanoid:Q9Y225 OMA:KQVIQKE OrthoDB:EOG4VX26J
PhylomeDB:Q9Y225 ChiTaRS:RNF24 EvolutionaryTrace:Q9Y225
GenomeRNAi:11237 NextBio:42770 Bgee:Q9Y225 CleanEx:HS_RNF24
Genevestigator:Q9Y225 GermOnline:ENSG00000101236 Uniprot:Q9Y225
Length = 148
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
+ C +CLE K + PC H +H+ CL+ WL+ +CPLC
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 118
>DICTYBASE|DDB_G0280089 [details] [associations]
symbol:DDB_G0280089 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0280089 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG235630 RefSeq:XP_641234.1 ProteinModelPortal:Q54VX1
EnsemblProtists:DDB0206368 GeneID:8622365 KEGG:ddi:DDB_G0280089
InParanoid:Q54VX1 OMA:ANESNGH Uniprot:Q54VX1
Length = 457
Score = 134 (52.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C + K G +PC H+YH +C++ WL+ + CP+CRF+L
Sbjct: 356 CAVCKDEFKWGDDYIELPCQHLYHPECILPWLEQHNSCPVCRFEL 400
>TAIR|locus:2053583 [details] [associations]
symbol:AT2G15580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006248
EMBL:AY088497 EMBL:DQ059106 EMBL:BT030630 EMBL:AK317204
IPI:IPI00523969 PIR:G84530 RefSeq:NP_565376.1 UniGene:At.43738
ProteinModelPortal:Q9ZQF5 SMR:Q9ZQF5 PRIDE:Q9ZQF5
EnsemblPlants:AT2G15580.1 GeneID:816051 KEGG:ath:AT2G15580
TAIR:At2g15580 eggNOG:NOG272968 HOGENOM:HOG000084248
InParanoid:Q9ZQF5 OMA:HLPCAHK PhylomeDB:Q9ZQF5
ProtClustDB:CLSN2917126 ArrayExpress:Q9ZQF5 Genevestigator:Q9ZQF5
Uniprot:Q9ZQF5
Length = 196
Score = 127 (49.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 153 QQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
QQ C ICL+ K+G +PC+H +H CL+ WL + CP CR
Sbjct: 147 QQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCR 191
>UNIPROTKB|F1RX76 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:FP102412
Ensembl:ENSSSCT00000017242 Uniprot:F1RX76
Length = 154
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
C +CLE K + +PC H +H+ CLV WL+ +CP+C
Sbjct: 92 CAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 132
>ZFIN|ZDB-GENE-070209-292 [details] [associations]
symbol:rnf126 "ring finger protein 126"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-070209-292
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC133164 IPI:IPI00833462
RefSeq:NP_001076486.1 UniGene:Dr.83792 ProteinModelPortal:A2RV40
SMR:A2RV40 PRIDE:A2RV40 GeneID:100009648 KEGG:dre:100009648
eggNOG:NOG304683 InParanoid:A2RV40 NextBio:20787826 Bgee:A2RV40
Uniprot:A2RV40
Length = 309
Score = 132 (51.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C +C E G ++PC+H++H DC+V WL+ CP+CR LS
Sbjct: 226 CPVCKEDYSAGENVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLS 271
>TAIR|locus:2074567 [details] [associations]
symbol:AT3G02340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC068900 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:BT006207
EMBL:AK227808 IPI:IPI00516786 RefSeq:NP_186883.1 UniGene:At.41149
ProteinModelPortal:Q9FWA5 SMR:Q9FWA5 PaxDb:Q9FWA5
EnsemblPlants:AT3G02340.1 GeneID:821090 KEGG:ath:AT3G02340
TAIR:At3g02340 eggNOG:NOG297375 HOGENOM:HOG000152578
InParanoid:Q9FWA5 OMA:NAINWTA PhylomeDB:Q9FWA5
ProtClustDB:CLSN2685198 Genevestigator:Q9FWA5 Uniprot:Q9FWA5
Length = 409
Score = 133 (51.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C + M K R+PCSH YH +C++ WL + CP+CR++L
Sbjct: 335 CAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYEL 379
>ZFIN|ZDB-GENE-050913-69 [details] [associations]
symbol:rnf11b "ring finger protein 11b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-050913-69
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG058444 EMBL:BC097155 IPI:IPI00897167 UniGene:Dr.106265
ProteinModelPortal:Q4V8X7 InParanoid:Q4V8X7 ArrayExpress:Q4V8X7
Uniprot:Q4V8X7
Length = 154
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGSDGTEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>UNIPROTKB|F1NLF7 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AADN02012583
EMBL:AADN02012584 IPI:IPI00587954 Ensembl:ENSGALT00000017154
Uniprot:F1NLF7
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>UNIPROTKB|F1MFA2 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
IPI:IPI00693096 OMA:DPDQEPP GeneTree:ENSGT00700000104290
EMBL:DAAA02008904 Ensembl:ENSBTAT00000017277 Uniprot:F1MFA2
Length = 115
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 48 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 100
>UNIPROTKB|Q08DI6 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:BC123728 IPI:IPI00693096 RefSeq:NP_001071421.1 UniGene:Bt.6666
ProteinModelPortal:Q08DI6 SMR:Q08DI6 STRING:Q08DI6 PRIDE:Q08DI6
GeneID:522791 KEGG:bta:522791 CTD:26994 HOGENOM:HOG000007448
HOVERGEN:HBG058444 InParanoid:Q08DI6 KO:K11980 OrthoDB:EOG41VK45
NextBio:20873593 Uniprot:Q08DI6
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>UNIPROTKB|F1P8Z8 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AAEX03009717
Ensembl:ENSCAFT00000006260 Uniprot:F1P8Z8
Length = 129
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 62 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 114
>UNIPROTKB|Q9Y3C5 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 EMBL:CH471059
GO:GO:0008270 GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:AL162430 CTD:26994 HOGENOM:HOG000007448 HOVERGEN:HBG058444
KO:K11980 OrthoDB:EOG41VK45 EMBL:AB024703 EMBL:AF151881
EMBL:AK293047 EMBL:AK313140 EMBL:BC020964 EMBL:BC047654
IPI:IPI00003894 RefSeq:NP_055187.1 UniGene:Hs.309641
ProteinModelPortal:Q9Y3C5 SMR:Q9Y3C5 IntAct:Q9Y3C5
MINT:MINT-1180165 STRING:Q9Y3C5 PhosphoSite:Q9Y3C5 DMDM:21362884
PRIDE:Q9Y3C5 DNASU:26994 Ensembl:ENST00000242719 GeneID:26994
KEGG:hsa:26994 UCSC:uc001csi.4 GeneCards:GC01P051701
HGNC:HGNC:10056 HPA:HPA045781 MIM:612598 neXtProt:NX_Q9Y3C5
PharmGKB:PA34420 InParanoid:Q9Y3C5 OMA:DPDQEPP PhylomeDB:Q9Y3C5
ChiTaRS:RNF11 GenomeRNAi:26994 NextBio:49462 Bgee:Q9Y3C5
CleanEx:HS_RNF11 Genevestigator:Q9Y3C5 GermOnline:ENSG00000123091
Uniprot:Q9Y3C5
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>UNIPROTKB|F2Z5G4 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787 KO:K11980
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:CU928826
RefSeq:XP_003482134.1 ProteinModelPortal:F2Z5G4 SMR:F2Z5G4
PRIDE:F2Z5G4 Ensembl:ENSSSCT00000025913 GeneID:100736575
KEGG:ssc:100736575 Uniprot:F2Z5G4
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>MGI|MGI:1352759 [details] [associations]
symbol:Rnf11 "ring finger protein 11" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1352759
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:CH466527 EMBL:AL669905 CTD:26994 HOGENOM:HOG000007448
HOVERGEN:HBG058444 KO:K11980 OrthoDB:EOG41VK45 OMA:DPDQEPP
EMBL:AB024427 EMBL:AF220206 EMBL:BC010299 EMBL:BC028255
IPI:IPI00136284 RefSeq:NP_038904.1 UniGene:Mm.392580
UniGene:Mm.456388 ProteinModelPortal:Q9QYK7 SMR:Q9QYK7
IntAct:Q9QYK7 MINT:MINT-147742 STRING:Q9QYK7 PhosphoSite:Q9QYK7
PaxDb:Q9QYK7 PRIDE:Q9QYK7 Ensembl:ENSMUST00000030284
Ensembl:ENSMUST00000064167 Ensembl:ENSMUST00000145980 GeneID:29864
KEGG:mmu:29864 UCSC:uc008ucm.1 GeneTree:ENSGT00700000104290
InParanoid:B1AU36 NextBio:307078 Bgee:Q9QYK7 CleanEx:MM_RNF11
Genevestigator:Q9QYK7 GermOnline:ENSMUSG00000028557 Uniprot:Q9QYK7
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>RGD|1591050 [details] [associations]
symbol:Rnf11 "ring finger protein 11" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1591050
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000151 GO:GO:0042787 EMBL:CH474008 KO:K11980 IPI:IPI00768552
RefSeq:NP_001258153.1 UniGene:Rn.233481 SMR:D3ZTC2
Ensembl:ENSRNOT00000063848 GeneID:100364162 KEGG:rno:100364162
UCSC:RGD:1591050 Uniprot:D3ZTC2
Length = 154
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 146 PAIEGCSQQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
P +G ++ CVIC+ G +PC HIYH DC+ +WL S CP C
Sbjct: 87 PGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 139
>TAIR|locus:2019150 [details] [associations]
symbol:AT1G74620 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AC011765
eggNOG:NOG308217 IPI:IPI00536550 PIR:C96775 RefSeq:NP_177600.1
UniGene:At.52515 ProteinModelPortal:Q9CA55 SMR:Q9CA55
EnsemblPlants:AT1G74620.1 GeneID:843801 KEGG:ath:AT1G74620
TAIR:At1g74620 InParanoid:Q9CA55 PhylomeDB:Q9CA55
Genevestigator:Q9CA55 Uniprot:Q9CA55
Length = 249
Score = 129 (50.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 156 CVICLEVMKEGSK-AARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C IC+E EGS A++PC H +H DC+ WL+ + +CPLCR
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCR 225
>TAIR|locus:1005452975 [details] [associations]
symbol:RIE1 "RING-finger protein for embryogenesis"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC006069 UniGene:At.47033 UniGene:At.66449
EMBL:AY168924 IPI:IPI00539076 RefSeq:NP_849924.1
ProteinModelPortal:Q8GUU2 SMR:Q8GUU2 EnsemblPlants:AT2G01735.1
GeneID:814703 KEGG:ath:AT2G01735 GeneFarm:3082 TAIR:At2g01735
eggNOG:NOG277561 HOGENOM:HOG000240958 InParanoid:Q8GUU2
PhylomeDB:Q8GUU2 ProtClustDB:CLSN2682050 Genevestigator:Q8GUU2
Uniprot:Q8GUU2
Length = 359
Score = 131 (51.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL ++G++ +PC+H +H C+V WLK + CPLC++ +
Sbjct: 307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>UNIPROTKB|E1BAK9 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:NIHHYLS EMBL:DAAA02063552
IPI:IPI00688216 PRIDE:E1BAK9 Ensembl:ENSBTAT00000006699
Uniprot:E1BAK9
Length = 611
Score = 133 (51.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P C+IC E M G+K R+PC+HI+H CL +W + CP
Sbjct: 270 RNMNTLYPDATPEELQAMDNVCIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCP 327
Query: 195 LCRFQL 200
CR +
Sbjct: 328 TCRMDV 333
>UNIPROTKB|Q86TM6 [details] [associations]
symbol:SYVN1 "E3 ubiquitin-protein ligase synoviolin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;IDA] [GO:0016881
"acid-amino acid ligase activity" evidence=IDA] [GO:0018279
"protein N-linked glycosylation via asparagine" evidence=IMP]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0030968 "endoplasmic
reticulum unfolded protein response" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AB085847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006987 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0016881 eggNOG:COG5243 HOGENOM:HOG000294196
KO:K10601 CTD:84447 HOVERGEN:HBG094015 EMBL:AB024690 EMBL:AF317634
EMBL:AB058713 EMBL:AL834262 EMBL:BC030530 IPI:IPI00166996
IPI:IPI00172510 IPI:IPI00396584 RefSeq:NP_115807.1
RefSeq:NP_757385.1 UniGene:Hs.75859 ProteinModelPortal:Q86TM6
SMR:Q86TM6 IntAct:Q86TM6 MINT:MINT-4052103 STRING:Q86TM6
PhosphoSite:Q86TM6 DMDM:134035039 PaxDb:Q86TM6 PRIDE:Q86TM6
DNASU:84447 Ensembl:ENST00000294256 Ensembl:ENST00000307289
Ensembl:ENST00000377190 Ensembl:ENST00000526060 GeneID:84447
KEGG:hsa:84447 UCSC:uc001odb.3 UCSC:uc001odc.3 UCSC:uc009yqc.3
GeneCards:GC11M064894 HGNC:HGNC:20738 HPA:HPA005480 HPA:HPA024300
MIM:608046 neXtProt:NX_Q86TM6 PharmGKB:PA128394735
InParanoid:Q86TM6 ChiTaRS:SYVN1 GenomeRNAi:84447 NextBio:74217
ArrayExpress:Q86TM6 Bgee:Q86TM6 CleanEx:HS_SYVN1
Genevestigator:Q86TM6 Uniprot:Q86TM6
Length = 617
Score = 133 (51.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P C+IC E M G+K R+PC+HI+H CL +W + CP
Sbjct: 270 RNMNTLYPDATPEELQAMDNVCIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCP 327
Query: 195 LCRFQL 200
CR +
Sbjct: 328 TCRMDV 333
>UNIPROTKB|F6QF09 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:DAAA02060519
IPI:IPI00703726 Ensembl:ENSBTAT00000021827 Uniprot:F6QF09
Length = 146
Score = 114 (45.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
C +CLE + + +PC H +H+ CLV WL+ +CP+C
Sbjct: 84 CAVCLEDFRGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 124
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 114 (45.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
CVIC+ + G +PC HIYH DC+ WL S CP C
Sbjct: 91 CVICMMDFEYGDPIRFLPCMHIYHVDCIDAWLMRSFTCPSC 131
>ZFIN|ZDB-GENE-030131-7166 [details] [associations]
symbol:syvn1 "synovial apoptosis inhibitor 1,
synoviolin" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISS] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-7166 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279 eggNOG:COG5243
HSSP:Q9H0F5 HOGENOM:HOG000294196 KO:K10601 EMBL:BC044465
EMBL:BC066677 IPI:IPI00498211 RefSeq:NP_997900.1 UniGene:Dr.75288
ProteinModelPortal:Q803I8 STRING:Q803I8 GeneID:335226
KEGG:dre:335226 CTD:84447 HOVERGEN:HBG094015 InParanoid:Q803I8
NextBio:20810730 ArrayExpress:Q803I8 Uniprot:Q803I8
Length = 625
Score = 133 (51.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P + C+IC E M G+K ++PC+HI+H CL +W + CP
Sbjct: 270 RNMNTLYPDATPEDLQATDNVCIICREEMVTGAK--KLPCNHIFHSSCLRSWFQRQQTCP 327
Query: 195 LCRFQL 200
CR +
Sbjct: 328 TCRMDV 333
>UNIPROTKB|E2RSJ2 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:RTPTVNS EMBL:AAEX03011641
Ensembl:ENSCAFT00000022084 Uniprot:E2RSJ2
Length = 776
Score = 133 (51.9 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P C+IC E M G+K R+PC+HI+H CL +W + CP
Sbjct: 435 RNMNTLYPDATPEELQAMDNVCIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCP 492
Query: 195 LCRFQL 200
CR +
Sbjct: 493 TCRMDV 498
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 124 (48.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C+ + C +C E G ++PC+H +H DC+V WL+ CP+CR L+
Sbjct: 234 CNME-CPVCKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLN 283
Score = 36 (17.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 145 APAIEGCSQQY 155
+PA+EG QQ+
Sbjct: 149 SPAVEGIVQQF 159
>MGI|MGI:1921376 [details] [associations]
symbol:Syvn1 "synovial apoptosis inhibitor 1, synoviolin"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0006986 "response to unfolded protein" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=ISO] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1921376 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005634 GO:GO:0043066
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0004842 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0000151 GO:GO:0006986
HOGENOM:HOG000294196 KO:K10601 CTD:84447 HOVERGEN:HBG094015
ChiTaRS:SYVN1 EMBL:AK122558 EMBL:AK004688 EMBL:BC042199
EMBL:BC046829 EMBL:BC057917 EMBL:BC080722 IPI:IPI00387479
IPI:IPI01008384 RefSeq:NP_001158181.1 RefSeq:NP_083045.4
UniGene:Mm.149870 ProteinModelPortal:Q9DBY1 SMR:Q9DBY1
IntAct:Q9DBY1 MINT:MINT-1662447 STRING:Q9DBY1 PhosphoSite:Q9DBY1
PaxDb:Q9DBY1 PRIDE:Q9DBY1 Ensembl:ENSMUST00000134667
Ensembl:ENSMUST00000138532 GeneID:74126 KEGG:mmu:74126
UCSC:uc008ggm.2 InParanoid:Q9DBY1 NextBio:339846 Bgee:Q9DBY1
CleanEx:MM_SYVN1 Genevestigator:Q9DBY1 Uniprot:Q9DBY1
Length = 612
Score = 132 (51.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P C+IC E M G+K R+PC+HI+H CL +W + CP
Sbjct: 270 RNMNTLYPDATPEELQAVDNVCIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCP 327
Query: 195 LCRFQL 200
CR +
Sbjct: 328 TCRMDV 333
>TAIR|locus:1006230720 [details] [associations]
symbol:AT1G24580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K16285
ProtClustDB:CLSN2681281 EMBL:BT014952 EMBL:BT020604 IPI:IPI00542297
RefSeq:NP_973908.1 UniGene:At.49461 ProteinModelPortal:Q6GKW2
SMR:Q6GKW2 EnsemblPlants:AT1G24580.1 GeneID:2745762
KEGG:ath:AT1G24580 eggNOG:NOG279711 OMA:FQIVASE
Genevestigator:Q6GKW2 Uniprot:Q6GKW2
Length = 113
Score = 112 (44.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 133 VTRSIN-TQVLKLAPAIEGCSQQY---CVICLEVMKEGSKAARM-PCSHIYHQDCLVNWL 187
VTR I+ TQ L IE ++ C +CL KE + + + C H +H+ CL NW
Sbjct: 40 VTRRISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWF 99
Query: 188 KNS-SLCPLCR 197
N+ + CPLCR
Sbjct: 100 GNNHTTCPLCR 110
>TAIR|locus:2056765 [details] [associations]
symbol:AT2G03000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:AC004138 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 eggNOG:KOG0800 IPI:IPI00548277 PIR:B84443
RefSeq:NP_178400.1 UniGene:At.52609 ProteinModelPortal:O80614
SMR:O80614 EnsemblPlants:AT2G03000.1 GeneID:814829
KEGG:ath:AT2G03000 TAIR:At2g03000 InParanoid:O80614
Genevestigator:O80614 Uniprot:O80614
Length = 535
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 140 QVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQ 199
+ + + P + + CVIC E + +PC H YH +C+ WLK + CP CR++
Sbjct: 465 RAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYK 524
Query: 200 LS 201
LS
Sbjct: 525 LS 526
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 523 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 564
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 539 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 580
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 543 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 584
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 587
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 590
>FB|FBgn0037653 [details] [associations]
symbol:CG11982 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 eggNOG:NOG235630 KO:K11982
EMBL:AY052007 RefSeq:NP_649859.1 UniGene:Dm.4413 SMR:Q9VHI7
IntAct:Q9VHI7 MINT:MINT-313564 EnsemblMetazoa:FBtr0081965
GeneID:41080 KEGG:dme:Dmel_CG11982 UCSC:CG11982-RA
FlyBase:FBgn0037653 InParanoid:Q9VHI7 OMA:EILISVA OrthoDB:EOG4B8GVJ
GenomeRNAi:41080 NextBio:822051 Uniprot:Q9VHI7
Length = 380
Score = 129 (50.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C IC + K ++PCSH+YH++C+V WL S CP+CR L+
Sbjct: 253 CSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLA 298
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 598
>TAIR|locus:2185108 [details] [associations]
symbol:AT5G01980 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AL162508 UniGene:At.28192 EMBL:BT021990
EMBL:BT029027 IPI:IPI00522214 PIR:T48219 RefSeq:NP_195818.1
ProteinModelPortal:Q9LZN3 SMR:Q9LZN3 EnsemblPlants:AT5G01980.1
GeneID:831911 KEGG:ath:AT5G01980 TAIR:At5g01980
HOGENOM:HOG000077556 InParanoid:Q9LZN3 OMA:CAICKEL PhylomeDB:Q9LZN3
ProtClustDB:CLSN2687301 Genevestigator:Q9LZN3 Uniprot:Q9LZN3
Length = 493
Score = 130 (50.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C IC E+ ++ ++PC H+YH C+V WL + CPLCR++L
Sbjct: 350 CAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYEL 394
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 569 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 610
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 612
>TAIR|locus:2010582 [details] [associations]
symbol:AT1G04790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AY054498
EMBL:BT008404 IPI:IPI00529141 RefSeq:NP_563717.1 UniGene:At.42430
UniGene:At.66861 ProteinModelPortal:Q93XZ6 SMR:Q93XZ6 PRIDE:Q93XZ6
EnsemblPlants:AT1G04790.1 GeneID:839412 KEGG:ath:AT1G04790
TAIR:At1g04790 eggNOG:NOG249140 HOGENOM:HOG000090534
InParanoid:Q93XZ6 OMA:GPRRVEN PhylomeDB:Q93XZ6
ProtClustDB:CLSN2916965 Genevestigator:Q93XZ6 Uniprot:Q93XZ6
Length = 634
Score = 131 (51.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 153 QQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
Q+ CVICLE K G +PC H +H+DC+ WL S CP+C+
Sbjct: 586 QETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCK 630
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 131 (51.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 626
>ZFIN|ZDB-GENE-081104-369 [details] [associations]
symbol:rnf165b "ring finger protein 165b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-081104-369 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CABZ01049924 EMBL:CT573450 IPI:IPI00890535 RefSeq:XP_701217.3
UniGene:Dr.65572 Ensembl:ENSDART00000109989 GeneID:572413
KEGG:dre:572413 CTD:572413 NextBio:20890947 Uniprot:F1R351
Length = 347
Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+ + C ICL ++++ R+PC H++HQ C+ WL + CP+CR +
Sbjct: 291 TDEKCTICLSMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDI 339
>TAIR|locus:2095542 [details] [associations]
symbol:AT3G28620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AP000420 HOGENOM:HOG000131725 eggNOG:NOG326307
ProtClustDB:CLSN2683040 IPI:IPI00539917 RefSeq:NP_189503.1
UniGene:At.50234 ProteinModelPortal:Q9LJJ3 SMR:Q9LJJ3 DNASU:822492
EnsemblPlants:AT3G28620.1 GeneID:822492 KEGG:ath:AT3G28620
TAIR:At3g28620 InParanoid:Q9LJJ3 OMA:EDYCEMP PhylomeDB:Q9LJJ3
Genevestigator:Q9LJJ3 Uniprot:Q9LJJ3
Length = 211
Score = 116 (45.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWL-KNSSLCPLCR 197
C ICLE + MP CSH +H+ CL WL ++++ CPLCR
Sbjct: 160 CAICLENLLRSEDYCEMPTCSHYFHEPCLTEWLTRDNNSCPLCR 203
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 17 PEDDDLIQSTHDHEAIFSLHLFSATPNIMNKNL 49
PED S+ H+ + SL L S PN + + L
Sbjct: 54 PED-----SSTSHDPLISLKLPSFKPNDVYQRL 81
>FB|FBgn0026878 [details] [associations]
symbol:CG4325 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002805
"regulation of antimicrobial peptide biosynthetic process"
evidence=IMP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 EMBL:AE014298 GO:GO:0008270
EMBL:AL031765 ChiTaRS:Actn Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0002805 EMBL:BT132862 PIR:T13738 RefSeq:NP_569969.1
SMR:Q9XZS4 DIP:DIP-17855N IntAct:Q9XZS4 MINT:MINT-343565
EnsemblMetazoa:FBtr0070342 EnsemblMetazoa:FBtr0310443 GeneID:31167
KEGG:dme:Dmel_CG4325 UCSC:CG4325-RA FlyBase:FBgn0026878
InParanoid:Q9XZS4 OMA:CTICSER OrthoDB:EOG479CQF GenomeRNAi:31167
NextBio:772261 Uniprot:Q9XZS4
Length = 158
Score = 114 (45.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 150 GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQ 199
G + C IC E + C H +H+DCL +W K S CP+CR Q
Sbjct: 2 GRNNVICTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQ 51
>RGD|1306645 [details] [associations]
symbol:Znrf2 "zinc and ring finger 2" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
IPI:IPI00358216 Ensembl:ENSRNOT00000051594 UCSC:RGD:1306645
RGD:1306645 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR001841 InterPro:IPR013083 Pfam:PF13639 SMART:SM00184
PROSITE:PS50089 Uniprot:D3ZRF2
Length = 71
Score = 110 (43.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
C ICLE +++G AR+PC IYH+ C+ W + + CP
Sbjct: 28 CAICLEELQQGDTIARLPCLCIYHKGCIDEWFEVNRSCP 66
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 130 (50.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 609
>TAIR|locus:2118651 [details] [associations]
symbol:AT4G30370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161576
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 HOGENOM:HOG000237642 EMBL:AF160182 EMBL:AK118932
EMBL:BT005549 IPI:IPI00529274 PIR:B85355 RefSeq:NP_194766.1
UniGene:At.31839 UniGene:At.69303 UniGene:At.75149
ProteinModelPortal:Q9M0C3 SMR:Q9M0C3 EnsemblPlants:AT4G30370.1
GeneID:829160 KEGG:ath:AT4G30370 TAIR:At4g30370 eggNOG:NOG242482
InParanoid:Q9M0C3 OMA:PPPKANT PhylomeDB:Q9M0C3
ProtClustDB:CLSN2683055 Genevestigator:Q9M0C3 Uniprot:Q9M0C3
Length = 176
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 137 INTQVLKLAPAIEGC--SQQY----CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKN 189
++ + +K P + C S +Y CV+C++ ++G ++P C H++H+ C+ WL
Sbjct: 90 LSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIK 149
Query: 190 SSLCPLCR 197
S CP+CR
Sbjct: 150 VSTCPICR 157
>UNIPROTKB|Q7T037 [details] [associations]
symbol:rnf12-b "E3 ubiquitin-protein ligase RNF12-B"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
EMBL:AB114040 RefSeq:NP_001108244.1 UniGene:Xl.81512
ProteinModelPortal:Q7T037 GeneID:100137618 KEGG:xla:100137618
CTD:100137618 Xenbase:XB-GENE-6256130 Uniprot:Q7T037
Length = 757
Score = 130 (50.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C+ EG+K ++PCSH YH C+ WL +S CP+CR
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 744
>WB|WBGene00022115 [details] [associations]
symbol:Y71F9AL.10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:FO081777 GeneTree:ENSGT00390000013068 KO:K10694
HOGENOM:HOG000285998 eggNOG:NOG291512 RefSeq:NP_491059.2
ProteinModelPortal:Q9N4I6 SMR:Q9N4I6 PaxDb:Q9N4I6
EnsemblMetazoa:Y71F9AL.10.1 EnsemblMetazoa:Y71F9AL.10.2
GeneID:171852 KEGG:cel:CELE_Y71F9AL.10 UCSC:Y71F9AL.10 CTD:171852
WormBase:Y71F9AL.10 InParanoid:Q9N4I6 OMA:AGHKIAR NextBio:872971
Uniprot:Q9N4I6
Length = 189
Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
C ICLE ++ G K AR+PC IYH+ C+ +W K + CP
Sbjct: 145 CSICLEDLEAGHKIARLPCLCIYHKQCIDDWFKRKNCCP 183
>TAIR|locus:2118071 [details] [associations]
symbol:AT4G12150 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL049638 EMBL:AL161533
eggNOG:KOG0802 IPI:IPI00527480 PIR:T06622 RefSeq:NP_192952.1
UniGene:At.51386 ProteinModelPortal:Q9SZ80 SMR:Q9SZ80 PRIDE:Q9SZ80
DNASU:826823 EnsemblPlants:AT4G12150.1 GeneID:826823
KEGG:ath:AT4G12150 TAIR:At4g12150 InParanoid:Q9SZ80
PhylomeDB:Q9SZ80 Genevestigator:Q9SZ80 Uniprot:Q9SZ80
Length = 357
Score = 126 (49.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 156 CVICLEVMKEGSKAA--RMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL+ + SK A RM CSH++H CLV WL + CP+ QL
Sbjct: 153 CSICLQSLVSSSKTAPTRMSCSHVFHNGCLVEWLNRKNTCPMFHMQL 199
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 108 (43.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 19/49 (38%), Positives = 22/49 (44%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
E Q+ C IC G +PC H YH C+ WL S CP CR
Sbjct: 79 EKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCR 127
>UNIPROTKB|F1SIH0 [details] [associations]
symbol:ZNRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000013068 EMBL:CU928276
Ensembl:ENSSSCT00000018161 OMA:VICFEDL Uniprot:F1SIH0
Length = 88
Score = 108 (43.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
C ICLE +++G AR+PC IYH+ C+ W + + CP
Sbjct: 45 CSICLEELQQGDTIARLPCLCIYHKGCIDEWFEVNRSCP 83
>TAIR|locus:2195871 [details] [associations]
symbol:AT1G51930 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015124 EMBL:BT015636
IPI:IPI00533509 RefSeq:NP_175605.1 UniGene:At.64866
ProteinModelPortal:Q6AWX4 SMR:Q6AWX4 EnsemblPlants:AT1G51930.1
GeneID:841621 KEGG:ath:AT1G51930 TAIR:At1g51930 eggNOG:NOG294426
HOGENOM:HOG000141530 InParanoid:Q6AWX4 OMA:EEYEDDH PhylomeDB:Q6AWX4
ProtClustDB:CLSN2914693 Genevestigator:Q6AWX4 Uniprot:Q6AWX4
Length = 132
Score = 108 (43.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
EG +++C ICLE ++ + R+ C H++H C+ +WL CP CR
Sbjct: 73 EGGGKRFCPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCR 122
>TAIR|locus:2197026 [details] [associations]
symbol:AT1G53820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000034162 ProtClustDB:CLSN2715378 EMBL:AC009324
EMBL:DQ056496 IPI:IPI00517219 RefSeq:NP_175785.1 UniGene:At.52187
ProteinModelPortal:P0C035 SMR:P0C035 PRIDE:P0C035
EnsemblPlants:AT1G53820.1 GeneID:841819 KEGG:ath:AT1G53820
TAIR:At1g53820 InParanoid:P0C035 OMA:IDEEEPK PhylomeDB:P0C035
Genevestigator:P0C035 GermOnline:AT1G53820 Uniprot:P0C035
Length = 310
Score = 125 (49.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSS 191
+ +SI+ V K +G C +CL + +G KA +P C+H +H DC+ W ++ S
Sbjct: 100 ILQSIHVVVFKCTDFKDGLE---CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHS 156
Query: 192 LCPLCR 197
CPLCR
Sbjct: 157 TCPLCR 162
>UNIPROTKB|F1P1C1 [details] [associations]
symbol:ZNRF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:AADN02062005 IPI:IPI00577812 Ensembl:ENSGALT00000034974
Uniprot:F1P1C1
Length = 279
Score = 124 (48.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 138 NTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS---LCP 194
N + +KL +G + CVIC+ KEG +PCSH YH C+ W S CP
Sbjct: 214 NARKIKLYTYRQGDQYETCVICMSEYKEGDLLKILPCSHTYHHLCIDTWFDTQSRKKTCP 273
Query: 195 LCRFQL 200
C+ Q+
Sbjct: 274 FCKQQV 279
>UNIPROTKB|F1NMT7 [details] [associations]
symbol:ZNRF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:AADN02062005 IPI:IPI00818039 Ensembl:ENSGALT00000040789
Uniprot:F1NMT7
Length = 285
Score = 124 (48.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 138 NTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS---LCP 194
N + +KL +G + CVIC+ KEG +PCSH YH C+ W S CP
Sbjct: 220 NARKIKLYTYRQGDQYETCVICMSEYKEGDLLKILPCSHTYHHLCIDTWFDTQSRKKTCP 279
Query: 195 LCRFQL 200
C+ Q+
Sbjct: 280 FCKQQV 285
>UNIPROTKB|F1NTR6 [details] [associations]
symbol:ZNRF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00700000104226 OMA:EDYKDGE
EMBL:AADN02062005 IPI:IPI00818734 Ensembl:ENSGALT00000040791
Uniprot:F1NTR6
Length = 286
Score = 124 (48.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 138 NTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS---LCP 194
N + +KL +G + CVIC+ KEG +PCSH YH C+ W S CP
Sbjct: 221 NARKIKLYTYRQGDQYETCVICMSEYKEGDLLKILPCSHTYHHLCIDTWFDTQSRKKTCP 280
Query: 195 LCRFQL 200
C+ Q+
Sbjct: 281 FCKQQV 286
>UNIPROTKB|Q5XHH7 [details] [associations]
symbol:syvn1-b "E3 ubiquitin-protein ligase synoviolin B"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC084080
RefSeq:NP_001088172.1 UniGene:Xl.64351 ProteinModelPortal:Q5XHH7
GeneID:494996 KEGG:xla:494996 CTD:494996 Xenbase:XB-GENE-6254740
Uniprot:Q5XHH7
Length = 595
Score = 128 (50.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C+IC E M G+K R+PC+HI+H CL +W + CP CR +
Sbjct: 285 CIICREEMVSGAK--RLPCNHIFHTSCLRSWFQRQQTCPTCRMDV 327
>TAIR|locus:2177876 [details] [associations]
symbol:AT5G41440 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:KOG0800 EMBL:AB006707
HOGENOM:HOG000141530 IPI:IPI00532498 RefSeq:NP_198959.1
UniGene:At.65617 ProteinModelPortal:Q9FN57 SMR:Q9FN57
EnsemblPlants:AT5G41440.1 GeneID:834145 KEGG:ath:AT5G41440
TAIR:At5g41440 InParanoid:Q9FN57 PhylomeDB:Q9FN57
Genevestigator:Q9FN57 Uniprot:Q9FN57
Length = 124
Score = 107 (42.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 141 VLKLAPAIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
++K+ EG + C ICLE K G + + C H++H+ C+++W+ + CP+CR
Sbjct: 64 IIKVEDVEEG-DEGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICR 120
>TAIR|locus:2201158 [details] [associations]
symbol:AT1G21960 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:COG5540 EMBL:AC013482 HOGENOM:HOG000152571 IPI:IPI00517609
RefSeq:NP_173615.1 UniGene:At.51714 ProteinModelPortal:Q9SFD9
SMR:Q9SFD9 EnsemblPlants:AT1G21960.1 GeneID:838799
KEGG:ath:AT1G21960 TAIR:At1g21960 InParanoid:Q9SFD9 OMA:FKICVSA
PhylomeDB:Q9SFD9 ProtClustDB:CLSN2914300 Genevestigator:Q9SFD9
Uniprot:Q9SFD9
Length = 204
Score = 120 (47.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICLE ++G +PC H + C+ W +CPLCRF+L
Sbjct: 158 CTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFLKDHVCPLCRFEL 202
>UNIPROTKB|F1P1R5 [details] [associations]
symbol:RNF103 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005783 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 OMA:GKVHWEK
GeneTree:ENSGT00390000006413 EMBL:AADN02014773 IPI:IPI00579834
Ensembl:ENSGALT00000025489 Uniprot:F1P1R5
Length = 684
Score = 128 (50.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 146 PAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
P + C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 612 PEMLHCTE--CVVCLENFERGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 663
>TAIR|locus:2176436 [details] [associations]
symbol:AT5G43420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025638 UniGene:At.7156 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:BT008334 IPI:IPI00524721
RefSeq:NP_199155.1 UniGene:At.30118 ProteinModelPortal:Q9LSW9
SMR:Q9LSW9 PaxDb:Q9LSW9 EnsemblPlants:AT5G43420.1 GeneID:834362
KEGG:ath:AT5G43420 TAIR:At5g43420 HOGENOM:HOG000034161
InParanoid:Q9LSW9 OMA:PIFKFKK PhylomeDB:Q9LSW9
ProtClustDB:CLSN2681784 Genevestigator:Q9LSW9 Uniprot:Q9LSW9
Length = 375
Score = 125 (49.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 154 QYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
Q C +CL ++ K +P CSH++H DC+ WL+N++ CPLCR ++S
Sbjct: 136 QECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
>TAIR|locus:504955576 [details] [associations]
symbol:BB "BIG BROTHER" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0046621 "negative regulation of organ growth"
evidence=IMP] [GO:0048437 "floral organ development" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048437 GO:GO:0004842
GO:GO:0046621 GO:GO:0051865 HOGENOM:HOG000239779 EMBL:AL732522
EMBL:BT010197 EMBL:AK318710 EMBL:AK227673 IPI:IPI00538123
IPI:IPI00969304 RefSeq:NP_001030922.1 RefSeq:NP_680148.1
UniGene:At.44049 HSSP:P28990 ProteinModelPortal:Q8L649 SMR:Q8L649
EnsemblPlants:AT3G63530.1 EnsemblPlants:AT3G63530.2 GeneID:825528
KEGG:ath:AT3G63530 TAIR:At3g63530 eggNOG:NOG327333
InParanoid:Q8L649 OMA:SINKVCP PhylomeDB:Q8L649
ProtClustDB:CLSN2690625 Genevestigator:Q8L649 Uniprot:Q8L649
Length = 248
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
CVIC K G + +PC H+YH +C+ WL + +CP+C ++
Sbjct: 197 CVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>WB|WBGene00004768 [details] [associations]
symbol:sel-11 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008593 "regulation of Notch
signaling pathway" evidence=IGI] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0035264 HSSP:Q9LRB7 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0010468 GO:GO:0008593
EMBL:Z72511 PIR:T22687 RefSeq:NP_505969.1 ProteinModelPortal:Q20798
SMR:Q20798 DIP:DIP-26690N IntAct:Q20798 MINT:MINT-212290
STRING:Q20798 PaxDb:Q20798 EnsemblMetazoa:F55A11.3.1
EnsemblMetazoa:F55A11.3.2 GeneID:179612 KEGG:cel:CELE_F55A11.3
UCSC:F55A11.3 CTD:179612 WormBase:F55A11.3 HOGENOM:HOG000294196
InParanoid:Q20798 KO:K10601 OMA:NIHHYLS NextBio:906150
Uniprot:Q20798
Length = 610
Score = 124 (48.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C+IC E M + R+PCSH++H CL +W + CP CR
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 56 LLGG-CAYWSANLSRCLSALNVAFHAHPSIIYKITSYAHSA 95
++GG C +A + L+A + +PSI+Y S A A
Sbjct: 8 MIGGSCVATAATI---LNAFLINKQFYPSIVYLSKSNASMA 45
>UNIPROTKB|Q6NRL6 [details] [associations]
symbol:syvn1-a "E3 ubiquitin-protein ligase synoviolin A"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC070731
RefSeq:NP_001084825.1 UniGene:Xl.18945 ProteinModelPortal:Q6NRL6
GeneID:431869 KEGG:xla:431869 CTD:431869 Xenbase:XB-GENE-1005365
Uniprot:Q6NRL6
Length = 605
Score = 127 (49.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C+IC E M G+K R+PC+HI+H CL +W + CP CR +
Sbjct: 285 CIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCPTCRMDV 327
>UNIPROTKB|I3LGG8 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 KO:K10601 OMA:NIHHYLS CTD:84447
EMBL:CU457406 RefSeq:XP_003122589.1 UniGene:Ssc.53723
Ensembl:ENSSSCT00000027683 GeneID:100514334 KEGG:ssc:100514334
Uniprot:I3LGG8
Length = 610
Score = 127 (49.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C+IC E M G+K R+PC+HI+H CL +W + CP CR +
Sbjct: 291 CIICREEMVTGAK--RLPCNHIFHTSCLRSWFQRQQTCPTCRMDV 333
>TAIR|locus:2057861 [details] [associations]
symbol:AT2G27940 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC006929
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AK118539
EMBL:BT005256 IPI:IPI00522216 PIR:G84678 RefSeq:NP_180361.1
UniGene:At.38697 ProteinModelPortal:Q9SJJ7 SMR:Q9SJJ7 IntAct:Q9SJJ7
EnsemblPlants:AT2G27940.1 GeneID:817338 KEGG:ath:AT2G27940
TAIR:At2g27940 eggNOG:NOG262125 HOGENOM:HOG000034166
InParanoid:Q9SJJ7 OMA:TVKVIPH PhylomeDB:Q9SJJ7
ProtClustDB:CLSN2683534 Genevestigator:Q9SJJ7 GermOnline:AT2G27940
Uniprot:Q9SJJ7
Length = 237
Score = 121 (47.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 135 RSINTQVLKLAPAI---EGCSQQY--CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLK 188
R +++Q ++ P + Q+ CVICL +EG +P C H++H DC+ WL
Sbjct: 114 RGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 189 NSSLCPLCR 197
+ CPLCR
Sbjct: 174 SYVTCPLCR 182
>UNIPROTKB|F1P4J2 [details] [associations]
symbol:ZNRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0043161 GO:GO:0046872 GO:GO:0005768 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936
GeneTree:ENSGT00390000013068 EMBL:AADN02051574 EMBL:AADN02051575
EMBL:AADN02051576 EMBL:AADN02051577 IPI:IPI00587354
Ensembl:ENSGALT00000008346 OMA:DALMCAV Uniprot:F1P4J2
Length = 84
Score = 106 (42.4 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
CVICLE + +G AR+PC IYH+ C+ +W + + CP
Sbjct: 42 CVICLEELLQGD-TARLPCLCIYHKSCIDSWFEVNRSCP 79
>TAIR|locus:1006230202 [details] [associations]
symbol:AT3G51325 "AT3G51325" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL132980
EMBL:BT024629 EMBL:AK229345 IPI:IPI00523157 RefSeq:NP_974410.1
UniGene:At.47960 ProteinModelPortal:Q3E7K1 SMR:Q3E7K1
EnsemblPlants:AT3G51325.1 GeneID:2745959 KEGG:ath:AT3G51325
TAIR:At3g51325 eggNOG:NOG267143 InParanoid:Q3E7K1 OMA:GREEECC
PhylomeDB:Q3E7K1 ProtClustDB:CLSN2915205 Genevestigator:Q3E7K1
Uniprot:Q3E7K1
Length = 90
Score = 106 (42.4 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS--LCPLCRF 198
EG ++ C +CL M+ +PCSH +H C+ W S CPLCRF
Sbjct: 19 EGREEECCSVCLMRMEAKDVIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRF 70
>TAIR|locus:2053994 [details] [associations]
symbol:AT2G18670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2683055 EMBL:AC005724
EMBL:DQ059107 EMBL:AY052699 EMBL:AY098955 EMBL:AY088712
IPI:IPI00522502 PIR:B84567 RefSeq:NP_179457.1 UniGene:At.13211
UniGene:At.69600 UniGene:At.73918 ProteinModelPortal:Q9ZV51
SMR:Q9ZV51 EnsemblPlants:AT2G18670.1 GeneID:816382
KEGG:ath:AT2G18670 TAIR:At2g18670 eggNOG:NOG270264
InParanoid:Q9ZV51 OMA:YRISGEP PhylomeDB:Q9ZV51
Genevestigator:Q9ZV51 Uniprot:Q9ZV51
Length = 181
Score = 117 (46.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
CV+C + ++G +P C H++H+ C+ WL +S CP+CR
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICR 152
>TAIR|locus:2053776 [details] [associations]
symbol:AT2G42350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005956
EMBL:BT010853 EMBL:BT011323 IPI:IPI00542284 PIR:H84852
RefSeq:NP_181764.1 UniGene:At.42716 ProteinModelPortal:Q9SLC4
SMR:Q9SLC4 EnsemblPlants:AT2G42350.1 GeneID:818836
KEGG:ath:AT2G42350 TAIR:At2g42350 eggNOG:NOG298426
HOGENOM:HOG000034168 InParanoid:Q9SLC4 OMA:VAGTECA PhylomeDB:Q9SLC4
ProtClustDB:CLSN2683918 Genevestigator:Q9SLC4 GermOnline:AT2G42350
Uniprot:Q9SLC4
Length = 217
Score = 120 (47.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 133 VTRSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSS 191
V S+ T V+ + + G C +CL +++E A +P C H++H C+ WL S
Sbjct: 80 VIASLPTFVVGIKNDVAGTE---CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQS 136
Query: 192 LCPLCR 197
CP+CR
Sbjct: 137 TCPVCR 142
>DICTYBASE|DDB_G0278501 [details] [associations]
symbol:DDB_G0278501 "C3HC4 type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0278501 GO:GO:0046872
EMBL:AAFI02000023 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 RefSeq:XP_642403.1
ProteinModelPortal:Q54XZ9 EnsemblProtists:DDB0205494 GeneID:8621608
KEGG:ddi:DDB_G0278501 InParanoid:Q54XZ9 OMA:ISIFYLR Uniprot:Q54XZ9
Length = 666
Score = 127 (49.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 154 QYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
Q CVIC+ ++EG K C+H++H+ CL+ WL+ + CP CR ++
Sbjct: 615 QGCVICMSDVEEGQKYMLTECNHLFHEKCLLQWLEFKAQCPTCRSEI 661
>ZFIN|ZDB-GENE-100209-1 [details] [associations]
symbol:rnf6 "ring finger protein (C3H2C3 type) 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-100209-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AL929009 IPI:IPI00902140
Ensembl:ENSDART00000109587 Uniprot:F1R4P2
Length = 734
Score = 127 (49.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
+EG + C +C+ +G+K R+PC+H +H C+ WL ++ CP+CR
Sbjct: 676 LEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICR 725
>TAIR|locus:505006341 [details] [associations]
symbol:AT3G13228 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AB024034
IPI:IPI00535152 RefSeq:NP_566449.1 UniGene:At.39459
ProteinModelPortal:Q9LTU8 SMR:Q9LTU8 PRIDE:Q9LTU8
EnsemblPlants:AT3G13228.1 GeneID:820519 KEGG:ath:AT3G13228
TAIR:At3g13228 InParanoid:Q9LTU8 OMA:DDECAVK PhylomeDB:Q9LTU8
ProtClustDB:CLSN2914983 Genevestigator:Q9LTU8 Uniprot:Q9LTU8
Length = 325
Score = 123 (48.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICLE G +PC H + +C V W + + CPLCR++L
Sbjct: 275 CTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYEL 319
>UNIPROTKB|K7GLV3 [details] [associations]
symbol:LOC100519085 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU407202 EMBL:CU424450 Ensembl:ENSSSCT00000032920
Uniprot:K7GLV3
Length = 138
Score = 105 (42.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C +C+E K +PC HI+H+ C+ WL + CP+C+ +
Sbjct: 9 CAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDV 53
>FB|FBgn0039875 [details] [associations]
symbol:sip3 "septin interacting protein 3" species:7227
"Drosophila melanogaster" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IGI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 EMBL:AE014297 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 eggNOG:COG5243 GO:GO:0030968
GeneTree:ENSGT00530000062938 KO:K10601 EMBL:AY060677
RefSeq:NP_651894.3 UniGene:Dm.1395 ProteinModelPortal:Q95SP2
SMR:Q95SP2 MINT:MINT-990774 STRING:Q95SP2 PaxDb:Q95SP2 PRIDE:Q95SP2
EnsemblMetazoa:FBtr0085842 EnsemblMetazoa:FBtr0330113 GeneID:43747
KEGG:dme:Dmel_CG1937 FlyBase:FBgn0039875 InParanoid:Q95SP2
OMA:RTPTVNS OrthoDB:EOG4NK9B2 PhylomeDB:Q95SP2 ChiTaRS:sip3
GenomeRNAi:43747 NextBio:835578 Bgee:Q95SP2 Uniprot:Q95SP2
Length = 626
Score = 126 (49.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 135 RSINTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
R++NT P S C+IC E M SK ++PC HI+H CL +W + CP
Sbjct: 268 RNMNTLYPDATPEELRQSDNICIICREDMVNHSK--KLPCGHIFHTTCLRSWFQRQQTCP 325
Query: 195 LCRFQL 200
CR +
Sbjct: 326 TCRLNI 331
>UNIPROTKB|J9NV71 [details] [associations]
symbol:LOC491808 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00700000104290 OMA:SICITEY
EMBL:AAEX03026256 RefSeq:XP_855008.1 ProteinModelPortal:J9NV71
Ensembl:ENSCAFT00000045760 GeneID:491808 KEGG:cfa:491808
Uniprot:J9NV71
Length = 625
Score = 124 (48.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C IC+ EG++ +PCSH +H C+ +WL +S CP+CR Q+
Sbjct: 571 CSICITEYTEGNRLRILPCSHEFHVHCIDHWLSENSTCPICRGQV 615
Score = 36 (17.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 39 SATPNIMNKNLIVLQQDL 56
S+ PN MN+ L+ Q++
Sbjct: 224 SSAPNSMNECLLRFHQNI 241
>RGD|620586 [details] [associations]
symbol:Rnf103 "ring finger protein 103" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=ISO;ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:620586 Prosite:PS00518 GO:GO:0005783
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000006578 HOVERGEN:HBG054144 EMBL:AF306394
IPI:IPI00389335 UniGene:Rn.45685 ProteinModelPortal:Q9EPZ8
STRING:Q9EPZ8 UCSC:RGD:620586 InParanoid:Q9EPZ8 ArrayExpress:Q9EPZ8
Genevestigator:Q9EPZ8 GermOnline:ENSRNOG00000007272 Uniprot:Q9EPZ8
Length = 682
Score = 126 (49.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 615 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 661
>UNIPROTKB|F1LNY7 [details] [associations]
symbol:Rnf103 "E3 ubiquitin-protein ligase RNF103"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:620586 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00390000006413 IPI:IPI00949655
Ensembl:ENSRNOT00000064374 ArrayExpress:F1LNY7 Uniprot:F1LNY7
Length = 682
Score = 126 (49.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 615 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 661
>UNIPROTKB|Q9EPZ8 [details] [associations]
symbol:Rnf103 "E3 ubiquitin-protein ligase RNF103"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:620586 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 HOGENOM:HOG000006578 HOVERGEN:HBG054144 EMBL:AF306394
IPI:IPI00389335 UniGene:Rn.45685 ProteinModelPortal:Q9EPZ8
STRING:Q9EPZ8 UCSC:RGD:620586 InParanoid:Q9EPZ8 ArrayExpress:Q9EPZ8
Genevestigator:Q9EPZ8 GermOnline:ENSRNOG00000007272 Uniprot:Q9EPZ8
Length = 682
Score = 126 (49.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 615 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 661
>MGI|MGI:109483 [details] [associations]
symbol:Rnf103 "ring finger protein 103" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:109483 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
eggNOG:COG5540 GO:GO:0004842 CTD:7844 HOGENOM:HOG000006578
HOVERGEN:HBG054144 KO:K15695 OMA:GKVHWEK OrthoDB:EOG4Q58NV
EMBL:D76445 EMBL:AB012161 EMBL:BC137624 IPI:IPI00460125 PIR:JC5393
RefSeq:NP_033569.2 UniGene:Mm.422969 ProteinModelPortal:Q9R1W3
SMR:Q9R1W3 STRING:Q9R1W3 PhosphoSite:Q9R1W3 PRIDE:Q9R1W3
Ensembl:ENSMUST00000064637 Ensembl:ENSMUST00000114179 GeneID:22644
KEGG:mmu:22644 GeneTree:ENSGT00390000006413 InParanoid:Q9R1W3
ChiTaRS:RNF103 NextBio:303043 Bgee:Q9R1W3 CleanEx:MM_RNF103
Genevestigator:Q9R1W3 GermOnline:ENSMUSG00000052656 Uniprot:Q9R1W3
Length = 683
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 616 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 662
>TAIR|locus:2199902 [details] [associations]
symbol:AT1G23980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC002423
HOGENOM:HOG000239562 EMBL:AK119101 EMBL:BT010323 IPI:IPI00526690
RefSeq:NP_173809.1 UniGene:At.41503 UniGene:At.65734
ProteinModelPortal:Q8GW38 SMR:Q8GW38 EnsemblPlants:AT1G23980.1
GeneID:839010 KEGG:ath:AT1G23980 TAIR:At1g23980 eggNOG:NOG265447
InParanoid:Q8GW38 OMA:MEGKRIC PhylomeDB:Q8GW38
ProtClustDB:CLSN2914164 Genevestigator:Q8GW38 GermOnline:AT1G23980
Uniprot:Q8GW38
Length = 369
Score = 123 (48.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 148 IEGCSQQY-CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
I+G + + C +CL E K +P CSH +H DC+ WL ++S CPLCR
Sbjct: 135 IKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>UNIPROTKB|E1BEJ4 [details] [associations]
symbol:RNF103 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 CTD:7844 KO:K15695 OMA:GKVHWEK
GeneTree:ENSGT00390000006413 EMBL:DAAA02031122 IPI:IPI00713571
RefSeq:NP_001178337.1 UniGene:Bt.14340 Ensembl:ENSBTAT00000027899
GeneID:511639 KEGG:bta:511639 NextBio:20870028 Uniprot:E1BEJ4
Length = 685
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 618 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 664
>UNIPROTKB|J9NVH2 [details] [associations]
symbol:RNF103 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
CTD:7844 KO:K15695 OMA:GKVHWEK GeneTree:ENSGT00390000006413
EMBL:AAEX03010929 RefSeq:XP_532971.2 Ensembl:ENSCAFT00000043927
GeneID:475761 KEGG:cfa:475761 Uniprot:J9NVH2
Length = 685
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 618 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 664
>UNIPROTKB|O00237 [details] [associations]
symbol:RNF103 "E3 ubiquitin-protein ligase RNF103"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
GO:GO:0007417 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
eggNOG:COG5540 GO:GO:0004842 EMBL:AC015971 EMBL:D76444
EMBL:AB052743 EMBL:BC035053 EMBL:BC110333 IPI:IPI00298022
PIR:JC5392 RefSeq:NP_001185880.1 RefSeq:NP_001185881.1
RefSeq:NP_005658.1 UniGene:Hs.731426 UniGene:Hs.733319
ProteinModelPortal:O00237 SMR:O00237 IntAct:O00237 STRING:O00237
PhosphoSite:O00237 PRIDE:O00237 DNASU:7844 Ensembl:ENST00000237455
GeneID:7844 KEGG:hsa:7844 UCSC:uc002srm.3 CTD:7844
GeneCards:GC02M086830 HGNC:HGNC:12859 MIM:602507 neXtProt:NX_O00237
PharmGKB:PA37448 HOGENOM:HOG000006578 HOVERGEN:HBG054144
InParanoid:O00237 KO:K15695 OMA:GKVHWEK OrthoDB:EOG4Q58NV
GenomeRNAi:7844 NextBio:30254 Bgee:O00237 CleanEx:HS_RNF103
Genevestigator:O00237 GermOnline:ENSG00000118639 Uniprot:O00237
Length = 685
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 618 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 664
>UNIPROTKB|F1SVD1 [details] [associations]
symbol:RNF103 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005783 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 OMA:GKVHWEK
GeneTree:ENSGT00390000006413 EMBL:CU467088
Ensembl:ENSSSCT00000009000 Uniprot:F1SVD1
Length = 685
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 151 CSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSS-LCPLCRF 198
C++ CV+CLE + G +PC H++HQ+C+V WL CP+CR+
Sbjct: 618 CTE--CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 664
>TAIR|locus:4515102735 [details] [associations]
symbol:AT1G67856 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00891607 RefSeq:NP_001117565.1 UniGene:At.66117
UniGene:At.70659 ProteinModelPortal:B3H543 SMR:B3H543
EnsemblPlants:AT1G67856.1 GeneID:6240476 KEGG:ath:AT1G67856
TAIR:At1g67856 eggNOG:NOG324400 HOGENOM:HOG000242879 KO:K16285
OMA:VSELSCK PhylomeDB:B3H543 ProtClustDB:CLSN2681281
Genevestigator:B3H543 Uniprot:B3H543
Length = 133
Score = 95 (38.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 156 CVICLEVMKEGSKAARM-PCSHIYHQDCLVNWLKNS-SLCPLCR 197
C +CL KE + + + C H +H CL W N+ + CPLCR
Sbjct: 87 CCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCR 130
Score = 35 (17.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 97 NEYHNMGSGIIPLVVIIKAANVS 119
+ Y G++P++V+ +VS
Sbjct: 4 SHYPTASEGVMPMLVMNTVVSVS 26
>DICTYBASE|DDB_G0282479 [details] [associations]
symbol:DDB_G0282479 "E3 ubiquitin-protein ligase
DMA2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0282479 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG302028 RefSeq:XP_640074.1 ProteinModelPortal:Q54SG5
EnsemblProtists:DDB0204786 GeneID:8623603 KEGG:ddi:DDB_G0282479
InParanoid:Q54SG5 Uniprot:Q54SG5
Length = 320
Score = 122 (48.0 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
++G + C ICL+ +PC H YH DC+ WLK S+CP+C+
Sbjct: 265 LKGGDSKTCSICLDDFAVNDAIKTLPCIHHYHSDCVEKWLKIKSVCPICK 314
>ZFIN|ZDB-GENE-040426-772 [details] [associations]
symbol:rnf13 "ring finger protein 13" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 ZFIN:ZDB-GENE-040426-772 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:BC044449 IPI:IPI00771289
RefSeq:NP_957338.1 UniGene:Dr.80141 ProteinModelPortal:Q803J9
GeneID:793981 KEGG:dre:793981 InParanoid:Q803J9 NextBio:20931664
ArrayExpress:Q803J9 Uniprot:Q803J9
Length = 377
Score = 123 (48.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G S C ICL+ +EG + +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDSYDVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|Q7XLY8 [details] [associations]
symbol:LOC_Os04g50100 "E3 ubiquitin-protein ligase
Os04g0590900" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AP008210 EMBL:CM000141 EMBL:AL662981
EMBL:AK066752 RefSeq:NP_001053709.1 UniGene:Os.16906
UniGene:Os.52382 ProteinModelPortal:Q7XLY8 PRIDE:Q7XLY8
EnsemblPlants:LOC_Os04g50100.1 GeneID:4336823 KEGG:osa:4336823
Gramene:Q7XLY8 eggNOG:NOG264050 OMA:SHAFHQQ ProtClustDB:CLSN2693089
Uniprot:Q7XLY8
Length = 383
Score = 123 (48.4 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C +CL +G +P CSH +HQ C+ WLK+ S CPLCR ++
Sbjct: 157 CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANIT 203
>RGD|1306011 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1306011 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OMA:GQNTATD OrthoDB:EOG4VQ9PZ EMBL:BC099810 IPI:IPI00369174
RefSeq:NP_001028874.1 UniGene:Rn.143411 SMR:Q499Q1
Ensembl:ENSRNOT00000012317 GeneID:314613 KEGG:rno:314613
UCSC:RGD:1306011 InParanoid:Q499Q1 NextBio:667904
Genevestigator:Q499Q1 Uniprot:Q499Q1
Length = 328
Score = 122 (48.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 140 QVLKLAPAIE---GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q L P E G + C +C E G + ++PC+H++H C+V WL+ CP+C
Sbjct: 228 QALPTVPVTEEHVGSGLE-CPVCKEDYALGERVRQLPCNHLFHDSCIVPWLEQHDSCPVC 286
Query: 197 RFQLS 201
R L+
Sbjct: 287 RKSLT 291
>UNIPROTKB|C9IY58 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946275
ProteinModelPortal:C9IY58 SMR:C9IY58 STRING:C9IY58
Ensembl:ENST00000482083 ArrayExpress:C9IY58 Bgee:C9IY58
Uniprot:C9IY58
Length = 232
Score = 119 (46.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 163
>UNIPROTKB|C9JCY0 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00976014
ProteinModelPortal:C9JCY0 SMR:C9JCY0 STRING:C9JCY0
Ensembl:ENST00000491086 ArrayExpress:C9JCY0 Bgee:C9JCY0
Uniprot:C9JCY0
Length = 233
Score = 119 (46.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 163
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C ICL + + +PCSH++H DC+ WLK ++ CPLC+
Sbjct: 355 CCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396
>ZFIN|ZDB-GENE-091204-252 [details] [associations]
symbol:si:dkeyp-86f7.4 "si:dkeyp-86f7.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 ZFIN:ZDB-GENE-091204-252
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 EMBL:BX957231 EMBL:CR293501
IPI:IPI00491152 Ensembl:ENSDART00000042727 Uniprot:E9QIM4
Length = 319
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
CV+C + + G + +PC H+YH+ C+ WL CP+C++ +
Sbjct: 262 CVVCTDSYQRGEQVTVLPCRHLYHKKCIEPWLLEHPTCPMCKYNI 306
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICLE ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICLE ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|F7EP40 [details] [associations]
symbol:znrf1 "E3 ubiquitin-protein ligase znrf1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0043161
GO:GO:0016020 GO:GO:0046872 GO:GO:0005768 GO:GO:0008270
GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070936 CTD:84937 GeneTree:ENSGT00390000013068 KO:K10694
EMBL:AAMC01003501 EMBL:AAMC01003502 EMBL:AAMC01003503
RefSeq:NP_001016977.1 UniGene:Str.64757 ProteinModelPortal:F7EP40
Ensembl:ENSXETT00000016718 GeneID:549731 KEGG:xtr:549731
Xenbase:XB-GENE-998325 OMA:IAPRWIG Bgee:F7EP40 Uniprot:F7EP40
Length = 195
Score = 116 (45.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
CVICLE + +G AR+PC IYH+ C+ +W + + CP
Sbjct: 152 CVICLEELSQGDTIARLPCLCIYHKSCIDSWFEVNRCCP 190
>UNIPROTKB|Q66KG7 [details] [associations]
symbol:znrf1 "E3 ubiquitin-protein ligase znrf1"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0043161 GO:GO:0016020
GO:GO:0046872 GO:GO:0005768 GO:GO:0008270 GO:GO:0005764
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936
CTD:84937 KO:K10694 HOVERGEN:HBG094200 EMBL:BC047964 EMBL:BC080402
RefSeq:NP_001080802.1 UniGene:Xl.34205 ProteinModelPortal:Q66KG7
GeneID:380496 KEGG:xla:380496 Xenbase:XB-GENE-998330 Uniprot:Q66KG7
Length = 195
Score = 116 (45.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
CVICLE + +G AR+PC IYH+ C+ +W + + CP
Sbjct: 152 CVICLEELSQGDTIARLPCLCIYHKSCIDSWFEVNRCCP 190
>ZFIN|ZDB-GENE-101206-1 [details] [associations]
symbol:wu:fb39e10 "wu:fb39e10" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-101206-1 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:CR385081 IPI:IPI00898579
RefSeq:XP_001923015.2 UniGene:Dr.76926 Ensembl:ENSDART00000128102
GeneID:561841 KEGG:dre:561841 NextBio:20884119 Bgee:E7F6I4
Uniprot:E7F6I4
Length = 474
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C IC K G + +PC H YH C+ WLK ++ CP+CR +S
Sbjct: 423 CQICFSEYKAGERLRMLPCLHDYHVKCIDRWLKENATCPICRADVS 468
>UNIPROTKB|B3KR12 [details] [associations]
symbol:RNF13 "cDNA FLJ33452 fis, clone BRAMY2000151, highly
similar to RING finger protein 13" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
EMBL:CH471052 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000234362 HOVERGEN:HBG063762 EMBL:AC069216 EMBL:AC117395
UniGene:Hs.12333 HGNC:HGNC:10057 ChiTaRS:RNF13 EMBL:AK090771
IPI:IPI00373832 SMR:B3KR12 STRING:B3KR12 Ensembl:ENST00000361785
UCSC:uc010hvh.3 Uniprot:B3KR12
Length = 262
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 163
>UNIPROTKB|F1PCH2 [details] [associations]
symbol:RNF126 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 OMA:GQNTATD EMBL:AAEX03012674
Ensembl:ENSCAFT00000031336 Uniprot:F1PCH2
Length = 305
Score = 120 (47.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 140 QVLKLAPAIE---GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q L P E G + C +C + G + ++PCSH++H C+V WL+ CP+C
Sbjct: 190 QALPTVPVTEEHVGSGLE-CPVCKDDYGLGERVRQLPCSHLFHDGCIVPWLQQHDSCPVC 248
Query: 197 RFQLS 201
R L+
Sbjct: 249 RKSLT 253
>UNIPROTKB|F1NUJ3 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 EMBL:AADN02021136
EMBL:AADN02021135 IPI:IPI00820464 Ensembl:ENSGALT00000038908
Uniprot:F1NUJ3
Length = 272
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 191 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 240
>TAIR|locus:1006230395 [details] [associations]
symbol:AT4G24015 "AT4G24015" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL078468
HOGENOM:HOG000006232 UniGene:At.32387 EMBL:AF079178 EMBL:BT005844
IPI:IPI00523532 PIR:T51850 RefSeq:NP_974604.1
ProteinModelPortal:Q84TF5 SMR:Q84TF5 EnsemblPlants:AT4G24015.1
GeneID:2745724 KEGG:ath:AT4G24015 TAIR:At4g24015 eggNOG:NOG268148
InParanoid:Q84TF5 OMA:TPHLYPQ PhylomeDB:Q84TF5
ProtClustDB:CLSN2713511 Genevestigator:Q84TF5 Uniprot:Q84TF5
Length = 174
Score = 113 (44.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 150 GCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
G C +CL + + MP C HI+H DC+ WL + + CPLCR +S
Sbjct: 99 GTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVS 151
>MGI|MGI:1917544 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1917544
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC016543 IPI:IPI00130263 RefSeq:NP_653111.1
UniGene:Mm.466670 PDB:2ECT PDBsum:2ECT ProteinModelPortal:Q91YL2
SMR:Q91YL2 PhosphoSite:Q91YL2 PaxDb:Q91YL2 PRIDE:Q91YL2
Ensembl:ENSMUST00000047203 GeneID:70294 KEGG:mmu:70294
InParanoid:Q91YL2 OMA:RSADNGS EvolutionaryTrace:Q91YL2
NextBio:331326 Bgee:Q91YL2 CleanEx:MM_RNF126 Genevestigator:Q91YL2
GermOnline:ENSMUSG00000035890 Uniprot:Q91YL2
Length = 313
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 140 QVLKLAPAIE---GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q L P E G + C +C E G ++PC+H++H C+V WL+ CP+C
Sbjct: 213 QALPTVPVTEEHVGSGLE-CPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVC 271
Query: 197 RFQLS 201
R L+
Sbjct: 272 RKSLT 276
>TAIR|locus:2125652 [details] [associations]
symbol:AT4G32600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY074271
EMBL:AY081300 EMBL:AY096655 IPI:IPI00534397 RefSeq:NP_194986.2
UniGene:At.27844 ProteinModelPortal:Q8VY23 SMR:Q8VY23
EnsemblPlants:AT4G32600.1 GeneID:829395 KEGG:ath:AT4G32600
HOGENOM:HOG000239557 InParanoid:Q8VY23 OMA:EHIIDIP PhylomeDB:Q8VY23
ProtClustDB:CLSN2691130 Genevestigator:Q8VY23 Uniprot:Q8VY23
Length = 453
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 147 AIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
AI G C ICL + +PCSH +H++C+ WLK ++ CPLC+ ++
Sbjct: 355 AISG-EDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>POMBASE|SPBC2A9.04c [details] [associations]
symbol:san1 "sir antagonist" species:4896
"Schizosaccharomyces pombe" [GO:0000209 "protein
polyubiquitination" evidence=IMP] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=ISO] [GO:0006342 "chromatin silencing" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IC] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:1901044 "protein
polyubiquitination involved in nucleus-associated proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPBC2A9.04c Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006342 GO:GO:0004842 GO:GO:0006325 HSSP:Q13049
OrthoDB:EOG40CMSH PIR:T40095 RefSeq:NP_596213.1
ProteinModelPortal:Q9Y7K6 EnsemblFungi:SPBC2A9.04c.1 GeneID:2540480
KEGG:spo:SPBC2A9.04c eggNOG:NOG246952 OMA:HASSNER NextBio:20801607
GO:GO:1901044 Uniprot:Q9Y7K6
Length = 741
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 156 CVICLEVMKEGSK--AARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C IC + M E + A +MPC HI+ ++CL WL+N CPLCR
Sbjct: 107 CPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLCR 150
>TAIR|locus:2133877 [details] [associations]
symbol:AT4G26580 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AK227805 IPI:IPI00524845 RefSeq:NP_001190848.1
RefSeq:NP_194388.2 UniGene:At.23121 UniGene:At.67112
ProteinModelPortal:Q0WSW1 SMR:Q0WSW1 EnsemblPlants:AT4G26580.1
EnsemblPlants:AT4G26580.2 GeneID:828765 KEGG:ath:AT4G26580
eggNOG:NOG314995 OMA:RPVWPMR ProtClustDB:CLSN2690028
Genevestigator:Q0WSW1 Uniprot:Q0WSW1
Length = 335
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL KE + ++PCSH +H C+ WL+ S CPLC+ L
Sbjct: 289 CCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>TAIR|locus:2117701 [details] [associations]
symbol:AT4G18110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL110123 EMBL:AL161547 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR024766 Pfam:PF12678 HSSP:P38398 IPI:IPI00547458
PIR:T14811 RefSeq:NP_193545.1 UniGene:At.64190
ProteinModelPortal:Q9SVW0 SMR:Q9SVW0 EnsemblPlants:AT4G18110.1
GeneID:827536 KEGG:ath:AT4G18110 TAIR:At4g18110 eggNOG:NOG256321
HOGENOM:HOG000153557 InParanoid:Q9SVW0 OMA:RILIRSP PhylomeDB:Q9SVW0
ProtClustDB:CLSN2686031 Genevestigator:Q9SVW0 Uniprot:Q9SVW0
Length = 213
Score = 116 (45.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 149 EGCS---QQYCVICLEVM-KEGS--KAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
+GC ++ C+ICLE + GS + ++ CSH +H+DC++ WL+ CP CR
Sbjct: 145 QGCLIPIEEECIICLEELASSGSERRIMKLLCSHSFHKDCILPWLRCKRSCPTCR 199
>ZFIN|ZDB-GENE-040426-1905 [details] [associations]
symbol:znrf1 "zinc and ring finger 1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1905
GO:GO:0043161 GO:GO:0016020 GO:GO:0046872 GO:GO:0005768
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:84937 GeneTree:ENSGT00390000013068
KO:K10694 OMA:FGHYRAG EMBL:BC063239 IPI:IPI00481044
RefSeq:NP_957164.1 UniGene:Dr.81068 ProteinModelPortal:Q6P4U6
Ensembl:ENSDART00000010495 GeneID:393844 KEGG:dre:393844
eggNOG:NOG314053 HOGENOM:HOG000285998 HOVERGEN:HBG094200
InParanoid:Q6P4U6 OrthoDB:EOG41C6XM NextBio:20814830
ArrayExpress:Q6P4U6 Bgee:Q6P4U6 Uniprot:Q6P4U6
Length = 215
Score = 116 (45.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
CVICLE +++G AR+PC IYH+ C+ +W + + CP
Sbjct: 172 CVICLEELQQGDTIARLPCLCIYHKSCIDSWFEINRSCP 210
>TAIR|locus:2143176 [details] [associations]
symbol:AT5G15820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL391144 HOGENOM:HOG000152578 ProtClustDB:CLSN2685198
EMBL:AY057666 EMBL:AY113016 IPI:IPI00536796 PIR:T51411
RefSeq:NP_197086.1 UniGene:At.26239 ProteinModelPortal:Q9LFU4
SMR:Q9LFU4 EnsemblPlants:AT5G15820.1 GeneID:831439
KEGG:ath:AT5G15820 TAIR:At5g15820 eggNOG:NOG241089
InParanoid:Q9LFU4 OMA:IVCAICK PhylomeDB:Q9LFU4
Genevestigator:Q9LFU4 Uniprot:Q9LFU4
Length = 348
Score = 120 (47.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C IC + + K R+PC H YH +C++ WL + CP+CR +L
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHEL 335
>UNIPROTKB|K7GLM9 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU639394 Ensembl:ENSSSCT00000035144 Uniprot:K7GLM9
Length = 238
Score = 117 (46.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 155 YCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+C +C+E K+ +PC H++H+ C+ WL CP+C+ +
Sbjct: 117 HCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 162
>TAIR|locus:2147152 [details] [associations]
symbol:AIP2 "ABI3-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0009737
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009738
GO:GO:0046872 GO:GO:0008270 GO:GO:0009788 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AJ251087 EMBL:DQ059130 EMBL:AF296834
EMBL:AY081329 EMBL:BT000238 IPI:IPI00545960 RefSeq:NP_197591.1
UniGene:At.1134 UniGene:At.68499 HSSP:Q9LRB7
ProteinModelPortal:Q8RXD3 SMR:Q8RXD3 IntAct:Q8RXD3 STRING:Q8RXD3
PaxDb:Q8RXD3 PRIDE:Q8RXD3 EnsemblPlants:AT5G20910.1 GeneID:832215
KEGG:ath:AT5G20910 TAIR:At5g20910 eggNOG:COG5540
HOGENOM:HOG000243158 InParanoid:Q8RXD3 KO:K16274 OMA:MQELPCK
PhylomeDB:Q8RXD3 ProtClustDB:CLSN2687405 Genevestigator:Q8RXD3
GO:GO:0004842 Uniprot:Q8RXD3
Length = 310
Score = 119 (46.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C IC E + G K +PC H +H CL WL + CP+CR +L
Sbjct: 230 CCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 274
>GENEDB_PFALCIPARUM|PFC0845c [details] [associations]
symbol:PFC0845c "ubiquitin--protein ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0000151
"ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0020011 "apicoplast" evidence=RCA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HOGENOM:HOG000171951 InterPro:IPR024766 Pfam:PF12678 EMBL:AL844502
KO:K03868 OMA:NRDWEFQ PIR:T18513 RefSeq:XP_001351261.1
ProteinModelPortal:O77367 SMR:O77367 EnsemblProtists:PFC0845c:mRNA
GeneID:814505 KEGG:pfa:PFC0845c EuPathDB:PlasmoDB:PF3D7_0319100
ProtClustDB:CLSZ2431742 Uniprot:O77367
Length = 107
Score = 81 (33.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 161 EVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPL 195
++ KEG A C+H +H C+ W+K +CPL
Sbjct: 61 KIDKEGCTVAWGVCNHAFHLHCISRWIKARQVCPL 95
Score = 36 (17.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 26 THDHEAIFSLHLFSA 40
T+D IF +H +SA
Sbjct: 6 TNDKRDIFKIHKWSA 20
>UNIPROTKB|O77367 [details] [associations]
symbol:PFC0845c "Ubiquitin-protein ligase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 HOGENOM:HOG000171951
InterPro:IPR024766 Pfam:PF12678 EMBL:AL844502 KO:K03868 OMA:NRDWEFQ
PIR:T18513 RefSeq:XP_001351261.1 ProteinModelPortal:O77367
SMR:O77367 EnsemblProtists:PFC0845c:mRNA GeneID:814505
KEGG:pfa:PFC0845c EuPathDB:PlasmoDB:PF3D7_0319100
ProtClustDB:CLSZ2431742 Uniprot:O77367
Length = 107
Score = 81 (33.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 161 EVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPL 195
++ KEG A C+H +H C+ W+K +CPL
Sbjct: 61 KIDKEGCTVAWGVCNHAFHLHCISRWIKARQVCPL 95
Score = 36 (17.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 26 THDHEAIFSLHLFSA 40
T+D IF +H +SA
Sbjct: 6 TNDKRDIFKIHKWSA 20
>TAIR|locus:2097890 [details] [associations]
symbol:AT3G48030 "AT3G48030" species:3702 "Arabidopsis
thaliana" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF04588 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL049658 EMBL:AB099346 EMBL:BT008566 EMBL:BT008679
IPI:IPI00518659 IPI:IPI00656859 IPI:IPI00656975 PIR:T06680
RefSeq:NP_190386.1 UniGene:At.35746 ProteinModelPortal:Q7X843
SMR:Q7X843 PaxDb:Q7X843 PRIDE:Q7X843 EnsemblPlants:AT3G48030.1
GeneID:823958 KEGG:ath:AT3G48030 TAIR:At3g48030 eggNOG:NOG250531
HOGENOM:HOG000034172 InParanoid:Q7X843 OMA:RFKSTNE PhylomeDB:Q7X843
ProtClustDB:CLSN2913369 Genevestigator:Q7X843 GermOnline:AT3G48030
InterPro:IPR007667 PROSITE:PS51503 Uniprot:Q7X843
Length = 349
Score = 117 (46.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C +CL + K +P CSH +H C+ WL ++S CPLCR LS
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLS 253
Score = 35 (17.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 22 LIQSTHDHEAIFSLHLFSATPNIMNK 47
L+ H+ EA+ +AT +MN+
Sbjct: 83 LLSEIHETEALSPKSSSAATLTLMNQ 108
>UNIPROTKB|F1P9X1 [details] [associations]
symbol:ZNRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000013068 OMA:FGHYRAG EMBL:AAEX03004068
Ensembl:ENSCAFT00000031981 Uniprot:F1P9X1
Length = 184
Score = 113 (44.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCP 194
CVICLE + +G AR+PC IYH+ C+ +W + + CP
Sbjct: 141 CVICLEELLQGDTIARLPCLCIYHKSCIDSWFEVNRSCP 179
>UNIPROTKB|E1BQX5 [details] [associations]
symbol:E1BQX5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005109 "frizzled binding" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0038018 "Wnt receptor
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0072089 "stem cell proliferation"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005887 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0030178
GeneTree:ENSGT00530000063291 EMBL:AADN02026094 IPI:IPI00587362
Ensembl:ENSGALT00000001524 OMA:YDPFVYC Uniprot:E1BQX5
Length = 716
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 151 CSQQ-YCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
CS C ICLE EG + + CSH +H++C+ WL+ CPLC F +
Sbjct: 258 CSSAPVCAICLEEFTEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNI 308
>UNIPROTKB|J3KPI0 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 EMBL:AC096759 HGNC:HGNC:17479
ChiTaRS:RCHY1 ProteinModelPortal:J3KPI0 Ensembl:ENST00000380840
Uniprot:J3KPI0
Length = 221
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAAR-MPCSHIYHQDCLVNWLKNSSLCPLC 196
IE S+Q C ICLE + A +PC H+ H+ C LK CPLC
Sbjct: 97 IENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 146
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 4 TAVFDEYQCDIYQPEDDD 21
+ +F EY CDI D D
Sbjct: 39 STLFGEYYCDICHLFDKD 56
>TAIR|locus:2154729 [details] [associations]
symbol:AT5G53910 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AB007644 EMBL:DQ059094 IPI:IPI00540264 RefSeq:NP_200202.1
UniGene:At.55536 ProteinModelPortal:Q9FN35 SMR:Q9FN35
EnsemblPlants:AT5G53910.1 GeneID:835474 KEGG:ath:AT5G53910
TAIR:At5g53910 eggNOG:NOG306750 HOGENOM:HOG000152571
InParanoid:Q9FN35 OMA:CIMEWFK PhylomeDB:Q9FN35
ProtClustDB:CLSN2916335 Genevestigator:Q9FN35 Uniprot:Q9FN35
Length = 230
Score = 116 (45.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 152 SQQY-CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
S +Y C IC + K G + A + C H + C++ W K CPLCRF+L
Sbjct: 167 SGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFEL 216
>DICTYBASE|DDB_G0281679 [details] [associations]
symbol:DDB_G0281679 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0281679
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000042 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_640574.1 ProteinModelPortal:Q54TL7
EnsemblProtists:DDB0238678 GeneID:8623183 KEGG:ddi:DDB_G0281679
eggNOG:NOG241246 OMA:KCPIDNI Uniprot:Q54TL7
Length = 391
Score = 120 (47.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 153 QQY--CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSL-CPL 195
QQ+ C+ICL G ++PCSHI+H +C+ NWL N+S CP+
Sbjct: 338 QQFSTCMICLSDFDLGESIIKLPCSHIFHINCISNWLSNASTKCPI 383
>WB|WBGene00012944 [details] [associations]
symbol:Y47D3B.11 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG282652
EMBL:AL031635 GeneTree:ENSGT00530000063291 PIR:T26958
RefSeq:NP_499473.2 ProteinModelPortal:Q9U2B7 SMR:Q9U2B7
EnsemblMetazoa:Y47D3B.11 GeneID:176575 KEGG:cel:CELE_Y47D3B.11
UCSC:Y47D3B.11 CTD:176575 WormBase:Y47D3B.11 HOGENOM:HOG000019949
InParanoid:Q9U2B7 OMA:FCGHEFH NextBio:893146 Uniprot:Q9U2B7
Length = 487
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+Q+ CVICLE +EG++ + C H +H C+ WL + CPLC+F +
Sbjct: 313 AQERCVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQFDV 361
>TAIR|locus:2092271 [details] [associations]
symbol:AT3G19910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 EMBL:AB025631 EMBL:AY045590 EMBL:AY045984
EMBL:AY079353 EMBL:AY084453 IPI:IPI00540114 RefSeq:NP_566651.1
UniGene:At.19776 ProteinModelPortal:Q9LT17 SMR:Q9LT17 STRING:Q9LT17
PaxDb:Q9LT17 PRIDE:Q9LT17 EnsemblPlants:AT3G19910.1 GeneID:821529
KEGG:ath:AT3G19910 TAIR:At3g19910 eggNOG:NOG313539
HOGENOM:HOG000239779 InParanoid:Q9LT17 OMA:HANEDDQ PhylomeDB:Q9LT17
ProtClustDB:CLSN2688581 Genevestigator:Q9LT17 Uniprot:Q9LT17
Length = 340
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
+ + CVIC ++ +PC H YH +C+ NWLK + +CP+C ++S
Sbjct: 284 TNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVS 333
>TAIR|locus:2009660 [details] [associations]
symbol:AT1G53190 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT020580 EMBL:BT029187
IPI:IPI00525716 RefSeq:NP_001031177.1 RefSeq:NP_175727.2
UniGene:At.43317 ProteinModelPortal:Q5EAI9 SMR:Q5EAI9 PRIDE:Q5EAI9
EnsemblPlants:AT1G53190.1 EnsemblPlants:AT1G53190.2 GeneID:841753
KEGG:ath:AT1G53190 TAIR:At1g53190 HOGENOM:HOG000238152
InParanoid:Q5EAI9 OMA:TLDCGHE PhylomeDB:Q5EAI9
ProtClustDB:CLSN2688389 Genevestigator:Q5EAI9 Uniprot:Q5EAI9
Length = 494
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 137 INTQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
IN + +P + + C IC E K K A + C H YH +CL WL ++CP+C
Sbjct: 423 INFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPIC 482
Query: 197 R 197
+
Sbjct: 483 K 483
>TAIR|locus:2161740 [details] [associations]
symbol:AT5G55970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690028 EMBL:AY085253 IPI:IPI00546676
RefSeq:NP_568834.1 RefSeq:NP_851197.1 UniGene:At.7462
ProteinModelPortal:Q8LES9 SMR:Q8LES9 PRIDE:Q8LES9
EnsemblPlants:AT5G55970.1 EnsemblPlants:AT5G55970.2 GeneID:835695
KEGG:ath:AT5G55970 TAIR:At5g55970 eggNOG:NOG241449
HOGENOM:HOG000238199 InParanoid:Q8LES9 OMA:CCICLAQ PhylomeDB:Q8LES9
Genevestigator:Q8LES9 Uniprot:Q8LES9
Length = 343
Score = 119 (46.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL K+ + ++PCSH +H C+ WL+ S CPLC+ L
Sbjct: 297 CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>TAIR|locus:2061057 [details] [associations]
symbol:AT2G24480 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AC006403 UniGene:At.13816 HOGENOM:HOG000131725
ProtClustDB:CLSN2683040 IPI:IPI00528248 PIR:B84637
RefSeq:NP_180024.1 ProteinModelPortal:Q9ZQ20 SMR:Q9ZQ20
EnsemblPlants:AT2G24480.1 GeneID:816984 KEGG:ath:AT2G24480
TAIR:At2g24480 eggNOG:NOG239911 InParanoid:Q9ZQ20 OMA:HNNSCPL
PhylomeDB:Q9ZQ20 Genevestigator:Q9ZQ20 Uniprot:Q9ZQ20
Length = 198
Score = 114 (45.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNW-LKNSSLCPLCR 197
C ICLE M +MP C H YH+ C+ W + +++ CPLCR
Sbjct: 150 CAICLENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCR 193
>FB|FBgn0037944 [details] [associations]
symbol:CG6923 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 KO:K10635 GeneTree:ENSGT00670000097625 EMBL:AY058520
EMBL:BT050479 RefSeq:NP_001247056.1 RefSeq:NP_650112.1
RefSeq:NP_731623.1 UniGene:Dm.7827 SMR:Q9VGI6 IntAct:Q9VGI6
MINT:MINT-885267 EnsemblMetazoa:FBtr0082432
EnsemblMetazoa:FBtr0082433 EnsemblMetazoa:FBtr0307892 GeneID:41420
KEGG:dme:Dmel_CG6923 UCSC:CG6923-RA FlyBase:FBgn0037944
InParanoid:Q9VGI6 OMA:PHRASAI OrthoDB:EOG4KWH7N GenomeRNAi:41420
NextBio:823770 Uniprot:Q9VGI6
Length = 1256
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL + + ++ R+PC H++H DC+ WL + CP+CR +
Sbjct: 1187 CAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1231
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 8 DEYQCDIYQPEDDDLIQSTHDHEAIFSLHLFSATPNIMNKNLIVLQQD 55
D++ D +DDD++ E I S+ L S + N LQ+D
Sbjct: 563 DDWSSD---DDDDDVVFVHSTREPILSIDLTSDDDGLANDTQ--LQRD 605
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 23 IQSTHDHEAIFSLHLFSATPNIMNKNLIVLQQDL 56
I H AI + L A P +++NL QQ +
Sbjct: 967 IHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSM 1000
>TAIR|locus:2028225 [details] [associations]
symbol:AT1G45180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007915
HOGENOM:HOG000241085 ProtClustDB:CLSN2681891 IPI:IPI00535770
RefSeq:NP_175132.1 UniGene:At.38723 ProteinModelPortal:Q9MAJ1
SMR:Q9MAJ1 EnsemblPlants:AT1G45180.1 GeneID:841086
KEGG:ath:AT1G45180 TAIR:At1g45180 eggNOG:NOG247923
InParanoid:Q9MAJ1 OMA:HISRNAS PhylomeDB:Q9MAJ1
Genevestigator:Q9MAJ1 Uniprot:Q9MAJ1
Length = 645
Score = 122 (48.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C +C E KE + R+ C H +H C+ WLK +LCP+C+
Sbjct: 592 CCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICK 633
>UNIPROTKB|F1S5Q0 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PLRTSGM EMBL:CU639394 Ensembl:ENSSSCT00000015306
ArrayExpress:F1S5Q0 Uniprot:F1S5Q0
Length = 273
Score = 117 (46.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 155 YCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+C +C+E K+ +PC H++H+ C+ WL CP+C+ +
Sbjct: 117 HCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 162
>FB|FBgn0052850 [details] [associations]
symbol:CG32850 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AE014135 eggNOG:NOG265447 KO:K11980
GeneTree:ENSGT00700000104290 EMBL:AY094874 RefSeq:NP_726563.1
UniGene:Dm.12791 SMR:Q8SX35 MINT:MINT-1614135 STRING:Q8SX35
EnsemblMetazoa:FBtr0089123 GeneID:318246 KEGG:dme:Dmel_CG32850
UCSC:CG32850-RA FlyBase:FBgn0052850 InParanoid:Q8SX35 OMA:NCIDDWL
OrthoDB:EOG4QV9V7 GenomeRNAi:318246 NextBio:845314 Uniprot:Q8SX35
Length = 147
Score = 105 (42.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
CVIC+ +PC HIYH +C+ +WL S CP C
Sbjct: 92 CVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSC 132
>DICTYBASE|DDB_G0287847 [details] [associations]
symbol:DDB_G0287847 "putative E3 ubiquitin-protein
ligase" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0287847 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5243 KO:K10601 RefSeq:XP_637096.1
ProteinModelPortal:Q54JQ6 EnsemblProtists:DDB0187676 GeneID:8626351
KEGG:ddi:DDB_G0287847 InParanoid:Q54JQ6 OMA:ETIPHIN
ProtClustDB:CLSZ2846663 Uniprot:Q54JQ6
Length = 688
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
S + C++C E M G K +PC HI H CL +WL+ CP+CR
Sbjct: 262 SDKICIVCREDMTSGKK---LPCGHILHLHCLRSWLERQQTCPICR 304
>POMBASE|SPAC144.05 [details] [associations]
symbol:SPAC144.05 "ATP-dependent DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 PomBase:SPAC144.05 Prosite:PS00518
GO:GO:0005524 EMBL:CU329670 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 KO:K15710 OMA:HTWGVSG OrthoDB:EOG4Q2HPM PIR:T37672
RefSeq:NP_594666.1 ProteinModelPortal:Q9UTL9
EnsemblFungi:SPAC144.05.1 GeneID:2542902 KEGG:spo:SPAC144.05
NextBio:20803941 Uniprot:Q9UTL9
Length = 1375
Score = 121 (47.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 152 SQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
S Q C+IC +++K+G C H+Y CL WLK+SS CP+C+ +L+
Sbjct: 1088 SHQICIICRDIIKQGFITT---CGHLYCSFCLEAWLKHSSSCPMCKTKLN 1134
Score = 43 (20.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/56 (17%), Positives = 21/56 (37%)
Query: 24 QSTHDHEAIFSLHLFSATPNIMNKNLIVLQQDLLGGCAYWSANLSRCLSALNVAFH 79
+S D ++ H++ K ++ D+ GG + + L L + H
Sbjct: 251 KSLFDDRMVYVNHVYGYMTFSKEKTYLLASGDIRGGILADEMGMGKTLEVLGLVLH 306
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 232 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 281
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|O43567 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0031902 "late endosome membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0051865 GO:GO:0005637 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 OMA:MGSNDID OrthoDB:EOG41NTMB EMBL:AF037204
EMBL:AF070558 EMBL:AK313304 EMBL:AK090638 EMBL:CR456804
EMBL:AC069216 EMBL:AC117395 EMBL:BC009803 EMBL:BC009781
IPI:IPI00151036 RefSeq:NP_009213.1 RefSeq:NP_899237.1
UniGene:Hs.12333 ProteinModelPortal:O43567 SMR:O43567 IntAct:O43567
STRING:O43567 PhosphoSite:O43567 PRIDE:O43567 DNASU:11342
Ensembl:ENST00000344229 Ensembl:ENST00000392894 GeneID:11342
KEGG:hsa:11342 UCSC:uc003exn.4 GeneCards:GC03P149531
HGNC:HGNC:10057 HPA:HPA008709 MIM:609247 neXtProt:NX_O43567
PharmGKB:PA34422 InParanoid:O43567 ChiTaRS:RNF13 GenomeRNAi:11342
NextBio:43096 ArrayExpress:O43567 Bgee:O43567 CleanEx:HS_RNF13
Genevestigator:O43567 GermOnline:ENSG00000082996 Uniprot:O43567
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|I3LG86 [details] [associations]
symbol:RNF13 "Ring finger protein 13" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0031902
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00700000104226 CTD:11342 KO:K15692 OMA:MGSNDID
EMBL:FP312790 EMBL:CU915458 EMBL:GACC01000242 RefSeq:XP_003358656.2
Ensembl:ENSSSCT00000022374 GeneID:100621829 KEGG:ssc:100621829
Uniprot:I3LG86
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|Q5RCV8 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9601 "Pongo abelii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0000139 GO:GO:0031902 GO:GO:0005765 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:CR858160
RefSeq:NP_001125196.1 UniGene:Pab.18281 ProteinModelPortal:Q5RCV8
SMR:Q5RCV8 PRIDE:Q5RCV8 GeneID:100172087 KEGG:pon:100172087
Uniprot:Q5RCV8
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
+G C ICL+ ++G K +PCSH YH C+ WL K CP+C+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>TAIR|locus:2018334 [details] [associations]
symbol:AT1G04360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOGENOM:HOG000034161 ProtClustDB:CLSN2681784
EMBL:BT004287 EMBL:BT006138 IPI:IPI00526956 PIR:B86175
RefSeq:NP_171931.1 UniGene:At.42456 ProteinModelPortal:P93823
SMR:P93823 PRIDE:P93823 EnsemblPlants:AT1G04360.1 GeneID:839540
KEGG:ath:AT1G04360 TAIR:At1g04360 InParanoid:P93823 OMA:HIDCIDI
PhylomeDB:P93823 Genevestigator:P93823 GermOnline:AT1G04360
Uniprot:P93823
Length = 381
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 152 SQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
+ Q C +CL +E K +P C H++H DC+ WL+ ++ CPLCR +S
Sbjct: 130 NSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVS 180
>WB|WBGene00007666 [details] [associations]
symbol:C18B12.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00700000104226 eggNOG:NOG260066 EMBL:AL031620
PIR:T19377 RefSeq:NP_510498.1 ProteinModelPortal:Q9XX98 SMR:Q9XX98
PaxDb:Q9XX98 EnsemblMetazoa:C18B12.4 GeneID:181600
KEGG:cel:CELE_C18B12.4 UCSC:C18B12.4 CTD:181600 WormBase:C18B12.4
HOGENOM:HOG000018306 InParanoid:Q9XX98 OMA:AICLESF NextBio:914610
Uniprot:Q9XX98
Length = 456
Score = 120 (47.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 135 RSINTQVLKLAPAIE---GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNS- 190
R ++ + LK P + G C ICLE G K +PC H++H +C+ WL +
Sbjct: 223 RRLSKRNLKKIPVKKYRLGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTR 282
Query: 191 SLCPLCR 197
+CPLC+
Sbjct: 283 KICPLCK 289
>UNIPROTKB|Q9BV68 [details] [associations]
symbol:RNF126 "RING finger protein 126" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:AK000559 EMBL:BC001442 EMBL:BC025374
IPI:IPI00155562 IPI:IPI00745921 RefSeq:NP_919442.1 UniGene:Hs.69554
ProteinModelPortal:Q9BV68 SMR:Q9BV68 IntAct:Q9BV68
MINT:MINT-1032305 STRING:Q9BV68 PhosphoSite:Q9BV68 DMDM:74762712
PaxDb:Q9BV68 PRIDE:Q9BV68 Ensembl:ENST00000292363 GeneID:55658
KEGG:hsa:55658 UCSC:uc010drs.3 GeneCards:GC19M000647
H-InvDB:HIX0014558 HGNC:HGNC:21151 HPA:HPA043050 neXtProt:NX_Q9BV68
PharmGKB:PA134876469 InParanoid:Q9BV68 PhylomeDB:Q9BV68
ChiTaRS:RNF126 GenomeRNAi:55658 NextBio:60383 ArrayExpress:Q9BV68
Bgee:Q9BV68 CleanEx:HS_RNF126 Genevestigator:Q9BV68
GermOnline:ENSG00000070423 Uniprot:Q9BV68
Length = 326
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 140 QVLKLAPAIE---GCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLC 196
Q L P E G + C +C + G + ++PC+H++H C+V WL+ CP+C
Sbjct: 211 QALPTVPVTEEHVGSGLE-CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVC 269
Query: 197 RFQLS 201
R L+
Sbjct: 270 RKSLT 274
>TAIR|locus:2117622 [details] [associations]
symbol:RHA3B "RING-H2 finger A3B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010200 "response
to chitin" evidence=IEP] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 EMBL:AL161587 HOGENOM:HOG000237642
ProtClustDB:CLSN2683892 EMBL:AF078825 EMBL:DQ059126 EMBL:AL117188
EMBL:BT030633 EMBL:AY087082 IPI:IPI00540490 PIR:T41745
RefSeq:NP_195273.1 UniGene:At.23630 ProteinModelPortal:Q9ZT49
SMR:Q9ZT49 STRING:Q9ZT49 EnsemblPlants:AT4G35480.1 GeneID:829700
KEGG:ath:AT4G35480 GeneFarm:4095 TAIR:At4g35480 InParanoid:Q9ZT49
OMA:CAICITE PhylomeDB:Q9ZT49 Genevestigator:Q9ZT49 Uniprot:Q9ZT49
Length = 200
Score = 113 (44.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 149 EGCSQQYCVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
+G S C IC+ EG + +P CSH +H C+ WL + S CP CR
Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>UNIPROTKB|E7ETW5 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270 EMBL:AC096759
HGNC:HGNC:17479 ChiTaRS:RCHY1 IPI:IPI00966948
ProteinModelPortal:E7ETW5 SMR:E7ETW5 Ensembl:ENST00000512706
UCSC:uc010iir.3 ArrayExpress:E7ETW5 Bgee:E7ETW5 Uniprot:E7ETW5
Length = 239
Score = 107 (42.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAAR-MPCSHIYHQDCLVNWLKNSSLCPLC 196
IE S+Q C ICLE + A +PC H+ H+ C LK CPLC
Sbjct: 115 IENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 164
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 4 TAVFDEYQCDIYQPEDDD 21
+ +F EY CDI D D
Sbjct: 57 STLFGEYYCDICHLFDKD 74
>ASPGD|ASPL0000007802 [details] [associations]
symbol:AN5845 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 EMBL:BN001301
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACD01000100
OrthoDB:EOG4H75M9 RefSeq:XP_663449.1 ProteinModelPortal:Q5B0T5
EnsemblFungi:CADANIAT00007196 GeneID:2871167 KEGG:ani:AN5845.2
Uniprot:Q5B0T5
Length = 114
Score = 99 (39.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNW-LKNSSLCPLCR 197
C ICL+ ++ +PC H++H CL W L + CPLC+
Sbjct: 52 CCICLDTVRPDDLVHSIPCRHVFHAGCLEFWYLYENDNCPLCQ 94
>TAIR|locus:2053225 [details] [associations]
symbol:AT2G28920 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005727
EMBL:BT030073 IPI:IPI00534079 PIR:E84690 RefSeq:NP_180458.1
UniGene:At.52958 ProteinModelPortal:Q9ZV22 SMR:Q9ZV22 PaxDb:Q9ZV22
EnsemblPlants:AT2G28920.1 GeneID:817441 KEGG:ath:AT2G28920
TAIR:At2g28920 eggNOG:NOG317926 HOGENOM:HOG000154045
InParanoid:Q9ZV22 OMA:ICRAPFQ PhylomeDB:Q9ZV22
ProtClustDB:CLSN2913203 Genevestigator:Q9ZV22 Uniprot:Q9ZV22
Length = 145
Score = 104 (41.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 149 EGCSQQYCVICLEVMKEGSKA-ARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
+G CVICLE K + C H++H DC+ +W CP+CR
Sbjct: 86 DGVKADVCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>FB|FBgn0037442 [details] [associations]
symbol:CG10277 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 EMBL:AE014297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
GeneTree:ENSGT00700000104226 KO:K15692 FlyBase:FBgn0037442
EMBL:BT133094 RefSeq:NP_001097695.1 RefSeq:NP_649653.1
RefSeq:NP_731079.1 RefSeq:NP_731080.1 UniGene:Dm.1079 SMR:Q9VI20
MINT:MINT-1017740 EnsemblMetazoa:FBtr0081720
EnsemblMetazoa:FBtr0081721 EnsemblMetazoa:FBtr0081722
EnsemblMetazoa:FBtr0113198 GeneID:40791 KEGG:dme:Dmel_CG10277
UCSC:CG10277-RA InParanoid:Q9VI20 OMA:CIREQRR GenomeRNAi:40791
NextBio:820604 Uniprot:Q9VI20
Length = 536
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWL-KNSSLCPLCR 197
CVICLE E K +PCSH YH C+ WL +N +CP+C+
Sbjct: 235 CVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICK 277
>UNIPROTKB|I3L7L2 [details] [associations]
symbol:LOC100514278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:CU466452
Ensembl:ENSSSCT00000026253 Uniprot:I3L7L2
Length = 180
Score = 111 (44.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 139 TQVLKLAPAIEGCSQQYCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
T VL+ AI G +Q C IC + A +PC H +H+ C+ WL+ S CP+CR
Sbjct: 91 TLVLEDHTAI-G-QEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 147
>UNIPROTKB|H3BRK9 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HGNC:HGNC:463 ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140
EMBL:AC009102 Ensembl:ENST00000567738 Bgee:H3BRK9 Uniprot:H3BRK9
Length = 288
Score = 116 (45.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQLS 201
C IC + M+ A ++PC H++H CL +WL+ + CP CR L+
Sbjct: 56 CAICWDSMQA---ARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLN 98
>TAIR|locus:2081740 [details] [associations]
symbol:ATL5 "AtL5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 EMBL:AL162651 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000034169 EMBL:AF132015 EMBL:BT009649
IPI:IPI00522876 PIR:T48058 RefSeq:NP_191828.1 UniGene:At.4826
ProteinModelPortal:Q9LZJ6 SMR:Q9LZJ6 EnsemblPlants:AT3G62690.1
GeneID:825443 KEGG:ath:AT3G62690 GeneFarm:4973 TAIR:At3g62690
eggNOG:NOG304339 InParanoid:Q9LZJ6 OMA:PMEACER
ProtClustDB:CLSN2683616 Genevestigator:Q9LZJ6 GermOnline:AT3G62690
Uniprot:Q9LZJ6
Length = 257
Score = 115 (45.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
C +CL +E + +P C H++H DC+ W ++ S CPLCR
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR 155
>UNIPROTKB|F1PQP8 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0012501 "programmed cell death" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:AAEX03007678 Ensembl:ENSCAFT00000038586
Uniprot:F1PQP8
Length = 344
Score = 117 (46.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 155 YCVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
+C +C+E K+ +PC H++H+ C+ WL CP+C+ +
Sbjct: 192 HCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 237
>TAIR|locus:2195077 [details] [associations]
symbol:AT1G12760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AC025417 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059089 EMBL:AY136370 EMBL:BT000279
IPI:IPI00516637 RefSeq:NP_172736.2 UniGene:At.43884
ProteinModelPortal:Q9LN71 SMR:Q9LN71 PaxDb:Q9LN71 PRIDE:Q9LN71
EnsemblPlants:AT1G12760.1 GeneID:837832 KEGG:ath:AT1G12760
TAIR:At1g12760 InParanoid:Q9LN71 OMA:ESPRIYW PhylomeDB:Q9LN71
Genevestigator:Q9LN71 Uniprot:Q9LN71
Length = 408
Score = 118 (46.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL ++G++ +PC H +H C+ WL ++ CPLC++ +
Sbjct: 353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397
>UNIPROTKB|E7EVC4 [details] [associations]
symbol:TRAIP "TRAF-interacting protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC139451 HGNC:HGNC:30764 ChiTaRS:TRAIP IPI:IPI00946250
ProteinModelPortal:E7EVC4 SMR:E7EVC4 Ensembl:ENST00000473195
ArrayExpress:E7EVC4 Bgee:E7EVC4 Uniprot:E7EVC4
Length = 99
Score = 98 (39.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKN--SSLCPLCRFQL 200
C IC + A + C H +H CL+ W + S CP CR Q+
Sbjct: 7 CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQV 53
>TAIR|locus:2089398 [details] [associations]
symbol:ATL2 "TOXICOS EN LEVADURA 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006952
"defense response" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0043900 "regulation of multi-organism
process" evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:L76926 EMBL:DQ086849
EMBL:AB022217 EMBL:AY062865 EMBL:AY081621 EMBL:AY088232
IPI:IPI00522954 PIR:T52079 RefSeq:NP_188294.1 UniGene:At.22750
ProteinModelPortal:Q8L9T5 SMR:Q8L9T5 EnsemblPlants:AT3G16720.1
GeneID:820924 KEGG:ath:AT3G16720 TAIR:At3g16720
HOGENOM:HOG000034169 InParanoid:Q8L9T5 OMA:KIMLSAI PhylomeDB:Q8L9T5
ProtClustDB:CLSN2913365 Genevestigator:Q8L9T5 GermOnline:AT3G16720
Uniprot:Q8L9T5
Length = 304
Score = 116 (45.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/90 (25%), Positives = 37/90 (41%)
Query: 114 KAANVSYXXXXXXXXXXXXVTRSINTQVLKLAPAIEGCSQQY-----CVICLEVMKEGSK 168
+A V + +R ++ V+K P + + C +CL +E
Sbjct: 72 RATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESET 131
Query: 169 AARMP-CSHIYHQDCLVNWLKNSSLCPLCR 197
+P C H +H DC+ W + S CPLCR
Sbjct: 132 GRVLPNCQHTFHVDCIDMWFHSHSTCPLCR 161
>TAIR|locus:2181032 [details] [associations]
symbol:DAFL2 "DAF-Like gene 2" species:3702 "Arabidopsis
thaliana" [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AL162351 EMBL:BT010682 EMBL:BT010973
IPI:IPI00526186 PIR:T48209 RefSeq:NP_195808.1 UniGene:At.33488
UniGene:At.70718 ProteinModelPortal:Q9LZV8 SMR:Q9LZV8
EnsemblPlants:AT5G01880.1 GeneID:831691 KEGG:ath:AT5G01880
TAIR:At5g01880 InParanoid:Q9LZV8 OMA:ATECAIC PhylomeDB:Q9LZV8
ProtClustDB:CLSN2916663 Genevestigator:Q9LZV8 GermOnline:AT5G01880
Uniprot:Q9LZV8
Length = 159
Score = 107 (42.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 156 CVICLEVMKEGSKAARMP-CSHIYHQDCLVNWLKNSSLCPLCRFQL 200
C ICL +G + +P C+H +H C+ WL + S CP CR L
Sbjct: 105 CAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>UNIPROTKB|Q96PM5 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0002039 "p53
binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IDA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR004039 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471057 GO:GO:0031398
GO:GO:0004842 GO:GO:0032436 Pathway_Interaction_DB:ar_tf_pathway
GO:GO:0000151 GO:GO:0042787 GO:GO:0051865 BRENDA:6.3.2.19
Gene3D:2.20.28.10 eggNOG:NOG325406 InterPro:IPR017921
PROSITE:PS51270 EMBL:GQ250944 EMBL:AF247041 EMBL:AF255666
EMBL:AF305424 EMBL:AB209072 EMBL:AY888047 EMBL:AK091501
EMBL:AC096759 EMBL:BC047393 IPI:IPI00289787 IPI:IPI00552384
IPI:IPI00552504 RefSeq:NP_001008925.1 RefSeq:NP_001009922.1
RefSeq:NP_056251.2 UniGene:Hs.48297 PDB:2JRJ PDB:2K2C PDB:2K2D
PDBsum:2JRJ PDBsum:2K2C PDBsum:2K2D ProteinModelPortal:Q96PM5
SMR:Q96PM5 DIP:DIP-43981N IntAct:Q96PM5 MINT:MINT-3057007
STRING:Q96PM5 PhosphoSite:Q96PM5 DMDM:32700008
REPRODUCTION-2DPAGE:Q96PM5 PaxDb:Q96PM5 PRIDE:Q96PM5 DNASU:25898
Ensembl:ENST00000324439 Ensembl:ENST00000505105
Ensembl:ENST00000513257 GeneID:25898 KEGG:hsa:25898 UCSC:uc003hij.3
UCSC:uc003hil.3 CTD:25898 GeneCards:GC04M076405 HGNC:HGNC:17479
HPA:HPA030339 MIM:607680 neXtProt:NX_Q96PM5 PharmGKB:PA38240
HOGENOM:HOG000231827 HOVERGEN:HBG062959 InParanoid:Q96PM5 KO:K10144
OMA:QYHCNGC OrthoDB:EOG4JWVDX PhylomeDB:Q96PM5 ChiTaRS:RCHY1
EvolutionaryTrace:Q96PM5 GenomeRNAi:25898 NextBio:47351
ArrayExpress:Q96PM5 Bgee:Q96PM5 CleanEx:HS_RCHY1
Genevestigator:Q96PM5 GermOnline:ENSG00000163743 Uniprot:Q96PM5
Length = 261
Score = 107 (42.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 148 IEGCSQQYCVICLEVMKEGSKAAR-MPCSHIYHQDCLVNWLKNSSLCPLC 196
IE S+Q C ICLE + A +PC H+ H+ C LK CPLC
Sbjct: 137 IENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 186
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 4 TAVFDEYQCDIYQPEDDD 21
+ +F EY CDI D D
Sbjct: 79 STLFGEYYCDICHLFDKD 96
>POMBASE|SPAP32A8.03c [details] [associations]
symbol:SPAP32A8.03c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAP32A8.03c Prosite:PS00518 EMBL:CU329670 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 eggNOG:NOG235630 RefSeq:NP_594179.1
ProteinModelPortal:Q9C1X4 EnsemblFungi:SPAP32A8.03c.1
GeneID:2542072 KEGG:spo:SPAP32A8.03c OMA:DIISQLM OrthoDB:EOG4GTPPN
NextBio:20803145 Uniprot:Q9C1X4
Length = 513
Score = 115 (45.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 156 CVICLEVMKEGSKAARMPCSHIYHQDCLVNWLKNSSLCPLCR 197
C IC+E+ K ++PC H +H++C+ WL+ + C +CR
Sbjct: 396 CTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437
Score = 39 (18.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 91 YAHSAANEYHNMGS 104
Y HS +NE+ G+
Sbjct: 9 YCHSCSNEFQRPGN 22
WARNING: HSPs involving 196 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.133 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 189 0.00089 110 3 11 22 0.39 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 446
No. of states in DFA: 611 (65 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.90u 0.10s 15.00t Elapsed: 00:00:01
Total cpu time: 14.91u 0.10s 15.01t Elapsed: 00:00:01
Start: Fri May 10 20:15:10 2013 End: Fri May 10 20:15:11 2013
WARNINGS ISSUED: 2