Query 042709
Match_columns 398
No_of_seqs 142 out of 1309
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 15:09:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.2E-64 4.2E-69 481.4 35.1 372 10-394 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.7E-58 5.9E-63 447.7 33.3 383 9-397 6-481 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 2.6E-58 8.7E-63 442.3 33.9 380 7-396 3-453 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 2.8E-56 9.5E-61 430.9 36.4 373 10-395 5-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.6E-55 1.6E-59 420.8 27.9 369 9-395 7-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3E-43 1E-47 336.7 31.1 348 8-389 9-416 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.1E-43 3.6E-48 337.2 15.9 307 10-374 21-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.6E-39 2.6E-43 305.2 26.4 311 12-374 1-384 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.5E-38 5.2E-43 303.2 27.0 331 11-394 20-413 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 4.5E-38 1.5E-42 298.6 26.9 334 9-395 2-399 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 8.1E-39 2.8E-43 305.1 18.4 326 12-395 1-401 (416)
12 2yjn_A ERYCIII, glycosyltransf 100.0 3.2E-38 1.1E-42 303.3 21.8 329 11-394 20-435 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 8.3E-38 2.8E-42 296.8 20.1 314 12-373 1-366 (404)
14 2p6p_A Glycosyl transferase; X 100.0 1.1E-36 3.7E-41 287.5 25.8 307 12-390 1-375 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.8E-36 6.2E-41 290.2 26.5 330 7-390 3-395 (430)
16 4fzr_A SSFS6; structural genom 100.0 1.1E-34 3.9E-39 274.9 18.9 313 10-387 14-393 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 6.8E-34 2.3E-38 269.6 22.4 308 11-389 20-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 7.6E-33 2.6E-37 261.7 24.9 313 11-390 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.7E-31 1.6E-35 251.1 23.2 323 11-393 20-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.9 8.2E-27 2.8E-31 217.7 16.0 303 10-374 1-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 9.5E-25 3.2E-29 181.5 11.8 138 233-374 8-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.2E-17 7.5E-22 153.9 19.8 327 12-395 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.5 7.4E-13 2.5E-17 117.5 13.9 64 270-337 210-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.3 1.2E-12 4.1E-17 111.5 4.0 71 274-355 120-196 (224)
25 3c48_A Predicted glycosyltrans 99.2 4.7E-09 1.6E-13 99.8 24.6 82 270-363 308-396 (438)
26 3okp_A GDP-mannose-dependent a 99.2 1.3E-09 4.5E-14 102.0 19.4 106 9-128 2-114 (394)
27 1v4v_A UDP-N-acetylglucosamine 99.2 2.9E-10 1E-14 106.0 14.0 84 270-367 257-343 (376)
28 2gek_A Phosphatidylinositol ma 99.0 4.2E-09 1.4E-13 99.0 15.7 83 270-364 265-355 (406)
29 3fro_A GLGA glycogen synthase; 99.0 3.4E-08 1.1E-12 93.7 20.6 108 271-395 314-429 (439)
30 3ot5_A UDP-N-acetylglucosamine 99.0 2.2E-09 7.5E-14 101.0 11.3 106 270-393 284-392 (403)
31 2jjm_A Glycosyl transferase, g 99.0 1.3E-07 4.4E-12 88.6 22.2 81 272-364 271-356 (394)
32 1vgv_A UDP-N-acetylglucosamine 99.0 6.1E-09 2.1E-13 97.2 13.1 81 270-364 265-348 (384)
33 2r60_A Glycosyl transferase, g 98.9 3.5E-07 1.2E-11 88.5 24.7 83 270-364 337-430 (499)
34 2iuy_A Avigt4, glycosyltransfe 98.9 8.4E-09 2.9E-13 94.7 11.5 83 270-369 214-315 (342)
35 3beo_A UDP-N-acetylglucosamine 98.9 2.8E-08 9.5E-13 92.4 14.8 82 270-365 265-349 (375)
36 3dzc_A UDP-N-acetylglucosamine 98.8 1.6E-08 5.5E-13 94.9 11.2 84 270-367 290-376 (396)
37 2iw1_A Lipopolysaccharide core 98.8 1.8E-06 6.1E-11 79.9 23.6 86 271-367 256-346 (374)
38 2x6q_A Trehalose-synthase TRET 98.8 5E-07 1.7E-11 85.2 19.0 81 270-364 295-385 (416)
39 3s28_A Sucrose synthase 1; gly 98.6 1.1E-05 3.8E-10 81.7 23.2 69 284-364 664-740 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.3 2.7E-06 9.1E-11 79.2 11.4 98 278-392 276-373 (385)
41 2qzs_A Glycogen synthase; glyc 98.3 0.00015 5.2E-09 69.5 22.0 98 280-395 362-475 (485)
42 1rzu_A Glycogen synthase 1; gl 98.2 6.5E-05 2.2E-09 72.2 18.1 98 280-395 361-474 (485)
43 2vsy_A XCC0866; transferase, g 97.9 0.005 1.7E-07 60.1 25.8 88 270-366 436-530 (568)
44 2hy7_A Glucuronosyltransferase 97.8 0.00074 2.5E-08 63.2 17.2 73 270-360 267-354 (406)
45 2f9f_A First mannosyl transfer 97.7 4.7E-05 1.6E-09 62.4 5.3 79 279-370 92-175 (177)
46 2bfw_A GLGA glycogen synthase; 96.6 0.0071 2.4E-07 50.0 8.5 82 270-364 97-187 (200)
47 3rhz_A GTF3, nucleotide sugar 96.6 0.0014 4.8E-08 59.6 4.0 106 270-391 216-335 (339)
48 4gyw_A UDP-N-acetylglucosamine 96.5 0.018 6.1E-07 57.9 12.1 42 271-314 583-630 (723)
49 2xci_A KDO-transferase, 3-deox 96.5 0.0046 1.6E-07 57.1 6.9 81 280-371 273-362 (374)
50 3qhp_A Type 1 capsular polysac 96.4 0.043 1.5E-06 43.6 11.5 101 248-364 33-146 (166)
51 3q3e_A HMW1C-like glycosyltran 96.1 0.016 5.6E-07 56.3 8.5 88 270-366 501-596 (631)
52 3oy2_A Glycosyltransferase B73 96.0 0.015 5E-07 54.2 7.8 105 274-395 260-389 (413)
53 2phj_A 5'-nucleotidase SURE; S 94.9 0.13 4.5E-06 43.9 8.9 111 12-131 2-127 (251)
54 3ty2_A 5'-nucleotidase SURE; s 94.7 0.061 2.1E-06 46.1 6.4 112 10-132 10-136 (261)
55 2wqk_A 5'-nucleotidase SURE; S 93.9 0.25 8.6E-06 42.3 8.6 111 12-131 2-127 (251)
56 1psw_A ADP-heptose LPS heptosy 93.4 0.61 2.1E-05 42.0 11.0 101 12-128 1-106 (348)
57 1j9j_A Stationary phase surviV 91.4 1 3.5E-05 38.4 8.9 112 12-131 1-128 (247)
58 2x0d_A WSAF; GT4 family, trans 91.3 0.099 3.4E-06 48.8 2.9 82 270-364 297-385 (413)
59 1l5x_A SurviVal protein E; str 91.2 0.56 1.9E-05 40.7 7.3 113 12-132 1-128 (280)
60 2e6c_A 5'-nucleotidase SURE; S 91.2 1 3.5E-05 38.3 8.7 111 12-131 1-129 (244)
61 3tov_A Glycosyl transferase fa 90.8 0.53 1.8E-05 42.6 7.3 105 9-128 6-115 (349)
62 1ccw_A Protein (glutamate muta 90.8 0.48 1.7E-05 36.4 6.0 45 9-53 1-45 (137)
63 3vue_A GBSS-I, granule-bound s 88.9 0.43 1.5E-05 46.1 5.2 70 281-357 398-476 (536)
64 2x0d_A WSAF; GT4 family, trans 88.6 0.21 7.2E-06 46.5 2.7 40 10-49 45-89 (413)
65 1g5t_A COB(I)alamin adenosyltr 88.5 2.1 7.1E-05 35.0 8.3 94 11-113 28-131 (196)
66 2v4n_A Multifunctional protein 87.9 1.6 5.5E-05 37.3 7.5 109 12-131 2-126 (254)
67 3zqu_A Probable aromatic acid 85.7 1.3 4.6E-05 36.6 5.7 47 10-57 3-49 (209)
68 1mvl_A PPC decarboxylase athal 83.5 1.2 4.2E-05 36.8 4.5 48 8-57 16-63 (209)
69 2bw0_A 10-FTHFDH, 10-formyltet 83.3 4.3 0.00015 36.2 8.3 105 7-134 18-132 (329)
70 3nb0_A Glycogen [starch] synth 82.8 4.6 0.00016 39.8 8.8 75 274-356 499-592 (725)
71 3eag_A UDP-N-acetylmuramate:L- 82.3 8.5 0.00029 34.2 10.0 34 11-48 4-37 (326)
72 4dzz_A Plasmid partitioning pr 82.0 11 0.00036 30.5 9.9 40 12-51 1-42 (206)
73 2pn1_A Carbamoylphosphate synt 81.6 2.1 7.3E-05 38.0 5.8 35 9-49 2-38 (331)
74 4dim_A Phosphoribosylglycinami 81.6 12 0.0004 34.3 11.0 88 9-125 5-97 (403)
75 1sbz_A Probable aromatic acid 81.5 2 6.9E-05 35.2 5.0 45 12-57 1-46 (197)
76 1id1_A Putative potassium chan 81.5 1.3 4.4E-05 34.5 3.8 35 9-48 1-35 (153)
77 3lqk_A Dipicolinate synthase s 81.3 1.7 5.8E-05 35.7 4.6 45 9-54 5-50 (201)
78 2yxb_A Coenzyme B12-dependent 81.0 2.2 7.4E-05 33.7 5.0 43 10-52 17-59 (161)
79 3fgn_A Dethiobiotin synthetase 81.0 25 0.00085 29.9 13.0 119 11-135 25-169 (251)
80 2ejb_A Probable aromatic acid 80.9 3.4 0.00012 33.6 6.2 44 12-56 2-45 (189)
81 3qjg_A Epidermin biosynthesis 80.5 1.9 6.6E-05 34.5 4.5 43 12-55 6-48 (175)
82 3mcu_A Dipicolinate synthase, 80.1 1.8 6E-05 35.8 4.3 43 9-52 3-46 (207)
83 1y80_A Predicted cobalamin bin 79.5 3.5 0.00012 34.1 6.0 44 11-54 88-131 (210)
84 3dm5_A SRP54, signal recogniti 79.3 3 0.0001 38.9 6.1 92 11-112 100-192 (443)
85 1kjn_A MTH0777; hypotethical p 79.0 4.7 0.00016 30.9 5.8 46 12-57 7-54 (157)
86 3ghy_A Ketopantoate reductase 78.6 2.6 8.7E-05 37.8 5.3 44 9-57 1-44 (335)
87 3q0i_A Methionyl-tRNA formyltr 76.3 12 0.00042 33.1 8.9 98 9-134 5-118 (318)
88 2i2x_B MTAC, methyltransferase 76.1 4.5 0.00015 34.7 5.9 40 10-49 122-161 (258)
89 3vot_A L-amino acid ligase, BL 75.3 7.6 0.00026 35.9 7.7 95 10-126 4-101 (425)
90 1p3y_1 MRSD protein; flavoprot 74.8 1.8 6E-05 35.4 2.8 47 9-56 6-52 (194)
91 3t5t_A Putative glycosyltransf 73.8 11 0.00039 35.6 8.4 104 274-396 358-473 (496)
92 4gi5_A Quinone reductase; prot 73.6 5.7 0.00019 34.5 5.9 40 7-46 18-60 (280)
93 3mc3_A DSRE/DSRF-like family p 73.1 6.6 0.00023 29.7 5.6 46 11-56 15-63 (134)
94 3vue_A GBSS-I, granule-bound s 72.9 10 0.00034 36.5 8.0 38 11-48 9-52 (536)
95 2b8t_A Thymidine kinase; deoxy 72.7 15 0.00052 30.5 8.2 105 11-131 11-124 (223)
96 3ezx_A MMCP 1, monomethylamine 72.0 6.9 0.00024 32.4 5.9 45 10-54 91-135 (215)
97 1qzu_A Hypothetical protein MD 71.4 2.4 8.2E-05 35.0 2.8 49 8-57 16-65 (206)
98 3q9l_A Septum site-determining 71.4 14 0.00049 31.1 8.0 38 12-49 2-41 (260)
99 1uqt_A Alpha, alpha-trehalose- 71.2 22 0.00074 33.6 9.8 104 273-396 337-454 (482)
100 2q5c_A NTRC family transcripti 70.8 13 0.00043 30.3 7.1 35 100-137 139-174 (196)
101 2gt1_A Lipopolysaccharide hept 69.1 5.1 0.00017 35.5 4.8 46 12-57 1-48 (326)
102 1e2b_A Enzyme IIB-cellobiose; 68.4 10 0.00035 27.4 5.4 39 9-47 1-39 (106)
103 3gpi_A NAD-dependent epimerase 67.4 6.7 0.00023 33.8 5.1 35 9-48 1-35 (286)
104 3u7q_B Nitrogenase molybdenum- 66.7 9.9 0.00034 36.3 6.4 96 10-130 363-470 (523)
105 2ew2_A 2-dehydropantoate 2-red 66.6 8.8 0.0003 33.5 5.8 42 11-57 3-45 (316)
106 2g1u_A Hypothetical protein TM 66.4 7.5 0.00026 30.1 4.7 36 8-48 16-51 (155)
107 1bg6_A N-(1-D-carboxylethyl)-L 65.7 4.9 0.00017 36.1 4.0 44 9-57 2-46 (359)
108 3kl4_A SRP54, signal recogniti 64.7 13 0.00044 34.6 6.6 90 13-112 99-189 (433)
109 3hn7_A UDP-N-acetylmuramate-L- 64.6 38 0.0013 32.2 10.2 35 10-48 18-52 (524)
110 1lss_A TRK system potassium up 64.1 7 0.00024 29.2 4.1 33 11-48 4-36 (140)
111 2vo1_A CTP synthase 1; pyrimid 63.9 8.2 0.00028 33.0 4.6 45 8-52 19-66 (295)
112 2r85_A PURP protein PF1517; AT 63.2 7.6 0.00026 34.3 4.7 35 11-51 2-36 (334)
113 3auf_A Glycinamide ribonucleot 63.1 34 0.0012 28.5 8.4 105 9-133 20-133 (229)
114 4b4o_A Epimerase family protei 63.1 6 0.00021 34.4 4.0 32 12-47 1-32 (298)
115 3tov_A Glycosyl transferase fa 63.0 64 0.0022 28.7 10.9 102 11-133 185-290 (349)
116 3pdi_A Nitrogenase MOFE cofact 62.6 28 0.00097 32.8 8.7 91 10-130 331-426 (483)
117 1g63_A Epidermin modifying enz 62.6 6.2 0.00021 31.8 3.5 44 12-56 3-46 (181)
118 3i83_A 2-dehydropantoate 2-red 62.6 13 0.00044 32.8 6.1 40 12-57 3-42 (320)
119 3hwr_A 2-dehydropantoate 2-red 62.5 10 0.00035 33.5 5.4 43 10-57 18-60 (318)
120 3hn2_A 2-dehydropantoate 2-red 62.5 14 0.00048 32.4 6.3 40 12-57 3-42 (312)
121 2vrn_A Protease I, DR1199; cys 62.3 18 0.00063 28.9 6.5 43 6-49 4-46 (190)
122 2r8r_A Sensor protein; KDPD, P 61.3 11 0.00037 31.6 4.9 39 11-49 6-44 (228)
123 3alj_A 2-methyl-3-hydroxypyrid 61.0 6.6 0.00023 35.6 4.0 42 1-47 1-42 (379)
124 3e5n_A D-alanine-D-alanine lig 60.7 4.7 0.00016 36.9 2.8 44 5-48 16-63 (386)
125 3kkl_A Probable chaperone prot 60.6 14 0.00049 31.2 5.7 41 9-49 1-52 (244)
126 1psw_A ADP-heptose LPS heptosy 60.1 88 0.003 27.4 12.4 101 12-132 181-289 (348)
127 2ywr_A Phosphoribosylglycinami 59.9 54 0.0018 27.0 9.0 102 12-133 2-112 (216)
128 3pdi_B Nitrogenase MOFE cofact 59.7 12 0.00041 35.0 5.5 88 10-130 312-400 (458)
129 1fmt_A Methionyl-tRNA FMet for 59.1 36 0.0012 30.0 8.2 97 10-134 2-114 (314)
130 1f0y_A HCDH, L-3-hydroxyacyl-C 58.9 6.4 0.00022 34.5 3.3 38 4-48 10-47 (302)
131 1qgu_B Protein (nitrogenase mo 58.1 15 0.00052 35.0 6.0 99 10-129 359-465 (519)
132 3oy2_A Glycosyltransferase B73 57.4 8.8 0.0003 35.0 4.2 38 12-50 1-41 (413)
133 3u7q_A Nitrogenase molybdenum- 57.1 44 0.0015 31.5 9.0 94 10-130 347-442 (492)
134 2qs7_A Uncharacterized protein 57.0 12 0.00041 28.7 4.2 44 13-56 9-53 (144)
135 3kjh_A CO dehydrogenase/acetyl 56.0 8.7 0.0003 32.2 3.6 38 12-49 1-38 (254)
136 2xxa_A Signal recognition part 55.8 30 0.001 32.1 7.5 40 13-52 102-142 (433)
137 3av3_A Phosphoribosylglycinami 55.1 43 0.0015 27.5 7.6 102 12-133 4-114 (212)
138 3ulk_A Ketol-acid reductoisome 54.9 31 0.0011 32.0 7.0 36 8-48 34-69 (491)
139 3llv_A Exopolyphosphatase-rela 54.6 9.2 0.00031 28.8 3.2 33 11-48 6-38 (141)
140 2yvq_A Carbamoyl-phosphate syn 54.5 27 0.00091 26.7 5.8 95 15-128 27-130 (143)
141 1jx7_A Hypothetical protein YC 54.4 16 0.00056 26.4 4.5 43 12-54 2-49 (117)
142 2gk4_A Conserved hypothetical 54.4 23 0.00079 29.6 5.8 22 28-49 32-53 (232)
143 3lrx_A Putative hydrogenase; a 53.5 14 0.00046 28.8 4.1 38 11-51 23-60 (158)
144 4hv4_A UDP-N-acetylmuramate--L 53.4 75 0.0026 29.9 10.0 33 11-47 22-54 (494)
145 4ds3_A Phosphoribosylglycinami 53.3 26 0.00088 28.8 5.8 107 6-132 2-117 (209)
146 1efp_B ETF, protein (electron 53.2 66 0.0023 27.2 8.6 97 28-132 42-149 (252)
147 1rw7_A YDR533CP; alpha-beta sa 52.9 29 0.00099 29.1 6.4 38 12-49 4-52 (243)
148 4hb9_A Similarities with proba 52.8 10 0.00035 34.4 3.8 29 12-45 2-30 (412)
149 3o26_A Salutaridine reductase; 52.7 16 0.00055 31.6 5.0 42 4-48 4-45 (311)
150 3da8_A Probable 5'-phosphoribo 52.6 46 0.0016 27.5 7.3 110 5-133 6-121 (215)
151 2xj4_A MIPZ; replication, cell 52.1 16 0.00056 31.5 4.8 41 9-49 1-43 (286)
152 2hy5_A Putative sulfurtransfer 52.0 24 0.0008 26.3 5.1 42 13-54 2-47 (130)
153 3e8x_A Putative NAD-dependent 51.9 23 0.00079 29.2 5.6 39 7-49 17-55 (236)
154 3bul_A Methionine synthase; tr 51.9 21 0.00073 34.4 5.8 44 11-54 98-141 (579)
155 1ehi_A LMDDL2, D-alanine:D-lac 51.9 13 0.00044 33.7 4.3 40 9-48 1-45 (377)
156 1p9o_A Phosphopantothenoylcyst 51.8 11 0.00038 33.2 3.6 41 9-49 34-89 (313)
157 4huj_A Uncharacterized protein 51.8 8.6 0.00029 31.9 2.8 35 8-47 20-54 (220)
158 1o97_C Electron transferring f 51.7 58 0.002 27.8 8.1 92 28-131 42-147 (264)
159 1z82_A Glycerol-3-phosphate de 51.7 12 0.00041 33.3 4.0 44 8-57 12-56 (335)
160 3l3b_A ES1 family protein; ssg 51.5 29 0.00099 29.2 6.1 46 3-50 16-66 (242)
161 3n7t_A Macrophage binding prot 51.4 30 0.001 29.3 6.2 38 12-49 10-58 (247)
162 3dfu_A Uncharacterized protein 51.4 10 0.00034 31.9 3.1 33 11-48 6-38 (232)
163 3k96_A Glycerol-3-phosphate de 50.8 11 0.00037 34.0 3.5 43 10-57 28-71 (356)
164 3g0o_A 3-hydroxyisobutyrate de 50.4 10 0.00035 33.2 3.2 34 10-48 6-39 (303)
165 3fwy_A Light-independent proto 50.2 18 0.00062 31.9 4.8 45 5-49 39-86 (314)
166 1gsa_A Glutathione synthetase; 50.0 16 0.00055 31.7 4.5 37 12-48 2-41 (316)
167 1mio_A Nitrogenase molybdenum 49.9 41 0.0014 32.1 7.5 36 10-50 334-369 (533)
168 2iz6_A Molybdenum cofactor car 49.7 21 0.00071 28.5 4.6 28 288-315 110-140 (176)
169 3obb_A Probable 3-hydroxyisobu 49.4 15 0.00051 32.2 4.1 31 12-47 4-34 (300)
170 1hdo_A Biliverdin IX beta redu 49.3 31 0.0011 27.4 5.9 36 9-48 1-36 (206)
171 2iz1_A 6-phosphogluconate dehy 49.1 10 0.00035 35.7 3.2 35 8-47 2-36 (474)
172 4e21_A 6-phosphogluconate dehy 49.0 14 0.00048 33.3 4.0 35 9-48 20-54 (358)
173 3fwz_A Inner membrane protein 48.9 11 0.00038 28.5 2.8 34 11-49 7-40 (140)
174 4dll_A 2-hydroxy-3-oxopropiona 48.7 20 0.00069 31.6 4.9 34 10-48 30-63 (320)
175 3qha_A Putative oxidoreductase 48.6 9.9 0.00034 33.2 2.8 33 11-48 15-47 (296)
176 3ih5_A Electron transfer flavo 48.5 29 0.00098 28.7 5.5 108 12-131 4-123 (217)
177 2d1p_A TUSD, hypothetical UPF0 48.4 33 0.0011 26.0 5.4 43 11-53 12-58 (140)
178 1pno_A NAD(P) transhydrogenase 48.2 21 0.00071 27.9 4.1 40 10-49 22-64 (180)
179 2j37_W Signal recognition part 47.8 43 0.0015 31.7 7.2 40 12-51 102-141 (504)
180 3ego_A Probable 2-dehydropanto 47.7 22 0.00076 31.1 5.0 41 11-57 2-43 (307)
181 1d4o_A NADP(H) transhydrogenas 47.3 22 0.00074 27.9 4.1 39 11-49 22-63 (184)
182 4e3z_A Putative oxidoreductase 46.9 31 0.0011 29.3 5.8 39 6-47 20-58 (272)
183 1u7z_A Coenzyme A biosynthesis 46.5 22 0.00075 29.6 4.4 39 9-49 6-58 (226)
184 3lk7_A UDP-N-acetylmuramoylala 46.2 43 0.0015 31.1 7.0 34 9-47 7-40 (451)
185 2p22_C Protein SRN2; endosome, 46.2 22 0.00077 28.7 4.3 51 341-398 122-172 (192)
186 3h8v_A Ubiquitin-like modifier 45.8 91 0.0031 27.0 8.5 116 6-131 31-170 (292)
187 1xp8_A RECA protein, recombina 45.8 81 0.0028 28.4 8.5 88 12-113 75-163 (366)
188 3ezl_A Acetoacetyl-COA reducta 45.6 1.2E+02 0.0041 25.1 9.3 37 7-46 8-44 (256)
189 4gbj_A 6-phosphogluconate dehy 45.5 21 0.00072 31.1 4.4 33 8-46 3-35 (297)
190 1e4e_A Vancomycin/teicoplanin 45.4 12 0.00042 33.3 3.0 39 9-47 1-43 (343)
191 2i87_A D-alanine-D-alanine lig 45.4 9.4 0.00032 34.4 2.2 40 9-48 1-44 (364)
192 2pzm_A Putative nucleotide sug 45.0 17 0.00057 32.1 3.8 38 6-47 15-52 (330)
193 2fsv_C NAD(P) transhydrogenase 44.8 24 0.00083 28.3 4.1 39 11-49 46-87 (203)
194 3zzm_A Bifunctional purine bio 44.8 43 0.0015 31.5 6.4 55 12-81 10-66 (523)
195 3of5_A Dethiobiotin synthetase 44.8 24 0.0008 29.4 4.5 36 11-46 3-40 (228)
196 3pid_A UDP-glucose 6-dehydroge 44.7 17 0.00057 33.8 3.8 40 3-48 28-67 (432)
197 1ks9_A KPA reductase;, 2-dehyd 44.3 20 0.00067 30.8 4.1 32 12-48 1-32 (291)
198 1j2m_A CPI-17, 17-kDa PKC-pote 44.3 14 0.00048 26.0 2.4 42 354-398 58-99 (99)
199 3l18_A Intracellular protease 44.3 57 0.0019 25.2 6.5 39 10-49 1-39 (168)
200 2a5l_A Trp repressor binding p 44.0 31 0.0011 27.6 5.0 40 9-48 3-43 (200)
201 1djl_A Transhydrogenase DIII; 43.9 25 0.00087 28.2 4.1 39 11-49 45-86 (207)
202 3qxc_A Dethiobiotin synthetase 43.8 25 0.00087 29.6 4.5 38 9-46 18-57 (242)
203 2qyt_A 2-dehydropantoate 2-red 43.5 14 0.00048 32.3 3.0 41 11-56 8-54 (317)
204 1j8m_F SRP54, signal recogniti 43.3 78 0.0027 27.5 7.8 40 12-51 99-138 (297)
205 2bi7_A UDP-galactopyranose mut 43.2 19 0.00065 32.7 3.9 35 9-48 1-35 (384)
206 4eg0_A D-alanine--D-alanine li 43.0 45 0.0015 29.1 6.3 42 7-49 10-55 (317)
207 2zyd_A 6-phosphogluconate dehy 42.8 13 0.00045 35.1 2.8 39 4-47 8-46 (480)
208 2x5n_A SPRPN10, 26S proteasome 42.7 1E+02 0.0034 24.7 7.9 61 12-77 107-173 (192)
209 2xdq_B Light-independent proto 42.6 1.1E+02 0.0037 28.9 9.3 94 8-130 300-397 (511)
210 4g6h_A Rotenone-insensitive NA 42.6 13 0.00045 35.2 2.8 35 10-49 41-75 (502)
211 3lyu_A Putative hydrogenase; t 42.5 20 0.00067 27.3 3.3 38 11-51 18-55 (142)
212 1g3q_A MIND ATPase, cell divis 42.5 29 0.00099 28.6 4.7 38 12-49 2-41 (237)
213 1yt5_A Inorganic polyphosphate 42.4 11 0.00037 32.2 2.0 53 284-358 41-96 (258)
214 3dtt_A NADP oxidoreductase; st 42.3 23 0.0008 29.7 4.1 36 8-48 16-51 (245)
215 3doj_A AT3G25530, dehydrogenas 42.2 26 0.00089 30.6 4.6 33 11-48 21-53 (310)
216 3zq6_A Putative arsenical pump 42.2 27 0.00092 30.8 4.7 38 12-49 14-52 (324)
217 2lnd_A De novo designed protei 42.1 12 0.0004 25.1 1.6 49 304-357 49-100 (112)
218 1efv_B Electron transfer flavo 42.1 60 0.002 27.5 6.6 97 28-132 45-152 (255)
219 3sbx_A Putative uncharacterize 42.1 32 0.0011 27.8 4.6 38 10-48 12-53 (189)
220 2raf_A Putative dinucleotide-b 42.0 24 0.00082 28.8 4.0 32 11-47 19-50 (209)
221 4e12_A Diketoreductase; oxidor 41.6 24 0.00082 30.4 4.2 35 9-48 2-36 (283)
222 3i6i_A Putative leucoanthocyan 41.4 30 0.001 30.6 4.9 100 6-129 5-117 (346)
223 3ouz_A Biotin carboxylase; str 41.2 63 0.0022 29.8 7.3 36 9-49 4-39 (446)
224 3ot1_A 4-methyl-5(B-hydroxyeth 41.2 52 0.0018 26.7 6.0 41 6-48 5-45 (208)
225 1q57_A DNA primase/helicase; d 41.1 1.5E+02 0.005 27.9 9.9 44 11-54 242-286 (503)
226 2rir_A Dipicolinate synthase, 41.0 42 0.0015 29.1 5.7 33 9-46 5-37 (300)
227 2bru_C NAD(P) transhydrogenase 41.0 24 0.00081 27.7 3.4 39 11-49 30-71 (186)
228 3gg2_A Sugar dehydrogenase, UD 40.9 21 0.00074 33.2 4.0 32 12-48 3-34 (450)
229 2vns_A Metalloreductase steap3 40.9 20 0.00067 29.5 3.4 33 10-47 27-59 (215)
230 3qsg_A NAD-binding phosphogluc 40.9 20 0.0007 31.4 3.7 33 11-48 24-57 (312)
231 3ug7_A Arsenical pump-driving 40.6 34 0.0012 30.6 5.1 39 12-50 26-65 (349)
232 2o1e_A YCDH; alpha-beta protei 40.5 1.1E+02 0.0037 26.8 8.3 79 39-131 189-270 (312)
233 1oi4_A Hypothetical protein YH 40.4 65 0.0022 25.7 6.4 44 5-49 16-60 (193)
234 3c85_A Putative glutathione-re 40.4 20 0.00068 28.4 3.2 36 8-48 36-72 (183)
235 3gi1_A LBP, laminin-binding pr 40.3 57 0.0019 28.2 6.4 78 39-130 178-258 (286)
236 2h78_A Hibadh, 3-hydroxyisobut 40.1 25 0.00085 30.5 4.1 32 12-48 4-35 (302)
237 3l4b_C TRKA K+ channel protien 40.1 13 0.00043 30.6 2.1 32 12-48 1-32 (218)
238 3iqw_A Tail-anchored protein t 40.1 25 0.00086 31.3 4.1 42 11-52 15-57 (334)
239 3l6d_A Putative oxidoreductase 40.1 16 0.00056 31.9 2.9 33 10-47 8-40 (306)
240 2hmt_A YUAA protein; RCK, KTN, 40.0 19 0.00064 26.8 2.9 33 11-48 6-38 (144)
241 1txg_A Glycerol-3-phosphate de 40.0 27 0.00093 30.7 4.4 31 12-47 1-31 (335)
242 1y1p_A ARII, aldehyde reductas 40.0 29 0.00098 30.4 4.6 41 4-48 4-44 (342)
243 2q62_A ARSH; alpha/beta, flavo 39.8 37 0.0013 28.6 4.9 41 7-47 30-73 (247)
244 3m1a_A Putative dehydrogenase; 39.7 1.6E+02 0.0056 24.7 9.4 34 12-48 5-38 (281)
245 3pgx_A Carveol dehydrogenase; 39.4 1.3E+02 0.0044 25.4 8.6 33 12-47 15-47 (280)
246 3aek_B Light-independent proto 38.9 1.1E+02 0.0037 29.1 8.6 94 8-130 277-374 (525)
247 3e2i_A Thymidine kinase; Zn-bi 38.8 1.6E+02 0.0056 24.2 8.6 39 11-49 27-66 (219)
248 2rcy_A Pyrroline carboxylate r 38.8 12 0.00042 31.7 1.8 34 9-47 2-39 (262)
249 3ew7_A LMO0794 protein; Q8Y8U8 38.6 28 0.00094 28.2 4.0 33 12-48 1-33 (221)
250 3i12_A D-alanine-D-alanine lig 38.5 17 0.00059 32.7 2.8 40 9-48 1-44 (364)
251 1i36_A Conserved hypothetical 38.2 24 0.00081 29.9 3.6 31 12-47 1-31 (264)
252 3g1w_A Sugar ABC transporter; 38.2 1.8E+02 0.0062 24.5 9.9 37 10-46 3-41 (305)
253 3bfv_A CAPA1, CAPB2, membrane 38.2 24 0.00081 30.3 3.5 41 10-50 80-122 (271)
254 2a33_A Hypothetical protein; s 38.2 45 0.0015 27.5 5.1 37 12-48 14-54 (215)
255 4fu0_A D-alanine--D-alanine li 37.9 18 0.00062 32.5 2.8 38 9-46 1-42 (357)
256 3f6r_A Flavodoxin; FMN binding 37.5 46 0.0016 25.1 4.8 38 12-49 2-40 (148)
257 3pdu_A 3-hydroxyisobutyrate de 37.5 27 0.00093 30.0 3.9 32 12-48 2-33 (287)
258 3ib6_A Uncharacterized protein 37.5 1.5E+02 0.005 23.2 11.2 98 28-132 39-144 (189)
259 1xrs_B D-lysine 5,6-aminomutas 37.3 21 0.0007 30.6 2.9 45 10-54 119-172 (262)
260 3lp8_A Phosphoribosylamine-gly 37.3 99 0.0034 28.5 7.9 94 2-127 13-111 (442)
261 1qkk_A DCTD, C4-dicarboxylate 37.2 92 0.0031 23.1 6.7 59 305-369 74-132 (155)
262 2l2q_A PTS system, cellobiose- 37.2 38 0.0013 24.3 4.0 33 12-44 5-37 (109)
263 3foj_A Uncharacterized protein 37.1 85 0.0029 21.7 5.9 35 9-47 54-88 (100)
264 1z45_A GAL10 bifunctional prot 37.1 42 0.0014 33.2 5.6 43 1-47 1-43 (699)
265 1jkx_A GART;, phosphoribosylgl 37.0 1.7E+02 0.0058 23.8 9.1 102 12-133 1-111 (212)
266 1qyd_A Pinoresinol-lariciresin 37.0 35 0.0012 29.5 4.6 34 11-48 4-37 (313)
267 3cky_A 2-hydroxymethyl glutara 37.0 40 0.0014 29.1 4.9 33 10-47 3-35 (301)
268 2woo_A ATPase GET3; tail-ancho 36.5 36 0.0012 30.1 4.6 39 12-50 19-58 (329)
269 2d1p_B TUSC, hypothetical UPF0 36.5 52 0.0018 23.9 4.8 41 14-54 4-47 (119)
270 1tvm_A PTS system, galactitol- 36.4 59 0.002 23.5 5.0 37 10-46 20-57 (113)
271 3hr8_A Protein RECA; alpha and 36.4 1E+02 0.0035 27.6 7.5 40 13-52 63-102 (356)
272 1yb4_A Tartronic semialdehyde 36.3 34 0.0012 29.4 4.3 31 11-46 3-33 (295)
273 2b69_A UDP-glucuronate decarbo 36.1 52 0.0018 28.9 5.6 38 6-47 22-59 (343)
274 2ixd_A LMBE-related protein; h 36.1 38 0.0013 28.5 4.4 94 9-109 1-104 (242)
275 3h2s_A Putative NADH-flavin re 35.9 32 0.0011 27.9 4.0 33 12-48 1-33 (224)
276 3c24_A Putative oxidoreductase 35.8 31 0.0011 29.6 4.0 31 12-47 12-43 (286)
277 1wcv_1 SOJ, segregation protei 35.8 35 0.0012 28.7 4.2 40 11-50 5-46 (257)
278 1dhr_A Dihydropteridine reduct 35.7 43 0.0015 27.8 4.7 36 9-47 4-39 (241)
279 3sju_A Keto reductase; short-c 35.7 40 0.0014 28.8 4.6 37 9-48 21-57 (279)
280 1evy_A Glycerol-3-phosphate de 35.7 13 0.00044 33.5 1.5 31 13-48 17-47 (366)
281 1ydh_A AT5G11950; structural g 35.7 53 0.0018 27.1 5.1 42 5-48 5-50 (216)
282 2c5m_A CTP synthase; cytidine 35.6 36 0.0012 28.9 3.9 42 10-51 21-65 (294)
283 3igf_A ALL4481 protein; two-do 35.5 26 0.00091 31.7 3.5 36 12-47 2-38 (374)
284 1mxh_A Pteridine reductase 2; 35.2 45 0.0015 28.3 4.9 38 6-47 6-43 (276)
285 3pnx_A Putative sulfurtransfer 35.2 63 0.0022 25.2 5.2 49 9-57 2-51 (160)
286 2xci_A KDO-transferase, 3-deox 34.9 58 0.002 29.2 5.8 37 11-49 40-76 (374)
287 3pef_A 6-phosphogluconate dehy 34.8 37 0.0013 29.2 4.3 32 12-48 2-33 (287)
288 2z1m_A GDP-D-mannose dehydrata 34.7 53 0.0018 28.6 5.5 36 9-48 1-36 (345)
289 4dgk_A Phytoene dehydrogenase; 34.6 20 0.00067 33.7 2.6 29 12-45 2-30 (501)
290 3ius_A Uncharacterized conserv 34.5 57 0.002 27.6 5.5 33 12-49 6-38 (286)
291 3to5_A CHEY homolog; alpha(5)b 34.2 39 0.0013 25.4 3.8 31 103-133 58-97 (134)
292 3nbm_A PTS system, lactose-spe 34.2 41 0.0014 24.2 3.7 37 10-46 5-41 (108)
293 4g9b_A Beta-PGM, beta-phosphog 34.1 1.6E+02 0.0055 24.0 8.2 94 28-132 100-195 (243)
294 2dpo_A L-gulonate 3-dehydrogen 34.1 30 0.001 30.6 3.5 35 9-48 4-38 (319)
295 3ff5_A PEX14P, peroxisomal bio 34.0 47 0.0016 20.5 3.3 45 344-391 8-52 (54)
296 3h5n_A MCCB protein; ubiquitin 34.0 1.2E+02 0.0043 26.9 7.7 38 6-48 113-151 (353)
297 1kjq_A GART 2, phosphoribosylg 34.0 38 0.0013 30.5 4.5 34 11-49 11-44 (391)
298 1cp2_A CP2, nitrogenase iron p 33.8 37 0.0012 28.7 4.1 36 13-48 3-38 (269)
299 3l77_A Short-chain alcohol deh 33.7 51 0.0018 27.0 4.9 34 12-48 2-35 (235)
300 2ffh_A Protein (FFH); SRP54, s 33.7 1.4E+02 0.0047 27.5 8.1 90 12-111 99-189 (425)
301 1iow_A DD-ligase, DDLB, D-ALA\ 33.6 73 0.0025 27.3 6.1 38 11-48 2-43 (306)
302 2wsb_A Galactitol dehydrogenas 33.5 82 0.0028 26.0 6.2 36 9-48 9-44 (254)
303 4gwg_A 6-phosphogluconate dehy 33.5 25 0.00086 33.1 3.1 35 9-48 2-36 (484)
304 1mio_B Nitrogenase molybdenum 33.5 1.1E+02 0.0037 28.5 7.5 98 10-130 311-410 (458)
305 3qvo_A NMRA family protein; st 33.4 23 0.00077 29.4 2.6 20 29-48 37-57 (236)
306 2vpq_A Acetyl-COA carboxylase; 33.4 93 0.0032 28.6 7.1 33 12-49 2-34 (451)
307 4hcj_A THIJ/PFPI domain protei 33.4 85 0.0029 24.8 5.9 38 12-50 8-46 (177)
308 4g65_A TRK system potassium up 33.2 11 0.00039 35.3 0.7 33 11-48 3-35 (461)
309 1jay_A Coenzyme F420H2:NADP+ o 33.2 36 0.0012 27.5 3.8 32 12-48 1-33 (212)
310 3lzw_A Ferredoxin--NADP reduct 33.1 19 0.00064 31.5 2.1 34 11-49 7-40 (332)
311 3o1l_A Formyltetrahydrofolate 32.9 1.9E+02 0.0066 25.1 8.5 109 4-132 98-212 (302)
312 4dlp_A Aminoacyl-tRNA syntheta 32.8 42 0.0014 32.1 4.6 42 7-48 20-71 (536)
313 3f1l_A Uncharacterized oxidore 32.8 67 0.0023 26.8 5.5 34 12-48 12-45 (252)
314 3dqz_A Alpha-hydroxynitrIle ly 32.8 27 0.00092 28.6 3.0 37 13-49 5-41 (258)
315 2vou_A 2,6-dihydroxypyridine h 32.8 38 0.0013 30.6 4.2 34 9-47 3-36 (397)
316 2ph1_A Nucleotide-binding prot 32.6 49 0.0017 27.9 4.7 40 12-51 18-59 (262)
317 3nrc_A Enoyl-[acyl-carrier-pro 32.5 1.1E+02 0.0039 25.8 7.1 42 12-54 26-67 (280)
318 3dfz_A SIRC, precorrin-2 dehyd 32.5 1.8E+02 0.0062 23.9 7.9 92 279-374 86-185 (223)
319 3ecs_A Translation initiation 32.4 1.5E+02 0.0051 26.0 7.7 19 114-132 214-232 (315)
320 1wrd_A TOM1, target of MYB pro 32.4 72 0.0025 22.7 4.7 52 342-397 2-56 (103)
321 3gem_A Short chain dehydrogena 32.4 41 0.0014 28.4 4.1 35 12-49 27-61 (260)
322 3vps_A TUNA, NAD-dependent epi 32.3 57 0.002 28.1 5.2 34 11-48 7-40 (321)
323 3rot_A ABC sugar transporter, 32.2 2.3E+02 0.0078 23.8 10.4 40 9-48 1-42 (297)
324 3g79_A NDP-N-acetyl-D-galactos 32.2 53 0.0018 30.9 5.1 36 9-49 16-53 (478)
325 3li6_A Calcium-binding protein 32.1 87 0.003 19.0 4.9 54 337-395 11-64 (66)
326 2zki_A 199AA long hypothetical 32.1 48 0.0016 26.4 4.3 37 11-48 4-41 (199)
327 1cyd_A Carbonyl reductase; sho 31.9 83 0.0028 25.8 6.0 37 8-48 4-40 (244)
328 2uyy_A N-PAC protein; long-cha 31.9 39 0.0013 29.5 4.0 32 11-47 30-61 (316)
329 3f67_A Putative dienelactone h 31.8 55 0.0019 26.4 4.8 36 12-47 32-67 (241)
330 3rp8_A Flavoprotein monooxygen 31.7 37 0.0013 30.8 4.0 35 8-47 20-54 (407)
331 1fmc_A 7 alpha-hydroxysteroid 31.6 73 0.0025 26.3 5.6 42 3-48 3-44 (255)
332 2rk3_A Protein DJ-1; parkinson 31.6 99 0.0034 24.6 6.2 38 11-49 3-40 (197)
333 2izz_A Pyrroline-5-carboxylate 31.6 41 0.0014 29.5 4.1 36 9-49 20-59 (322)
334 4e5v_A Putative THUA-like prot 31.4 49 0.0017 28.6 4.4 38 10-48 3-43 (281)
335 1vpd_A Tartronate semialdehyde 31.4 52 0.0018 28.3 4.7 31 12-47 6-36 (299)
336 2b4q_A Rhamnolipids biosynthes 31.3 69 0.0024 27.2 5.5 32 13-47 30-61 (276)
337 3dhn_A NAD-dependent epimerase 31.2 43 0.0015 27.2 4.0 33 12-48 5-37 (227)
338 3hh1_A Tetrapyrrole methylase 31.2 35 0.0012 24.8 3.0 18 29-46 69-86 (117)
339 3hyw_A Sulfide-quinone reducta 31.2 33 0.0011 31.5 3.6 36 9-50 1-38 (430)
340 2bln_A Protein YFBG; transfera 31.0 1.3E+02 0.0045 26.2 7.2 95 12-134 1-108 (305)
341 3sty_A Methylketone synthase 1 31.0 44 0.0015 27.5 4.1 37 13-49 13-49 (267)
342 1vl8_A Gluconate 5-dehydrogena 31.0 63 0.0022 27.3 5.1 34 12-48 21-54 (267)
343 2lpm_A Two-component response 31.0 22 0.00075 26.3 1.8 28 103-130 54-86 (123)
344 3ic5_A Putative saccharopine d 30.8 36 0.0012 24.1 3.1 95 12-134 6-104 (118)
345 3eme_A Rhodanese-like domain p 30.8 91 0.0031 21.6 5.2 34 10-47 55-88 (103)
346 3pfn_A NAD kinase; structural 30.8 34 0.0011 30.9 3.3 58 279-358 103-164 (365)
347 1sy7_A Catalase 1; heme oxidat 30.7 92 0.0031 30.9 6.7 42 7-49 530-571 (715)
348 3dff_A Teicoplanin pseudoaglyc 30.7 59 0.002 27.8 4.8 38 10-48 6-44 (273)
349 1vhq_A Enhancing lycopene bios 30.6 1E+02 0.0035 25.4 6.3 38 11-49 6-48 (232)
350 3dqp_A Oxidoreductase YLBE; al 30.4 35 0.0012 27.7 3.2 33 12-48 1-33 (219)
351 3ea0_A ATPase, para family; al 30.4 40 0.0014 27.9 3.7 40 11-50 3-45 (245)
352 2woj_A ATPase GET3; tail-ancho 30.4 44 0.0015 29.9 4.1 39 12-50 18-59 (354)
353 2w84_A Peroxisomal membrane pr 30.3 58 0.002 21.3 3.5 47 344-393 13-59 (70)
354 1qyc_A Phenylcoumaran benzylic 30.3 50 0.0017 28.4 4.4 34 11-48 4-37 (308)
355 3oid_A Enoyl-[acyl-carrier-pro 30.3 63 0.0021 27.1 4.9 36 9-47 1-36 (258)
356 3rfo_A Methionyl-tRNA formyltr 30.2 59 0.002 28.6 4.8 97 10-134 3-115 (317)
357 1u94_A RECA protein, recombina 30.2 1.6E+02 0.0053 26.3 7.7 42 11-52 63-104 (356)
358 2i2c_A Probable inorganic poly 30.1 21 0.00072 30.7 1.8 52 287-358 36-93 (272)
359 1xx6_A Thymidine kinase; NESG, 30.0 76 0.0026 25.4 5.1 40 9-48 5-45 (191)
360 1byi_A Dethiobiotin synthase; 29.9 52 0.0018 26.7 4.3 33 14-46 4-37 (224)
361 3io3_A DEHA2D07832P; chaperone 29.7 51 0.0018 29.4 4.4 40 11-50 17-59 (348)
362 3iwa_A FAD-dependent pyridine 29.7 38 0.0013 31.6 3.7 37 9-50 1-39 (472)
363 3tqr_A Phosphoribosylglycinami 29.7 2.3E+02 0.0079 23.1 8.2 104 10-133 4-115 (215)
364 4edh_A DTMP kinase, thymidylat 29.7 68 0.0023 26.2 4.9 42 8-49 3-44 (213)
365 2nwq_A Probable short-chain de 29.6 54 0.0019 27.9 4.4 37 7-48 18-54 (272)
366 2dwc_A PH0318, 433AA long hypo 29.6 74 0.0025 29.1 5.7 35 11-50 19-53 (433)
367 1ihu_A Arsenical pump-driving 29.6 60 0.0021 31.3 5.2 39 11-49 7-46 (589)
368 2xdo_A TETX2 protein; tetracyc 29.6 40 0.0014 30.5 3.8 33 10-47 25-57 (398)
369 1mv8_A GMD, GDP-mannose 6-dehy 29.5 55 0.0019 30.2 4.7 31 12-47 1-31 (436)
370 2afh_E Nitrogenase iron protei 29.5 50 0.0017 28.3 4.2 37 13-49 4-40 (289)
371 3d64_A Adenosylhomocysteinase; 29.4 3.2E+02 0.011 25.7 9.9 84 9-111 73-162 (494)
372 3g17_A Similar to 2-dehydropan 29.3 17 0.00058 31.6 1.1 33 11-48 2-34 (294)
373 4da9_A Short-chain dehydrogena 29.3 69 0.0024 27.3 5.1 33 12-47 29-61 (280)
374 3cg4_A Response regulator rece 29.2 1.1E+02 0.0037 22.2 5.7 37 7-47 3-39 (142)
375 2q3e_A UDP-glucose 6-dehydroge 29.2 50 0.0017 30.9 4.4 34 9-47 2-38 (467)
376 3r5x_A D-alanine--D-alanine li 29.1 30 0.001 30.0 2.7 45 11-55 3-51 (307)
377 3tl4_X Glutaminyl-tRNA synthet 28.9 13 0.00044 30.0 0.2 25 326-358 108-132 (187)
378 2gf2_A Hibadh, 3-hydroxyisobut 28.8 42 0.0015 28.8 3.7 31 12-47 1-31 (296)
379 1pzg_A LDH, lactate dehydrogen 28.7 32 0.0011 30.5 2.9 34 11-49 9-43 (331)
380 3sc4_A Short chain dehydrogena 28.7 66 0.0022 27.5 4.9 34 12-48 9-42 (285)
381 3n0v_A Formyltetrahydrofolate 28.7 1.9E+02 0.0064 24.9 7.7 109 4-132 83-197 (286)
382 4id9_A Short-chain dehydrogena 28.7 60 0.0021 28.5 4.7 35 10-48 18-52 (347)
383 2fb6_A Conserved hypothetical 28.7 76 0.0026 23.1 4.4 43 11-53 7-53 (117)
384 2q7d_A Inositol-tetrakisphosph 28.7 29 0.001 31.0 2.6 46 3-48 10-55 (346)
385 3orf_A Dihydropteridine reduct 28.6 65 0.0022 26.8 4.8 34 12-48 22-55 (251)
386 2an1_A Putative kinase; struct 28.6 28 0.00097 30.1 2.5 27 285-313 64-94 (292)
387 3io5_A Recombination and repai 28.5 1.8E+02 0.0061 25.7 7.5 40 13-52 30-71 (333)
388 3mjf_A Phosphoribosylamine--gl 28.5 94 0.0032 28.6 6.1 87 12-127 4-95 (431)
389 3end_A Light-independent proto 28.5 60 0.0021 28.1 4.6 39 11-49 40-79 (307)
390 2zr9_A Protein RECA, recombina 28.4 2.6E+02 0.009 24.7 8.9 87 11-113 61-150 (349)
391 1efv_A Electron transfer flavo 28.4 89 0.003 27.4 5.6 108 12-132 2-119 (315)
392 2pd6_A Estradiol 17-beta-dehyd 28.3 1E+02 0.0035 25.6 6.1 37 8-48 4-40 (264)
393 3k3p_A D-alanine--D-alanine li 28.2 31 0.0011 31.4 2.7 43 6-48 32-78 (383)
394 2yvu_A Probable adenylyl-sulfa 28.1 77 0.0026 24.8 4.9 40 9-48 11-50 (186)
395 1zi8_A Carboxymethylenebutenol 28.1 71 0.0024 25.6 4.8 37 12-48 28-64 (236)
396 3d4o_A Dipicolinate synthase s 28.1 87 0.003 26.9 5.6 34 9-47 3-36 (293)
397 3ruf_A WBGU; rossmann fold, UD 28.0 75 0.0026 27.9 5.3 35 9-47 23-57 (351)
398 4ezb_A Uncharacterized conserv 28.0 44 0.0015 29.3 3.6 33 11-48 24-57 (317)
399 3op4_A 3-oxoacyl-[acyl-carrier 27.9 89 0.003 25.9 5.5 34 12-48 9-42 (248)
400 3k9g_A PF-32 protein; ssgcid, 27.9 55 0.0019 27.6 4.2 40 11-51 26-67 (267)
401 2x4g_A Nucleoside-diphosphate- 27.9 91 0.0031 27.1 5.8 34 11-48 13-46 (342)
402 1rpn_A GDP-mannose 4,6-dehydra 27.9 82 0.0028 27.3 5.5 40 4-48 8-47 (335)
403 1xfi_A Unknown protein; struct 27.8 62 0.0021 29.2 4.6 36 12-47 213-249 (367)
404 3kkj_A Amine oxidase, flavin-c 27.8 34 0.0012 28.3 2.8 28 14-46 5-32 (336)
405 2rh8_A Anthocyanidin reductase 27.7 87 0.003 27.2 5.6 40 1-46 1-40 (338)
406 1eiw_A Hypothetical protein MT 27.6 69 0.0024 23.2 4.0 93 248-357 6-109 (111)
407 3dfi_A Pseudoaglycone deacetyl 27.6 79 0.0027 27.0 5.1 39 10-49 6-45 (270)
408 1m5w_A Pyridoxal phosphate bio 27.4 2.4E+02 0.0082 23.5 7.6 43 10-52 87-140 (243)
409 3guy_A Short-chain dehydrogena 27.4 54 0.0018 26.9 3.9 34 12-48 1-34 (230)
410 1ff9_A Saccharopine reductase; 27.3 55 0.0019 30.5 4.3 34 9-47 1-34 (450)
411 3ax6_A Phosphoribosylaminoimid 27.2 92 0.0031 27.9 5.8 33 12-49 2-34 (380)
412 3osu_A 3-oxoacyl-[acyl-carrier 27.2 87 0.003 25.9 5.3 33 12-47 4-36 (246)
413 3kd9_A Coenzyme A disulfide re 27.1 44 0.0015 30.9 3.6 36 9-49 1-38 (449)
414 2gdz_A NAD+-dependent 15-hydro 27.1 79 0.0027 26.5 5.1 33 13-48 8-40 (267)
415 2ae2_A Protein (tropinone redu 27.0 87 0.003 26.2 5.3 36 9-48 7-42 (260)
416 1xgk_A Nitrogen metabolite rep 27.0 61 0.0021 28.8 4.4 36 9-48 3-38 (352)
417 3v2h_A D-beta-hydroxybutyrate 27.0 72 0.0025 27.2 4.8 33 12-47 25-57 (281)
418 1x0v_A GPD-C, GPDH-C, glycerol 27.0 20 0.00068 32.0 1.2 37 8-49 5-48 (354)
419 2y0c_A BCEC, UDP-glucose dehyd 26.9 50 0.0017 31.0 4.0 32 11-47 8-39 (478)
420 4h15_A Short chain alcohol deh 26.8 1E+02 0.0034 26.1 5.6 34 11-47 10-43 (261)
421 3f9i_A 3-oxoacyl-[acyl-carrier 26.8 93 0.0032 25.7 5.4 35 11-48 13-47 (249)
422 1u0t_A Inorganic polyphosphate 26.8 26 0.00088 30.7 1.8 30 283-314 74-107 (307)
423 2xw6_A MGS, methylglyoxal synt 26.7 79 0.0027 23.8 4.2 93 12-128 4-110 (134)
424 4dqx_A Probable oxidoreductase 26.6 85 0.0029 26.7 5.2 34 12-48 27-60 (277)
425 1sby_A Alcohol dehydrogenase; 26.6 1.5E+02 0.005 24.5 6.7 36 9-48 3-39 (254)
426 1ydg_A Trp repressor binding p 26.1 95 0.0032 24.9 5.2 37 11-47 6-43 (211)
427 3uf0_A Short-chain dehydrogena 26.1 1.3E+02 0.0046 25.3 6.4 34 12-48 31-64 (273)
428 1fjh_A 3alpha-hydroxysteroid d 26.0 77 0.0026 26.3 4.8 32 13-47 2-33 (257)
429 2f1k_A Prephenate dehydrogenas 25.9 57 0.0019 27.7 3.9 31 12-47 1-31 (279)
430 2ab0_A YAJL; DJ-1/THIJ superfa 25.9 1.4E+02 0.0047 24.0 6.1 37 12-49 3-39 (205)
431 4iin_A 3-ketoacyl-acyl carrier 25.8 95 0.0033 26.1 5.4 33 12-47 29-61 (271)
432 3f5d_A Protein YDEA; unknow pr 25.8 51 0.0018 26.8 3.4 39 11-50 3-42 (206)
433 1o5i_A 3-oxoacyl-(acyl carrier 25.8 1.2E+02 0.0041 25.1 5.9 39 6-48 14-52 (249)
434 3twe_A Alpha4H; unknown functi 25.8 43 0.0015 16.5 1.7 13 385-397 9-21 (27)
435 3l7i_A Teichoic acid biosynthe 25.7 38 0.0013 33.7 3.1 107 277-394 608-719 (729)
436 3k30_A Histamine dehydrogenase 25.6 47 0.0016 32.8 3.7 34 10-48 390-423 (690)
437 2z04_A Phosphoribosylaminoimid 25.5 73 0.0025 28.3 4.7 34 12-50 2-35 (365)
438 3i42_A Response regulator rece 25.4 96 0.0033 21.9 4.7 35 9-47 1-35 (127)
439 3rkr_A Short chain oxidoreduct 25.3 95 0.0032 26.0 5.2 34 12-48 29-62 (262)
440 3cx3_A Lipoprotein; zinc-bindi 25.2 98 0.0033 26.6 5.3 77 40-130 177-256 (284)
441 1imj_A CIB, CCG1-interacting f 25.2 1.2E+02 0.0042 23.5 5.7 38 12-49 32-71 (210)
442 3ggo_A Prephenate dehydrogenas 25.2 67 0.0023 28.1 4.3 33 11-48 33-67 (314)
443 1kht_A Adenylate kinase; phosp 25.2 77 0.0026 24.7 4.4 41 9-49 1-41 (192)
444 3itj_A Thioredoxin reductase 1 25.1 33 0.0011 29.9 2.2 33 11-48 22-54 (338)
445 3kcn_A Adenylate cyclase homol 25.1 1.5E+02 0.005 21.8 5.9 50 305-361 75-126 (151)
446 3dkr_A Esterase D; alpha beta 25.1 60 0.0021 26.1 3.8 38 11-48 21-58 (251)
447 3ka7_A Oxidoreductase; structu 25.0 50 0.0017 30.0 3.6 31 12-47 1-31 (425)
448 2ehd_A Oxidoreductase, oxidore 25.0 59 0.002 26.6 3.8 33 13-48 6-38 (234)
449 3ll8_B Calcineurin subunit B t 25.0 83 0.0028 23.2 4.4 61 336-396 85-145 (155)
450 3ics_A Coenzyme A-disulfide re 24.9 50 0.0017 31.8 3.7 40 5-49 30-71 (588)
451 3pg5_A Uncharacterized protein 24.8 62 0.0021 28.9 4.1 39 12-50 1-41 (361)
452 2wtm_A EST1E; hydrolase; 1.60A 24.7 88 0.003 25.6 4.8 36 13-48 28-65 (251)
453 2pju_A Propionate catabolism o 24.7 59 0.002 27.0 3.6 29 100-131 151-180 (225)
454 3f2v_A General stress protein 24.7 45 0.0015 26.9 2.8 35 12-46 2-37 (192)
455 3grp_A 3-oxoacyl-(acyl carrier 24.7 1.1E+02 0.0036 25.9 5.4 34 12-48 27-60 (266)
456 3d1l_A Putative NADP oxidoredu 24.7 33 0.0011 29.0 2.1 35 8-47 7-42 (266)
457 1w2w_B 5-methylthioribose-1-ph 24.6 1.3E+02 0.0043 24.2 5.4 72 31-133 22-95 (191)
458 3tri_A Pyrroline-5-carboxylate 24.6 56 0.0019 28.0 3.6 35 9-48 1-38 (280)
459 2hy5_B Intracellular sulfur ox 24.5 60 0.002 24.4 3.3 42 13-54 7-51 (136)
460 3la6_A Tyrosine-protein kinase 24.5 64 0.0022 27.8 3.9 40 11-50 91-132 (286)
461 2cob_A LCOR protein; MLR2, KIA 24.5 80 0.0027 20.7 3.3 27 341-367 12-39 (70)
462 3pfb_A Cinnamoyl esterase; alp 24.5 86 0.0029 25.7 4.8 38 12-49 46-85 (270)
463 2ewd_A Lactate dehydrogenase,; 24.5 41 0.0014 29.5 2.7 33 11-48 4-37 (317)
464 2cvz_A Dehydrogenase, 3-hydrox 24.4 50 0.0017 28.1 3.3 30 12-47 2-31 (289)
465 4fbl_A LIPS lipolytic enzyme; 24.4 46 0.0016 28.2 3.0 34 15-48 54-87 (281)
466 3lou_A Formyltetrahydrofolate 24.2 3.2E+02 0.011 23.5 8.3 109 4-132 88-202 (292)
467 1e6u_A GDP-fucose synthetase; 24.2 61 0.0021 28.0 3.9 34 9-46 1-34 (321)
468 3slg_A PBGP3 protein; structur 24.1 89 0.003 27.7 5.0 37 8-48 21-58 (372)
469 3r6d_A NAD-dependent epimerase 24.0 97 0.0033 24.9 4.9 21 28-48 18-39 (221)
470 1rkx_A CDP-glucose-4,6-dehydra 24.0 98 0.0033 27.2 5.3 36 8-47 6-41 (357)
471 4a9w_A Monooxygenase; baeyer-v 24.0 37 0.0012 29.8 2.4 35 9-48 1-35 (357)
472 2gt1_A Lipopolysaccharide hept 24.0 39 0.0013 29.6 2.5 72 279-358 248-322 (326)
473 3i7m_A XAA-Pro dipeptidase; st 24.0 50 0.0017 24.6 2.8 34 23-56 1-34 (140)
474 3dii_A Short-chain dehydrogena 24.0 91 0.0031 25.8 4.8 34 12-48 2-35 (247)
475 3gk3_A Acetoacetyl-COA reducta 23.9 1.2E+02 0.0039 25.6 5.5 40 7-49 20-59 (269)
476 1sb8_A WBPP; epimerase, 4-epim 23.9 94 0.0032 27.3 5.1 35 9-47 25-59 (352)
477 1w6u_A 2,4-dienoyl-COA reducta 23.9 1.3E+02 0.0043 25.7 5.8 36 9-48 24-59 (302)
478 3tem_A Ribosyldihydronicotinam 23.8 1.1E+02 0.0038 25.2 5.2 36 12-47 2-40 (228)
479 4tmk_A Protein (thymidylate ki 23.8 1.2E+02 0.0042 24.7 5.4 41 9-49 1-42 (213)
480 3c1o_A Eugenol synthase; pheny 23.8 81 0.0028 27.2 4.6 34 12-49 5-38 (321)
481 3s55_A Putative short-chain de 23.8 96 0.0033 26.2 5.0 33 12-47 10-42 (281)
482 1gz6_A Estradiol 17 beta-dehyd 23.8 1E+02 0.0035 26.9 5.2 31 13-46 10-40 (319)
483 1n57_A Chaperone HSP31, protei 23.7 1.5E+02 0.005 25.6 6.1 38 12-49 49-99 (291)
484 3tsc_A Putative oxidoreductase 23.7 3.2E+02 0.011 22.8 9.0 33 12-47 11-43 (277)
485 2gas_A Isoflavone reductase; N 23.7 64 0.0022 27.6 3.9 34 12-49 3-36 (307)
486 3tfo_A Putative 3-oxoacyl-(acy 23.6 1.1E+02 0.0038 25.7 5.3 34 12-48 4-37 (264)
487 1zmt_A Haloalcohol dehalogenas 23.6 64 0.0022 26.9 3.7 33 12-47 1-33 (254)
488 3fkq_A NTRC-like two-domain pr 23.6 68 0.0023 28.8 4.1 39 10-48 141-181 (373)
489 3qiv_A Short-chain dehydrogena 23.5 1E+02 0.0036 25.4 5.1 34 12-48 9-42 (253)
490 1ccd_A Clara cell 17 KD protei 23.5 1.3E+02 0.0043 20.1 4.4 50 344-396 19-68 (77)
491 3icc_A Putative 3-oxoacyl-(acy 23.5 1.6E+02 0.0055 24.2 6.3 35 11-48 6-40 (255)
492 3nrn_A Uncharacterized protein 23.4 61 0.0021 29.5 3.8 31 12-47 1-31 (421)
493 4f0j_A Probable hydrolytic enz 23.4 72 0.0025 26.8 4.1 38 12-49 46-83 (315)
494 3dfz_A SIRC, precorrin-2 dehyd 23.3 1.1E+02 0.0037 25.3 4.9 37 9-50 29-65 (223)
495 3pxx_A Carveol dehydrogenase; 23.3 1.1E+02 0.0037 25.9 5.3 33 12-47 10-42 (287)
496 3nrb_A Formyltetrahydrofolate 23.3 3.5E+02 0.012 23.2 8.4 112 4-132 81-196 (287)
497 3fse_A Two-domain protein cont 23.2 1.5E+02 0.0052 26.6 6.2 45 2-49 3-47 (365)
498 3dme_A Conserved exported prot 23.2 53 0.0018 28.9 3.3 33 11-48 4-36 (369)
499 3afn_B Carbonyl reductase; alp 23.2 1.1E+02 0.0037 25.3 5.1 37 8-48 4-40 (258)
500 3m3p_A Glutamine amido transfe 23.1 82 0.0028 26.6 4.2 37 9-48 1-37 (250)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.2e-64 Score=481.35 Aligned_cols=372 Identities=26% Similarity=0.366 Sum_probs=303.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHG--IDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADERED 87 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
++.||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+... ...++++|+++|++++++.....+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCCCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCCCCCCCccccCC
Confidence 478999999999999999999999999999 99999999877665533210 113579999999999876533223
Q ss_pred H----HHHHhhc----hhhc------cCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhccC
Q 042709 88 P----HKLMTED----PQAD------TEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAII 152 (398)
Q Consensus 88 ~----~~~~~~~----~~~~------~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (398)
. ..+++.. .+.+ .+. +||||+|.+++|+..+|+++|||++.|++++++.++.+++++.+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 2 2222221 1111 245 99999999999999999999999999999999999998887654433100
Q ss_pred CCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccc----ccCCCc
Q 042709 153 DPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPA----CDLIPS 228 (398)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~----~~~~~~ 228 (398)
. .........++||++.+..++++. ++.. .....+.+++.+..+.+.+++.+++||+++||++. ++..|+
T Consensus 168 ~----~~~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~ 241 (454)
T 3hbf_A 168 K----EVHDVKSIDVLPGFPELKASDLPE-GVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKL 241 (454)
T ss_dssp H----HHTTSSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSC
T ss_pred C----ccccccccccCCCCCCcChhhCch-hhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCC
Confidence 0 001122344689999999999994 3332 33445667777777788999999999999999863 445678
Q ss_pred eecC--------------CcchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc-------------------------
Q 042709 229 VLPF--------------DSTCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL------------------------- 269 (398)
Q Consensus 229 ~~~v--------------~~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~------------------------- 269 (398)
+++| ++++.+||+.++++++|||||||....+.+++.+++.
T Consensus 242 v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~ 321 (454)
T 3hbf_A 242 LLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGF 321 (454)
T ss_dssp EEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTH
T ss_pred EEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhH
Confidence 8877 2358899999988999999999999888888887765
Q ss_pred -------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCC
Q 042709 270 -------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGI 342 (398)
Q Consensus 270 -------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 342 (398)
+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.++. +.
T Consensus 322 ~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~ 398 (454)
T 3hbf_A 322 LERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GV 398 (454)
T ss_dssp HHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GS
T ss_pred HhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---CC
Confidence 36779999999999999999999999999999999999999999999999999999886799999975 67
Q ss_pred cCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042709 343 ITRQEIQINVKALLKND---GIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIK 394 (398)
Q Consensus 343 ~~~~~l~~ai~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 394 (398)
+++++|.++|+++|+|+ +||+||++|++++++++.+||||.+++++|++++.
T Consensus 399 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 399 LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999999999999987 79999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.7e-58 Score=447.68 Aligned_cols=383 Identities=31% Similarity=0.568 Sum_probs=282.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCC---CCC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQA---DER 85 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 85 (398)
|+++||+++|+|+.||++|++.||++|++|||+|||++++.+...+.+..........++++|++++++++... ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 55789999999999999999999999999999999999998877664431000000014899999998777521 112
Q ss_pred CCHHHHHhhchhhc------------c---CC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhh
Q 042709 86 EDPHKLMTEDPQAD------------T---EC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDA 149 (398)
Q Consensus 86 ~~~~~~~~~~~~~~------------~---~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 149 (398)
.++..++..+.+.+ . +. ||+||+|.++.|+..+|+++|||++.+++++++....+.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 33333333221111 1 36 99999999999999999999999999999999887776655544333
Q ss_pred ccCCCCCccc-cc---cccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccc---
Q 042709 150 AIIDPNGFAV-LN---YGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPA--- 222 (398)
Q Consensus 150 ~~~~~~~~~~-~~---~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~--- 222 (398)
+..+...... .. ......+|+++.+...+++ .++........+.+.+.+..+...+++.+++||+++||++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 3332111000 00 1122245666656555655 23222222233444454555566789999999999999862
Q ss_pred -ccCCCceecC-----C---------------------cchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc------
Q 042709 223 -CDLIPSVLPF-----D---------------------STCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL------ 269 (398)
Q Consensus 223 -~~~~~~~~~v-----~---------------------~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~------ 269 (398)
++..+++++| . .++.+||+.++++++|||||||......+++.+++.
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 3334666666 1 124689999888899999999988767666665543
Q ss_pred ------------------------------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchh
Q 042709 270 ------------------------------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQH 319 (398)
Q Consensus 270 ------------------------------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~ 319 (398)
+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 25669999999999999999999999999999999999999999999999
Q ss_pred hHHHhhc-cceeeEEEecCCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 320 HNRNYIC-DVWKIGVQLLPDENGIITRQEIQINVKALLKND---GIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 320 ~na~~~~-~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
.||++++ + +|+|+.++ ..+++++|.++|+++|+|+ +||+||+++++.+++++.+||||..++++|++.++.
T Consensus 405 ~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 405 TDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999997 6 79999995 3589999999999999998 699999999999999999999999999999999865
Q ss_pred hh
Q 042709 396 LR 397 (398)
Q Consensus 396 ~~ 397 (398)
.+
T Consensus 480 ~~ 481 (482)
T 2pq6_A 480 KQ 481 (482)
T ss_dssp C-
T ss_pred cC
Confidence 43
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.6e-58 Score=442.28 Aligned_cols=380 Identities=25% Similarity=0.400 Sum_probs=283.6
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGID--VTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE 84 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
++++++||+++|+|+.||++|+++||+.|++|||+ |||++++.+...+.+.... ...++++|+++++++++....
T Consensus 3 ~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~---~~~~~i~~~~i~~glp~~~~~ 79 (456)
T 2c1x_A 3 QTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH---TMQCNIKSYDISDGVPEGYVF 79 (456)
T ss_dssp ----CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTTCCC
T ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc---cCCCceEEEeCCCCCCCcccc
Confidence 35567899999999999999999999999999755 6888887655544332100 012479999999888765311
Q ss_pred CCCHH----HHHhh----chhhc-----c-CC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhh
Q 042709 85 REDPH----KLMTE----DPQAD-----T-EC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDA 149 (398)
Q Consensus 85 ~~~~~----~~~~~----~~~~~-----~-~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 149 (398)
..+.. .+... +.+.+ + +. ||+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 80 AGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred cCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 11111 11111 11111 1 35 99999999999999999999999999999998877766554433222
Q ss_pred -ccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccc----cc
Q 042709 150 -AIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPA----CD 224 (398)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~----~~ 224 (398)
+..+.. . ........+|+++.+..++++. .+........+.+.+.+......+++.+++||++++|++. ++
T Consensus 160 ~~~~~~~--~-~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~ 235 (456)
T 2c1x_A 160 IGVSGIQ--G-REDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235 (456)
T ss_dssp HCSSCCT--T-CTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH
T ss_pred cCCcccc--c-ccccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHh
Confidence 111100 0 1122333578887777777773 2222222223344444445556789999999999999972 33
Q ss_pred CCCceecC-------C-------cchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc---------------------
Q 042709 225 LIPSVLPF-------D-------STCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL--------------------- 269 (398)
Q Consensus 225 ~~~~~~~v-------~-------~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~--------------------- 269 (398)
..|++++| . .++.+|++..+++++|||||||......+++.+++.
T Consensus 236 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l 315 (456)
T 2c1x_A 236 KLKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHL 315 (456)
T ss_dssp HSSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGS
T ss_pred cCCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhC
Confidence 45677777 1 236799999888899999999998777776666543
Q ss_pred -----------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCC
Q 042709 270 -----------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPD 338 (398)
Q Consensus 270 -----------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 338 (398)
+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.++.
T Consensus 316 ~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~- 394 (456)
T 2c1x_A 316 PEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG- 394 (456)
T ss_dssp CTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG-
T ss_pred CHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC-
Confidence 35669999999999999999999999999999999999999999999999999999985699999975
Q ss_pred CCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 042709 339 ENGIITRQEIQINVKALLKND---GIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVL 396 (398)
Q Consensus 339 ~~~~~~~~~l~~ai~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 396 (398)
+.+++++|.++|+++|+|+ +||+||+++++.+++++++||||..++++|++.+.+.
T Consensus 395 --~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 395 --GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp --GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred --CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 6799999999999999997 8999999999999999999999999999999998653
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.8e-56 Score=430.86 Aligned_cols=373 Identities=28% Similarity=0.460 Sum_probs=277.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCcc--chHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTEF--IHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADERE 86 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
+++||+++|+|+.||++|+++||++|++| ||+|||++++. +...+.+... ....+++|++++++..+......
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCCCCCCCCCch
Confidence 35899999999999999999999999998 99999999987 4455544210 11248999999865321111111
Q ss_pred CHHH-H---Hh----hchhhc----cCC-c-cEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhccC
Q 042709 87 DPHK-L---MT----EDPQAD----TEC-T-ACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAII 152 (398)
Q Consensus 87 ~~~~-~---~~----~~~~~~----~~~-p-D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (398)
+... + .. .+.+.+ ... + |+||+|.++.|+..+|+++|||++.+++++++....+.+++........
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 2221 1 11 111111 134 7 9999999999999999999999999999999888777766644332211
Q ss_pred CCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccc-------ccC
Q 042709 153 DPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPA-------CDL 225 (398)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~-------~~~ 225 (398)
+ +. + ......+|+++++...+++..+. ... ....+.+.+....+++++.+++|++.++|.+. .+.
T Consensus 161 ~---~~-~-~~~~~~~Pg~~p~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~ 232 (480)
T 2vch_A 161 E---FR-E-LTEPLMLPGCVPVAGKDFLDPAQ-DRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD 232 (480)
T ss_dssp C---GG-G-CSSCBCCTTCCCBCGGGSCGGGS-CTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT
T ss_pred c---cc-c-cCCcccCCCCCCCChHHCchhhh-cCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC
Confidence 1 00 0 01112456776666666663222 111 12344445555566788889999999999742 111
Q ss_pred CCceecC--------C-------cchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc----------------c----
Q 042709 226 IPSVLPF--------D-------STCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL----------------G---- 270 (398)
Q Consensus 226 ~~~~~~v--------~-------~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~----------------~---- 270 (398)
.+++++| + +++.+||+.++++++|||||||+.....+++.+++. .
T Consensus 233 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 233 KPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp CCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred CCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 3566666 1 246789999888899999999998877777776654 0
Q ss_pred ----------------------------cee-cccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhH
Q 042709 271 ----------------------------KIV-EWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHN 321 (398)
Q Consensus 271 ----------------------------~v~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~n 321 (398)
+++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 234 499999999999999999999999999999999999999999999999
Q ss_pred HHhh-ccceeeEEEecCCCCCCcCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 322 RNYI-CDVWKIGVQLLPDENGIITRQEIQINVKALLK---NDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 322 a~~~-~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
|+++ ++ +|+|+.++.++++.+++++|+++|+++|+ |++||+||++|++.+++++.+||+|..++++|++.+++
T Consensus 393 a~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 393 AVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9997 56 89999997633347999999999999998 67899999999999999999999999999999998874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.6e-55 Score=420.78 Aligned_cols=369 Identities=25% Similarity=0.443 Sum_probs=274.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccch-----HHHHHhhcccccCCCCCeEEEEcCCCC-CC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIH-----AKIIASMQGKAENSSSQIMLVSIPDGL-DL 80 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~ 80 (398)
++++||+++|+|+.||++|+++||+.|++| ||+|||++++.+. ..+.+.. ...++++|+++|++. +.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~~ 81 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPPP 81 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCCC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECCCCCCCc
Confidence 356899999999999999999999999999 9999999998763 2233211 122489999999763 32
Q ss_pred CCCCCCCHHH-HHh-------hchhhcc---CC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhh
Q 042709 81 QADEREDPHK-LMT-------EDPQADT---EC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLD 148 (398)
Q Consensus 81 ~~~~~~~~~~-~~~-------~~~~~~~---~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 148 (398)
.. ...+... +.. .+.+.++ +. ||+||+|.++.|+..+|+++|||++.+++++++....+.+++....
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 82 QE-LLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp GG-GGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred cc-ccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 11 0111110 111 1112222 36 9999999999999999999999999999999988777766553321
Q ss_pred hccCCCCCcccccccc---ccccCCC-CCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccccc
Q 042709 149 AAIIDPNGFAVLNYGL---ISLSNEI-PALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPACD 224 (398)
Q Consensus 149 ~~~~~~~~~~~~~~~~---~~~~~~l-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~ 224 (398)
.+.. . . ... ...+|++ +++..++++..+... ...++.+.+....+++++.+++||++++|++...
T Consensus 161 ~~~~-----~-~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~ 229 (463)
T 2acv_A 161 EEVF-----D-D-SDRDHQLLNIPGISNQVPSNVLPDACFNK----DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSID 229 (463)
T ss_dssp TCCC-----C-C-SSGGGCEECCTTCSSCEEGGGSCHHHHCT----TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHH
T ss_pred cCCC-----C-C-ccccCceeECCCCCCCCChHHCchhhcCC----chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHH
Confidence 1100 0 0 011 2256777 666655555212111 1134444455556678889999999999976322
Q ss_pred C-------CCceecC------C------------cchHHhhhcCCCCcEEEEEeCCcc-cCCHHHHHHhhc---------
Q 042709 225 L-------IPSVLPF------D------------STCLSWRDKQAIGSVTYVAFGRFS-ILGQEQLEQLAL--------- 269 (398)
Q Consensus 225 ~-------~~~~~~v------~------------~~~~~~l~~~~~~~vVyvs~Gs~~-~~~~~~~~~~~~--------- 269 (398)
. .+++++| . .++.+||+.++++++|||||||.. ..+.+++.+++.
T Consensus 230 ~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~ 309 (463)
T 2acv_A 230 ALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRF 309 (463)
T ss_dssp HHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcE
Confidence 1 4556555 1 135689999888899999999998 777666665543
Q ss_pred ------------------------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhh
Q 042709 270 ------------------------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYI 325 (398)
Q Consensus 270 ------------------------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~ 325 (398)
+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+++
T Consensus 310 l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 310 LWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp EEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred EEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 13446999999999999999999999999999999999999999999999999995
Q ss_pred -ccceeeEEEec-CCCCC--CcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 326 -CDVWKIGVQLL-PDENG--IITRQEIQINVKALLK-NDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 326 -~~~~g~g~~l~-~~~~~--~~~~~~l~~ai~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
++ +|+|+.+. ..+++ .+++++|.++|+++|+ +++||+||+++++.+++++.+||+|..++++|++++++
T Consensus 390 v~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 390 VKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 463 (463)
T ss_dssp HHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcC
Confidence 67 79999993 21124 7899999999999997 47899999999999999999999999999999999853
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3e-43 Score=336.70 Aligned_cols=348 Identities=18% Similarity=0.198 Sum_probs=236.7
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC---
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE--- 84 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 84 (398)
.|.+|||+|+++++.||++|+++||++|++|||+|+|++++.+.+.+.+. +++|++++..++.....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~ 78 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDSILPKESNPEES 78 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCCCSCCTTCTTCC
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCccccccccchhh
Confidence 35668999999999999999999999999999999999999998888776 68999988765433111
Q ss_pred -CCCHHHHH-----------hhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhcc
Q 042709 85 -REDPHKLM-----------TEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAI 151 (398)
Q Consensus 85 -~~~~~~~~-----------~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 151 (398)
..+...++ ..+.+.+++. ||+||+|.++.|+..+|+.+|||++.+++.+....... ..+.....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~~ 157 (424)
T 2iya_A 79 WPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDPT 157 (424)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCCC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-cccccccccc
Confidence 12222211 1222233566 99999999888999999999999999987764211110 0000000000
Q ss_pred CCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHH----------hhhccceEEeccccccccc
Q 042709 152 IDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQ----------AFKISKWVLNNSVYELDSP 221 (398)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~t~~~le~~ 221 (398)
.+ .+.+ ...+ ....... .+...........+.+.+... ....++.++.+++++++++
T Consensus 158 ~~-~~~~-------~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 158 AD-RGEE-------AAAP----AGTGDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp C----------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred cc-cccc-------cccc----cccccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 00 0000 0000 0000000 000000000111111111111 1125788999999999987
Q ss_pred cccCCCceecCC------cchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc--------------------------
Q 042709 222 ACDLIPSVLPFD------STCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL-------------------------- 269 (398)
Q Consensus 222 ~~~~~~~~~~v~------~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~-------------------------- 269 (398)
..++.+++.++. ++..+|++..+++++|||+|||......+.+.+++.
T Consensus 225 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~ 304 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVP 304 (424)
T ss_dssp GGGCCTTEEECCCCCCCCGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCC
T ss_pred ccCCCCCEEEeCCCCCCcccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCC
Confidence 555566776662 223468876666789999999997544554444332
Q ss_pred --cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHH
Q 042709 270 --GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQE 347 (398)
Q Consensus 270 --~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~ 347 (398)
+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+.++. ..+++++
T Consensus 305 ~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~ 378 (424)
T 2iya_A 305 PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEK 378 (424)
T ss_dssp TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHH
T ss_pred CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcCc---CCCCHHH
Confidence 345689999999999998 99999999999999999999999999999999999998 699999975 5689999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 042709 348 IQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSF 389 (398)
Q Consensus 348 l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 389 (398)
|.++|+++|+|++++++++++++.+++ .++..+.++.+
T Consensus 379 l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i 416 (424)
T 2iya_A 379 LREAVLAVASDPGVAERLAAVRQEIRE----AGGARAAADIL 416 (424)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHH
Confidence 999999999999999999999999886 34444444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.1e-43 Score=337.24 Aligned_cols=307 Identities=18% Similarity=0.203 Sum_probs=194.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCC-------
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQA------- 82 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 82 (398)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.+... . ++.+.++........
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~----------g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A----------GLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T----------TCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c----------CCeeEecCCchhHhhhcccccc
Confidence 3579999999999999999999999999999999999998876443 2 577777653321100
Q ss_pred C-------CCCCHHHHH-----------hhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhh
Q 042709 83 D-------EREDPHKLM-----------TEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHI 143 (398)
Q Consensus 83 ~-------~~~~~~~~~-----------~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 143 (398)
. .......+. ..+.+.+++. ||+||+|.++.++..+|+.+|||++.+...+..........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~ 169 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL 169 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH
Confidence 0 000111111 1111122455 99999999999999999999999999876654332222111
Q ss_pred hhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEeccccccccccc
Q 042709 144 PKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPAC 223 (398)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~ 223 (398)
......... ...++......... ..... ..... . .......+ .
T Consensus 170 ~~~~l~~~~--------------~~~~~~~~~~~~~~---~~~~~---~~~~~-------~---------~~~~~~~~-~ 212 (400)
T 4amg_A 170 IRRAMSKDY--------------ERHGVTGEPTGSVR---LTTTP---PSVEA-------L---------LPEDRRSP-G 212 (400)
T ss_dssp HHHHTHHHH--------------HHTTCCCCCSCEEE---EECCC---HHHHH-------T---------SCGGGCCT-T
T ss_pred HHHHHHHHH--------------HHhCCCcccccchh---hcccC---chhhc-------c---------CcccccCC-c
Confidence 000000000 00000000000000 00000 00000 0 00000000 0
Q ss_pred cCCCceecC--CcchHHhhhcCCCCcEEEEEeCCcccCC--HHHHHHhh----c-----------------------cce
Q 042709 224 DLIPSVLPF--DSTCLSWRDKQAIGSVTYVAFGRFSILG--QEQLEQLA----L-----------------------GKI 272 (398)
Q Consensus 224 ~~~~~~~~v--~~~~~~~l~~~~~~~vVyvs~Gs~~~~~--~~~~~~~~----~-----------------------~~v 272 (398)
..+.+..+. .....+|++..+++++|||||||+.... .+.+.+++ . +++
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~ 292 (400)
T 4amg_A 213 AWPMRYVPYNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRV 292 (400)
T ss_dssp CEECCCCCCCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEE
T ss_pred ccCcccccccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEE
Confidence 000000001 2345579988888999999999986532 12333322 2 567
Q ss_pred ecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHH
Q 042709 273 VEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINV 352 (398)
Q Consensus 273 ~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai 352 (398)
.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++ +|+|+.++. ..++++ +|
T Consensus 293 ~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~~----al 362 (400)
T 4amg_A 293 VEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEA---GSLGAE----QC 362 (400)
T ss_dssp ECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCT---TTCSHH----HH
T ss_pred EeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCC---CCchHH----HH
Confidence 799999999999998 99999999999999999999999999999999999999 699999975 555654 67
Q ss_pred HHHhcCHHHHHHHHHHHHHHHH
Q 042709 353 KALLKNDGIKGNSLKLKEIARK 374 (398)
Q Consensus 353 ~~~l~~~~~~~~a~~l~~~~~~ 374 (398)
+++|+|++||+||+++++.+++
T Consensus 363 ~~lL~d~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 363 RRLLDDAGLREAALRVRQEMSE 384 (400)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCHHHHHHHHHHHHHHHc
Confidence 7899999999999999999986
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.6e-39 Score=305.20 Aligned_cols=311 Identities=14% Similarity=0.084 Sum_probs=209.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCC-CCCC---
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQAD-ERED--- 87 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 87 (398)
|||+|+++++.||++|+++||++|++|||+|+|++++.+.+.+.+. +++|++++........ ....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~i~~~~~~~~~~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV----------GVPHVPVGPSARAPIQRAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEECCC-------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc----------CCeeeeCCCCHHHHhhcccccchH
Confidence 6999999999999999999999999999999999999987777665 6888888764321100 0111
Q ss_pred -HHHHHhh----chhhc-c-CC-ccEEEecC-cchh--HHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhccCCCCC
Q 042709 88 -PHKLMTE----DPQAD-T-EC-TACVIADI-SVGW--ALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAIIDPNG 156 (398)
Q Consensus 88 -~~~~~~~----~~~~~-~-~~-pD~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (398)
+..+... ..+.+ + .. ||+||+|. +..| +..+|+.+|||++.+++++.+.... .
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~----------------~ 134 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP----------------Y 134 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS----------------S
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc----------------c
Confidence 1111111 11111 2 56 99999998 5668 8999999999999998876432100 0
Q ss_pred ccccccccccccCCCCCCccCccCcCCCCCCc----hhhHHHHHH----HHHHHh------------hhccceEEecccc
Q 042709 157 FAVLNYGLISLSNEIPALNRNEYTWSFPTEPN----IQKIFFGST----CATVQA------------FKISKWVLNNSVY 216 (398)
Q Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~----~~~~~~~~~----~~~~~~------------~~~~~~~l~~t~~ 216 (398)
+| .. .. ++ .++.....+.. ......+.+ ...... .... .++.++++
T Consensus 135 ~p-~~-----~~-~~------~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (415)
T 1iir_A 135 YP-PP-----PL-GE------PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADP 200 (415)
T ss_dssp SC-CC-----C----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCT
T ss_pred cC-Cc-----cC-Cc------cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeCh
Confidence 00 00 00 00 00000000000 000000000 011100 1122 68999999
Q ss_pred cccc-ccccCCCceecC-----------CcchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc---------------
Q 042709 217 ELDS-PACDLIPSVLPF-----------DSTCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL--------------- 269 (398)
Q Consensus 217 ~le~-~~~~~~~~~~~v-----------~~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~--------------- 269 (398)
++++ + .+.. ++.++ +.++.+|++.. +++|||++||.. ...+.+..++.
T Consensus 201 ~l~~~~-~~~~-~~~~vG~~~~~~~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~ 275 (415)
T 1iir_A 201 VLAPLQ-PTDL-DAVQTGAWILPDERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGW 275 (415)
T ss_dssp TTSCCC-CCSS-CCEECCCCCCCCCCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTC
T ss_pred hhcCCC-cccC-CeEeeCCCccCcccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9988 4 2222 44333 34678898765 369999999986 33433333321
Q ss_pred -----------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCC
Q 042709 270 -----------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPD 338 (398)
Q Consensus 270 -----------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 338 (398)
+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++ +|+|+.++.
T Consensus 276 ~~~~~~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~- 351 (415)
T 1iir_A 276 ADLVLPDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDG- 351 (415)
T ss_dssp TTCCCSSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS-
T ss_pred CcccccCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCc-
Confidence 346699999999977777 99999999999999999999999999999999999988 699999975
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 042709 339 ENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARK 374 (398)
Q Consensus 339 ~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~ 374 (398)
..+++++|.++|+++ +|++|+++++++++.++.
T Consensus 352 --~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 352 --PIPTFDSLSAALATA-LTPETHARATAVAGTIRT 384 (415)
T ss_dssp --SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS
T ss_pred --CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh
Confidence 568999999999999 999999999999998764
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.5e-38 Score=303.23 Aligned_cols=331 Identities=13% Similarity=0.131 Sum_probs=233.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCC-----CC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQAD-----ER 85 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 85 (398)
+|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.+..++..++.... ..
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA----------GATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCSTTTCCHHHHHHSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc----------CCEEEeccccccccccchhhccc
Confidence 48999999999999999999999999999999999999999888776 6999998865443210 00
Q ss_pred CC---HH--------HHHhhchhhccCC-ccEEEec-CcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhccC
Q 042709 86 ED---PH--------KLMTEDPQADTEC-TACVIAD-ISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAII 152 (398)
Q Consensus 86 ~~---~~--------~~~~~~~~~~~~~-pD~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (398)
.. +. .....+.+.+++. ||+||+| ....++..+|+.+|||++.+.+......... ..+.+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~-~~~~~~~~--- 165 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYS-FSQDMVTL--- 165 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCC-HHHHHHHH---
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccc-cccccccc---
Confidence 10 00 1112223333666 9999999 7777899999999999999875543110000 00000000
Q ss_pred CCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHH----------hhhc-cceEEeccccccccc
Q 042709 153 DPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQ----------AFKI-SKWVLNNSVYELDSP 221 (398)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~l~~t~~~le~~ 221 (398)
.... .+ . ......+.+.+... .... .+..+..+.+.++++
T Consensus 166 --------------~~~~--------~p-~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 216 (415)
T 3rsc_A 166 --------------AGTI--------DP-L------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA 216 (415)
T ss_dssp --------------HTCC--------CG-G------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT
T ss_pred --------------cccC--------Ch-h------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC
Confidence 0000 00 0 00000011111000 1112 277888888888876
Q ss_pred cccCCCceecC------CcchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc--------------------------
Q 042709 222 ACDLIPSVLPF------DSTCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL-------------------------- 269 (398)
Q Consensus 222 ~~~~~~~~~~v------~~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~-------------------------- 269 (398)
......++.++ ..+..+|....+++++||+++||......+.+..++.
T Consensus 217 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~ 296 (415)
T 3rsc_A 217 GDTFDDRFVFVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLP 296 (415)
T ss_dssp GGGCCTTEEECCCCCCCCGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCC
T ss_pred cccCCCceEEeCCCCCCcccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCC
Confidence 44444455544 2234567665667789999999987655544444432
Q ss_pred --cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHH
Q 042709 270 --GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQE 347 (398)
Q Consensus 270 --~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~ 347 (398)
+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|...||+.||.++++ .|+|+.+.. ..+++++
T Consensus 297 ~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~ 370 (415)
T 3rsc_A 297 PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPG---EKADGDT 370 (415)
T ss_dssp TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTCEEECCG---GGCCHHH
T ss_pred CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCCEEEccc---CCCCHHH
Confidence 346689999999999888 99999999999999999999999999999999999999 599999976 5789999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042709 348 IQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIK 394 (398)
Q Consensus 348 l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 394 (398)
|.++|.++++|++++++++++++.+.+ +++..+.++.+.+.+.
T Consensus 371 l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 371 LLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhh
Confidence 999999999999999999999999887 5666666665555443
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.5e-38 Score=298.57 Aligned_cols=334 Identities=16% Similarity=0.167 Sum_probs=231.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCC----C
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQAD----E 84 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 84 (398)
|+++||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+.+. |+.+..++..++.... .
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~ 71 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA----------GAEVVLYKSEFDTFHVPEVVK 71 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT----------TCEEEECCCGGGTSSSSSSSC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc----------CCEEEeccccccccccccccc
Confidence 5447999999999999999999999999999999999999888888766 6899988754332211 1
Q ss_pred CCCHHHH------------HhhchhhccCC-ccEEEec-CcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhc
Q 042709 85 REDPHKL------------MTEDPQADTEC-TACVIAD-ISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAA 150 (398)
Q Consensus 85 ~~~~~~~------------~~~~~~~~~~~-pD~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
..+.... ...+.+.++.. ||+||+| ....++..+|+.+|||++.+.+......... ..+.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~-~~~~~~~~- 149 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYS-LFKELWKS- 149 (402)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBC-HHHHHHHH-
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccc-cccccccc-
Confidence 1122111 12222333666 9999999 7777999999999999999875443210000 00000000
Q ss_pred cCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHH----------hhhcc-ceEEeccccccc
Q 042709 151 IIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQ----------AFKIS-KWVLNNSVYELD 219 (398)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~l~~t~~~le 219 (398)
.... .+ . ........+.+... ..... +..+..+.++++
T Consensus 150 -----------------~~~~-------~~-~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 198 (402)
T 3ia7_A 150 -----------------NGQR-------HP-A------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ 198 (402)
T ss_dssp -----------------HTCC-------CG-G------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS
T ss_pred -----------------cccc-------Ch-h------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC
Confidence 0000 00 0 00000011111000 01122 677777888887
Q ss_pred cccccCCCceecC------CcchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc------------------------
Q 042709 220 SPACDLIPSVLPF------DSTCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL------------------------ 269 (398)
Q Consensus 220 ~~~~~~~~~~~~v------~~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~------------------------ 269 (398)
++......++.++ ..+..+|+...+++++||+++||......+.+..++.
T Consensus 199 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 278 (402)
T 3ia7_A 199 PFAETFDERFAFVGPTLTGRDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGP 278 (402)
T ss_dssp TTGGGCCTTEEECCCCCCC----CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCS
T ss_pred CccccCCCCeEEeCCCCCCcccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCC
Confidence 7643344455555 1234457665667789999999997766544444432
Q ss_pred ----cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccC-ccchhhHHHhhccceeeEEEecCCCCCCcC
Q 042709 270 ----GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPS-FADQHHNRNYICDVWKIGVQLLPDENGIIT 344 (398)
Q Consensus 270 ----~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~ 344 (398)
+.+.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.||.++++ .|+|+.+.. +.++
T Consensus 279 ~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~~~~---~~~~ 352 (402)
T 3ia7_A 279 LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSVLRP---DQLE 352 (402)
T ss_dssp CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEECCG---GGCS
T ss_pred CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEEccC---CCCC
Confidence 346689999999999988 9999999999999999999999999 9999999999999 599999976 5789
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 345 RQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 345 ~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
+++|.++|.++++|++++++++++++.+.+ +++..+.++.+.+.+.+
T Consensus 353 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 353 PASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHhh
Confidence 999999999999999999999999999876 55556666655555543
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.1e-39 Score=305.15 Aligned_cols=326 Identities=12% Similarity=0.008 Sum_probs=220.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCC--CCCC--
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQAD--ERED-- 87 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 87 (398)
|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++........ ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMMLQEGMPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHHhhccccchh
Confidence 6999999999999999999999999999999999999988877776 6888888754321100 0111
Q ss_pred --HHHHH----hhchhhcc--CC-ccEEEecC-cchh--HHHHHHHhCCceEEEcCCcHHHHHHHhhhhhhhhhccCCCC
Q 042709 88 --PHKLM----TEDPQADT--EC-TACVIADI-SVGW--ALEVAEAIGIARAAFVPFGPGSLALSLHIPKLLDAAIIDPN 155 (398)
Q Consensus 88 --~~~~~----~~~~~~~~--~~-pD~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (398)
...++ ..+.+.+. .. ||+||+|. ..++ +..+|+.+|||++.+++++.+...
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~----------------- 133 (416)
T 1rrv_A 71 EEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS----------------- 133 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------------
Confidence 11111 11112223 56 99999997 4456 899999999999998877643100
Q ss_pred CccccccccccccC-CCCCCccCccCcCCCCCCch----hhHH----HHHHHHHHH------------hhhccceEEecc
Q 042709 156 GFAVLNYGLISLSN-EIPALNRNEYTWSFPTEPNI----QKIF----FGSTCATVQ------------AFKISKWVLNNS 214 (398)
Q Consensus 156 ~~~~~~~~~~~~~~-~l~~~~~~~l~~~~~~~~~~----~~~~----~~~~~~~~~------------~~~~~~~~l~~t 214 (398)
..+| ..+ +. +......+... .... .+.+.+... ..... .+++++
T Consensus 134 ----------~~~p~~~~-~~---~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (416)
T 1rrv_A 134 ----------PHLPPAYD-EP---TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAA 198 (416)
T ss_dssp ----------SSSCCCBC-SC---CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECS
T ss_pred ----------cccCCCCC-CC---CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEcc
Confidence 0011 000 00 00000000000 0000 000111110 11222 689999
Q ss_pred ccccccccccCCCceecC-----------CcchHHhhhcCCCCcEEEEEeCCccc-CCHHHHHHhhc-------------
Q 042709 215 VYELDSPACDLIPSVLPF-----------DSTCLSWRDKQAIGSVTYVAFGRFSI-LGQEQLEQLAL------------- 269 (398)
Q Consensus 215 ~~~le~~~~~~~~~~~~v-----------~~~~~~~l~~~~~~~vVyvs~Gs~~~-~~~~~~~~~~~------------- 269 (398)
+++++++. +.. ++.++ +.++.+|++.. +++|||++||... ...+.+..++.
T Consensus 199 ~~~l~~~~-~~~-~~~~vG~~~~~~~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~ 274 (416)
T 1rrv_A 199 DPVLAPLQ-PDV-DAVQTGAWLLSDERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSR 274 (416)
T ss_dssp CTTTSCCC-SSC-CCEECCCCCCCCCCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CccccCCC-CCC-CeeeECCCccCccCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEe
Confidence 99998762 222 33333 34577898765 3699999999853 22233333221
Q ss_pred -------------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEec
Q 042709 270 -------------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLL 336 (398)
Q Consensus 270 -------------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 336 (398)
+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++ +|+|+.++
T Consensus 275 g~~~~~~~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~ 351 (416)
T 1rrv_A 275 GWTELVLPDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHD 351 (416)
T ss_dssp TTTTCCCSCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECS
T ss_pred CCccccccCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCC
Confidence 346699999999987777 99999999999999999999999999999999999998 69999987
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 337 PDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 337 ~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
. ..+++++|.++|+++ +|++|+++++++++.+++ .++. +.++.+++++.+
T Consensus 352 ~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 352 G---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLVLAAVGR 401 (416)
T ss_dssp S---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC
T ss_pred C---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHhc
Confidence 5 568999999999999 999999999999988875 3344 444444255443
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.2e-38 Score=303.27 Aligned_cols=329 Identities=16% Similarity=0.113 Sum_probs=218.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCC--------
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQA-------- 82 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 82 (398)
.|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++.......
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~----------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA----------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC----------CCceeecCCccchHHHhhhhhcc
Confidence 48999999999999999999999999999999999999988777665 688998875431000
Q ss_pred -------CC-----CC--CHH------H--------------HHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceE
Q 042709 83 -------DE-----RE--DPH------K--------------LMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARA 127 (398)
Q Consensus 83 -------~~-----~~--~~~------~--------------~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v 127 (398)
.. .. ... . .+..+.+.+++. ||+||+|..+.++..+|+.+|||++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 00 10 100 0 111111112445 9999999987899999999999999
Q ss_pred EEcCCcHHHHHHHhhhhhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhh--
Q 042709 128 AFVPFGPGSLALSLHIPKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFK-- 205 (398)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 205 (398)
.+...+.........+..... ..+.. . . . ....+.+.+....+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~----------~-~-~----~~~~~~l~~~~~~~g~~ 215 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGLLP------------------DQPEE----------H-R-E----DPLAEWLTWTLEKYGGP 215 (441)
T ss_dssp EECSSCCHHHHHHHHHHHHGG------------------GSCTT----------T-C-C----CHHHHHHHHHHHHTTCC
T ss_pred EEecCCCcchhhhhhhhhhcc------------------ccccc----------c-c-c----chHHHHHHHHHHHcCCC
Confidence 997655332111100000000 00000 0 0 0 001111111111111
Q ss_pred -------ccceEEeccccccccccccCC-CceecC----CcchHHhhhcCCCCcEEEEEeCCcccC---C----HHHHHH
Q 042709 206 -------ISKWVLNNSVYELDSPACDLI-PSVLPF----DSTCLSWRDKQAIGSVTYVAFGRFSIL---G----QEQLEQ 266 (398)
Q Consensus 206 -------~~~~~l~~t~~~le~~~~~~~-~~~~~v----~~~~~~~l~~~~~~~vVyvs~Gs~~~~---~----~~~~~~ 266 (398)
..+..+..+.+.++++ .+++ .++.++ +.++.+|++..+++++|||++||.... . ...++.
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~a 294 (441)
T 2yjn_A 216 AFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGA 294 (441)
T ss_dssp CCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCCCSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHH
T ss_pred CCCccccCCCeEEEecCccccCC-CCCCCCceeeeCCCCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHH
Confidence 2345566666666654 2221 122222 345678998766778999999998642 1 112222
Q ss_pred hhc-----------------------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHH
Q 042709 267 LAL-----------------------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRN 323 (398)
Q Consensus 267 ~~~-----------------------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 323 (398)
+.. +.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.
T Consensus 295 l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 372 (441)
T 2yjn_A 295 VGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQ 372 (441)
T ss_dssp HHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHH
T ss_pred HHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHH
Confidence 221 356699999999988888 9999999999999999999999999999999999
Q ss_pred hhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042709 324 YICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIK 394 (398)
Q Consensus 324 ~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 394 (398)
++++ .|+|+.++. ..+++++|.++|.++++|++++++++++++.+.+ .++..+.++.+.+.++
T Consensus 373 ~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 373 RTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHHHHHH
T ss_pred HHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHH
Confidence 9999 699999975 5789999999999999999999999999999876 4444444444433333
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=8.3e-38 Score=296.76 Aligned_cols=314 Identities=15% Similarity=0.101 Sum_probs=207.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCC----CCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQAD----ERED 87 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (398)
|||+|++.++.||++|++.||++|++|||+|+|++++.+.+.+++. ++.|.+++........ ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~----------g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV----------GVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT----------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCceeecCCCHHHHhccccCCHHH
Confidence 6899999999999999999999999999999999999998888876 6888888744321100 0011
Q ss_pred ----HHHHHhhchhhc--cCC-ccEEEecCcchhH---HHHHHHhCCceEEEcCCcHHHHHHHhhh-hhhhhhccCCCCC
Q 042709 88 ----PHKLMTEDPQAD--TEC-TACVIADISVGWA---LEVAEAIGIARAAFVPFGPGSLALSLHI-PKLLDAAIIDPNG 156 (398)
Q Consensus 88 ----~~~~~~~~~~~~--~~~-pD~vi~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 156 (398)
+...+....+.+ ... ||+||+|..+..+ ..+|+.+|||++.+..++........+. .......... .
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~--~ 148 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADR--L 148 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHH--H
Confidence 111111111111 114 9999999775543 7999999999998887765311100000 0000000000 0
Q ss_pred ccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEeccccccccccccCCCceecC----
Q 042709 157 FAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPACDLIPSVLPF---- 232 (398)
Q Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~v---- 232 (398)
+. ...+....--++++. .. ... ....+..+.++.+.+.+. .++.+++..+
T Consensus 149 ~~-~~~~~~~~~lgl~~~------------~~----~~~--------~~~~~~~l~~~~~~l~p~-~~~~~~~~~~G~~~ 202 (404)
T 3h4t_A 149 FG-DAVNSHRASIGLPPV------------EH----LYD--------YGYTDQPWLAADPVLSPL-RPTDLGTVQTGAWI 202 (404)
T ss_dssp HH-HHHHHHHHHTTCCCC------------CC----HHH--------HHHCSSCEECSCTTTSCC-CTTCCSCCBCCCCC
T ss_pred hH-HHHHHHHHHcCCCCC------------cc----hhh--------ccccCCeEEeeCcceeCC-CCCCCCeEEeCccc
Confidence 00 000000000000000 00 000 001233455666666554 3333444332
Q ss_pred -------CcchHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc--------------------------cceecccCcc
Q 042709 233 -------DSTCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL--------------------------GKIVEWAPQE 279 (398)
Q Consensus 233 -------~~~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~--------------------------~~v~~~vpq~ 279 (398)
++++.+|++.. +++|||+|||+.. ..+.+..++. +.+.+|+||.
T Consensus 203 ~~~~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~ 279 (404)
T 3h4t_A 203 LPDQRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQ 279 (404)
T ss_dssp CCCCCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHH
T ss_pred cCCCCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHH
Confidence 44567788743 5699999999975 3333333322 4567999999
Q ss_pred cccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCH
Q 042709 280 NDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKND 359 (398)
Q Consensus 280 ~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~ 359 (398)
++|+++++ ||||||+||+.||+++|+|+|++|+..||+.||.++++ .|+|+.++. ..+++++|.++|+++++ +
T Consensus 280 ~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~ 352 (404)
T 3h4t_A 280 VLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDG---PTPTVESLSAALATALT-P 352 (404)
T ss_dssp HHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS-H
T ss_pred HHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCc---CCCCHHHHHHHHHHHhC-H
Confidence 99998888 99999999999999999999999999999999999999 699999976 67899999999999999 9
Q ss_pred HHHHHHHHHHHHHH
Q 042709 360 GIKGNSLKLKEIAR 373 (398)
Q Consensus 360 ~~~~~a~~l~~~~~ 373 (398)
+|+++++++++.+.
T Consensus 353 ~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 353 GIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.1e-36 Score=287.50 Aligned_cols=307 Identities=14% Similarity=0.112 Sum_probs=218.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCC-C----------
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLD-L---------- 80 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~---------- 80 (398)
|||++++.++.||++|+++|+++|+++||+|+|++++.+.+.+.+. ++.++.++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV----------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC----------CCEEEEeCCcchHHHHhhhcccCc
Confidence 6999999999999999999999999999999999999877766655 688888765320 0
Q ss_pred CCCCCC-CHH-HH------------HhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhhhh
Q 042709 81 QADERE-DPH-KL------------MTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHIPK 145 (398)
Q Consensus 81 ~~~~~~-~~~-~~------------~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 145 (398)
...... ... .+ ...+.+.+++. ||+||+|....++..+|+.+|||++.+...+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~---------- 140 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD---------- 140 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC----------
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc----------
Confidence 000010 111 01 11122222555 999999988788999999999999987643210
Q ss_pred hhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhh-----hccceEEecccccccc
Q 042709 146 LLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAF-----KISKWVLNNSVYELDS 220 (398)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~t~~~le~ 220 (398)
..+ + .......+.+..... ..++.++.++.+.+++
T Consensus 141 ----------------------~~~--------~----------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 180 (384)
T 2p6p_A 141 ----------------------ADG--------I----------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRP 180 (384)
T ss_dssp ----------------------CTT--------T----------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSC
T ss_pred ----------------------cch--------h----------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCC
Confidence 000 0 000011111111111 1157788888888877
Q ss_pred ccccCC-CceecC----CcchHHhhhcCCCCcEEEEEeCCcccC-----CHHHHH----Hhhc-----------------
Q 042709 221 PACDLI-PSVLPF----DSTCLSWRDKQAIGSVTYVAFGRFSIL-----GQEQLE----QLAL----------------- 269 (398)
Q Consensus 221 ~~~~~~-~~~~~v----~~~~~~~l~~~~~~~vVyvs~Gs~~~~-----~~~~~~----~~~~----------------- 269 (398)
+ .+.. .++.++ +.++.+|++..+++++||+++||.... ..+.+. .+..
T Consensus 181 ~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l 259 (384)
T 2p6p_A 181 A-NAAPARMMRHVATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEAL 259 (384)
T ss_dssp T-TSCCCEECCCCCCCCCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHH
T ss_pred C-CCCCCCceEecCCCCCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhh
Confidence 5 2222 233333 245678988756667999999998753 122222 2221
Q ss_pred ------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCc
Q 042709 270 ------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGII 343 (398)
Q Consensus 270 ------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 343 (398)
+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.++++ .|+|+.++. ..+
T Consensus 260 ~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~---~~~ 332 (384)
T 2p6p_A 260 RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLP---GED 332 (384)
T ss_dssp HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TCC
T ss_pred CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCc---CCC
Confidence 456 89999999988888 99999999999999999999999999999999999998 699999875 568
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 042709 344 TRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFI 390 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 390 (398)
++++|.++|+++|+|++++++++++++.+++ .++..+.++.+.
T Consensus 333 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 375 (384)
T 2p6p_A 333 STEAIADSCQELQAKDTYARRAQDLSREISG----MPLPATVVTALE 375 (384)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHHH
Confidence 9999999999999999999999999999987 344444444433
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-36 Score=290.22 Aligned_cols=330 Identities=15% Similarity=0.166 Sum_probs=225.0
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC--
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE-- 84 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (398)
..|.+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.+. ++++++++...+.....
T Consensus 3 ~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~ 72 (430)
T 2iyf_A 3 TQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT----------GPRPVLYHSTLPGPDADPE 72 (430)
T ss_dssp -----CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------SCEEEECCCCSCCTTSCGG
T ss_pred CccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEEcCCcCcccccccc
Confidence 345568999999999999999999999999999999999999887666554 78899888654322110
Q ss_pred --CCCHHHH-----------HhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhhh-hhhhhh
Q 042709 85 --REDPHKL-----------MTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLHI-PKLLDA 149 (398)
Q Consensus 85 --~~~~~~~-----------~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~ 149 (398)
..++... ...+.+.+++. ||+||+|....++..+|+.+|||++.+++.+.......... .....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~- 151 (430)
T 2iyf_A 73 AWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR- 151 (430)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH-
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh-
Confidence 1122111 12222333666 99999998877899999999999999887653110000000 00000
Q ss_pred ccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHH----------hhhccceEEeccccccc
Q 042709 150 AIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQ----------AFKISKWVLNNSVYELD 219 (398)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~t~~~le 219 (398)
..... + ......+.+.+... ....++.+++++.+.++
T Consensus 152 -----------------~~~~~--------~--------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 198 (430)
T 2iyf_A 152 -----------------EPRQT--------E--------RGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQ 198 (430)
T ss_dssp -----------------HHHHS--------H--------HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGS
T ss_pred -----------------hhccc--------h--------HHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhC
Confidence 00000 0 00000000001000 11256889999999988
Q ss_pred cccccCCCc-eecCCc------chHHhhhcCCCCcEEEEEeCCcccCCHHHHHHhhc-----------------------
Q 042709 220 SPACDLIPS-VLPFDS------TCLSWRDKQAIGSVTYVAFGRFSILGQEQLEQLAL----------------------- 269 (398)
Q Consensus 220 ~~~~~~~~~-~~~v~~------~~~~~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~----------------------- 269 (398)
++..+..++ +.++.+ +..+|....+++++||+++||......+.+..++.
T Consensus 199 ~~~~~~~~~~v~~vG~~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l 278 (430)
T 2iyf_A 199 PHADRVDEDVYTFVGACQGDRAEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAEL 278 (430)
T ss_dssp TTGGGSCTTTEEECCCCC-----CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGG
T ss_pred CCcccCCCccEEEeCCcCCCCCCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHh
Confidence 764344556 665521 12357665556789999999987433333333221
Q ss_pred ------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCc
Q 042709 270 ------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGII 343 (398)
Q Consensus 270 ------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 343 (398)
+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|+.++++ .|+|+.++. +.+
T Consensus 279 ~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~ 352 (430)
T 2iyf_A 279 GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLAT---EEA 352 (430)
T ss_dssp CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCC---C-C
T ss_pred ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCC---CCC
Confidence 345689999999999998 99999999999999999999999999999999999998 699999975 568
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 042709 344 TRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFI 390 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 390 (398)
++++|.++|.++++|+++++++.++++.+.+. ++..+.++.+.
T Consensus 353 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 395 (430)
T 2iyf_A 353 TADLLRETALALVDDPEVARRLRRIQAEMAQE----GGTRRAADLIE 395 (430)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHHH
Confidence 99999999999999999999999999988763 44444444443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.1e-34 Score=274.92 Aligned_cols=313 Identities=14% Similarity=0.102 Sum_probs=198.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCC---------
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDL--------- 80 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 80 (398)
.+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.+. ++.+..++.....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA----------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT----------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC----------CCeeEecCCccchHhhhhhhcc
Confidence 469999999999999999999999999999999999999888888776 5777777531100
Q ss_pred CCC--CCCCHH---------------HHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHhh
Q 042709 81 QAD--EREDPH---------------KLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSLH 142 (398)
Q Consensus 81 ~~~--~~~~~~---------------~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 142 (398)
... ...+.. .....+.+.+++. ||+|++|....++..+|+.+|||++.+.............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~ 163 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA 163 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH
Confidence 000 000111 1111222222555 9999999887889999999999999877654221111000
Q ss_pred hhhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccccc
Q 042709 143 IPKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPA 222 (398)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~ 222 (398)
....... ... --+++. ....+..+..+.+.++.+.
T Consensus 164 ~~~~l~~-~~~--------------~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~ 198 (398)
T 4fzr_A 164 GVGELAP-ELA--------------ELGLTD------------------------------FPDPLLSIDVCPPSMEAQP 198 (398)
T ss_dssp HHHHTHH-HHH--------------TTTCSS------------------------------CCCCSEEEECSCGGGC---
T ss_pred HHHHHHH-HHH--------------HcCCCC------------------------------CCCCCeEEEeCChhhCCCC
Confidence 0000000 000 000000 0111233333333333321
Q ss_pred ccCCCceecC-----CcchHHhhhcCCCCcEEEEEeCCcccCC------------HHHHHHhhc----------------
Q 042709 223 CDLIPSVLPF-----DSTCLSWRDKQAIGSVTYVAFGRFSILG------------QEQLEQLAL---------------- 269 (398)
Q Consensus 223 ~~~~~~~~~v-----~~~~~~~l~~~~~~~vVyvs~Gs~~~~~------------~~~~~~~~~---------------- 269 (398)
.....++.++ ..+..+|+...+++++||+++||..... ...++.+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~ 278 (398)
T 4fzr_A 199 KPGTTKMRYVPYNGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQT 278 (398)
T ss_dssp -CCCEECCCCCCCCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----
T ss_pred CCCCCCeeeeCCCCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Confidence 0000001111 2345678776666789999999985321 112222221
Q ss_pred -------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCC
Q 042709 270 -------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGI 342 (398)
Q Consensus 270 -------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 342 (398)
+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.|+.++++ .|+|+.++. ..
T Consensus 279 l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~ 352 (398)
T 4fzr_A 279 LQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPW---EQ 352 (398)
T ss_dssp ---CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC------
T ss_pred hccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---cc
Confidence 456699999999999888 99999999999999999999999999999999999999 599999976 66
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 042709 343 ITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFD 387 (398)
Q Consensus 343 ~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 387 (398)
+++++|.++|.++|+|++++++++++++.+.+ ..+..+.++
T Consensus 353 ~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 393 (398)
T 4fzr_A 353 AGVESVLAACARIRDDSSYVGNARRLAAEMAT----LPTPADIVR 393 (398)
T ss_dssp ----CHHHHHHHHHHCTHHHHHHHHHHHHHTT----SCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc----CCCHHHHHH
Confidence 79999999999999999999999999998876 444444443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=6.8e-34 Score=269.57 Aligned_cols=308 Identities=14% Similarity=0.126 Sum_probs=206.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCC-----------
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLD----------- 79 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----------- 79 (398)
.|||+|++.++.||++|++.|+++|+++||+|+++++ .+.+.+... ++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA----------GLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT----------TCEEEESSTTCCHHHHHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC----------CCeeEecCCccCHHHHhhhcccC
Confidence 4899999999999999999999999999999999999 877777665 789999874311
Q ss_pred ----------CCCCCCCCHHHH--------HhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHH
Q 042709 80 ----------LQADEREDPHKL--------MTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALS 140 (398)
Q Consensus 80 ----------~~~~~~~~~~~~--------~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 140 (398)
............ ...+.+.+++. ||+||+|....++..+|+.+|||++.+...........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~ 168 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGMH 168 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTHH
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccchh
Confidence 000011111111 11222222555 99999998888899999999999998764432100000
Q ss_pred hhhhhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEecccccccc
Q 042709 141 LHIPKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDS 220 (398)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~ 220 (398)
.. .. .+ +.+...+........+..+..+.+.+..
T Consensus 169 ~~------------------------------------~~-~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T 3oti_A 169 RS------------------------------------IA-SF---------LTDLMDKHQVSLPEPVATIESFPPSLLL 202 (398)
T ss_dssp HH------------------------------------HH-TT---------CHHHHHHTTCCCCCCSEEECSSCGGGGT
T ss_pred hH------------------------------------HH-HH---------HHHHHHHcCCCCCCCCeEEEeCCHHHCC
Confidence 00 00 00 0000000000011224444444445443
Q ss_pred ccccCCCceecC----CcchHHhhhcCCCCcEEEEEeCCcccC--CHHHHHHhhc-------------------------
Q 042709 221 PACDLIPSVLPF----DSTCLSWRDKQAIGSVTYVAFGRFSIL--GQEQLEQLAL------------------------- 269 (398)
Q Consensus 221 ~~~~~~~~~~~v----~~~~~~~l~~~~~~~vVyvs~Gs~~~~--~~~~~~~~~~------------------------- 269 (398)
+......++.++ .....+|+...+++++||+++||.... ..+.+.+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~ 282 (398)
T 3oti_A 203 EAEPEGWFMRWVPYGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLP 282 (398)
T ss_dssp TSCCCSBCCCCCCCCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCC
T ss_pred CCCCCCCCccccCCCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCC
Confidence 310111111111 234456776666778999999998432 2222222221
Q ss_pred --cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHH--HhhccceeeEEEecCCCCCCcCH
Q 042709 270 --GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNR--NYICDVWKIGVQLLPDENGIITR 345 (398)
Q Consensus 270 --~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na--~~~~~~~g~g~~l~~~~~~~~~~ 345 (398)
+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|| .++++ .|+|+.++. ...+.
T Consensus 283 ~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~---~~~~~ 356 (398)
T 3oti_A 283 RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTS---DKVDA 356 (398)
T ss_dssp TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCG---GGCCH
T ss_pred CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCC---CCCCH
Confidence 456699999999999888 999999999999999999999999999999999 99999 699999976 56788
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 042709 346 QEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSF 389 (398)
Q Consensus 346 ~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 389 (398)
+.|. ++++|++++++++++++.+.+ ..+..+.++.+
T Consensus 357 ~~l~----~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l 392 (398)
T 3oti_A 357 DLLR----RLIGDESLRTAAREVREEMVA----LPTPAETVRRI 392 (398)
T ss_dssp HHHH----HHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHH
T ss_pred HHHH----HHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHH
Confidence 8776 889999999999999999886 44444444443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=7.6e-33 Score=261.72 Aligned_cols=313 Identities=13% Similarity=0.169 Sum_probs=211.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEc-CCCCCCCCC-----C
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSI-PDGLDLQAD-----E 84 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~ 84 (398)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+.+. ++.+..+ +........ .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA----------GLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB----------TCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC----------CCceeeecCCccchhhhhhhccc
Confidence 48999999999999999999999999999999999998887777766 6777777 321100000 0
Q ss_pred --------C--CCH----H----HH-------HhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHH
Q 042709 85 --------R--EDP----H----KL-------MTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLA 138 (398)
Q Consensus 85 --------~--~~~----~----~~-------~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 138 (398)
. ... . .+ ...+.+.+++. ||+|++|...+++..+|+.+|||++.+.........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~ 150 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG 150 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc
Confidence 0 000 0 11 22333333555 999999987778999999999999987654421100
Q ss_pred HHhhhhhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhh-----hccceEEec
Q 042709 139 LSLHIPKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAF-----KISKWVLNN 213 (398)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~ 213 (398)
. .......++.+..... ...+..+..
T Consensus 151 ~-------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (391)
T 3tsa_A 151 P-------------------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDP 181 (391)
T ss_dssp H-------------------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEEC
T ss_pred c-------------------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEe
Confidence 0 0000111111111111 112445555
Q ss_pred cccccccccccCCCceecC----CcchHHhhhcCCCCcEEEEEeCCccc--CC-HHHHHHhh------c-----------
Q 042709 214 SVYELDSPACDLIPSVLPF----DSTCLSWRDKQAIGSVTYVAFGRFSI--LG-QEQLEQLA------L----------- 269 (398)
Q Consensus 214 t~~~le~~~~~~~~~~~~v----~~~~~~~l~~~~~~~vVyvs~Gs~~~--~~-~~~~~~~~------~----------- 269 (398)
+.++++.+......++.++ +....+|+...+++++||+++||... .. .+.+..++ .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~ 261 (391)
T 3tsa_A 182 CPPSLQASDAPQGAPVQYVPYNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH 261 (391)
T ss_dssp SCGGGSCTTSCCCEECCCCCCCCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG
T ss_pred cChhhcCCCCCccCCeeeecCCCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc
Confidence 5555554421111111122 23445687766677899999999843 12 22222211 1
Q ss_pred ----------cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCC
Q 042709 270 ----------GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDE 339 (398)
Q Consensus 270 ----------~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 339 (398)
+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+.++++ .|+|+.++..
T Consensus 262 ~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~- 337 (391)
T 3tsa_A 262 RALLTDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDE- 337 (391)
T ss_dssp GGGCTTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSH-
T ss_pred hhhcccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCcc-
Confidence 346699999999988888 99999999999999999999999999999999999999 5999998520
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 042709 340 NGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFI 390 (398)
Q Consensus 340 ~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 390 (398)
....+++.|.++|.++++|++++++++++++.+.+ .++..+.++.+.
T Consensus 338 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 384 (391)
T 3tsa_A 338 QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALVRTLE 384 (391)
T ss_dssp HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 02378999999999999999999999999998876 455555444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=4.7e-31 Score=251.14 Aligned_cols=323 Identities=19% Similarity=0.172 Sum_probs=213.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCC-------------
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDG------------- 77 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~------------- 77 (398)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.+. ++.+..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL----------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc----------CCceeecCcccccchhhhhhhhh
Confidence 69999999999999999999999999999999999998876666665 6888888741
Q ss_pred ----CCCCC--CCCCCHHHHH---------hhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHHHHHh
Q 042709 78 ----LDLQA--DEREDPHKLM---------TEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSLALSL 141 (398)
Q Consensus 78 ----~~~~~--~~~~~~~~~~---------~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 141 (398)
.+... .......... ..+.+.+++. ||+|++|....++..+|+.+|||++.+............
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~ 169 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTR 169 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHHH
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhhH
Confidence 00000 0011111111 2233333555 999999987778889999999999987654331100000
Q ss_pred hhhhhhhhccCCCCCccccccccccccCCCCCCccCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEeccccccccc
Q 042709 142 HIPKLLDAAIIDPNGFAVLNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSP 221 (398)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~ 221 (398)
........ .. .--+++.. . .. ....++.++..+...++.+
T Consensus 170 ~~~~~~~~-~~--------------~~~g~~~~-----~-~~-------------------~~~~~d~~i~~~~~~~~~~ 209 (412)
T 3otg_A 170 SIEEEVRG-LA--------------QRLGLDLP-----P-GR-------------------IDGFGNPFIDIFPPSLQEP 209 (412)
T ss_dssp HHHHHHHH-HH--------------HHTTCCCC-----S-SC-------------------CGGGGCCEEECSCGGGSCH
T ss_pred HHHHHHHH-HH--------------HHcCCCCC-----c-cc-------------------ccCCCCeEEeeCCHHhcCC
Confidence 00000000 00 00000000 0 00 0123344444444444432
Q ss_pred cccCCC---ceecC----CcchHHh-hhcCCCCcEEEEEeCCcccCCHHHHHHhhc------------------------
Q 042709 222 ACDLIP---SVLPF----DSTCLSW-RDKQAIGSVTYVAFGRFSILGQEQLEQLAL------------------------ 269 (398)
Q Consensus 222 ~~~~~~---~~~~v----~~~~~~~-l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~------------------------ 269 (398)
...... ++.++ .....+| ....+++++|++++||......+.+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~ 289 (412)
T 3otg_A 210 EFRARPRRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGE 289 (412)
T ss_dssp HHHTCTTEEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCC
T ss_pred cccCCCCcceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhcc
Confidence 110000 01111 2234456 333455679999999986444444444332
Q ss_pred ----cceecccCcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCH
Q 042709 270 ----GKIVEWAPQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITR 345 (398)
Q Consensus 270 ----~~v~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~ 345 (398)
+.+.+|+|+..+|+++++ ||+|||+||++||+++|+|+|++|...||..|+..+++ .|+|+.++. +.+++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~ 363 (412)
T 3otg_A 290 VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISP 363 (412)
T ss_dssp CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCH
T ss_pred CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCH
Confidence 345688999999999998 99999999999999999999999999999999999999 599999976 56899
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 042709 346 QEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQI 393 (398)
Q Consensus 346 ~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 393 (398)
++|.++|.++++|+++++++.+.++.+.+ ..+..+.++.+.+.+
T Consensus 364 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 364 DSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHh
Confidence 99999999999999999999999988876 455555555444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.94 E-value=8.2e-27 Score=217.73 Aligned_cols=303 Identities=15% Similarity=0.112 Sum_probs=165.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchH--HHHHhhcccccCCCCCeEEEEcCC-CCCCCCC--C
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA--KIIASMQGKAENSSSQIMLVSIPD-GLDLQAD--E 84 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~ 84 (398)
=+.||++...++.||++|.++||++|.+|||+|+|++++...+ .+.+. +++++.++. +++.... .
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~----------g~~~~~i~~~~~~~~~~~~~ 70 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA----------GLPLHLIQVSGLRGKGLKSL 70 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG----------TCCEEECC------------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc----------CCcEEEEECCCcCCCCHHHH
Confidence 0468999999999999999999999999999999999876532 23333 688888873 2221110 1
Q ss_pred CCCHHHHHhhchh---hccCC-ccEEEecCcch--hHHHHHHHhCCceEEEcCCcHHH-HHHHhhhhhhhhhccCCCCCc
Q 042709 85 REDPHKLMTEDPQ---ADTEC-TACVIADISVG--WALEVAEAIGIARAAFVPFGPGS-LALSLHIPKLLDAAIIDPNGF 157 (398)
Q Consensus 85 ~~~~~~~~~~~~~---~~~~~-pD~vi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 157 (398)
-..+..+...+.. .+++. ||+||++..+. .+..+|+.+|||++..-...... ...... . ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~~G~~nr~l~--~-~a~~v------ 141 (365)
T 3s2u_A 71 VKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLA--P-IARRV------ 141 (365)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSSCCHHHHHHG--G-GCSEE------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchhhhhHHHhhc--c-cccee------
Confidence 1223333333322 23555 99999997654 45678899999999643211100 000000 0 00000
Q ss_pred cccccccccccCCCCCCc-cCccCcCCCCCCchhhHHHHHHHHHHHhhhccceEEeccccccccccccCCCceecC----
Q 042709 158 AVLNYGLISLSNEIPALN-RNEYTWSFPTEPNIQKIFFGSTCATVQAFKISKWVLNNSVYELDSPACDLIPSVLPF---- 232 (398)
Q Consensus 158 ~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~v---- 232 (398)
...++... ..+-. ......-.... . ..... ..+..+..+.+..+
T Consensus 142 ----------~~~~~~~~~~~~k~-~~~g~pvr~~~-~-----------------~~~~~--~~~~~~~~~~ilv~gGs~ 190 (365)
T 3s2u_A 142 ----------CEAFPDTFPASDKR-LTTGNPVRGEL-F-----------------LDAHA--RAPLTGRRVNLLVLGGSL 190 (365)
T ss_dssp ----------EESSTTSSCC---C-EECCCCCCGGG-C-----------------CCTTS--SCCCTTSCCEEEECCTTT
T ss_pred ----------eecccccccCcCcE-EEECCCCchhh-c-----------------cchhh--hcccCCCCcEEEEECCcC
Confidence 00000000 00000 00000000000 0 00000 00000000111111
Q ss_pred -----CcchHHhhhcCC--CCcEEEEEeCCcccCCHHHHHHhhc-----cceecccCcc-cccCCCCcceEEecCCcchH
Q 042709 233 -----DSTCLSWRDKQA--IGSVTYVAFGRFSILGQEQLEQLAL-----GKIVEWAPQE-NDLGHPSIAWFLSHCGWNST 299 (398)
Q Consensus 233 -----~~~~~~~l~~~~--~~~vVyvs~Gs~~~~~~~~~~~~~~-----~~v~~~vpq~-~lL~~~~~~~~ItHgG~~s~ 299 (398)
.+.+.+.+.... .+..|++.-|.. ..+...+... ..+.+|+++. .+|+.+++ +|||+|.+|+
T Consensus 191 g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~---~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv 265 (365)
T 3s2u_A 191 GAEPLNKLLPEALAQVPLEIRPAIRHQAGRQ---HAEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTV 265 (365)
T ss_dssp TCSHHHHHHHHHHHTSCTTTCCEEEEECCTT---THHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHH
T ss_pred CccccchhhHHHHHhcccccceEEEEecCcc---ccccccceecccccccccccchhhhhhhhccceE--EEecCCcchH
Confidence 111122222111 112333333321 2222222111 5567888875 68988888 9999999999
Q ss_pred HHHHhcCCceecccCc----cchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 042709 300 MEGLSMGVPFLCWPSF----ADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARK 374 (398)
Q Consensus 300 ~eal~~GvP~v~~P~~----~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~ 374 (398)
.|++++|+|+|.+|+. .+|..||+.+++ .|+|+.++. ..+++++|.++|.++++|++.+++ |++.+++
T Consensus 266 ~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~---m~~~a~~ 337 (365)
T 3s2u_A 266 SELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRS---MADQARS 337 (365)
T ss_dssp HHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHH---HHHHHHH
T ss_pred HHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHH---HHHHHHh
Confidence 9999999999999973 589999999999 599999975 678999999999999999865443 4444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.92 E-value=9.5e-25 Score=181.49 Aligned_cols=138 Identities=22% Similarity=0.385 Sum_probs=115.2
Q ss_pred CcchHHhhhcCCCCcEEEEEeCCccc-CCHHHHHHhhc------------------------cceecccCcccccCCCCc
Q 042709 233 DSTCLSWRDKQAIGSVTYVAFGRFSI-LGQEQLEQLAL------------------------GKIVEWAPQENDLGHPSI 287 (398)
Q Consensus 233 ~~~~~~~l~~~~~~~vVyvs~Gs~~~-~~~~~~~~~~~------------------------~~v~~~vpq~~lL~~~~~ 287 (398)
++++.+|++..+++++||+++||... ...+.+..++. +.+.+|+||..+|.|+.+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~a 87 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKT 87 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCc
Confidence 56888999877777899999999863 34444443332 456699999999977777
Q ss_pred ceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 042709 288 AWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLK 367 (398)
Q Consensus 288 ~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 367 (398)
++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. ..++.++|.++|.++++|++|++++++
T Consensus 88 d~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~a~~ 163 (170)
T 2o6l_A 88 RAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALKRVINDPSYKENVMK 163 (170)
T ss_dssp EEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 7799999999999999999999999999999999999999 699999975 678999999999999999999999999
Q ss_pred HHHHHHH
Q 042709 368 LKEIARK 374 (398)
Q Consensus 368 l~~~~~~ 374 (398)
+++.+++
T Consensus 164 ~~~~~~~ 170 (170)
T 2o6l_A 164 LSRIQHD 170 (170)
T ss_dssp HC-----
T ss_pred HHHHhhC
Confidence 9988763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.77 E-value=2.2e-17 Score=153.94 Aligned_cols=327 Identities=13% Similarity=0.032 Sum_probs=174.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch--HHHHHhhcccccCCCCCeEEEEcCCC-CCCCCC--CCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH--AKIIASMQGKAENSSSQIMLVSIPDG-LDLQAD--ERE 86 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~ 86 (398)
|||++++.+..||..+.+.|++.|.++||+|++++..... ..+.+. ++++..++.. +..... ...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH----------GIEIDFIRISGLRGKGIKALIA 76 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG----------TCEEEECCCCCCTTCCHHHHHT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc----------CCceEEecCCccCcCccHHHHH
Confidence 8999999888899999999999999999999999986532 222222 6777777532 211100 000
Q ss_pred CHHH---HHhhchhhccCC-ccEEEecCcc--hhHHHHHHHhCCceEEEcCCcHHH-HHHHhhhhhhhhhccCCCCCccc
Q 042709 87 DPHK---LMTEDPQADTEC-TACVIADISV--GWALEVAEAIGIARAAFVPFGPGS-LALSLHIPKLLDAAIIDPNGFAV 159 (398)
Q Consensus 87 ~~~~---~~~~~~~~~~~~-pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (398)
.... ....+.+.+++. ||+|+++... ..+..+++.+|+|++......... ...... . ..+.... .
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~--~-~~d~v~~----~- 148 (364)
T 1f0k_A 77 APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLA--K-IATKVMQ----A- 148 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHHHHT--T-TCSEEEE----S-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCCcHHHHHHH--H-hCCEEEe----c-
Confidence 1111 122233333555 9999999654 246678888999999654432100 000000 0 0000000 0
Q ss_pred cccccccccCCCCCCccCccCcCCCCCCchhhHHHHH-HHHHHHhhhccceEEeccccccccccccCCCceecCCcchHH
Q 042709 160 LNYGLISLSNEIPALNRNEYTWSFPTEPNIQKIFFGS-TCATVQAFKISKWVLNNSVYELDSPACDLIPSVLPFDSTCLS 238 (398)
Q Consensus 160 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~v~~~~~~ 238 (398)
... . ++. . ....+.-.. ..+.. ..+..........+++-..-.+... +. .+.+.+
T Consensus 149 ~~~----~---~~~--~-----~~i~n~v~~-~~~~~~~~~~~~~~~~~~~~il~~~g~~~~~------k~---~~~li~ 204 (364)
T 1f0k_A 149 FPG----A---FPN--A-----EVVGNPVRT-DVLALPLPQQRLAGREGPVRVLVVGGSQGAR------IL---NQTMPQ 204 (364)
T ss_dssp STT----S---SSS--C-----EECCCCCCH-HHHTSCCHHHHHTTCCSSEEEEEECTTTCCH------HH---HHHHHH
T ss_pred Chh----h---cCC--c-----eEeCCccch-hhcccchhhhhcccCCCCcEEEEEcCchHhH------HH---HHHHHH
Confidence 000 0 010 0 000010000 00000 0000000111111111110000000 00 011111
Q ss_pred hhhcCCCCcEEEEEeCCcccCCHHHHHHhhc------cceecccC-cccccCCCCcceEEecCCcchHHHHHhcCCceec
Q 042709 239 WRDKQAIGSVTYVAFGRFSILGQEQLEQLAL------GKIVEWAP-QENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLC 311 (398)
Q Consensus 239 ~l~~~~~~~vVyvs~Gs~~~~~~~~~~~~~~------~~v~~~vp-q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~ 311 (398)
-+....++-.+++-.|... .+.+.+.+. +.+.+|++ -..+++.+++ +|+++|.+++.||+.+|+|+|+
T Consensus 205 a~~~l~~~~~~l~i~G~~~---~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~ 279 (364)
T 1f0k_A 205 VAAKLGDSVTIWHQSGKGS---QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALF 279 (364)
T ss_dssp HHHHHGGGEEEEEECCTTC---HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCcEEEEEcCCch---HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEE
Confidence 1111111112234445432 233433322 55668874 4668888888 9999998999999999999999
Q ss_pred ccCc---cchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 042709 312 WPSF---ADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDS 388 (398)
Q Consensus 312 ~P~~---~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 388 (398)
.|.. .||..|+..+.+ .|.|..++. ..++.++|.++|.++ |++.+++..+-+.... +..+..+.++.
T Consensus 280 ~~~~g~~~~q~~~~~~~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 349 (364)
T 1f0k_A 280 VPFQHKDRQQYWNALPLEK-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANE 349 (364)
T ss_dssp CCCCCTTCHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHH
T ss_pred eeCCCCchhHHHHHHHHHh-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHH
Confidence 9987 799999999988 499998865 556799999999998 7776665554443332 23444455555
Q ss_pred HHHHHHh
Q 042709 389 FISQIKV 395 (398)
Q Consensus 389 ~~~~~~~ 395 (398)
+.+.+++
T Consensus 350 ~~~~y~~ 356 (364)
T 1f0k_A 350 VSRVARA 356 (364)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 5555544
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.46 E-value=7.4e-13 Score=117.49 Aligned_cols=64 Identities=8% Similarity=0.014 Sum_probs=56.6
Q ss_pred cceecccCcc-cccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecC
Q 042709 270 GKIVEWAPQE-NDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLP 337 (398)
Q Consensus 270 ~~v~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~ 337 (398)
+.+..++++. .+|..+++ +||+|| +|++|++..|+|++++|...+|..||..+++ .|+++.+..
T Consensus 210 v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 210 IRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp EEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred EEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 4566888766 58888888 999999 8999999999999999999999999999999 599998854
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.29 E-value=1.2e-12 Score=111.49 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=59.4
Q ss_pred cccCcc-cccC-CCCcceEEecCCcchHHHHHhcCCceecccCc----cchhhHHHhhccceeeEEEecCCCCCCcCHHH
Q 042709 274 EWAPQE-NDLG-HPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSF----ADQHHNRNYICDVWKIGVQLLPDENGIITRQE 347 (398)
Q Consensus 274 ~~vpq~-~lL~-~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~ 347 (398)
+|+++. .+|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++ .|+|+.+ ++++
T Consensus 120 ~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~-~G~~~~~--------~~~~ 188 (224)
T 2jzc_A 120 DFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE-LGYVWSC--------APTE 188 (224)
T ss_dssp CSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH-HSCCCEE--------CSCT
T ss_pred eccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH-CCCEEEc--------CHHH
Confidence 454544 6888 8888 99999999999999999999999984 469999999999 5998765 4567
Q ss_pred HHHHHHHH
Q 042709 348 IQINVKAL 355 (398)
Q Consensus 348 l~~ai~~~ 355 (398)
|.++|.++
T Consensus 189 L~~~i~~l 196 (224)
T 2jzc_A 189 TGLIAGLR 196 (224)
T ss_dssp TTHHHHHH
T ss_pred HHHHHHHH
Confidence 77777776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.20 E-value=4.7e-09 Score=99.84 Aligned_cols=82 Identities=12% Similarity=0.045 Sum_probs=60.6
Q ss_pred cceecccCcc---cccCCCCcceEEec----CCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCC
Q 042709 270 GKIVEWAPQE---NDLGHPSIAWFLSH----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGI 342 (398)
Q Consensus 270 ~~v~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 342 (398)
+.+.+++|+. .+++.+++ +|.- |..+++.||+.+|+|+|+.+ .......+.+. +.|+.++.
T Consensus 308 v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~----- 375 (438)
T 3c48_A 308 IRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAAR----VGGLPIAVAEG-ETGLLVDG----- 375 (438)
T ss_dssp EEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEES----CTTHHHHSCBT-TTEEEESS-----
T ss_pred EEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecC----CCChhHHhhCC-CcEEECCC-----
Confidence 4566888764 57778888 7654 33458999999999999964 44556666663 67888854
Q ss_pred cCHHHHHHHHHHHhcCHHHHH
Q 042709 343 ITRQEIQINVKALLKNDGIKG 363 (398)
Q Consensus 343 ~~~~~l~~ai~~~l~~~~~~~ 363 (398)
-+.+++.++|.++++|++.++
T Consensus 376 ~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 376 HSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp CCHHHHHHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHH
Confidence 479999999999999975443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.18 E-value=1.3e-09 Score=102.00 Aligned_cols=106 Identities=11% Similarity=0.051 Sum_probs=69.1
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC
Q 042709 9 CRQPHVLVIPF--P--ALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE 84 (398)
Q Consensus 9 m~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
|++|||++++. + ..|.-.-+..|++.| +||+|++++........... ....++.+..++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY------DKTLDYEVIRWPRSVMLP--- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH------HTTCSSEEEEESSSSCCS---
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh------ccccceEEEEcccccccc---
Confidence 56799998874 3 468888899999999 79999999987765421111 112368888776432111
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcch--hHHHHHHHhCCceEE
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVG--WALEVAEAIGIARAA 128 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~--~~~~~A~~lgiP~v~ 128 (398)
.......+.+.++.. ||+|++..... ....+++.+++|.+.
T Consensus 71 ---~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i 114 (394)
T 3okp_A 71 ---TPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVI 114 (394)
T ss_dssp ---CHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEE
T ss_pred ---chhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEE
Confidence 123444455555556 99999865543 456678889998444
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.17 E-value=2.9e-10 Score=106.04 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=61.3
Q ss_pred cceecccCc---ccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 270 GKIVEWAPQ---ENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 270 ~~v~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.+.+++++ ..+|+.+++ ||+++| |.+.||+.+|+|+|+.+...++... .+ -|.|+.++ .+++
T Consensus 257 v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d~~ 322 (376)
T 1v4v_A 257 FVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TDPE 322 (376)
T ss_dssp EEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SCHH
T ss_pred EEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CCHH
Confidence 444444444 478888888 999884 4456999999999998876666653 24 27787773 2899
Q ss_pred HHHHHHHHHhcCHHHHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGNSLK 367 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~a~~ 367 (398)
+|.++|.++++|++.+++..+
T Consensus 323 ~la~~i~~ll~d~~~~~~~~~ 343 (376)
T 1v4v_A 323 GVYRVVKGLLENPEELSRMRK 343 (376)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHhChHhhhhhcc
Confidence 999999999999865554443
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.04 E-value=4.2e-09 Score=99.03 Aligned_cols=83 Identities=8% Similarity=0.170 Sum_probs=61.7
Q ss_pred cceecccCcc---cccCCCCcceEEe----cCCcc-hHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCC
Q 042709 270 GKIVEWAPQE---NDLGHPSIAWFLS----HCGWN-STMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENG 341 (398)
Q Consensus 270 ~~v~~~vpq~---~lL~~~~~~~~It----HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 341 (398)
+.+.+++|+. .++..+++ +|. +.|++ ++.||+.+|+|+|+-+ .......+.+. +.|+.++.
T Consensus 265 v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~---- 333 (406)
T 2gek_A 265 LRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASD----LDAFRRVLADG-DAGRLVPV---- 333 (406)
T ss_dssp EEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECC----CHHHHHHHTTT-TSSEECCT----
T ss_pred EEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEec----CCcHHHHhcCC-CceEEeCC----
Confidence 4566888874 68888888 663 34444 8999999999999964 45566666652 67777743
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHH
Q 042709 342 IITRQEIQINVKALLKNDGIKGN 364 (398)
Q Consensus 342 ~~~~~~l~~ai~~~l~~~~~~~~ 364 (398)
-+.+++.++|.++++|++.+++
T Consensus 334 -~d~~~l~~~i~~l~~~~~~~~~ 355 (406)
T 2gek_A 334 -DDADGMAAALIGILEDDQLRAG 355 (406)
T ss_dssp -TCHHHHHHHHHHHHHCHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCHHHHHH
Confidence 3789999999999999865443
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.00 E-value=3.4e-08 Score=93.71 Aligned_cols=108 Identities=11% Similarity=0.003 Sum_probs=70.1
Q ss_pred ceecccCccc---ccCCCCcceEEec----CCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCc
Q 042709 271 KIVEWAPQEN---DLGHPSIAWFLSH----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGII 343 (398)
Q Consensus 271 ~v~~~vpq~~---lL~~~~~~~~ItH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 343 (398)
.+.+|+|+.+ +++.+++ +|.- |-.+++.||+.+|+|+|+- |.......+.+ |.|..++. -
T Consensus 314 ~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s----~~~~~~e~~~~--~~g~~~~~-----~ 380 (439)
T 3fro_A 314 VITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIAS----AVGGLRDIITN--ETGILVKA-----G 380 (439)
T ss_dssp EECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEE----SSTHHHHHCCT--TTCEEECT-----T
T ss_pred EEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEc----CCCCcceeEEc--CceEEeCC-----C
Confidence 3457788754 6778888 6632 4456899999999999995 44455555544 68888854 4
Q ss_pred CHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 344 TRQEIQINVKALLK-NDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 344 ~~~~l~~ai~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
+.+++.++|.++++ |++.+++..+-+....+ .-+-...++++.+.+.+
T Consensus 381 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 381 DPGELANAILKALELSRSDLSKFRENCKKRAM----SFSWEKSAERYVKAYTG 429 (439)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH----TSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh----hCcHHHHHHHHHHHHHH
Confidence 79999999999998 76433333222222221 34445555666655544
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.98 E-value=2.2e-09 Score=100.97 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=71.5
Q ss_pred cceecccC---cccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 270 GKIVEWAP---QENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 270 ~~v~~~vp---q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.+.++++ ...+++.+++ +|+-.|.. ..||..+|+|+|+.|-..+++.. + + -|.|+.+. .+++
T Consensus 284 v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e~---v-~-~g~~~lv~------~d~~ 349 (403)
T 3ot5_A 284 IHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPEG---I-E-AGTLKLIG------TNKE 349 (403)
T ss_dssp EEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHHH---H-H-HTSEEECC------SCHH
T ss_pred EEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchhh---e-e-CCcEEEcC------CCHH
Confidence 44556654 4467777887 99987532 26999999999999766665542 3 4 38787773 2899
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQI 393 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 393 (398)
+|.++|.++++|++.+++..+.+..+ +.++++.+.++.+.+.+
T Consensus 350 ~l~~ai~~ll~~~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 350 NLIKEALDLLDNKESHDKMAQAANPY----GDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHSCCTT----CCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCHHHHHHHHhhcCcc----cCCcHHHHHHHHHHHHh
Confidence 99999999999987665554332222 34556566655555544
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.95 E-value=1.3e-07 Score=88.58 Aligned_cols=81 Identities=15% Similarity=0.072 Sum_probs=57.4
Q ss_pred eecccC-cccccCCCCcceEE----ecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 272 IVEWAP-QENDLGHPSIAWFL----SHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 272 v~~~vp-q~~lL~~~~~~~~I----tHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.++.. -..+++.+++ +| .-|..+++.||+.+|+|+|+.+. ......+.+. +.|+.++. -+.+
T Consensus 271 ~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~----~~~~e~v~~~-~~g~~~~~-----~d~~ 338 (394)
T 2jjm_A 271 FLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV----GGIPEVIQHG-DTGYLCEV-----GDTT 338 (394)
T ss_dssp CCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC----TTSTTTCCBT-TTEEEECT-----TCHH
T ss_pred EeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC----CChHHHhhcC-CceEEeCC-----CCHH
Confidence 334433 2357778888 77 55667789999999999999654 3344445442 57877754 3789
Q ss_pred HHHHHHHHHhcCHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGN 364 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~ 364 (398)
++.++|.++++|++.+++
T Consensus 339 ~la~~i~~l~~~~~~~~~ 356 (394)
T 2jjm_A 339 GVADQAIQLLKDEELHRN 356 (394)
T ss_dssp HHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHcCHHHHHH
Confidence 999999999999864443
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.95 E-value=6.1e-09 Score=97.24 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=59.2
Q ss_pred cceecccCc---ccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 270 GKIVEWAPQ---ENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 270 ~~v~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.+.+++++ ..+++.+++ ||+.+| +.+.||+.+|+|+|+.+...+... +.+ -|.|+.++ . +++
T Consensus 265 v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~----~--d~~ 330 (384)
T 1vgv_A 265 VILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG----T--DKQ 330 (384)
T ss_dssp EEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC----S--SHH
T ss_pred EEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC----C--CHH
Confidence 344444553 457888888 999985 448899999999999987444332 234 27888884 2 899
Q ss_pred HHHHHHHHHhcCHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGN 364 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~ 364 (398)
+|.++|.++++|++.+++
T Consensus 331 ~la~~i~~ll~d~~~~~~ 348 (384)
T 1vgv_A 331 RIVEEVTRLLKDENEYQA 348 (384)
T ss_dssp HHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHhChHHHhh
Confidence 999999999999865544
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.92 E-value=3.5e-07 Score=88.48 Aligned_cols=83 Identities=13% Similarity=0.092 Sum_probs=58.7
Q ss_pred cceecccCccc---ccCCC----CcceEEec----CCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCC
Q 042709 270 GKIVEWAPQEN---DLGHP----SIAWFLSH----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPD 338 (398)
Q Consensus 270 ~~v~~~vpq~~---lL~~~----~~~~~ItH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 338 (398)
+.+.+++|+.+ +++.+ ++ +|.- |-..++.||+.+|+|+|+-. .......+.+. +.|+.++.
T Consensus 337 V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~- 408 (499)
T 2r60_A 337 VSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP- 408 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-
T ss_pred EEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-
Confidence 44557877553 56667 66 7632 33458999999999999964 34455556552 47887854
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHHHH
Q 042709 339 ENGIITRQEIQINVKALLKNDGIKGN 364 (398)
Q Consensus 339 ~~~~~~~~~l~~ai~~~l~~~~~~~~ 364 (398)
-+.+++.++|.++++|++.+++
T Consensus 409 ----~d~~~la~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 409 ----EDPEDIARGLLKAFESEETWSA 430 (499)
T ss_dssp ----TCHHHHHHHHHHHHSCHHHHHH
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHH
Confidence 4789999999999999864443
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.89 E-value=8.4e-09 Score=94.75 Aligned_cols=83 Identities=11% Similarity=0.018 Sum_probs=58.9
Q ss_pred cceecccCcc---cccCCCCcceEEe-------------cCC-cchHHHHHhcCCceecccCccchhhHHHhhcc--cee
Q 042709 270 GKIVEWAPQE---NDLGHPSIAWFLS-------------HCG-WNSTMEGLSMGVPFLCWPSFADQHHNRNYICD--VWK 330 (398)
Q Consensus 270 ~~v~~~vpq~---~lL~~~~~~~~It-------------HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~--~~g 330 (398)
+.+.+|+|+. .+++.+++ +|. +-| .+++.||+.+|+|+|+-.. ..+...+.+ . +
T Consensus 214 v~~~g~~~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~ 286 (342)
T 2iuy_A 214 VEPIGEVGGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-V 286 (342)
T ss_dssp EEECCCCCHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-E
T ss_pred EEEeccCCHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-C
Confidence 5567889875 67888888 663 233 4579999999999999654 445555654 3 4
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 042709 331 IGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLK 369 (398)
Q Consensus 331 ~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~ 369 (398)
.|+.+ .. +.+++.++|.++++ .+++++..
T Consensus 287 ~g~~~-----~~-d~~~l~~~i~~l~~----~~~~~~~~ 315 (342)
T 2iuy_A 287 VGYGT-----DF-APDEARRTLAGLPA----SDEVRRAA 315 (342)
T ss_dssp CCSSS-----CC-CHHHHHHHHHTSCC----HHHHHHHH
T ss_pred ceEEc-----CC-CHHHHHHHHHHHHH----HHHHHHHH
Confidence 56555 34 89999999999997 44554443
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.88 E-value=2.8e-08 Score=92.38 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=58.0
Q ss_pred cceecccCc---ccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 270 GKIVEWAPQ---ENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 270 ~~v~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.+.+++++ ..+++.+++ ||+..| +.+.||+.+|+|+|+.......+. +.+ -|.|+.++ . +.+
T Consensus 265 v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~-~g~g~~v~-----~-d~~ 330 (375)
T 3beo_A 265 IHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIE-AGTLKLAG-----T-DEE 330 (375)
T ss_dssp EEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHH-TTSEEECC-----S-CHH
T ss_pred EEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eec-CCceEEcC-----C-CHH
Confidence 445455554 457778888 998874 458899999999998854333322 234 27887773 2 889
Q ss_pred HHHHHHHHHhcCHHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGNS 365 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~a 365 (398)
+|.++|.++++|++.+++.
T Consensus 331 ~la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 331 TIFSLADELLSDKEAHDKM 349 (375)
T ss_dssp HHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHhChHhHhhh
Confidence 9999999999998655443
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.83 E-value=1.6e-08 Score=94.87 Aligned_cols=84 Identities=17% Similarity=0.116 Sum_probs=59.9
Q ss_pred cceeccc---CcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHH
Q 042709 270 GKIVEWA---PQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQ 346 (398)
Q Consensus 270 ~~v~~~v---pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~ 346 (398)
+.+.+++ ....+++.+++ +|+-.| |.+.||..+|+|+|+..-..+++. +.+ -|.++.++. +++
T Consensus 290 v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~~------d~~ 355 (396)
T 3dzc_A 290 IVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVGT------NQQ 355 (396)
T ss_dssp EEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECTT------CHH
T ss_pred EEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcCC------CHH
Confidence 3444444 34467888888 999987 666799999999999755445432 234 277766532 699
Q ss_pred HHHHHHHHHhcCHHHHHHHHH
Q 042709 347 EIQINVKALLKNDGIKGNSLK 367 (398)
Q Consensus 347 ~l~~ai~~~l~~~~~~~~a~~ 367 (398)
+|.++|.++++|++.+++..+
T Consensus 356 ~l~~ai~~ll~d~~~~~~m~~ 376 (396)
T 3dzc_A 356 QICDALSLLLTDPQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHcCHHHHHHHhh
Confidence 999999999999876655544
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.79 E-value=1.8e-06 Score=79.91 Aligned_cols=86 Identities=12% Similarity=0.204 Sum_probs=60.9
Q ss_pred ceecccCc-ccccCCCCcceEEe----cCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCH
Q 042709 271 KIVEWAPQ-ENDLGHPSIAWFLS----HCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITR 345 (398)
Q Consensus 271 ~v~~~vpq-~~lL~~~~~~~~It----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~ 345 (398)
.+.++... ..+++.+++ +|. -|..+++.||+.+|+|+|+.+. ..+...+++. +.|..++ ..-+.
T Consensus 256 ~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~ 324 (374)
T 2iw1_A 256 HFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQ 324 (374)
T ss_dssp EEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCH
T ss_pred EECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCH
Confidence 33444332 446777787 775 5667789999999999999654 4455566663 7888884 13489
Q ss_pred HHHHHHHHHHhcCHHHHHHHHH
Q 042709 346 QEIQINVKALLKNDGIKGNSLK 367 (398)
Q Consensus 346 ~~l~~ai~~~l~~~~~~~~a~~ 367 (398)
+++.++|.++++|++.+++..+
T Consensus 325 ~~l~~~i~~l~~~~~~~~~~~~ 346 (374)
T 2iw1_A 325 EQLNEVLRKALTQSPLRMAWAE 346 (374)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHcChHHHHHHHH
Confidence 9999999999999865544433
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.76 E-value=5e-07 Score=85.20 Aligned_cols=81 Identities=16% Similarity=0.056 Sum_probs=58.3
Q ss_pred cceecccC---c---ccccCCCCcceEEecC----CcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCC
Q 042709 270 GKIVEWAP---Q---ENDLGHPSIAWFLSHC----GWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDE 339 (398)
Q Consensus 270 ~~v~~~vp---q---~~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 339 (398)
+.+.+|++ + ..+++.+++ +|.-. ..+++.||+++|+|+|+.+ -..+...+.+. +.|+.+
T Consensus 295 V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~----~~g~~e~i~~~-~~g~l~---- 363 (416)
T 2x6q_A 295 VKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRA----VGGIKFQIVDG-ETGFLV---- 363 (416)
T ss_dssp EEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEES----CHHHHHHCCBT-TTEEEE----
T ss_pred EEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEcc----CCCChhheecC-CCeEEE----
Confidence 44556554 2 346777777 77544 4568999999999999964 45566666663 678777
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHH
Q 042709 340 NGIITRQEIQINVKALLKNDGIKGN 364 (398)
Q Consensus 340 ~~~~~~~~l~~ai~~~l~~~~~~~~ 364 (398)
. +.+++.++|.++++|++.+++
T Consensus 364 -~--d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 364 -R--DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp -S--SHHHHHHHHHHHHHCHHHHHH
T ss_pred -C--CHHHHHHHHHHHHhCHHHHHH
Confidence 2 789999999999999865443
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.57 E-value=1.1e-05 Score=81.72 Aligned_cols=69 Identities=12% Similarity=0.143 Sum_probs=49.3
Q ss_pred CCCcceEEec----CCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHh---
Q 042709 284 HPSIAWFLSH----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALL--- 356 (398)
Q Consensus 284 ~~~~~~~ItH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l--- 356 (398)
.+++ ||.- |-..++.||+++|+|+|+- |.......+.+. +.|+.++. -+.+++.++|.+++
T Consensus 664 aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D~e~LA~aI~~lL~~L 731 (816)
T 3s28_A 664 TKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YHGDQAADTLADFFTKC 731 (816)
T ss_dssp TTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TSHHHHHHHHHHHHHHH
T ss_pred cCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CCHHHHHHHHHHHHHHh
Confidence 3455 7743 3456899999999999994 555666666663 67888854 47899999997776
Q ss_pred -cCHHHHHH
Q 042709 357 -KNDGIKGN 364 (398)
Q Consensus 357 -~~~~~~~~ 364 (398)
+|++.+++
T Consensus 732 l~d~~~~~~ 740 (816)
T 3s28_A 732 KEDPSHWDE 740 (816)
T ss_dssp HHCTHHHHH
T ss_pred ccCHHHHHH
Confidence 77754443
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.35 E-value=2.7e-06 Score=79.24 Aligned_cols=98 Identities=14% Similarity=-0.001 Sum_probs=63.6
Q ss_pred cccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhc
Q 042709 278 QENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLK 357 (398)
Q Consensus 278 q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~ 357 (398)
...+++++++ +||-.|. .+.||..+|+|+|+++...+-+. .+ + .|.++.+. .++++|.+++.++++
T Consensus 276 ~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~-~G~~~lv~------~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 276 YVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-D-AGTLIMSG------FKAERVLQAVKTITE 341 (385)
T ss_dssp HHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-H-HTCCEECC------SSHHHHHHHHHHHHT
T ss_pred HHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-h-cCceEEcC------CCHHHHHHHHHHHHh
Confidence 3457888888 9999876 46899999999999987554222 13 4 27776663 279999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 042709 358 NDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQ 392 (398)
Q Consensus 358 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 392 (398)
|+..+++..+-...+ .++|+++.+.++.+.+.
T Consensus 342 d~~~~~~m~~~~~~~---~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 342 EHDNNKRTQGLVPDY---NEAGLVSKKILRIVLSY 373 (385)
T ss_dssp TCBTTBCCSCCCHHH---HTCCCHHHHHHHHHHHH
T ss_pred ChHHHHHhhccCCCC---CCCChHHHHHHHHHHHH
Confidence 874332211111112 03466666555544443
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.26 E-value=0.00015 Score=69.54 Aligned_cols=98 Identities=11% Similarity=-0.028 Sum_probs=63.4
Q ss_pred cccCCCCcceEEec----CCcchHHHHHhcCCceecccCccchhhHHHhhccce---------eeEEEecCCCCCCcCHH
Q 042709 280 NDLGHPSIAWFLSH----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVW---------KIGVQLLPDENGIITRQ 346 (398)
Q Consensus 280 ~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~l~~~~~~~~~~~ 346 (398)
.+++.+++ +|.- |...++.||+.+|+|+|+-. -..+...+.+ - +.|+.++. -+.+
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~----~gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~ 429 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRR----TGGLADTVSD-CSLENLADGVASGFVFED-----SNAW 429 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEES----SHHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECC----CCCccceecc-CccccccccccceEEECC-----CCHH
Confidence 56777887 7632 44568899999999999964 3455555554 2 47777754 4799
Q ss_pred HHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 347 EIQINVKALL---KNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 347 ~l~~ai~~~l---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
++.++|.+++ +|++.+++.. +..++ +.-+-...++++.+-+.+
T Consensus 430 ~la~~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 430 SLLRAIRRAFVLWSRPSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHH
Confidence 9999999999 6776544333 22222 233444555555555544
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.21 E-value=6.5e-05 Score=72.16 Aligned_cols=98 Identities=10% Similarity=0.027 Sum_probs=62.8
Q ss_pred cccCCCCcceEEe----cCCcchHHHHHhcCCceecccCccchhhHHHhhccce---------eeEEEecCCCCCCcCHH
Q 042709 280 NDLGHPSIAWFLS----HCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVW---------KIGVQLLPDENGIITRQ 346 (398)
Q Consensus 280 ~lL~~~~~~~~It----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~l~~~~~~~~~~~ 346 (398)
.+++.+++ +|. -|...++.||+.+|+|+|+-. -......+.+ - +.|+.++. -+.+
T Consensus 361 ~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~ 428 (485)
T 1rzu_A 361 LMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVAR----TGGLADTVID-ANHAALASKAATGVQFSP-----VTLD 428 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEES----SHHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHH
T ss_pred HHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeC----CCChhheecc-cccccccccCCcceEeCC-----CCHH
Confidence 46777887 763 344568999999999999954 3455555554 2 47777743 4789
Q ss_pred HHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 347 EIQINVKALL---KNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 347 ~l~~ai~~~l---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
++.++|.+++ +|++.+++. ++..++ +.=+-...++++.+.+.+
T Consensus 429 ~la~~i~~ll~~~~~~~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 429 GLKQAIRRTVRYYHDPKLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHH---HHHHHH---HhCChHHHHHHHHHHHHH
Confidence 9999999999 787644433 322222 233334445555554443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.93 E-value=0.005 Score=60.15 Aligned_cols=88 Identities=13% Similarity=0.083 Sum_probs=57.3
Q ss_pred cceecccCcc---cccCCCCcceEEe---cCCcchHHHHHhcCCceecccCccchhhH-HHhhccceeeEEEecCCCCCC
Q 042709 270 GKIVEWAPQE---NDLGHPSIAWFLS---HCGWNSTMEGLSMGVPFLCWPSFADQHHN-RNYICDVWKIGVQLLPDENGI 342 (398)
Q Consensus 270 ~~v~~~vpq~---~lL~~~~~~~~It---HgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~~~~~~g~g~~l~~~~~~~ 342 (398)
+.+.+++|+. .+++.+++ ||. .|+.+++.||+.+|+|+|++|-..=.... +..+.+ .|+.-.+. .
T Consensus 436 v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~----~- 507 (568)
T 2vsy_A 436 LVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV----A- 507 (568)
T ss_dssp EEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----S-
T ss_pred EEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----C-
Confidence 4556888744 46778887 762 26677899999999999997743111111 222323 24433332 1
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHH
Q 042709 343 ITRQEIQINVKALLKNDGIKGNSL 366 (398)
Q Consensus 343 ~~~~~l~~ai~~~l~~~~~~~~a~ 366 (398)
+.+++.++|.++++|++.+++..
T Consensus 508 -~~~~la~~i~~l~~~~~~~~~~~ 530 (568)
T 2vsy_A 508 -DDAAFVAKAVALASDPAALTALH 530 (568)
T ss_dssp -SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred -CHHHHHHHHHHHhcCHHHHHHHH
Confidence 88999999999999987555443
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.83 E-value=0.00074 Score=63.24 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=52.6
Q ss_pred cceecccCccc---ccCCCCcceEEe---cCC-cchHHHHH-------hcCCceecccCccchhhHHHhhccceeeEEE-
Q 042709 270 GKIVEWAPQEN---DLGHPSIAWFLS---HCG-WNSTMEGL-------SMGVPFLCWPSFADQHHNRNYICDVWKIGVQ- 334 (398)
Q Consensus 270 ~~v~~~vpq~~---lL~~~~~~~~It---HgG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~- 334 (398)
+.+.+++|+.+ +++.+++ +|. ..| .+++.||+ .+|+|+|+-.. +.+. ..|..
T Consensus 267 V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~ 333 (406)
T 2hy7_A 267 VIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFG 333 (406)
T ss_dssp EEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEE
T ss_pred EEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEE
Confidence 34557777643 5777887 663 334 45688999 99999999643 5442 56776
Q ss_pred ecCCCCCCcCHHHHHHHHHHHhcCHH
Q 042709 335 LLPDENGIITRQEIQINVKALLKNDG 360 (398)
Q Consensus 335 l~~~~~~~~~~~~l~~ai~~~l~~~~ 360 (398)
++. -+.+++.++|.++++|+.
T Consensus 334 v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 334 YTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp ECT-----TCHHHHHHHHHHHHHCCC
T ss_pred eCC-----CCHHHHHHHHHHHHhCcc
Confidence 644 378999999999999875
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.66 E-value=4.7e-05 Score=62.44 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=56.3
Q ss_pred ccccCCCCcceEEe---cCCcc-hHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHH
Q 042709 279 ENDLGHPSIAWFLS---HCGWN-STMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKA 354 (398)
Q Consensus 279 ~~lL~~~~~~~~It---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~ 354 (398)
..+++.+++ +|. +.|++ ++.||+.+|+|+|+. |...+...+.+. +.|+.+ . -+.+++.++|.+
T Consensus 92 ~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~----~~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~ 158 (177)
T 2f9f_A 92 IDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAV----NEGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKK 158 (177)
T ss_dssp HHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEE----SSHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHH
T ss_pred HHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEe----CCCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHH
Confidence 345666777 655 34444 899999999999995 445666666652 577777 3 278999999999
Q ss_pred HhcCHHH-HHHHHHHHH
Q 042709 355 LLKNDGI-KGNSLKLKE 370 (398)
Q Consensus 355 ~l~~~~~-~~~a~~l~~ 370 (398)
+++|+.. ++++++.++
T Consensus 159 l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 159 VSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHCTTTTHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHh
Confidence 9988764 666655443
No 46
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.62 E-value=0.0071 Score=50.02 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=57.4
Q ss_pred cce-ecccCcc---cccCCCCcceEEecC---C-cchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCC
Q 042709 270 GKI-VEWAPQE---NDLGHPSIAWFLSHC---G-WNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENG 341 (398)
Q Consensus 270 ~~v-~~~vpq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 341 (398)
+.+ .+++++. .+++.+++ +|.-. | ..++.||+.+|+|+|+.. ...+...+ + -+.|..++.
T Consensus 97 v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~-~~~g~~~~~---- 164 (200)
T 2bfw_A 97 VKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-T-NETGILVKA---- 164 (200)
T ss_dssp EEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-C-TTTCEEECT----
T ss_pred EEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-C-CCceEEecC----
Confidence 445 5666643 46777887 66432 3 457899999999999864 44555555 4 267777743
Q ss_pred CcCHHHHHHHHHHHhc-CHHHHHH
Q 042709 342 IITRQEIQINVKALLK-NDGIKGN 364 (398)
Q Consensus 342 ~~~~~~l~~ai~~~l~-~~~~~~~ 364 (398)
-+.+++.++|.++++ |+..+++
T Consensus 165 -~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 165 -GDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp -TCHHHHHHHHHHHHHCCHHHHHH
T ss_pred -CCHHHHHHHHHHHHhcCHHHHHH
Confidence 379999999999999 9754433
No 47
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.58 E-value=0.0014 Score=59.59 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=72.6
Q ss_pred cceecccCccccc---CCCCcceEEecCCc---------chHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecC
Q 042709 270 GKIVEWAPQENDL---GHPSIAWFLSHCGW---------NSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLP 337 (398)
Q Consensus 270 ~~v~~~vpq~~lL---~~~~~~~~ItHgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~ 337 (398)
+...+|+|+.++. +.++.+++.+-+.+ +-+.|++++|+|+|+. +...++..+++. |+|+.++
T Consensus 216 V~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~- 289 (339)
T 3rhz_A 216 VHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK- 289 (339)
T ss_dssp EEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES-
T ss_pred EEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC-
Confidence 5566889987754 34455444422322 3478999999999985 455677777774 9999883
Q ss_pred CCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042709 338 DENGIITRQEIQINVKALLKND--GIKGNSLKLKEIARKILVEGGSSFRKFDSFIS 391 (398)
Q Consensus 338 ~~~~~~~~~~l~~ai~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 391 (398)
+.+++.++|..+..++ .+++|+++.+++++. |-.....+.+-+.
T Consensus 290 ------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 290 ------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVF 335 (339)
T ss_dssp ------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHH
Confidence 4688999998876543 588889888888875 4444555554443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.53 E-value=0.018 Score=57.94 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=31.5
Q ss_pred ceecccCcc---cccCCCCcceEEe---cCCcchHHHHHhcCCceecccC
Q 042709 271 KIVEWAPQE---NDLGHPSIAWFLS---HCGWNSTMEGLSMGVPFLCWPS 314 (398)
Q Consensus 271 ~v~~~vpq~---~lL~~~~~~~~It---HgG~~s~~eal~~GvP~v~~P~ 314 (398)
.+.+..|.. ..+...++ ++- .+|.+|+.|||++|||+|.++-
T Consensus 583 ~f~~~~~~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g 630 (723)
T 4gyw_A 583 IFSPVAPKEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG 630 (723)
T ss_dssp EEEECCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred EECCCCCHHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC
Confidence 344555543 44555665 865 8999999999999999999984
No 49
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.47 E-value=0.0046 Score=57.07 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=56.3
Q ss_pred cccCCCCcceEEec-----CCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHH
Q 042709 280 NDLGHPSIAWFLSH-----CGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKA 354 (398)
Q Consensus 280 ~lL~~~~~~~~ItH-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~ 354 (398)
.+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.++... +.++|.++|.+
T Consensus 273 ~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~-------d~~~La~ai~~ 342 (374)
T 2xci_A 273 ELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK-------NETELVTKLTE 342 (374)
T ss_dssp HHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------SHHHHHHHHHH
T ss_pred HHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------CHHHHHHHHHH
Confidence 35555665 5542 34478999999999999877766666666655443 7776652 68999999999
Q ss_pred HhcCHH----HHHHHHHHHHH
Q 042709 355 LLKNDG----IKGNSLKLKEI 371 (398)
Q Consensus 355 ~l~~~~----~~~~a~~l~~~ 371 (398)
+++| + +.+++++..+.
T Consensus 343 ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 343 LLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHS-CCCCCHHHHHHHHHHH
T ss_pred HHhH-HHHHHHHHHHHHHHHh
Confidence 9988 5 45555554433
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.39 E-value=0.043 Score=43.63 Aligned_cols=101 Identities=12% Similarity=0.218 Sum_probs=62.0
Q ss_pred EEEEEeCCcccCCHHHHHHhhc-----cceecccCcc---cccCCCCcceEEe----cCCcchHHHHHhcCC-ceecccC
Q 042709 248 VTYVAFGRFSILGQEQLEQLAL-----GKIVEWAPQE---NDLGHPSIAWFLS----HCGWNSTMEGLSMGV-PFLCWPS 314 (398)
Q Consensus 248 vVyvs~Gs~~~~~~~~~~~~~~-----~~v~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~Gv-P~v~~P~ 314 (398)
+-++-.|.. ...+.+.+++. +.+ +|+|+. .+++.+++ +|. -|...++.||+.+|+ |+|+-..
T Consensus 33 ~~l~i~G~g--~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~ 107 (166)
T 3qhp_A 33 IVLLLKGKG--PDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSP 107 (166)
T ss_dssp EEEEEECCS--TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT
T ss_pred eEEEEEeCC--ccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCC
Confidence 444445642 23445555443 455 888864 46878888 765 244459999999996 9999322
Q ss_pred ccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHH
Q 042709 315 FADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGN 364 (398)
Q Consensus 315 ~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~ 364 (398)
.......+.+. +. .+. .-+.+++.++|.++++|++.+++
T Consensus 108 ---~~~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l~~~~~~~~~ 146 (166)
T 3qhp_A 108 ---LSATRQFALDE-RS--LFE-----PNNAKDLSAKIDWWLENKLERER 146 (166)
T ss_dssp ---TCGGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHHHHCHHHHHH
T ss_pred ---CCchhhhccCC-ce--EEc-----CCCHHHHHHHHHHHHhCHHHHHH
Confidence 22222223331 33 332 23899999999999999854433
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.09 E-value=0.016 Score=56.28 Aligned_cols=88 Identities=11% Similarity=0.064 Sum_probs=54.1
Q ss_pred cceecccCccc---ccCCCCcceEEe---cCCcchHHHHHhcCCceecccCccchhhH-HHhhccceeeEEE-ecCCCCC
Q 042709 270 GKIVEWAPQEN---DLGHPSIAWFLS---HCGWNSTMEGLSMGVPFLCWPSFADQHHN-RNYICDVWKIGVQ-LLPDENG 341 (398)
Q Consensus 270 ~~v~~~vpq~~---lL~~~~~~~~It---HgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~~~~~~g~g~~-l~~~~~~ 341 (398)
+.+.+.+|+.+ .+..+++ |+. .+|..|+.||+++|||+|+++-..=.-.. +..+.. .|+.-. +.
T Consensus 501 v~F~g~~p~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA----- 572 (631)
T 3q3e_A 501 ATAHPHSPYHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA----- 572 (631)
T ss_dssp EEEECCCCHHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE-----
T ss_pred EEEcCCCCHHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec-----
Confidence 44557777554 4467777 653 37889999999999999998742111111 111222 344321 21
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHH
Q 042709 342 IITRQEIQINVKALLKNDGIKGNSL 366 (398)
Q Consensus 342 ~~~~~~l~~ai~~~l~~~~~~~~a~ 366 (398)
-+.++..+...++.+|++.+++.+
T Consensus 573 -~d~eeYv~~Av~La~D~~~l~~LR 596 (631)
T 3q3e_A 573 -NTVDEYVERAVRLAENHQERLELR 596 (631)
T ss_dssp -SSHHHHHHHHHHHHHCHHHHHHHH
T ss_pred -CCHHHHHHHHHHHhCCHHHHHHHH
Confidence 267788888888999986555443
No 52
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.01 E-value=0.015 Score=54.20 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=63.2
Q ss_pred cccCccc---ccCCCCcceEEe----cCCcchHHHHHhcCCceecccCccchhhHHHhhccceee---------------
Q 042709 274 EWAPQEN---DLGHPSIAWFLS----HCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKI--------------- 331 (398)
Q Consensus 274 ~~vpq~~---lL~~~~~~~~It----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~--------------- 331 (398)
+|+|+.+ +++.+++ +|. -|...++.||+.+|+|+|+-. -......+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc--Ccccccccccccccccc
Confidence 7888443 5777787 663 233458999999999999954 4444444443 22
Q ss_pred -EE--EecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 332 -GV--QLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 332 -g~--~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
|+ .+.. -+.+++.++| ++++|++.+++..+ ..++.+.+.=+-...++++.+.+++
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~---~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGK---RVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHH---HHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33 4432 3899999999 99999865544333 3332222233444444444444443
No 53
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.86 E-value=0.13 Score=43.86 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=68.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKL 91 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
||||+.---+. |.--+.+|+++|.+.| +|+++.+.....-..... .....+.+..+..+.. ..-...+...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-----t~~~pl~~~~~~~~~~--~~v~GTPaDC 72 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-----TFTEPLKMRKIDTDFY--TVIDGTPADC 72 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-----CCSSCEEEEEEETTEE--EETTCCHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce-----ecCCCeEEEEecCCCe--EEECCCHHHH
Confidence 78888776654 4556889999999998 999999987654432221 2233566666543321 1123334333
Q ss_pred Hh-hchhhccCC-ccEEEec----------Ccch---hHHHHHHHhCCceEEEcC
Q 042709 92 MT-EDPQADTEC-TACVIAD----------ISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 92 ~~-~~~~~~~~~-pD~vi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
+. .+...+.+. ||+||+- .+++ +|+.-|..+|||.+.|+.
T Consensus 73 V~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 73 VHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 22 233333445 9999973 3333 456667788999999875
No 54
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=94.67 E-value=0.061 Score=46.06 Aligned_cols=112 Identities=14% Similarity=0.084 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPH 89 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
++||||+.---+. |---+.+|+++|.+ +|+|+++.+.....-..... +....+.+....++. ..-...+.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~---~~v~GTPa 79 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL-----TLNAPLHIKNLENGM---ISVEGTPT 79 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC-----CCSSCEEEEECTTSC---EEESSCHH
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce-----ecCCCeEEEEecCCe---EEECCCHH
Confidence 4689998877665 55568889999987 89999999987664332221 223456666654321 11223333
Q ss_pred HHHh-hchhhccCC-ccEEEecC----------cchh---HHHHHHHhCCceEEEcCC
Q 042709 90 KLMT-EDPQADTEC-TACVIADI----------SVGW---ALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 90 ~~~~-~~~~~~~~~-pD~vi~D~----------~~~~---~~~~A~~lgiP~v~~~~~ 132 (398)
..+. .+...+ .. ||+||+-. ++++ |..-|..+|||.+.|+..
T Consensus 80 DCV~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 80 DCVHLAITGVL-PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp HHHHHHTTTTS-SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred HHHHHHHHHhc-CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 3322 233333 34 99999743 2222 233344679999998853
No 55
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=93.86 E-value=0.25 Score=42.35 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=65.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKL 91 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
.|||+.-=-+. +---+..|+++|.+.| +|+++.+.....-..... +....+++.......- ......+..-
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-----T~~~pl~~~~~~~~~~--~~v~GTPaDC 72 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-----TFTEPLKMRKIDTDFY--TVIDGTPADC 72 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-----CCSSCEEEEEEETTEE--EETTCCHHHH
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-----CCCCCceeEEeeccce--eecCCChHHH
Confidence 67777655443 3344788999999999 599998877654332221 2223456555532110 0012333333
Q ss_pred Hh-hchhhccCC-ccEEEe----------cCcch---hHHHHHHHhCCceEEEcC
Q 042709 92 MT-EDPQADTEC-TACVIA----------DISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 92 ~~-~~~~~~~~~-pD~vi~----------D~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
+. .+...+.+. ||+||+ |.+++ +|+.-|..+|||.+.++.
T Consensus 73 V~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 73 VHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 22 233334566 999998 44443 566777788999999884
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=93.38 E-value=0.61 Score=41.95 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=67.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchHHHHHhhcccccCCCCCe-EEEEcCCCCCCCCCCCCCH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHAKIIASMQGKAENSSSQI-MLVSIPDGLDLQADEREDP 88 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (398)
|||+++...+.|++.-...+.+.|+++ |.+|++++.+.+.+.+... +.+ ++..++... .....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~---------p~i~~v~~~~~~~-----~~~~~ 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM---------PEVNEAIPMPLGH-----GALEI 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC---------TTEEEEEEC------------CH
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CccCEEEEecCCc-----cccch
Confidence 689999999999999999999999997 9999999999887765433 345 455553210 11122
Q ss_pred HHHHhhchhhccCC-ccEEEecCcc-hhHHHHHHHhCCceEE
Q 042709 89 HKLMTEDPQADTEC-TACVIADISV-GWALEVAEAIGIARAA 128 (398)
Q Consensus 89 ~~~~~~~~~~~~~~-pD~vi~D~~~-~~~~~~A~~lgiP~v~ 128 (398)
.. ...+...++.. +|++| |... .....++...|+|...
T Consensus 67 ~~-~~~l~~~l~~~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 GE-RRKLGHSLREKRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp HH-HHHHHHHTTTTTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred HH-HHHHHHHHHhcCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 22 22333344566 99998 4333 3566778888999843
No 57
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=91.35 E-value=1 Score=38.38 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=64.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCC-CCCCCCCCHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLD-LQADEREDPHK 90 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 90 (398)
||||+.-=-+. |---+..|+++|.+.| +|+++.|.....-..... +....+++..++.+-. ....-...+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~~~~~~~v~GTPaD 73 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI-----TIHVPLWMKKVFISERVVAYSTTGTPAD 73 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-----CCSSCCCEEECCCSSSEEEEEESSCHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCCCCceEEECCcHHH
Confidence 46776655443 3444889999999988 899999987654433222 2223456666543200 00102233333
Q ss_pred HHh-hchhhccCC-ccEEEec----------Ccch---hHHHHHHHhCCceEEEcC
Q 042709 91 LMT-EDPQADTEC-TACVIAD----------ISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 91 ~~~-~~~~~~~~~-pD~vi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
-+. .+...+ .. ||+||+- .+++ +|+.-|..+|||.+.++.
T Consensus 74 CV~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 74 CVKLAYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 322 222222 34 9999873 3322 456667788999999875
No 58
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=91.29 E-value=0.099 Score=48.77 Aligned_cols=82 Identities=15% Similarity=0.027 Sum_probs=53.2
Q ss_pred cceecccCccc---ccCCCCcceEEecC---Cc-chHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCCCCC
Q 042709 270 GKIVEWAPQEN---DLGHPSIAWFLSHC---GW-NSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGI 342 (398)
Q Consensus 270 ~~v~~~vpq~~---lL~~~~~~~~ItHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 342 (398)
+.+.+++|+.+ +++.+++ ||.-. |. .++.||+++|+|+|+ -..+ ....+++. ..|+.++.
T Consensus 297 v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~----- 363 (413)
T 2x0d_A 297 LNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ----- 363 (413)
T ss_dssp EEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-----
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-----
Confidence 34557776554 5667777 76432 43 467999999999998 2221 22334442 46877754
Q ss_pred cCHHHHHHHHHHHhcCHHHHHH
Q 042709 343 ITRQEIQINVKALLKNDGIKGN 364 (398)
Q Consensus 343 ~~~~~l~~ai~~~l~~~~~~~~ 364 (398)
-++++|.++|.++++|++.+++
T Consensus 364 ~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp CSHHHHHHHHHHHHHHTC----
T ss_pred CCHHHHHHHHHHHHcCHHHHHH
Confidence 4899999999999998866555
No 59
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=91.19 E-value=0.56 Score=40.74 Aligned_cols=113 Identities=16% Similarity=0.054 Sum_probs=65.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKL 91 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
||||+.-=-+. +---+..|+++|.+.| +|+++.|.....-+.... +....+++..++.+-.....-...+...
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si-----Tl~~pl~~~~~~~~~~~~~~v~GTPaDC 73 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-----TLHKPLRMYEVDLCGFRAIATSGTPSDT 73 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-----CCSSCBCEEEEECSSSEEEEESSCHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCCCceEEECCcHHHH
Confidence 46776655443 3344889999999998 999999987654432221 2223455555533100011123344433
Q ss_pred HhhchhhccCC-ccEEEec-----------Ccch---hHHHHHHHhCCceEEEcCC
Q 042709 92 MTEDPQADTEC-TACVIAD-----------ISVG---WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 92 ~~~~~~~~~~~-pD~vi~D-----------~~~~---~~~~~A~~lgiP~v~~~~~ 132 (398)
+..-...+ .. ||+||+- .+++ +|..-|..+|||.|.|+..
T Consensus 74 V~lal~~l-~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 74 VYLATFGL-GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHHHHHHH-TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHhcC-CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 33222223 45 9999973 2222 4566677889999999864
No 60
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=91.16 E-value=1 Score=38.28 Aligned_cols=111 Identities=16% Similarity=0.111 Sum_probs=65.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCC----CCCCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLD----LQADERED 87 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 87 (398)
||||+.-=-+. |---+..|+++|.+.| +|+++.|.....-+.... +....+++..++.+.+ ....-...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~~~~~~~~~~v~GT 73 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI-----TIAHPVRAYPHPSPLHAPHFPAYRVRGT 73 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC-----CCSSCBEEEECCCCTTSCCCCEEEEESC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCcCCCCCceEEEcCc
Confidence 46776655443 3344889999999988 899999987654332221 3334677777754311 00111233
Q ss_pred HHHHHhhchhhccCC-ccEEEec----------Ccch---hHHHHHHHhCCceEEEcC
Q 042709 88 PHKLMTEDPQADTEC-TACVIAD----------ISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 88 ~~~~~~~~~~~~~~~-pD~vi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
+..-+..-.. + .. ||+||+- .+++ +|..-|..+|||.+.++.
T Consensus 74 PaDCV~lal~-l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 74 PADCVALGLH-L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHHHHH-H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHc-C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 3332221111 3 34 9999873 3322 456667788999999875
No 61
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.85 E-value=0.53 Score=42.65 Aligned_cols=105 Identities=14% Similarity=0.043 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchHHHHHhhcccccCCCCCeE-EEEcCCCCCCCCCCC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHAKIIASMQGKAENSSSQIM-LVSIPDGLDLQADER 85 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (398)
++.+|||++-..+.|++.-+..+.+.|+++ +.+|++++.+.+.+.++.. +.+. ++.++..- ..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~---------p~vd~vi~~~~~~-----~~ 71 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN---------PNIDELIVVDKKG-----RH 71 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC---------TTCSEEEEECCSS-----HH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CCccEEEEeCccc-----cc
Confidence 457999999999999999999999999998 8999999999988777543 3453 55554210 00
Q ss_pred CCHHHHHhhchhhccCC-c-cEEEecCcchhHHHHHHHhCCceEE
Q 042709 86 EDPHKLMTEDPQADTEC-T-ACVIADISVGWALEVAEAIGIARAA 128 (398)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-p-D~vi~D~~~~~~~~~A~~lgiP~v~ 128 (398)
..+..+. .+...++.. + |++|.=....-...++...|+|...
T Consensus 72 ~~~~~~~-~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 NSISGLN-EVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHHHH-HHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccHHHHH-HHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0111222 122223444 7 9998655555567788889999754
No 62
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=90.82 E-value=0.48 Score=36.42 Aligned_cols=45 Identities=9% Similarity=0.019 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHH
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAK 53 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 53 (398)
|++.+|++.+.++.+|-....-++..|..+|++|++.+.....+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 667899999999999999999999999999999998876444333
No 63
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.85 E-value=0.43 Score=46.11 Aligned_cols=70 Identities=11% Similarity=0.154 Sum_probs=44.5
Q ss_pred ccCCCCcceEEec---CCc-chHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCC-C----CCcCHHHHHHH
Q 042709 281 DLGHPSIAWFLSH---CGW-NSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDE-N----GIITRQEIQIN 351 (398)
Q Consensus 281 lL~~~~~~~~ItH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~-~----~~~~~~~l~~a 351 (398)
+++.+++ ||.- =|+ .+++||+++|+|.|+- |.......+.+. .-|....... + ...+.+.|.++
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s----~~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACA----STGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEEC----SCTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEc----CCCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHH
Confidence 5666777 7653 233 4889999999999985 445556666552 4555443211 0 11356889999
Q ss_pred HHHHhc
Q 042709 352 VKALLK 357 (398)
Q Consensus 352 i~~~l~ 357 (398)
|+++++
T Consensus 471 i~ral~ 476 (536)
T 3vue_A 471 LKRAIK 476 (536)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988774
No 64
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=88.59 E-value=0.21 Score=46.51 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=31.2
Q ss_pred CCCEEEEEcCC-Cc----cCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVIPFP-AL----GHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~~~~-~~----GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.+|||+++... .. |=......|++.|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 47999977753 11 333568999999999999999999864
No 65
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.51 E-value=2.1 Score=35.03 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-----hHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC-
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI-----HAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE- 84 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (398)
+-.|++++.++.|=..-.+++|.+.+.+|++|.|+..-.. +..+.+.. ++.+.....++.-....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~~~~~~ 98 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTWETQNR 98 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCCCGGGH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcccccccCCCCc
Confidence 4568888998999999999999999999999999965442 12222221 48888887765422100
Q ss_pred CCCH---HHHHhhchhhccCC-ccEEEecCcch
Q 042709 85 REDP---HKLMTEDPQADTEC-TACVIADISVG 113 (398)
Q Consensus 85 ~~~~---~~~~~~~~~~~~~~-pD~vi~D~~~~ 113 (398)
..+. ...+....+.+.+. +|+||.|....
T Consensus 99 ~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EADTAACMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 0001 11222233333556 99999998854
No 66
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=87.86 E-value=1.6 Score=37.28 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=63.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCC-CCHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADER-EDPHK 90 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 90 (398)
||||+.-=-+. |---+..|+++|++.| +|+++.|.....-+.... +....+++..+... ...-. ..+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai-----Tl~~Pl~~~~~~~~---~~~v~~GTPaD 71 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL-----TLESSLRTFTFDNG---DIAVQMGTPTD 71 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-----CCSSCCEEEECTTS---CEEEETCCHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc-----CCCCCeEEEEeCCC---CeEECCCCHHH
Confidence 67887766554 4455888999999886 999999987654433222 22234666555211 11122 33433
Q ss_pred HHh-hchhhccCC-ccEEEec----------Ccch---hHHHHHHHhCCceEEEcC
Q 042709 91 LMT-EDPQADTEC-TACVIAD----------ISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 91 ~~~-~~~~~~~~~-pD~vi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
.+. .+...+ .. ||+||+- .+++ +|+.-|..+|||.+.++.
T Consensus 72 CV~lal~~ll-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 72 CVYLGVNALM-RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHHHHHHTTS-SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHHHHHhhcc-CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 332 233333 34 9999973 3333 234444567999999875
No 67
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=85.71 E-value=1.3 Score=36.58 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=39.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
+++||++.-.++.|-+. ...|.+.|.++|++|.++.++.-...+...
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 45789998888877666 899999999999999999998877776554
No 68
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=83.45 E-value=1.2 Score=36.83 Aligned_cols=48 Identities=19% Similarity=0.158 Sum_probs=38.1
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
.++++||++...++.+-+. ...|.+.|.++| +|.++.++.-...+...
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 3557899999999987666 899999999999 99999998876655443
No 69
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=83.26 E-value=4.3 Score=36.24 Aligned_cols=105 Identities=10% Similarity=0.010 Sum_probs=56.6
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC-c-------cchHHHHHhhcccccCCCCCeEEEEcCCCC
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT-E-------FIHAKIIASMQGKAENSSSQIMLVSIPDGL 78 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~-~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 78 (398)
.-|.+|||+|+. --+-...+.++|.++||+|..+.+ + .......+. ++.+...+. +
T Consensus 18 ~~~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~----------gIpv~~~~~-~ 81 (329)
T 2bw0_A 18 LYFQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD----------GVPVFKYSR-W 81 (329)
T ss_dssp ---CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH----------TCCEEECSC-C
T ss_pred ccCCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc----------CCCEEecCc-c
Confidence 346679999982 223334467899999999987665 2 222223333 566655432 1
Q ss_pred CCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCcH
Q 042709 79 DLQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 134 (398)
.. ......++. +.++.. ||++|+=.+.. -...+-......++-+.++..
T Consensus 82 ~~---~~~~~~~~~----~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLL 132 (329)
T 2bw0_A 82 RA---KGQALPDVV----AKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLL 132 (329)
T ss_dssp EE---TTEECHHHH----HHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCT
T ss_pred cc---cccccHHHH----HHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcC
Confidence 10 000011222 223455 99999876643 444555555566777776653
No 70
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=82.76 E-value=4.6 Score=39.84 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=43.6
Q ss_pred cccCcc---------cccCCCCcceEEecC---Cc-chHHHHHhcCCceecccCccchhhHHHhhccc------eeeEEE
Q 042709 274 EWAPQE---------NDLGHPSIAWFLSHC---GW-NSTMEGLSMGVPFLCWPSFADQHHNRNYICDV------WKIGVQ 334 (398)
Q Consensus 274 ~~vpq~---------~lL~~~~~~~~ItHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~------~g~g~~ 334 (398)
.|++.. .+++.+++ ||.-. |+ .+.+||+++|+|+|+--. ......+.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~----gG~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV----SGFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT----BHHHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC----CChhhhhhccccccCCCCceEE
Confidence 777664 36777787 76543 44 489999999999999543 3333333220 034665
Q ss_pred ecCCCCCCcCHHHHHHHHHHHh
Q 042709 335 LLPDENGIITRQEIQINVKALL 356 (398)
Q Consensus 335 l~~~~~~~~~~~~l~~ai~~~l 356 (398)
+... ...+.+++.++|.+.|
T Consensus 573 V~~r--d~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVDR--RFKAPDESVEQLVDYM 592 (725)
T ss_dssp EECC--SSSCHHHHHHHHHHHH
T ss_pred EeCC--CCCCHHHHHHHHHHHH
Confidence 5321 2345555555555544
No 71
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.34 E-value=8.5 Score=34.20 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+||.|+-.++.| +-++|+.|.++||+|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4799999999877 446999999999999987653
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=81.99 E-value=11 Score=30.53 Aligned_cols=40 Identities=20% Similarity=0.407 Sum_probs=31.7
Q ss_pred CEEE-EE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 12 PHVL-VI-PFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 12 ~~il-~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
||++ |. +-++.|=..-...||..|+++|++|.++-.....
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM 42 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 3455 44 2378899999999999999999999999876443
No 73
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=81.63 E-value=2.1 Score=38.05 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH-G-IDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~~ 49 (398)
|++|+|+++..+.. +++++.|++. | ++|..+....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 78899999866554 4799999986 7 8888876543
No 74
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=81.59 E-value=12 Score=34.27 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc-chHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF-IHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADERED 87 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
|+++||+++..+.. .+.+++++++.|++|+++..+. ......-. . .++.++ ..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~a----------d-~~~~~~---------~~d 59 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPNAHKPCLNLA----------D-EISYMD---------ISN 59 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSSCCHHHHHHC----------S-EEEECC---------TTC
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCCCCCcchhhC----------C-eEEEec---------CCC
Confidence 67789999977653 3679999999999999997643 33332211 1 222221 112
Q ss_pred HHHHHhhchhhccCC-ccEEEe---cCcchhHHHHHHHhCCc
Q 042709 88 PHKLMTEDPQADTEC-TACVIA---DISVGWALEVAEAIGIA 125 (398)
Q Consensus 88 ~~~~~~~~~~~~~~~-pD~vi~---D~~~~~~~~~A~~lgiP 125 (398)
.. .+.+..+.. +|+|+. |........+++.+|+|
T Consensus 60 ~~----~l~~~~~~~~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 60 PD----EVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp HH----HHHHHTTTSCCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred HH----HHHHHHHHcCCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 22 233333455 999996 33333556777889985
No 75
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=81.54 E-value=2 Score=35.16 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=38.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCccchHHHHHh
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~~~ 57 (398)
|||++...++.|-+. ...|.+.|.++ |++|.++.++.-...+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 588888888866655 99999999999 9999999999887777644
No 76
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.53 E-value=1.3 Score=34.49 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 67789999854 4433 68899999999999999874
No 77
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=81.34 E-value=1.7 Score=35.74 Aligned_cols=45 Identities=16% Similarity=0.034 Sum_probs=37.4
Q ss_pred CCCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 9 CRQPHVLVIPFPALGHVA-PLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
++++||++.-.++ +..+ -.+.|.+.|.++|++|.++.++.-...+
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 4568999998888 5666 7999999999999999999998765444
No 78
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=81.00 E-value=2.2 Score=33.74 Aligned_cols=43 Identities=21% Similarity=0.256 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
++.+|++.+.++..|-....-++..|..+|++|++.......+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e 59 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPE 59 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4689999999999999999999999999999999987654333
No 79
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=80.98 E-value=25 Score=29.86 Aligned_cols=119 Identities=14% Similarity=0.067 Sum_probs=66.6
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeC------cc--chHHHHHhhcccccCCCCCeEEEEcCCCCCC
Q 042709 11 QPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNT------EF--IHAKIIASMQGKAENSSSQIMLVSIPDGLDL 80 (398)
Q Consensus 11 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~------~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
+|+.+|++. ...|=..-.+.|++.|+++|++|.++=+ +. ....+.+... .....+.+.+.....+
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g-----~~~~~~~~~~~~p~sP 99 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG-----VTQLAGLARYPQPMAP 99 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC-----CCEEEEEEECSSSSCH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC-----CCCCCCCeeECCCCCh
Confidence 466665554 3668899999999999999999999863 11 1112222210 0001222222221110
Q ss_pred ------CCCCCCCHHHHHhhchhhccCCccEEEecCcc----------hhHHHHHHHhCCceEEEcCCcHH
Q 042709 81 ------QADEREDPHKLMTEDPQADTECTACVIADISV----------GWALEVAEAIGIARAAFVPFGPG 135 (398)
Q Consensus 81 ------~~~~~~~~~~~~~~~~~~~~~~pD~vi~D~~~----------~~~~~~A~~lgiP~v~~~~~~~~ 135 (398)
......+...+.+.+.+. +...|++|+|... .....+|+.++.|++.+......
T Consensus 100 ~~aa~~~~~~~~~~~~i~~~~~~l-~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~g 169 (251)
T 3fgn_A 100 AAAAEHAGMALPARDQIVRLIADL-DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLG 169 (251)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHTT-CCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSSTT
T ss_pred HHHHHHcCCCCCCHHHHHHHHHHH-HhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCCc
Confidence 000012233333333222 2239999998742 23568999999999998877543
No 80
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=80.89 E-value=3.4 Score=33.59 Aligned_cols=44 Identities=16% Similarity=0.106 Sum_probs=38.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
+||++...++.|-+ =...|.+.|.++|++|.++.++.-...+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 58999999887744 679999999999999999999988777765
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=80.49 E-value=1.9 Score=34.54 Aligned_cols=43 Identities=9% Similarity=0.065 Sum_probs=35.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKII 55 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 55 (398)
+||++.-.++.|=+ -...|.+.|.++|++|.++.++.-...+.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 68998888886655 48999999999999999999988766553
No 82
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=80.13 E-value=1.8 Score=35.80 Aligned_cols=43 Identities=12% Similarity=0.015 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCccchH
Q 042709 9 CRQPHVLVIPFPALGHVAP-LMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
++++||++.-.++ +..+- ...|.+.|.++|++|.++.++.-..
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQS 46 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC----
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHH
Confidence 4568999888887 55665 8999999999999999999987653
No 83
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=79.53 E-value=3.5 Score=34.08 Aligned_cols=44 Identities=11% Similarity=0.020 Sum_probs=38.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
+.+|++.+.++..|-....-++..|..+|++|.+++..-..+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999998876444443
No 84
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=79.35 E-value=3 Score=38.88 Aligned_cols=92 Identities=17% Similarity=0.197 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHK 90 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
+..|+++..++.|=..-...||..|+++|++|.++..+.+......+.... ....++.+...+ ...++..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~--~~~~gvpv~~~~--------~~~dp~~ 169 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQL--LDRYHIEVFGNP--------QEKDAIK 169 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHH--HGGGTCEEECCT--------TCCCHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHH--HHhcCCcEEecC--------CCCCHHH
Confidence 345667777899999999999999999999999999876644321111000 001255554332 1223433
Q ss_pred HHhhchhhccCC-ccEEEecCcc
Q 042709 91 LMTEDPQADTEC-TACVIADISV 112 (398)
Q Consensus 91 ~~~~~~~~~~~~-pD~vi~D~~~ 112 (398)
......+..+.. +|+||.|...
T Consensus 170 i~~~al~~a~~~~~DvVIIDTaG 192 (443)
T 3dm5_A 170 LAKEGVDYFKSKGVDIIIVDTAG 192 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEEECCC
Confidence 333333333445 9999999663
No 85
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=78.97 E-value=4.7 Score=30.94 Aligned_cols=46 Identities=15% Similarity=0.184 Sum_probs=34.4
Q ss_pred CEEE-EEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 12 PHVL-VIPFPAL-GHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 12 ~~il-~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
||+| ++..|-. -.+.-.+-++..|.++||+|++.+++.-...++-+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 4555 4445644 44455788899999999999999999888777654
No 86
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.58 E-value=2.6 Score=37.78 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
|+.|||+++-.++.| ..+|..|++.||+|+++......+.+.+.
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 556899999888777 45789999999999999875444445444
No 87
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=76.29 E-value=12 Score=33.08 Aligned_cols=98 Identities=6% Similarity=0.000 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch--------------HHHHHhhcccccCCCCCeEEEEc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH--------------AKIIASMQGKAENSSSQIMLVSI 74 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------------~~v~~~~~~~~~~~~~~~~~~~~ 74 (398)
|++|||+|+..|..+ +..-++|.++||+|..+.+.... ....+. ++.+..
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~----------gIpv~~- 68 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEH----------NVPVYQ- 68 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHT----------TCCEEC-
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHc----------CCCEEc-
Confidence 678999999876432 34567888899999877663221 112222 455432
Q ss_pred CCCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCcH
Q 042709 75 PDGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 134 (398)
+..+ . + .++ .+.+++. ||++|+=.+.. -...+-......++-+.++..
T Consensus 69 ~~~~-----~--~-~~~----~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlL 118 (318)
T 3q0i_A 69 PENF-----K--S-DES----KQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSIL 118 (318)
T ss_dssp CSCS-----C--S-HHH----HHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSST
T ss_pred cCcC-----C--C-HHH----HHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCccC
Confidence 1111 1 1 122 2333455 99999876643 344444444555777776653
No 88
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=76.07 E-value=4.5 Score=34.68 Aligned_cols=40 Identities=10% Similarity=0.014 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++.+|++.+.++..|-....-++..|..+|++|++.+..-
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 3679999999999999999999999999999999887543
No 89
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=75.29 E-value=7.6 Score=35.91 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPH 89 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
+++|++++...- .+ | -+.++.++.|++|+++.+...... ... ..--.++.++ ...+..
T Consensus 4 ~~k~l~Il~~~~-~~--~--~i~~aa~~lG~~vv~v~~~~~~~~--~~~-------~~~d~~~~~~--------~~~d~~ 61 (425)
T 3vot_A 4 RNKNLAIICQNK-HL--P--FIFEEAERLGLKVTFFYNSAEDFP--GNL-------PAVERCVPLP--------LFEDEE 61 (425)
T ss_dssp CCCEEEEECCCT-TC--C--HHHHHHHHTTCEEEEEEETTSCCC--CSC-------TTEEEEEEEC--------TTTCHH
T ss_pred CCcEEEEECCCh-hH--H--HHHHHHHHCCCEEEEEECCCcccc--cCH-------hhccEEEecC--------CCCCHH
Confidence 357788876543 22 2 256788889999999866432110 000 0012344443 223344
Q ss_pred HHHhhchhhccCC-ccEEEe--cCcchhHHHHHHHhCCce
Q 042709 90 KLMTEDPQADTEC-TACVIA--DISVGWALEVAEAIGIAR 126 (398)
Q Consensus 90 ~~~~~~~~~~~~~-pD~vi~--D~~~~~~~~~A~~lgiP~ 126 (398)
.+.+.+.+..++. +|.|+. |.....+..+|+.+|+|.
T Consensus 62 ~~~~~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 62 AAMDVVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 4555554444455 998885 433446678899999994
No 90
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=74.76 E-value=1.8 Score=35.45 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
|+++||++...++.|=+. ...|.+.|.++|++|.++.++.-...+..
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 466899998888866664 78999999999999999999876665533
No 91
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=73.84 E-value=11 Score=35.59 Aligned_cols=104 Identities=10% Similarity=0.013 Sum_probs=66.4
Q ss_pred cccCcc---cccCCCCcceEEe---cCCcch-HHHHHhcC---CceecccCccchhhHHHhhccceeeEEEecCCCCCCc
Q 042709 274 EWAPQE---NDLGHPSIAWFLS---HCGWNS-TMEGLSMG---VPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGII 343 (398)
Q Consensus 274 ~~vpq~---~lL~~~~~~~~It---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 343 (398)
..+|+. .+++.+++ ||. .-|+|. ..|++++| .|+|+--+.+ .+..+.+ -|+.+++ .
T Consensus 358 g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP-----~ 423 (496)
T 3t5t_A 358 NDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP-----F 423 (496)
T ss_dssp ECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT-----T
T ss_pred CCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC-----C
Confidence 556653 45556777 654 468885 58999996 6665533322 2222211 3677744 5
Q ss_pred CHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 042709 344 TRQEIQINVKALLKND--GIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVL 396 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 396 (398)
+.+++.++|.++|+++ +-+++.+++.+... .-+...-.+.|++.|+..
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 8999999999999865 34555555555543 356677788888888653
No 92
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=73.57 E-value=5.7 Score=34.51 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=24.7
Q ss_pred ccCCCCEEEE-EcCCCccCHHHH--HHHHHHHHhCCCeEEEEe
Q 042709 7 LSCRQPHVLV-IPFPALGHVAPL--MKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 7 ~~m~~~~il~-~~~~~~GH~~p~--l~La~~L~~rGh~Vt~~~ 46 (398)
..|+.||||+ ...|-..-.+-. -...+.|.++||+|++.-
T Consensus 18 ~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 18 LYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 3477899994 455654444433 245778889999999863
No 93
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=73.12 E-value=6.6 Score=29.72 Aligned_cols=46 Identities=9% Similarity=-0.007 Sum_probs=33.8
Q ss_pred CCEEEEEcC-C--CccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 11 QPHVLVIPF-P--ALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 11 ~~~il~~~~-~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
.+|++|+.. + ........+.+|...++.||+|+++-+......+.+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGBH
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHhh
Confidence 356664444 4 456777888999999999999999888776655433
No 94
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=72.90 E-value=10 Score=36.45 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=29.1
Q ss_pred CCEEEEEcCC------CccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFP------ALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~------~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|||||++.- +.|=-...-+|.++|+++||+|++++|.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 6899999742 2232345678999999999999999964
No 95
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=72.67 E-value=15 Score=30.55 Aligned_cols=105 Identities=17% Similarity=0.084 Sum_probs=61.4
Q ss_pred CCEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHH
Q 042709 11 QPHVLVIPFP-ALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPH 89 (398)
Q Consensus 11 ~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
+..+.+++.+ +.|=..-.+.++..+..+|.+|.++.+..... -..... ..-++.+..+ ......
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~d~r-~~~~i~-----srlG~~~~~~---------~~~~~~ 75 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTR-SIRNIQ-----SRTGTSLPSV---------EVESAP 75 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCCGG-GCSSCC-----CCCCCSSCCE---------EESSTH
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEeccCch-HHHHHH-----HhcCCCcccc---------ccCCHH
Confidence 4456666555 99999999999999999999999997655332 111110 0012111111 111223
Q ss_pred HHHhhchhhccCC-ccEEEecCcchh-------HHHHHHHhCCceEEEcC
Q 042709 90 KLMTEDPQADTEC-TACVIADISVGW-------ALEVAEAIGIARAAFVP 131 (398)
Q Consensus 90 ~~~~~~~~~~~~~-pD~vi~D~~~~~-------~~~~A~~lgiP~v~~~~ 131 (398)
.+...+.+...+. +|+|+.|..... ...++. .|+|++.+-.
T Consensus 76 ~i~~~i~~~~~~~~~dvViIDEaQ~l~~~~ve~l~~L~~-~gi~Vil~Gl 124 (223)
T 2b8t_A 76 EILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAE-NGFVVIISGL 124 (223)
T ss_dssp HHHHHHHSTTSCTTCCEEEECSGGGSCTHHHHHHHHHHH-TTCEEEEECC
T ss_pred HHHHHHHHHhhCCCCCEEEEecCccCcHHHHHHHHHHHh-CCCeEEEEec
Confidence 3444444443456 999999988652 122233 4888887654
No 96
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=72.02 E-value=6.9 Score=32.45 Aligned_cols=45 Identities=7% Similarity=0.084 Sum_probs=38.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
++.+|++.+.++..|-....-++..|..+|++|++.+..-..+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 468999999999999999999999999999999999875444443
No 97
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=71.44 E-value=2.4 Score=35.00 Aligned_cols=49 Identities=27% Similarity=0.237 Sum_probs=37.6
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCccchHHHHHh
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAE-HGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~~ 57 (398)
.|+++||++...++.+ .+-...|.+.|.+ +|++|.++.++.-...+...
T Consensus 16 ~l~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 16 MERKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CCSSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred ccCCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 4567899999888866 4456999999999 89999999998877665443
No 98
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=71.36 E-value=14 Score=31.08 Aligned_cols=38 Identities=16% Similarity=0.349 Sum_probs=31.0
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++++.+.. ++.|=..-...||..|+++|++|.++-...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45554433 688999999999999999999999987654
No 99
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=71.21 E-value=22 Score=33.56 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=64.5
Q ss_pred ecccCccc---ccCCCCcceEEe---cCCcc-hHHHHHhcCC-----ceecccCccchhhHHHhhccceeeEEEecCCCC
Q 042709 273 VEWAPQEN---DLGHPSIAWFLS---HCGWN-STMEGLSMGV-----PFLCWPSFADQHHNRNYICDVWKIGVQLLPDEN 340 (398)
Q Consensus 273 ~~~vpq~~---lL~~~~~~~~It---HgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 340 (398)
.+.+++.+ +++.+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.+++
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~p--- 403 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVNP--- 403 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEECT---
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEECC---
Confidence 36667664 5666777 764 34666 7899999998 666543221 22222 23555643
Q ss_pred CCcCHHHHHHHHHHHhcCH-H-HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 042709 341 GIITRQEIQINVKALLKND-G-IKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVL 396 (398)
Q Consensus 341 ~~~~~~~l~~ai~~~l~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 396 (398)
.+.+++.++|.++|+++ . -+++.+++.+.+++ -+...-.+.|++.+++.
T Consensus 404 --~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 --YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp --TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred --CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 47899999999999853 3 33344444444332 35667778888877654
No 100
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=70.79 E-value=13 Score=30.30 Aligned_cols=35 Identities=9% Similarity=-0.049 Sum_probs=28.3
Q ss_pred cCC-ccEEEecCcchhHHHHHHHhCCceEEEcCCcHHHH
Q 042709 100 TEC-TACVIADISVGWALEVAEAIGIARAAFVPFGPGSL 137 (398)
Q Consensus 100 ~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 137 (398)
+.. .|+||.|.. ...+|+++|+|.+.+.++.....
T Consensus 139 ~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~ 174 (196)
T 2q5c_A 139 KTENIKIVVSGKT---VTDEAIKQGLYGETINSGEESLR 174 (196)
T ss_dssp HHTTCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHH
T ss_pred HHCCCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHH
Confidence 446 999999954 78999999999999888655433
No 101
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=69.11 E-value=5.1 Score=35.47 Aligned_cols=46 Identities=20% Similarity=0.196 Sum_probs=41.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchHHHHHh
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~ 57 (398)
||||++-..+.|++.-...+.+.|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 689999999999999999999999998 8999999999988877544
No 102
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=68.40 E-value=10 Score=27.38 Aligned_cols=39 Identities=8% Similarity=0.140 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+++||+++|..+.|--.-.-.+=+.+.++|.++.+-..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 666899999998777666666888888899987765543
No 103
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.37 E-value=6.7 Score=33.79 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++|+|++.- + |. -=..|++.|.++||+|+.++-.
T Consensus 1 M~~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5568888873 4 63 3457899999999999998753
No 104
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=66.74 E-value=9.9 Score=36.32 Aligned_cols=96 Identities=10% Similarity=-0.010 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch----HHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH----AKIIASMQGKAENSSSQIMLVSIPDGLDLQADER 85 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
.++||+++. .-.-.++|++.|.+-|-+|+.+.+.... +.+.+.... ++.+....-...
T Consensus 363 ~GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~v~~~ 424 (523)
T 3u7q_B 363 HGKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAA-------------SPYGKNATVYIG 424 (523)
T ss_dssp TTCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHT-------------SGGGTTCEEEES
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhh-------------ccCCCCcEEEEC
Confidence 478888873 3344578899999999999988765332 223222110 000000000023
Q ss_pred CCHHHHHhhchhhccCC-ccEEEecCcchhHHHHHHHh-------CCceEEEc
Q 042709 86 EDPHKLMTEDPQADTEC-TACVIADISVGWALEVAEAI-------GIARAAFV 130 (398)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~l-------giP~v~~~ 130 (398)
.|..++.+.+. +. ||++|.... +..+|+++ |||++.+.
T Consensus 425 ~D~~~l~~~i~----~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 425 KDLWHLRSLVF----TDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp CCHHHHHHHHH----HTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred CCHHHHHHHHH----hcCCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 34555444432 44 999999965 55677777 99998743
No 105
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=66.62 E-value=8.8 Score=33.54 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchHHHHHh
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE-FIHAKIIAS 57 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~v~~~ 57 (398)
+|||+++-.+..|. .+|..|.++||+|+++... ...+.+.+.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence 48999998776664 5789999999999998753 333344443
No 106
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=66.40 E-value=7.5 Score=30.05 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=27.1
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
...+++|+++-.+..| ..+++.|.++|++|+++...
T Consensus 16 ~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 3457899999654444 56789999999999998764
No 107
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=65.65 E-value=4.9 Score=36.11 Aligned_cols=44 Identities=18% Similarity=0.128 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchHHHHHh
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE-FIHAKIIAS 57 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~v~~~ 57 (398)
|++|||+++-.+..|. .+|..|.++||+|+++... ...+.+.+.
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 46 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDIDAQRIKEIQDR 46 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCCHHHHHHHHhc
Confidence 5668999998776663 4788899999999988653 333344443
No 108
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=64.69 E-value=13 Score=34.56 Aligned_cols=90 Identities=12% Similarity=0.185 Sum_probs=52.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHH
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLM 92 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
-|+++..++.|=..-...||..|+++|++|.+++.+.+........... ....++.+.... ...++....
T Consensus 99 vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~~a~eqL~~~--~~~~gv~~~~~~--------~~~dp~~i~ 168 (433)
T 3kl4_A 99 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQL--GNQIGVQVYGEP--------NNQNPIEIA 168 (433)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCHHHHHHHHHH--HHTTTCCEECCT--------TCSCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccchhHHHHHHHH--HHhcCCceeecc--------ccCCHHHHH
Confidence 3446666789999999999999999999999999775543322111000 001144443332 122333333
Q ss_pred hhchhhccCC-ccEEEecCcc
Q 042709 93 TEDPQADTEC-TACVIADISV 112 (398)
Q Consensus 93 ~~~~~~~~~~-pD~vi~D~~~ 112 (398)
....+..... +|+||.|...
T Consensus 169 ~~al~~a~~~~~DvvIIDTaG 189 (433)
T 3kl4_A 169 KKGVDIFVKNKMDIIIVDTAG 189 (433)
T ss_dssp HHHHHHTTTTTCSEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEECCC
Confidence 3222333445 9999999653
No 109
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=64.62 E-value=38 Score=32.23 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+||.|+-.++.| |-.+|+.|.++|++|+..=..
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~ 52 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDAN 52 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESC
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCC
Confidence 56899999999866 667999999999999986543
No 110
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=64.07 E-value=7 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 478998844 5443 35789999999999998753
No 111
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=63.89 E-value=8.2 Score=33.00 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=35.8
Q ss_pred cCCCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 8 SCRQPHVLVIPFP---ALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 8 ~m~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
.|..||.+|++.+ +.|-=.-.-+|+..|..||++|+..--..+.+
T Consensus 19 ~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 19 YFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp --CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred ccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 4678999999987 55666778889999999999999987766543
No 112
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=63.20 E-value=7.6 Score=34.32 Aligned_cols=35 Identities=3% Similarity=0.134 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
+|+|+++..+ ....+++++.++||+|.++.+....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~~ 36 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKVK 36 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGGH
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCCC
Confidence 5789998876 4678999999999999998876543
No 113
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=63.14 E-value=34 Score=28.53 Aligned_cols=105 Identities=8% Similarity=-0.115 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccch----HHHHHhhcccccCCCCCeEEEEcCC-CCCCC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIH----AKIIASMQGKAENSSSQIMLVSIPD-GLDLQ 81 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 81 (398)
.+++||+|+..++. + -+.++.++|.+. +++|..+.+..-. ....+. ++.+..++. .+
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~----------gIp~~~~~~~~~--- 83 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA----------GVDALHMDPAAY--- 83 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT----------TCEEEECCGGGS---
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc----------CCCEEEECcccc---
Confidence 34579999977663 2 366777788876 6888766654221 222322 688776532 11
Q ss_pred CCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 82 ADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
.+-..+-..+.+.+++. ||++|+=.+.. -...+-..+...++=+.++.
T Consensus 84 ----~~r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 84 ----PSRTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp ----SSHHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred ----cchhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 11112222333444555 99999987743 45555566666666665543
No 114
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.08 E-value=6 Score=34.38 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
||||+. ++.|.+= -.|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 677665 3445443 4578999999999999874
No 115
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=62.98 E-value=64 Score=28.68 Aligned_cols=102 Identities=9% Similarity=0.013 Sum_probs=59.4
Q ss_pred CCEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCC
Q 042709 11 QPHVLVIPFPALG--H--VAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADERE 86 (398)
Q Consensus 11 ~~~il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
+.-|++.|..+.. . ..-+.+|++.|.++|++|++++++.-.+..++..... +-....+. ...
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~------~~~~~~l~--------g~~ 250 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM------ETKPIVAT--------GKF 250 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC------SSCCEECT--------TCC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc------ccccEEee--------CCC
Confidence 3456666664322 2 3358999999999999999988776665544432100 00111111 223
Q ss_pred CHHHHHhhchhhccCCccEEEecCcchhHHHHHHHhCCceEEEcCCc
Q 042709 87 DPHKLMTEDPQADTECTACVIADISVGWALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 87 ~~~~~~~~~~~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~ 133 (398)
++.++...+.. -|++|+-- .+..-+|..+|+|+|.++...
T Consensus 251 sl~e~~ali~~-----a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 251 QLGPLAAAMNR-----CNLLITND--SGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp CHHHHHHHHHT-----CSEEEEES--SHHHHHHHTTTCCEEEECSSC
T ss_pred CHHHHHHHHHh-----CCEEEECC--CCHHHHHHhcCCCEEEEECCC
Confidence 34444333322 57777632 346677889999999987544
No 116
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=62.59 E-value=28 Score=32.77 Aligned_cols=91 Identities=13% Similarity=0.113 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchH----HHHHhhcccccCCCCCeEEEEcCCCCCCCCCCC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA----KIIASMQGKAENSSSQIMLVSIPDGLDLQADER 85 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
.++|++++..+. +. ..+++.|.+-|-+|+.+++..... .+.+. + +++...- ..
T Consensus 331 ~GKrv~i~~~~~--~~---~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~-----------l-----~~~~~i~--~d 387 (483)
T 3pdi_A 331 EGKRVLLYTGGV--KS---WSVVSALQDLGMKVVATGTKKSTEEDKARIREL-----------M-----GDDVKML--DE 387 (483)
T ss_dssp TTCEEEEECSSS--CH---HHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHH-----------S-----CSSCCBC--CS
T ss_pred cCCEEEEECCCc--hH---HHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHh-----------c-----CCCCEEE--eC
Confidence 478999876653 43 467778999999999987764322 22222 1 0100000 22
Q ss_pred CCHHHHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 86 EDPHKLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
.++.++.+.+ ++. ||++|... .+..+|+++|||++.+.
T Consensus 388 ~d~~el~~~i----~~~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 388 GNARVLLKTV----DEYQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp CSHHHHHHHH----HHTTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred CCHHHHHHHH----HhcCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 2444444333 344 99999974 47789999999998654
No 117
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=62.58 E-value=6.2 Score=31.76 Aligned_cols=44 Identities=9% Similarity=0.107 Sum_probs=35.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
+||++...++.|=+ =...+.+.|.++|++|.++.++.-...+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 47888888775555 679999999999999999999887665543
No 118
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=62.58 E-value=13 Score=32.84 Aligned_cols=40 Identities=25% Similarity=0.242 Sum_probs=32.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
|||+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 7999998888774 57889999999999999866 3566655
No 119
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=62.51 E-value=10 Score=33.51 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
.++||+++-.++.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 36899999888877 46789999999999999544455556555
No 120
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=62.45 E-value=14 Score=32.44 Aligned_cols=40 Identities=20% Similarity=0.226 Sum_probs=31.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
|||+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 7899999888884 46889999999999998866 4556554
No 121
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=62.30 E-value=18 Score=28.86 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=33.1
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+.+|+++||+++.+++.. ..-+....+.|.+.|++|+++++..
T Consensus 4 ~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 4 AKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp --CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456788999999887644 4556677888999999999999754
No 122
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=61.33 E-value=11 Score=31.56 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+++|++..-|+.|=.+-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 467888889999999999999999999999998887754
No 123
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=61.05 E-value=6.6 Score=35.56 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=27.1
Q ss_pred CcccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 1 METQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 1 ~~~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|.+.....|+..+|+++-.+-.| +.+|..|+++|++|+++--
T Consensus 1 m~~~~~~~m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 1 MANVNKTPGKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp ----------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCccCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 34445567878899999877555 7789999999999999854
No 124
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=60.71 E-value=4.7 Score=36.92 Aligned_cols=44 Identities=9% Similarity=0.038 Sum_probs=30.6
Q ss_pred ccccCCCCEEEEEcCCCccCHHHHH----HHHHHHHhCCCeEEEEeCc
Q 042709 5 VQLSCRQPHVLVIPFPALGHVAPLM----KLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 5 ~~~~m~~~~il~~~~~~~GH~~p~l----~La~~L~~rGh~Vt~~~~~ 48 (398)
-|..|+++||+++..+..+--...+ .++++|.+.||+|+.+...
T Consensus 16 ~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 16 FQGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 4788999999988887655544444 7788888899999998854
No 125
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=60.63 E-value=14 Score=31.19 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPAL----------GH-VAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~----------GH-~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|.++|||++..... |- ..=++.-...|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34478998877532 22 2447777889999999999999753
No 126
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=60.15 E-value=88 Score=27.36 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=56.7
Q ss_pred CEEEEEcCCCcc---CH--HHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCC---eEEEEcCCCCCCCCC
Q 042709 12 PHVLVIPFPALG---HV--APLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQ---IMLVSIPDGLDLQAD 83 (398)
Q Consensus 12 ~~il~~~~~~~G---H~--~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 83 (398)
..|++.|....+ .+ .-+.++++.|.++|++|.+++++.-.+...+.... .+. .....+.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~-----~~~~~~~~~~~l~-------- 247 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAA-----LNTEQQAWCRNLA-------- 247 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTT-----SCHHHHTTEEECT--------
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHh-----hhhccccceEecc--------
Confidence 456666654221 23 36899999999999999998777655443332100 000 0122221
Q ss_pred CCCCHHHHHhhchhhccCCccEEEecCcchhHHHHHHHhCCceEEEcCC
Q 042709 84 EREDPHKLMTEDPQADTECTACVIADISVGWALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~ 132 (398)
...++.++...+.. -|++|+-- .+..-+|..+|+|+|.++..
T Consensus 248 g~~sl~e~~ali~~-----a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 248 GETQLDQAVILIAA-----CKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp TTSCHHHHHHHHHT-----SSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred CcCCHHHHHHHHHh-----CCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 12233444433221 57777643 34566788899999987643
No 127
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=59.90 E-value=54 Score=26.97 Aligned_cols=102 Identities=7% Similarity=-0.055 Sum_probs=58.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCccc----hHHHHHhhcccccCCCCCeEEEEcCC-CCCCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGI--DVTFVNTEFI----HAKIIASMQGKAENSSSQIMLVSIPD-GLDLQADE 84 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 84 (398)
+||+|+..++.+ -+.++.++|.+.+| +|..+.+..- ..+.++. ++.+..++. .+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~----------gIp~~~~~~~~~------ 62 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH----------NVECKVIQRKEF------ 62 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH----------TCCEEECCGGGS------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc----------CCCEEEeCcccc------
Confidence 689988776532 36677788888888 7765554431 1223333 677665532 11
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
.+-..+-..+.+.+++. ||++|+=.+.. -...+-+.+...++-+.++.
T Consensus 63 -~~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 63 -PSKKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp -SSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred -cchhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 11112223333444555 99999877643 44555555555677666654
No 128
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=59.72 E-value=12 Score=35.05 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPH 89 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
.++|++++.- -.-.+++++.|.+-|.+|+.+.+....+...+. .. .....+|+.
T Consensus 312 ~Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~----------~~-----------~~v~~~D~~ 365 (458)
T 3pdi_B 312 SSARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS----------PL-----------PSVRVGDLE 365 (458)
T ss_dssp TTCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT----------TS-----------SCEEESHHH
T ss_pred CCCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC----------cc-----------CcEEeCCHH
Confidence 4688888543 245578899999999999988876532211111 00 000112333
Q ss_pred HHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 90 KLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 90 ~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
++ .+.+++. ||++|.... +..+|+++|||++.+.
T Consensus 366 ~l----e~~i~~~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DL----EHAARAGQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HH----HHHHHHHTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HH----HHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 32 2223344 999999855 7889999999998753
No 129
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=59.07 E-value=36 Score=29.95 Aligned_cols=97 Identities=11% Similarity=-0.015 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc--------------hHHHHHhhcccccCCCCCeEEEEcC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI--------------HAKIIASMQGKAENSSSQIMLVSIP 75 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~~ 75 (398)
++|||+|+..|..+ ....++|.+.||+|..+.+... .....+. ++.+.. +
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~----------gIpv~~-~ 65 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK----------GLPVFQ-P 65 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT----------TCCEEC-C
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc----------CCcEEe-c
Confidence 46899998876432 4445777788999986665421 1122222 455432 1
Q ss_pred CCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcc-hhHHHHHHHhCCceEEEcCCcH
Q 042709 76 DGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISV-GWALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~-~~~~~~A~~lgiP~v~~~~~~~ 134 (398)
+.+ . + ..+. +.+++. ||++|+=.+. .-...+-......++-+.++..
T Consensus 66 ~~~-----~--~-~~~~----~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLL 114 (314)
T 1fmt_A 66 VSL-----R--P-QENQ----QLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLL 114 (314)
T ss_dssp SCS-----C--S-HHHH----HHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSST
T ss_pred CCC-----C--C-HHHH----HHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcC
Confidence 111 1 1 1222 222344 9999987664 3455555666667777777653
No 130
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=58.86 E-value=6.4 Score=34.50 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=28.7
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+..| ++|.|+-.+..|+ .+|..|+++||+|+++...
T Consensus 10 ~~~~~~--~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 10 AKKIIV--KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp --CCCC--CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cccccC--CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 344444 6899998887776 5788999999999988764
No 131
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=58.13 E-value=15 Score=35.03 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPH 89 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
.++||+++. .-.-.++|++.|.+-|-+|+.+.+........+..... + ..+|.+....-....+..
T Consensus 359 ~Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~l-------l--~~~~~~~~~~v~~~~d~~ 424 (519)
T 1qgu_B 359 HGKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKM-------L--DASPYGRDSEVFINCDLW 424 (519)
T ss_dssp TTCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHH-------H--HHSTTCTTCEEEESCCHH
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHH-------H--HhcCCCCCCEEEECCCHH
Confidence 578888884 33456788999999999998776654433222110000 0 001100000000223444
Q ss_pred HHHhhchhhccCC-ccEEEecCcchhHHHHHHHh-------CCceEEE
Q 042709 90 KLMTEDPQADTEC-TACVIADISVGWALEVAEAI-------GIARAAF 129 (398)
Q Consensus 90 ~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~l-------giP~v~~ 129 (398)
++.+.+. +. ||++|.+.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~----~~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMF----TRQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHH----HHCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHh----hcCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 4443332 33 999999964 67888888 9999874
No 132
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=57.42 E-value=8.8 Score=34.96 Aligned_cols=38 Identities=8% Similarity=0.148 Sum_probs=29.3
Q ss_pred CEEEEEcC--C-CccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVLVIPF--P-ALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~~--~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
|||++++. | ..|--.-...|++.|+++ |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 68887742 3 345566688999999999 99999987554
No 133
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=57.07 E-value=44 Score=31.52 Aligned_cols=94 Identities=11% Similarity=0.056 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-hHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI-HAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDP 88 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
.++||+++..+. | .+.+++.|.+-|-+|+.++++.. .+..++... ....+... + ...++
T Consensus 347 ~GKrv~i~g~~~--~---~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~----~~~~~~~i--~---------~~~d~ 406 (492)
T 3u7q_A 347 EGKRVMLYIGGL--R---PRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMK----EMGDSTLL--Y---------DDVTG 406 (492)
T ss_dssp TTCEEEECBSSS--H---HHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHT----TSCTTCEE--E---------ESCBH
T ss_pred CCCEEEEECCCc--h---HHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHH----hCCCCcEE--E---------cCCCH
Confidence 468888865543 3 56688889999999999877642 323322210 00001000 0 12234
Q ss_pred HHHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 89 HKLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 89 ~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
.++.+.+ ++. ||++|... .+..+|+++|||++.+.
T Consensus 407 ~el~~~i----~~~~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 407 YEFEEFV----KRIKPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHH----HHHCCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred HHHHHHH----HhcCCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 4444333 233 99999974 47899999999999743
No 134
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=56.98 E-value=12 Score=28.68 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=35.3
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 13 HVL-VIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 13 ~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
+++ ++..+..-.+++.+.+|...++.|++|+++-+......+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 444 55556778899999999999999999999999877766554
No 135
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=56.01 E-value=8.7 Score=32.16 Aligned_cols=38 Identities=13% Similarity=0.019 Sum_probs=33.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|||+|..-++.|=..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888777889999999999999999999999987655
No 136
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=55.81 E-value=30 Score=32.05 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=34.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCccchH
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTEFIHA 52 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~ 52 (398)
.|+++..++.|=..-...||..|+++ |++|.++....+..
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 45577778999999999999999999 99999999876543
No 137
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=55.13 E-value=43 Score=27.48 Aligned_cols=102 Identities=5% Similarity=-0.095 Sum_probs=58.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccch----HHHHHhhcccccCCCCCeEEEEcCC-CCCCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIH----AKIIASMQGKAENSSSQIMLVSIPD-GLDLQADE 84 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 84 (398)
+||+++-.++.+ -+.++.++|.+. +|+|..+.+..-. .+..+. ++.+..++. .+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~----------gIp~~~~~~~~~------ 64 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE----------NVPAFVFSPKDY------ 64 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT----------TCCEEECCGGGS------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc----------CCCEEEeCcccc------
Confidence 688888776633 356677788877 7899877665322 222232 677665532 11
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
.+-..+-..+.+.+++. ||++|+=.+.. -...+-..+...++-+.++.
T Consensus 65 -~~~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 65 -PSKAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp -SSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred -cchhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 11222223333444555 99999887643 45556666666677666554
No 138
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=54.88 E-value=31 Score=32.04 Aligned_cols=36 Identities=14% Similarity=0.315 Sum_probs=30.3
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..+.++|+++-++++||.. |.-|++.|.+|++..-+
T Consensus 34 ~lkgK~IaVIGyGsQG~Aq-----AlNLRDSGv~V~Vglr~ 69 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQ-----GLNMRDSGLDISYALRK 69 (491)
T ss_dssp GGTTSEEEEESCSHHHHHH-----HHHHHHTTCEEEEEECH
T ss_pred HHcCCEEEEeCCChHhHHH-----HhHHHhcCCcEEEEeCC
Confidence 3467999999999999965 66789999999998753
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.64 E-value=9.2 Score=28.84 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++||+++-.+.. -..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~G~i-----G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAA-----GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHH-----HHHHHHHHHHCCCeEEEEECC
Confidence 368888865332 357899999999999998764
No 140
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=54.52 E-value=27 Score=26.67 Aligned_cols=95 Identities=12% Similarity=0.049 Sum_probs=56.1
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhh
Q 042709 15 LVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTE 94 (398)
Q Consensus 15 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (398)
++++.. ..+=.-++.+|+.|.+.|++ ++++......+++. |+....+..... +. ...+.. .
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~--i~AT~GTa~~L~~~----------Gi~v~~v~k~~e-gg-~~~~~~----~ 87 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFK--LFATEATSDWLNAN----------NVPATPVAWPSQ-EG-QNPSLS----S 87 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCE--EEEEHHHHHHHHHT----------TCCCEEECCGGG-C------CB----C
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCE--EEECchHHHHHHHc----------CCeEEEEEeccC-CC-cccccc----c
Confidence 444443 34667799999999999996 45566667777766 455555532211 10 000001 1
Q ss_pred chhhccCC-ccEEEecCcc--------hhHHHHHHHhCCceEE
Q 042709 95 DPQADTEC-TACVIADISV--------GWALEVAEAIGIARAA 128 (398)
Q Consensus 95 ~~~~~~~~-pD~vi~D~~~--------~~~~~~A~~lgiP~v~ 128 (398)
+.+.+++. .|+||.-.-- +.-...|-.+|||++.
T Consensus 88 i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 88 IRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 22333455 9999985432 2456778889999975
No 141
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=54.43 E-value=16 Score=26.37 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=30.3
Q ss_pred CEEEEEcC-C--CccCHHHHHHHHHHHHhC-CC-eEEEEeCccchHHH
Q 042709 12 PHVLVIPF-P--ALGHVAPLMKLATKIAEH-GI-DVTFVNTEFIHAKI 54 (398)
Q Consensus 12 ~~il~~~~-~--~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~v 54 (398)
+|++++-. + +.......+.+|..+.+. || +|+++-........
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 35554333 3 234566789999999999 99 99998887766544
No 142
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=54.41 E-value=23 Score=29.63 Aligned_cols=22 Identities=14% Similarity=0.215 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCeEEEEeCcc
Q 042709 28 LMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 28 ~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
=.++|++|+++|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999999999999998864
No 143
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=53.49 E-value=14 Score=28.83 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
..+++++..+. | +.|++++++.|.++|.+|+++ .....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 46788887765 4 999999999999999999999 65433
No 144
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=53.44 E-value=75 Score=29.89 Aligned_cols=33 Identities=15% Similarity=0.263 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.+||.|+-.++.| +-++|+.|.++|++|+..=.
T Consensus 22 ~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 22 VRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 4789999998766 33589999999999997643
No 145
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=53.32 E-value=26 Score=28.83 Aligned_cols=107 Identities=11% Similarity=-0.029 Sum_probs=57.0
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCccc----hHHHHHhhcccccCCCCCeEEEEcCC-CC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHG--IDVTFVNTEFI----HAKIIASMQGKAENSSSQIMLVSIPD-GL 78 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 78 (398)
+..|.++||+++..+. ||. +.+|.+++.+.+ ++|..+.+..- .++.++. |+.+..++. .+
T Consensus 2 ~~~m~~~ri~vl~SG~-gsn--l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~----------gIp~~~~~~~~~ 68 (209)
T 4ds3_A 2 PGSMKRNRVVIFISGG-GSN--MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA----------GIATQVFKRKDF 68 (209)
T ss_dssp ----CCEEEEEEESSC-CHH--HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT----------TCCEEECCGGGS
T ss_pred CCcCCCccEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc----------CCCEEEeCcccc
Confidence 3568889999888766 433 455666665543 78887776421 1123333 677766642 11
Q ss_pred CCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCC
Q 042709 79 DLQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~ 132 (398)
. +-..+-..+.+.+++. ||++|+=.+.. -...+-+.+.-.++=+.++
T Consensus 69 ~-------~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 69 A-------SKEAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp S-------SHHHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred C-------CHHHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 1 1112223333444455 99999887753 4445555555556655544
No 146
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=53.21 E-value=66 Score=27.19 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=53.9
Q ss_pred HHHHHHHHHhCCC--eEEEEeCc--cchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-
Q 042709 28 LMKLATKIAEHGI--DVTFVNTE--FIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC- 102 (398)
Q Consensus 28 ~l~La~~L~~rGh--~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 102 (398)
.+.-|.+|+++|- +|+.++-. ...+.+++... .+-+.+-....++.+.. ..+.......+.+..+..
T Consensus 42 Ale~A~~Lke~g~~~~V~av~~G~~~a~~~lr~ala----~GaD~vi~v~~d~~~~~----~~~~~~~a~~La~~i~~~~ 113 (252)
T 1efp_B 42 AVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALA----MGADRAILVVAADDVQQ----DIEPLAVAKILAAVARAEG 113 (252)
T ss_dssp HHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHH----HTCSEEEEEECCSSTTC----CCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEEEeCChhHHHHHHHHHh----cCCCEEEEEecChhhcc----cCCHHHHHHHHHHHHHhcC
Confidence 5666888888776 78766643 23333333311 01112222221222200 112333444444444445
Q ss_pred ccEEEecCcch------hHHHHHHHhCCceEEEcCC
Q 042709 103 TACVIADISVG------WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 103 pD~vi~D~~~~------~~~~~A~~lgiP~v~~~~~ 132 (398)
||+||+-.... .+..+|.++|+|.++..+.
T Consensus 114 ~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 114 TELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred CCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 99999987663 6899999999999986643
No 147
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=52.93 E-value=29 Score=29.14 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=28.7
Q ss_pred CEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPAL-----------GHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~-----------GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||||+..... -...=+....+.|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 68998876422 144567777888999999999999854
No 148
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=52.80 E-value=10 Score=34.39 Aligned_cols=29 Identities=38% Similarity=0.386 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFV 45 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 45 (398)
|||+|+-.+-.| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 789999776555 78899999999999997
No 149
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=52.71 E-value=16 Score=31.64 Aligned_cols=42 Identities=12% Similarity=0.175 Sum_probs=26.1
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.....|-+.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 4 ~~~~~~~~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 4 TCPNTVTKRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp --------CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCccCCCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 33444545677788776643 3457899999999999888754
No 150
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=52.56 E-value=46 Score=27.45 Aligned_cols=110 Identities=6% Similarity=-0.083 Sum_probs=58.7
Q ss_pred ccccCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCccchH---HHHHhhcccccCCCCCeEEEEcCCCCCC
Q 042709 5 VQLSCRQPHVLVIPFPALGHVAPLMKLATKIAE-HGIDVTFVNTEFIHA---KIIASMQGKAENSSSQIMLVSIPDGLDL 80 (398)
Q Consensus 5 ~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
+..++.++||+++..+..+-+ .+|.+++.+ .+++|..+.+..... +.++. ++.+...+..
T Consensus 6 ~~~~~~~~ri~vl~SG~gsnl---~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~----------gIp~~~~~~~--- 69 (215)
T 3da8_A 6 RVPPSAPARLVVLASGTGSLL---RSLLDAAVGDYPARVVAVGVDRECRAAEIAAEA----------SVPVFTVRLA--- 69 (215)
T ss_dssp EECCCSSEEEEEEESSCCHHH---HHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHT----------TCCEEECCGG---
T ss_pred cCCCCCCcEEEEEEeCChHHH---HHHHHHHhccCCCeEEEEEeCCchHHHHHHHHc----------CCCEEEeCcc---
Confidence 344556789998887764433 334444432 346887776654322 22332 6766665311
Q ss_pred CCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 81 QADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
...+-..+-..+.+.+++. ||++|+=.+.. -...+-+.+...++=+.++.
T Consensus 70 ---~~~~r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 70 ---DHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp ---GSSSHHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred ---cccchhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 0111122333444445666 99999876643 44555555555566555543
No 151
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=52.06 E-value=16 Score=31.51 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=31.7
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|+.+|++.+.. ++.|=..-...||..|+++|++|.++-...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 33366665543 688999999999999999999999987655
No 152
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.99 E-value=24 Score=26.35 Aligned_cols=42 Identities=10% Similarity=-0.054 Sum_probs=29.7
Q ss_pred EEE-EEcCCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCccchHHH
Q 042709 13 HVL-VIPFPALG--HVAPLMKLATKIAEHGIDV-TFVNTEFIHAKI 54 (398)
Q Consensus 13 ~il-~~~~~~~G--H~~p~l~La~~L~~rGh~V-t~~~~~~~~~~v 54 (398)
|++ ++..+.+| .....+.+|..+.+.||+| .++-..+.....
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 455 44444444 4566788999999999999 888886665443
No 153
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=51.93 E-value=23 Score=29.23 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=25.4
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..|++|+|++.-. .|.+ =..|++.|.++||+|+.++-..
T Consensus 17 ~~l~~~~ilVtGa--tG~i--G~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 17 LYFQGMRVLVVGA--NGKV--ARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ----CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred cCcCCCeEEEECC--CChH--HHHHHHHHHhCCCeEEEEECCh
Confidence 3456788776643 3333 3578899999999999988643
No 154
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=51.90 E-value=21 Score=34.40 Aligned_cols=44 Identities=7% Similarity=-0.005 Sum_probs=38.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
+.+|++.+.++..|-....-++..|..+|++|++++..-..+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 67999999999999999999999999999999998876544444
No 155
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=51.90 E-value=13 Score=33.74 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALG-H---VAPLMKLATKI-AEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~~ 48 (398)
|+|+||+++..+-.+ | +.-...++++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 667899988776444 3 23468889999 9999999998643
No 156
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=51.81 E-value=11 Score=33.22 Aligned_cols=41 Identities=17% Similarity=0.046 Sum_probs=30.9
Q ss_pred CCCCE-EEEEcCCCccCHH--------------HHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPH-VLVIPFPALGHVA--------------PLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~-il~~~~~~~GH~~--------------p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.++.| |++...|+.=.+- .-.++|+++.++|++|+|++.+.
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34566 7777777755441 45688999999999999999864
No 157
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=51.76 E-value=8.6 Score=31.86 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=27.3
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+.|||.|+-.+..| ..+|+.|.++||+|+++..
T Consensus 20 ~m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hhcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 4556899999876555 4688999999999998544
No 158
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=51.67 E-value=58 Score=27.79 Aligned_cols=92 Identities=18% Similarity=0.146 Sum_probs=52.8
Q ss_pred HHHHHHHHHhC-CC--eEEEEeCc--cchHHHHHhhcccccCCCCCe-EEEEcCC-CCCCCCCCCCCHHHHHhhchhhcc
Q 042709 28 LMKLATKIAEH-GI--DVTFVNTE--FIHAKIIASMQGKAENSSSQI-MLVSIPD-GLDLQADEREDPHKLMTEDPQADT 100 (398)
Q Consensus 28 ~l~La~~L~~r-Gh--~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 100 (398)
.+..|.+|+++ |- +|+.++-. ...+.+.+... . |. +.+.+.+ .+ ...+.......+....+
T Consensus 42 ale~A~~Lke~~g~~~~V~av~~G~~~~~~~lr~ala----~---GaD~vi~v~d~~~-----~~~~~~~~a~~La~~i~ 109 (264)
T 1o97_C 42 SLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLA----K---GADRAVRVWDDAA-----EGSDAIVVGRILTEVIK 109 (264)
T ss_dssp HHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHH----T---TCSEEEEECCGGG-----TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEEeCchhHHHHHHHHHh----c---CCCEEEEEcCccc-----ccCCHHHHHHHHHHHHH
Confidence 46667888774 54 78776643 23333333321 0 22 1222221 11 12234444444444444
Q ss_pred CC-ccEEEecCcch------hHHHHHHHhCCceEEEcC
Q 042709 101 EC-TACVIADISVG------WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 101 ~~-pD~vi~D~~~~------~~~~~A~~lgiP~v~~~~ 131 (398)
.. ||+||+-.... .+..+|.++|+|.++..+
T Consensus 110 ~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 110 KEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred hcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 54 99999987763 689999999999998664
No 159
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=51.66 E-value=12 Score=33.26 Aligned_cols=44 Identities=20% Similarity=0.184 Sum_probs=31.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchHHHHHh
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE-FIHAKIIAS 57 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~v~~~ 57 (398)
-| .+||.|+-.+..| ..+|..|.+.||+|+++... ...+.+.+.
T Consensus 12 ~~-~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~~~~~~~l~~~ 56 (335)
T 1z82_A 12 HM-EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARRKEIVDLINVS 56 (335)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred cc-CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence 34 6899999888777 57899999999999998763 333444443
No 160
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=51.52 E-value=29 Score=29.24 Aligned_cols=46 Identities=13% Similarity=0.064 Sum_probs=28.2
Q ss_pred ccccccCCCCEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 3 TQVQLSCRQPHVLVIPF-----PALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 3 ~~~~~~m~~~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
++++..| .+||+|+-. ++ --..=+....+.|.+.|++|+++++...
T Consensus 16 ~~~~~~M-~kkV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG~~V~~~S~~~g 66 (242)
T 3l3b_A 16 TQGPGSM-ALNSAVILAGCGHMDG-SEIREAVLVMLELDRHNVNFKCFAPNKN 66 (242)
T ss_dssp ---------CEEEEECCCSSTTTS-CCHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred hcccccc-cCEEEEEEecCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 4444445 358888876 43 3444466667899999999999998643
No 161
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=51.44 E-value=30 Score=29.28 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=28.7
Q ss_pred CEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPAL----------GH-VAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~----------GH-~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+|||++-.... |- ..=++.-...|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 68998777632 22 4447777899999999999999743
No 162
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=51.37 E-value=10 Score=31.87 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|||.|+-.+..|- .||+.|+++||+|+.+..+
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 48999999998874 5899999999999987764
No 163
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=50.84 E-value=11 Score=34.00 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchHHHHHh
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE-FIHAKIIAS 57 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~v~~~ 57 (398)
.+|||.|+-.+..| ..+|..|++.||+|+++... ...+.+.+.
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~~~~~~i~~~ 71 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYESDHVDEMQAE 71 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 36899999888776 46899999999999999874 333344443
No 164
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=50.36 E-value=10 Score=33.19 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 35899999777666 46899999999999998653
No 165
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=50.21 E-value=18 Score=31.90 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=34.0
Q ss_pred ccccCC--CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 5 VQLSCR--QPHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 5 ~~~~m~--~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+.+.|+ +.||..+.. ++-|=.+-.+.||.+|+++|++|.++-...
T Consensus 39 ~~~~~~i~~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 39 LDEADKITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp --------CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred cCcccCCCCceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 334443 788886655 788999999999999999999999998764
No 166
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=50.01 E-value=16 Score=31.72 Aligned_cols=37 Identities=5% Similarity=0.126 Sum_probs=28.2
Q ss_pred CEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGH---VAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6899998874321 233467999999999999998874
No 167
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=49.88 E-value=41 Score=32.13 Aligned_cols=36 Identities=11% Similarity=0.097 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
.++|++++..+. + .+.+++.|.+-|-+|+.+++...
T Consensus 334 ~GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 334 QGKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TTCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEeccC
Confidence 578898876553 2 56677888899999999986554
No 168
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=49.74 E-value=21 Score=28.48 Aligned_cols=28 Identities=14% Similarity=0.049 Sum_probs=22.2
Q ss_pred ceEEecCCcchHHHH---HhcCCceecccCc
Q 042709 288 AWFLSHCGWNSTMEG---LSMGVPFLCWPSF 315 (398)
Q Consensus 288 ~~~ItHgG~~s~~ea---l~~GvP~v~~P~~ 315 (398)
.+++--||.||+.|+ +.+++|++++|.+
T Consensus 110 a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 110 VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 346778999986654 6799999999983
No 169
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=49.35 E-value=15 Score=32.17 Aligned_cols=31 Identities=16% Similarity=0.307 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+||.|+-.+..|. .+|+.|.++||+|+++.-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 6899999998884 689999999999999854
No 170
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=49.32 E-value=31 Score=27.43 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|.+|+|+++- +.|.+ =..+++.|.++||+|+.++-.
T Consensus 1 M~~~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 4456777653 33432 467889999999999988754
No 171
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=49.09 E-value=10 Score=35.71 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=28.2
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|++++|.|+-.+..| ..+|..|+++||+|+++..
T Consensus 2 ~m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 2 HMAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp -CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 4777899999887766 4578999999999998864
No 172
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=49.05 E-value=14 Score=33.31 Aligned_cols=35 Identities=9% Similarity=0.256 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++|+|.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 467899999876655 46789999999999988653
No 173
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.86 E-value=11 Score=28.48 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+.||+++-++..| ..+++.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4689998776544 478999999999999998754
No 174
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.74 E-value=20 Score=31.56 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.|+|.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 35799999888777 56889999999999987643
No 175
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=48.56 E-value=9.9 Score=33.18 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 57999998887774 6799999999999998653
No 176
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=48.50 E-value=29 Score=28.70 Aligned_cols=108 Identities=14% Similarity=-0.013 Sum_probs=60.7
Q ss_pred CEEEEEcCCCccCHHH----HHHHHHHHHhC-CCeEEEEeCccc-hHHHHHhhcccccCCCCCe-EEEEcCC-CCCCCCC
Q 042709 12 PHVLVIPFPALGHVAP----LMKLATKIAEH-GIDVTFVNTEFI-HAKIIASMQGKAENSSSQI-MLVSIPD-GLDLQAD 83 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 83 (398)
+.|+++.--..|.+.| .+.-|+.|++. |-+|+.++-... .+...+... . |. +.+.+.+ .+
T Consensus 4 ~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~----~---Gad~v~~v~~~~~----- 71 (217)
T 3ih5_A 4 NNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP----Y---GVDKLHVFDAEGL----- 71 (217)
T ss_dssp CCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG----G---TCSEEEEEECGGG-----
T ss_pred ccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh----c---CCCEEEEecCccc-----
Confidence 4688777655565554 57778999874 666665543322 222222210 0 21 1222221 11
Q ss_pred CCCCHHHHHhhchhhccCC-ccEEEecCcch---hHHHHHHHhCCceEEEcC
Q 042709 84 EREDPHKLMTEDPQADTEC-TACVIADISVG---WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~---~~~~~A~~lgiP~v~~~~ 131 (398)
...+...+...+.+..++. ||+|++-.... .+..+|.++|+|.+.-.+
T Consensus 72 ~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~ 123 (217)
T 3ih5_A 72 YPYTSLPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADCT 123 (217)
T ss_dssp SSCCHHHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCS
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceEE
Confidence 1222334444444444555 99999987765 578899999999986443
No 177
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=48.42 E-value=33 Score=26.04 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=30.6
Q ss_pred CCEEE-EEcCCCccCHHH--HHHHHHHHHhCCCeE-EEEeCccchHH
Q 042709 11 QPHVL-VIPFPALGHVAP--LMKLATKIAEHGIDV-TFVNTEFIHAK 53 (398)
Q Consensus 11 ~~~il-~~~~~~~GH~~p--~l~La~~L~~rGh~V-t~~~~~~~~~~ 53 (398)
.||++ ++..+.+|+-.. .+.+|+++.+.||+| .++-..+....
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~ 58 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYN 58 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHH
Confidence 46777 455566676555 567799999999999 77777665533
No 178
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=48.21 E-value=21 Score=27.95 Aligned_cols=40 Identities=15% Similarity=0.354 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVIPFPAL---GHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
...+|+++|.-+. --.++.-.|++.|.++|.+|.|..+|-
T Consensus 22 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 22 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp TCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4577888875311 246789999999999999999999874
No 179
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=47.79 E-value=43 Score=31.74 Aligned_cols=40 Identities=13% Similarity=0.221 Sum_probs=35.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
..|+++..++.|=..-+..||..|+++|++|.+++...+.
T Consensus 102 ~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 4677888899999999999999999999999999986543
No 180
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=47.68 E-value=22 Score=31.09 Aligned_cols=41 Identities=22% Similarity=0.075 Sum_probs=31.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc-chHHHHHh
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF-IHAKIIAS 57 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~-~~~~v~~~ 57 (398)
+|||+++-.++.|- .+|..|. +||+|+++.... ..+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 47999998888774 5688889 999999998764 34456555
No 181
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=47.34 E-value=22 Score=27.95 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPA---LGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+|+++|.-+ .--.++.-.|++.|.++|.+|.|..+|-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 56788887631 1246789999999999999999999874
No 182
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=46.91 E-value=31 Score=29.27 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=26.6
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.++|.+.++++++..+.| -=.++|++|+++|++|++...
T Consensus 20 ~~~m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 20 FQSMSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp ----CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred hhhccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 345666778888776543 346889999999999988744
No 183
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=46.47 E-value=22 Score=29.64 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCCC--------------ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPA--------------LGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~--------------~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|++++|++...|+ .| --=.++|++|+++|++|+++..+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg--~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSG--KMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCS--HHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCcc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 6677777766641 23 234688999999999999987644
No 184
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=46.24 E-value=43 Score=31.10 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
++.+||+|+-.+..| +++|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 356899999887655 3569999999999999765
No 185
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=46.16 E-value=22 Score=28.71 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=37.2
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhC
Q 042709 341 GIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVLRC 398 (398)
Q Consensus 341 ~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 398 (398)
..++++.|.+.+...+.. --+.+..+.+.|. +|.+...++.|++.+++.|+
T Consensus 122 ~~~sp~~L~~~L~~a~~e--~eeeS~~l~~~F~-----~~~~e~dv~~Fl~~y~~~R~ 172 (192)
T 2p22_C 122 KKYGDIALKKKLEQNTKK--LDEESSQLETTTR-----SIDSADDLDQFIKNYLDIRT 172 (192)
T ss_dssp HTSSHHHHHHHHHHHHHH--HHHHHHHHHHSCS-----CCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHH--HHHHHHHHHHHHc-----CCcccchHHHHHHHHHHHHH
Confidence 357888888888777753 3455666666663 46678999999999888763
No 186
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=45.81 E-value=91 Score=27.00 Aligned_cols=116 Identities=12% Similarity=0.079 Sum_probs=59.2
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCccchH----------------HHHHhhcccccCCCCC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTEFIHA----------------KIIASMQGKAENSSSQ 68 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~~~~----------------~v~~~~~~~~~~~~~~ 68 (398)
|...+.+||+++-.++.| -.+++.|+..|. +++++=...... +++..... .....+.
T Consensus 31 q~kL~~~~VlVvGaGGlG-----s~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~-L~~iNP~ 104 (292)
T 3h8v_A 31 YEKIRTFAVAIVGVGGVG-----SVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHT-LRNINPD 104 (292)
T ss_dssp -CGGGGCEEEEECCSHHH-----HHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHH-HHHHCTT
T ss_pred HHHHhCCeEEEECcCHHH-----HHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHH-HHhhCCC
Confidence 555677999999998766 346888888884 566654433211 11000000 0011234
Q ss_pred eEEEEcCCCCCCCCCCCCCHHHHHhhchh-hc-cCC-ccEEE--ecCcch--hHHHHHHHhCCceEEEcC
Q 042709 69 IMLVSIPDGLDLQADEREDPHKLMTEDPQ-AD-TEC-TACVI--ADISVG--WALEVAEAIGIARAAFVP 131 (398)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-pD~vi--~D~~~~--~~~~~A~~lgiP~v~~~~ 131 (398)
+++..++..+.. .+++..++..+.. .+ ... +|+|| +|.+.. ....++...++|++....
T Consensus 105 v~v~~~~~~l~~----~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv 170 (292)
T 3h8v_A 105 VLFEVHNYNITT----VENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGV 170 (292)
T ss_dssp SEEEEECCCTTS----HHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred cEEEEecccCCc----HHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeee
Confidence 555555433311 0112222211110 01 224 89998 455443 456788899999986443
No 187
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=45.77 E-value=81 Score=28.36 Aligned_cols=88 Identities=9% Similarity=0.129 Sum_probs=55.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKL 91 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
.-++++..|+.|-..=.+.++..+.++|..|.|++.+...+........ .....+.+. ...+..+.
T Consensus 75 ~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~~~a~~~g---~d~~~l~i~-----------~~~~~e~~ 140 (366)
T 1xp8_A 75 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALG---VNTDELLVS-----------QPDNGEQA 140 (366)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTT---CCGGGCEEE-----------CCSSHHHH
T ss_pred cEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhHHHHHHcC---CCHHHceee-----------cCCcHHHH
Confidence 4566788889999999999999999999999999998654433211100 000112211 11223344
Q ss_pred HhhchhhccCC-ccEEEecCcch
Q 042709 92 MTEDPQADTEC-TACVIADISVG 113 (398)
Q Consensus 92 ~~~~~~~~~~~-pD~vi~D~~~~ 113 (398)
...+....+.. +|+||.|....
T Consensus 141 l~~l~~l~~~~~~~lVVIDsl~~ 163 (366)
T 1xp8_A 141 LEIMELLVRSGAIDVVVVDSVAA 163 (366)
T ss_dssp HHHHHHHHTTTCCSEEEEECTTT
T ss_pred HHHHHHHHhcCCCCEEEEeChHH
Confidence 44443333556 99999998865
No 188
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=45.65 E-value=1.2e+02 Score=25.06 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=25.2
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
+.+.+.|.++++..+.| -=.++|+.|+++|++|++..
T Consensus 8 ~~~~~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -----CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 33346777777776543 34688999999999998876
No 189
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=45.46 E-value=21 Score=31.14 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=26.4
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
.|. .||.|+-.+..|. .+|+.|.++||+|+++.
T Consensus 3 ~Ms-~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 3 AMS-EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp -CC-CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CCC-CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 463 4799999988884 68999999999999864
No 190
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=45.37 E-value=12 Score=33.31 Aligned_cols=39 Identities=8% Similarity=0.111 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVA----PLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~----p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+||+++..+..+--. ....++++|.+.||+|+.+..
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 667899988764332222 456789999999999999865
No 191
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=45.37 E-value=9.4 Score=34.44 Aligned_cols=40 Identities=5% Similarity=0.021 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHV----APLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|.|+||+++..+..+-- .-...++++|.++||+|+.+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 56789998876533322 23477889999999999988753
No 192
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=45.05 E-value=17 Score=32.07 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=26.8
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+..+++|+|++.- +.|.+ =..|++.|.++||+|+.+.-
T Consensus 15 ~~~~~~~~vlVTG--asG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 15 VPRGSHMRILITG--GAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CSTTTCCEEEEET--TTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4455678877653 33433 35789999999999998875
No 193
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=44.82 E-value=24 Score=28.25 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=30.7
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPA---LGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+|+++|.-+ .--.++.-+|++.|.++|.+|.|..+|-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 56788887531 1246788999999999999999999874
No 194
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=44.80 E-value=43 Score=31.46 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=38.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcC--CCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIP--DGLDLQ 81 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 81 (398)
+|-+|++. ++=.-++.+|+.|.+.|.++. ++......+++. |+....+. .++|+.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~----------GI~v~~V~~vTgfPEi 66 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT----------GIPVTPVEQLTGFPEV 66 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT----------TCCCEEHHHHHSCCCC
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc----------CCceeeccccCCCchh
Confidence 44455544 345568899999999998775 777778788877 57766665 355554
No 195
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=44.77 E-value=24 Score=29.43 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=29.1
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 11 QPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 11 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
+|+.+|++. ...|=..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 445554444 477899999999999999999999985
No 196
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=44.69 E-value=17 Score=33.76 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=26.1
Q ss_pred ccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 3 TQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 3 ~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|+.+-++.|||.++-.+..| +.+|..|++ ||+|+.+...
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -------CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cccccccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 566666677999999877666 356778887 9999987653
No 197
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=44.30 E-value=20 Score=30.80 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+|+-.+..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 578888777666 36889999999999998653
No 198
>1j2m_A CPI-17, 17-kDa PKC-potentiated inhibitory protein of PP1; helix bundle, protein binding; NMR {Sus scrofa} SCOP: a.165.1.1 PDB: 2rlt_A* 1j2n_A 1k5o_A
Probab=44.28 E-value=14 Score=26.02 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=29.9
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhC
Q 042709 354 ALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVLRC 398 (398)
Q Consensus 354 ~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 398 (398)
.+|+=++=-+++.++++.+.++ .......|.+|+..++++||
T Consensus 58 eLLDl~sdeeR~~~LqelL~~C---~~ptE~FI~eLL~rlkgl~k 99 (99)
T 1j2m_A 58 ELLELESEEERSRKIQGLLKSC---TNPTENFVQELLVKLRGLHK 99 (99)
T ss_dssp HHHCCTTTTHHHHHHHHHHHTT---SCCCHHHHHHHHHHTTTTCC
T ss_pred HHhcCCcHHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhccC
Confidence 4443233356788889999886 44447888899999888875
No 199
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=44.26 E-value=57 Score=25.22 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+++||+++.+++. ...-+....+.|.+.|++|.++++..
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4689999998864 44556677889999999999999854
No 200
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=44.03 E-value=31 Score=27.61 Aligned_cols=40 Identities=18% Similarity=0.383 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMK-LATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~ 48 (398)
|..|||+++-.-..|+..-+.. +++.|.+.|++|.++.-.
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 4447888776655777665443 566777789998887653
No 201
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=43.92 E-value=25 Score=28.23 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=30.8
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPA---LGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+|+++|.-+ .--.++.-+|++.|.++|.+|.|..+|-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 56788887531 1246788999999999999999999874
No 202
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=43.79 E-value=25 Score=29.58 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=30.7
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 9 CRQPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 9 m~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
+++++.+|++. ...|=..-.+.|++.|+++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34567776655 466889999999999999999999985
No 203
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=43.46 E-value=14 Score=32.33 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeCccchHHHHH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEH-----G-IDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~~~~~~~v~~ 56 (398)
+|||+|+-.+..|. .+|..|.++ | |+|+++..+...+.+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 37999998887774 568888888 9 99999976433344444
No 204
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=43.34 E-value=78 Score=27.46 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=33.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
..|+++..++.|-..-...||..|+.+|++|.++..+.+.
T Consensus 99 ~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3455777779999999999999999999999999987543
No 205
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=43.18 E-value=19 Score=32.69 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+.++|+++-.+.. -+..|..|+++||+|+++-..
T Consensus 1 m~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 56689998876643 467899999999999998653
No 206
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=42.97 E-value=45 Score=29.11 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=31.0
Q ss_pred ccCCCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 7 LSCRQPHVLVIPFPALGH----VAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++| ++||+++..+..+- +.-...++++|.++||+|+.+.+..
T Consensus 10 ~~~-~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 10 PKR-FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GGG-GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred hhh-cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 345 57888887754332 3457889999999999999998644
No 207
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=42.83 E-value=13 Score=35.07 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=27.8
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.+-+-|.|++|.|+-.+..| ..||..|+++||+|+++..
T Consensus 8 ~~~~~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 8 HHHHHMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp -------CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred ccccccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 34567899999999888776 4689999999999998864
No 208
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=42.66 E-value=1e+02 Score=24.69 Aligned_cols=61 Identities=21% Similarity=0.396 Sum_probs=37.9
Q ss_pred CEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch-----HHHHHhhcccccCCCCCeEEEEcCCC
Q 042709 12 PHV-LVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH-----AKIIASMQGKAENSSSQIMLVSIPDG 77 (398)
Q Consensus 12 ~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~ 77 (398)
.|| +++..+...+-.....+++.|++.|++|.+++..... ..+.+.+ ....+-.|..+|++
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~-----n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAA-----NSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHH-----CSTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhc-----cCCCceEEEEecCc
Confidence 344 4555555556777889999999999999987754322 1222222 22346677777654
No 209
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=42.64 E-value=1.1e+02 Score=28.94 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=57.4
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEeCccc--hHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKI-AEHGIDVTFVNTEFI--HAKIIASMQGKAENSSSQIMLVSIPDGLDLQADE 84 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L-~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
...++|++++.-+ .-.+++++.| .+-|-+|..+++... .+...+.... .+-... .
T Consensus 300 ~l~Gkrv~i~gd~-----~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~------~~~~v~-----------~ 357 (511)
T 2xdq_B 300 NLTGKKAVVFGDN-----THAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAG------FCDEVL-----------I 357 (511)
T ss_dssp TTTTCEEEEEECH-----HHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTT------TSSEEE-----------E
T ss_pred hccCCEEEEEcCC-----hHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHh------cCCcEE-----------E
Confidence 3457888888432 3477899999 799999988776533 2223322210 010110 2
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
.+|..++.+.+ ++. ||++|.+. ....+|+++|||++.+.
T Consensus 358 ~~D~~el~~~i----~~~~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 358 TDDHTVVGDAI----ARVEPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp CCCHHHHHHHH----HHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred eCCHHHHHHHH----HhcCCCEEEecc---chHHHHHhcCCCeEecc
Confidence 22333333322 343 99999884 47888999999998754
No 210
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=42.58 E-value=13 Score=35.25 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+|.||+++-.+..| +.+|+.|.++|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 57899999887655 578999999999999998764
No 211
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.52 E-value=20 Score=27.30 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
..+++++..+. =+.|++++++.|.++|.+|+++ .....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 36788877765 4899999999999999999999 65443
No 212
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=42.50 E-value=29 Score=28.62 Aligned_cols=38 Identities=13% Similarity=0.297 Sum_probs=30.6
Q ss_pred CEEE-EEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVL-VIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il-~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++++ ++.. ++.|=..-...||..|+++|++|.++-...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 4555 4433 688999999999999999999999997654
No 213
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=42.44 E-value=11 Score=32.24 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=37.7
Q ss_pred CCCcceEEecCCcchHHHHHhc---CCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcC
Q 042709 284 HPSIAWFLSHCGWNSTMEGLSM---GVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKN 358 (398)
Q Consensus 284 ~~~~~~~ItHgG~~s~~eal~~---GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~ 358 (398)
.+++ +|+=||=||+.++++. ++|.+.++.. . +|.- ..+.++++.++++.++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl--------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL--------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc--------CcCCHHHHHHHHHHHHcC
Confidence 3455 9999999999999887 7787777521 1 1111 224678888999888865
No 214
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=42.32 E-value=23 Score=29.72 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=26.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+..++|.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 16 ~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3457999999776655 45799999999999998653
No 215
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=42.20 E-value=26 Score=30.64 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4899999776655 56899999999999988653
No 216
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=42.17 E-value=27 Score=30.82 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=32.9
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++|+|+.. ++.|=..-...||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45665554 789999999999999999999999999876
No 217
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=42.08 E-value=12 Score=25.09 Aligned_cols=49 Identities=18% Similarity=0.299 Sum_probs=32.5
Q ss_pred hcCCceecccCccchhhHHHh---hccceeeEEEecCCCCCCcCHHHHHHHHHHHhc
Q 042709 304 SMGVPFLCWPSFADQHHNRNY---ICDVWKIGVQLLPDENGIITRQEIQINVKALLK 357 (398)
Q Consensus 304 ~~GvP~v~~P~~~DQ~~na~~---~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~ 357 (398)
-.|+|+|++--.+.|.+.-.. ..++ |+...+- ..-++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh----ccCCHHHHHHHHHHHHH
Confidence 468999888777777654322 2232 5655553 35689999999988874
No 218
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=42.07 E-value=60 Score=27.54 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCC--eEEEEeCc--cchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-
Q 042709 28 LMKLATKIAEHGI--DVTFVNTE--FIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC- 102 (398)
Q Consensus 28 ~l~La~~L~~rGh--~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 102 (398)
.+..|.+|+++|- +|+.++-. ...+.+++... .+-+.+-....++.+. ...+.......+.+..+..
T Consensus 45 Ale~A~~Lke~g~~~~V~av~~G~~~a~~~lr~ala----~GaD~vi~v~~d~~~~----~~~~~~~~A~~La~~i~~~~ 116 (255)
T 1efv_B 45 AVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALA----MGADRGIHVEVPPAEA----ERLGPLQVARVLAKLAEKEK 116 (255)
T ss_dssp HHHHHHHHHHTTSCSEEEEEEEESTTHHHHHHHHHH----HTCSEEEEEECCHHHH----TTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEEEeCChhHHHHHHHHHh----cCCCEEEEEecChhhc----ccCCHHHHHHHHHHHHHhcC
Confidence 5667888888776 78776643 23333333311 0011222222111110 0112333333444444445
Q ss_pred ccEEEecCcch------hHHHHHHHhCCceEEEcCC
Q 042709 103 TACVIADISVG------WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 103 pD~vi~D~~~~------~~~~~A~~lgiP~v~~~~~ 132 (398)
||+||+-.... .+..+|.++|+|.++....
T Consensus 117 ~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 117 VDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 99999987763 6899999999999986643
No 219
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=42.05 E-value=32 Score=27.76 Aligned_cols=38 Identities=16% Similarity=0.055 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGH----VAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+++|.+++... +. ..-...|++.|+++|+.|++-+.+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 358898887654 33 344678889999999998887655
No 220
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=42.00 E-value=24 Score=28.82 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+++|.++-.+..| ..+|+.|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5889999876666 5678999999999998854
No 221
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=41.58 E-value=24 Score=30.41 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+.+||.++-.+..| ..+|+.|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 345789999776655 46899999999999998653
No 222
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=41.37 E-value=30 Score=30.62 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=52.3
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc--chHHHH---HhhcccccCCCCCeEEEEcCCCCCC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF--IHAKII---ASMQGKAENSSSQIMLVSIPDGLDL 80 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~--~~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
++.|.+++|+++-. .|.+ =..|++.|.++||+|+.++-.. ...... +.. ..++.++..+
T Consensus 5 ~~~M~~~~IlVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-------~~~v~~~~~D----- 68 (346)
T 3i6i_A 5 PVPSPKGRVLIAGA--TGFI--GQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-------DKGAIIVYGL----- 68 (346)
T ss_dssp ------CCEEEECT--TSHH--HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-------HTTCEEEECC-----
T ss_pred CCCCCCCeEEEECC--CcHH--HHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-------hCCcEEEEee-----
Confidence 45577788877654 3433 2468899999999999988654 222221 110 1256666542
Q ss_pred CCCCCCCHHHHHhhchhhccCC-ccEEEecCcch------hHHHHHHHhC-CceEEE
Q 042709 81 QADEREDPHKLMTEDPQADTEC-TACVIADISVG------WALEVAEAIG-IARAAF 129 (398)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~------~~~~~A~~lg-iP~v~~ 129 (398)
-.+...+...+ +.. +|+||.=.... -...+|+..| ++.+.+
T Consensus 69 ----l~d~~~l~~~~----~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 69 ----INEQEAMEKIL----KEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp ----TTCHHHHHHHH----HHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred ----cCCHHHHHHHH----hhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 22222232222 233 88888754431 2355666677 777764
No 223
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=41.16 E-value=63 Score=29.78 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|...|||++-. |. -.+.+++++++.|++|+.+.+..
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 43467887532 32 46789999999999999886544
No 224
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=41.15 E-value=52 Score=26.69 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=29.7
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+| .+||+|+.+++. ...-+....+.|.+.|++|++++..
T Consensus 5 ~~~m-~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 5 EQGM-SKRILVPVAHGS-EEMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp -----CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccc-CCeEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3445 358998888764 3556677789999999999999985
No 225
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=41.07 E-value=1.5e+02 Score=27.87 Aligned_cols=44 Identities=11% Similarity=-0.012 Sum_probs=36.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCccchHHH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTEFIHAKI 54 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v 54 (398)
+.=+++...|+.|=..=.+.+|..++.+ |..|.|++.+.....+
T Consensus 242 G~l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 242 GEVIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp TCEEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred CeEEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 3446677788999999999999999987 9999999998765543
No 226
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=40.99 E-value=42 Score=29.10 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|++|||+++... .......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 778999988553 356677899999999998874
No 227
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=40.98 E-value=24 Score=27.73 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPAL---GHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+|+++|.-+. -=.++.-.|++.|.++|.+|.|..+|-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 567888876311 246789999999999999999999864
No 228
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=40.95 E-value=21 Score=33.24 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||.++-.+..| ..+|..|+++||+|+.+...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 799999776555 57899999999999988754
No 229
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=40.90 E-value=20 Score=29.48 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+.++|+++-.+..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 34789999655444 3578889999999998764
No 230
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=40.87 E-value=20 Score=31.41 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 48 (398)
.|+|.|+-.+..| ..+|+.|+++|| +|+++...
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 5899999887766 478999999999 99988763
No 231
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=40.58 E-value=34 Score=30.56 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=33.7
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
++|+|++. ++.|=..-...||..|+++|++|.++.....
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 56665555 7899999999999999999999999998773
No 232
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=40.46 E-value=1.1e+02 Score=26.77 Aligned_cols=79 Identities=9% Similarity=-0.034 Sum_probs=49.8
Q ss_pred CCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch--hH
Q 042709 39 GIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISVG--WA 115 (398)
Q Consensus 39 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~--~~ 115 (398)
..+..+++++.+.-..... |++...+....+ + ..... .-+..+.+.+++. ..+|+++..+. .+
T Consensus 189 ~~~~~v~~H~af~Yfa~~y----------Gl~~~~~~~~~~-~--~eps~-~~l~~l~~~ik~~~v~~If~e~~~~~~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLAKEY----------GLKQVPIAGLSP-D--QEPSA-ASLAKLKTYAKEHNVKVIYFEEIASSKVA 254 (312)
T ss_dssp SCCEEEESSCTTHHHHHHT----------TCEEEECSSCCS-S--SCCCH-HHHHHHHHHTTSSCCCEEECSSCCCHHHH
T ss_pred CCCEEEEECCchHHHHHHC----------CCeEEEeeccCC-C--CCCCH-HHHHHHHHHHHHcCCCEEEEeCCCChHHH
Confidence 4455666777777666665 577665532111 1 11112 2334444454666 99999999887 57
Q ss_pred HHHHHHhCCceEEEcC
Q 042709 116 LEVAEAIGIARAAFVP 131 (398)
Q Consensus 116 ~~~A~~lgiP~v~~~~ 131 (398)
..+|+..|++.+.+.+
T Consensus 255 ~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 255 DTLASEIGAKTEVLNT 270 (312)
T ss_dssp HHHHHHTCCEEECCCC
T ss_pred HHHHHHhCCcEEEecc
Confidence 8899999999876543
No 233
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=40.43 E-value=65 Score=25.71 Aligned_cols=44 Identities=9% Similarity=0.109 Sum_probs=32.9
Q ss_pred ccccCC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 5 VQLSCR-QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 5 ~~~~m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.+..|. .+||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 16 ~~~~~~~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 16 LYKKAGLSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TTTTTTCCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred eehhhccCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 444454 4689999887654 3455677888999999999999865
No 234
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.39 E-value=20 Score=28.37 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=27.4
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 48 (398)
.+.++||+++-.+..| ..+++.|.++ ||+|+++...
T Consensus 36 ~~~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCCCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 3557899999655444 5678999999 9999998764
No 235
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=40.32 E-value=57 Score=28.17 Aligned_cols=78 Identities=13% Similarity=0.054 Sum_probs=48.1
Q ss_pred CCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch--hH
Q 042709 39 GIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISVG--WA 115 (398)
Q Consensus 39 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~--~~ 115 (398)
..+..+++++.+.-..... |++...+....+.. .... .-+..+.+.+++. ..+|+++..+. .+
T Consensus 178 ~~~~~v~~H~af~Yf~~~y----------Gl~~~~~~~~~~~~---eps~-~~l~~l~~~ik~~~v~~if~e~~~~~~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF----------GLKQLGISGISPEQ---EPSP-RQLKEIQDFVKEYNVKTIFAEDNVNPKIA 243 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT----------TCEEEEEECSCC------CCH-HHHHHHHHHHHHTTCCEEEECTTSCTHHH
T ss_pred CCCEEEEECCchHHHHHHC----------CCeEeeccccCCCC---CCCH-HHHHHHHHHHHHcCCCEEEEeCCCChHHH
Confidence 3455566777777777666 56666543221111 1112 2333444444556 99999998876 56
Q ss_pred HHHHHHhCCceEEEc
Q 042709 116 LEVAEAIGIARAAFV 130 (398)
Q Consensus 116 ~~~A~~lgiP~v~~~ 130 (398)
..+|+..|++++.+.
T Consensus 244 ~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 244 HAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHTTTCEEEECC
T ss_pred HHHHHHhCCeEEEec
Confidence 788999999998754
No 236
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=40.14 E-value=25 Score=30.52 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=26.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+||.|+-.+..|. .+|+.|.++||+|+++...
T Consensus 4 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 7999998887774 6789999999999988653
No 237
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=40.12 E-value=13 Score=30.64 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++-.+.. -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC
Confidence 56777765332 357899999999999998764
No 238
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=40.12 E-value=25 Score=31.27 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=35.4
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 11 QPHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 11 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
+++|+|++. ++.|=..-...||..|+++|++|.++.......
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 367776665 788999999999999999999999999985443
No 239
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=40.07 E-value=16 Score=31.93 Aligned_cols=33 Identities=27% Similarity=0.301 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+.++|.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 358999998776664 689999999999998754
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=40.04 E-value=19 Score=26.82 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..+|+++-.+..| ..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3578888654433 46789999999999987653
No 241
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=40.03 E-value=27 Score=30.71 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|||+|+-.+..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 578888777666 3568899999999999876
No 242
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=40.02 E-value=29 Score=30.43 Aligned_cols=41 Identities=24% Similarity=0.225 Sum_probs=28.2
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+...|++++|++.- +.|.+ =..|++.|.++||+|+.+.-.
T Consensus 4 ~~~~~~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTG--ANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCSSCTTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CcccCCCCCEEEEEC--CccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 345556678877653 33433 256789999999999987653
No 243
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=39.77 E-value=37 Score=28.65 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=26.2
Q ss_pred ccCCCCEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEeC
Q 042709 7 LSCRQPHVLVIPFPAL--GHVAPLMK-LATKIAEHGIDVTFVNT 47 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 47 (398)
..|.+|||+++..-.. |...-+.. +++.|.+.|++|.++--
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3445689997666433 55544444 56667778998888654
No 244
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=39.67 E-value=1.6e+02 Score=24.66 Aligned_cols=34 Identities=12% Similarity=-0.027 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++.++ |- -=.++++.|+++|++|+...-.
T Consensus 5 ~k~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGAS-SG--FGRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4566666654 32 2357899999999999887654
No 245
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.38 E-value=1.3e+02 Score=25.40 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 356666665532 346789999999999998753
No 246
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=38.91 E-value=1.1e+02 Score=29.10 Aligned_cols=94 Identities=10% Similarity=0.079 Sum_probs=55.8
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEeCccch--HHHHHhhcccccCCCCCeEEEEcCCCCCCCCCC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKI-AEHGIDVTFVNTEFIH--AKIIASMQGKAENSSSQIMLVSIPDGLDLQADE 84 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L-~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
...++||+++. .-.-.++|++.| .+-|-+|..+++.... +.+++..... .+++. .
T Consensus 277 ~l~GKrv~i~g-----d~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~----~~~v~-------------i 334 (525)
T 3aek_B 277 YLTGKRVFIFG-----DGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEY----GLEAL-------------I 334 (525)
T ss_dssp GGTTCEEEECS-----SHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHT----TCCCE-------------E
T ss_pred hcCCCEEEEEc-----CchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhc----CCcEE-------------E
Confidence 34578888763 234578899999 7999999887764322 2222211000 00111 1
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
.+|..++.+.+ ++. ||++|.+. ....+|+++|||++.+.
T Consensus 335 ~~D~~el~~~i----~~~~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 335 TDDYLEVEKAI----EAAAPELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp CSCHHHHHHHH----HHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred eCCHHHHHHHH----hhcCCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 22343333222 343 99999884 57888999999998743
No 247
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=38.80 E-value=1.6e+02 Score=24.17 Aligned_cols=39 Identities=10% Similarity=0.013 Sum_probs=30.9
Q ss_pred CCEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFP-ALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+-.|-+++.+ +.|=..-.+..+..+..+|.+|.++.+..
T Consensus 27 ~G~I~vitG~M~sGKTT~Llr~~~r~~~~g~kvli~kp~~ 66 (219)
T 3e2i_A 27 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAI 66 (219)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEC-
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 3456666665 77888889999999999999998887753
No 248
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=38.80 E-value=12 Score=31.70 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHG----IDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~ 47 (398)
|++|||.|+-.+..|. .+++.|.++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 5668999998876664 4688899999 89988754
No 249
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=38.63 E-value=28 Score=28.20 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++- +.|.+ =..|++.|.++||+|+.++-.
T Consensus 1 MkvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 4665553 33433 257899999999999988754
No 250
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=38.53 E-value=17 Score=32.70 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccCHHHHH----HHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLM----KLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l----~La~~L~~rGh~Vt~~~~~ 48 (398)
|+|+||+++..+..+--...+ .++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 678899988887655544444 7888888899999998853
No 251
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=38.21 E-value=24 Score=29.89 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|||.|+-.+..|. .+++.|.+.||+|+++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeCC
Confidence 5788887766664 578999999999998643
No 252
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=38.20 E-value=1.8e+02 Score=24.51 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=22.5
Q ss_pred CCCEEEEEcCCCccCHHH--HHHHHHHHHhCCCeEEEEe
Q 042709 10 RQPHVLVIPFPALGHVAP--LMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~ 46 (398)
++.+|+++.......+.. .-.+-+++.++|+++.++.
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 356777666654444333 3356667778899998853
No 253
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=38.20 E-value=24 Score=30.29 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=32.9
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 10 RQPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 10 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
+++++++++. |+.|=..-...||..|+++|.+|.++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3566665543 6889999999999999999999999876543
No 254
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=38.16 E-value=45 Score=27.47 Aligned_cols=37 Identities=14% Similarity=0.236 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGH----VAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+|.+++....+- ..-...|++.|+++|+.|+.-...
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 4688886655442 234678899999999999887765
No 255
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=37.86 E-value=18 Score=32.47 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEe
Q 042709 9 CRQPHVLVIPFPALG-H---VAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 9 m~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|+++||+++..+..+ | +.--..++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 888999988554333 3 2334568899999999999874
No 256
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=37.53 E-value=46 Score=25.06 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=26.9
Q ss_pred CEEEEEcCCCccCHHHH-HHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPL-MKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~-l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||+++-+-..|+.--+ -.+++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 57776655567876544 346777888999999887654
No 257
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=37.49 E-value=27 Score=30.04 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 6899998877774 5789999999999998654
No 258
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=37.49 E-value=1.5e+02 Score=23.20 Aligned_cols=98 Identities=10% Similarity=-0.040 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCccc------hHHHHHhhcccccCCCCCeEEEEcCCCC-CCCCCCCCCHHHHHhhchhhcc
Q 042709 28 LMKLATKIAEHGIDVTFVNTEFI------HAKIIASMQGKAENSSSQIMLVSIPDGL-DLQADEREDPHKLMTEDPQADT 100 (398)
Q Consensus 28 ~l~La~~L~~rGh~Vt~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 100 (398)
...+.+.|.++|+.+.++|.... ...+...+.. .-+..+-..+.. ........+...+...+ +.+.
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~------~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~-~~~~ 111 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII------DYFDFIYASNSELQPGKMEKPDKTIFDFTL-NALQ 111 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG------GGEEEEEECCTTSSTTCCCTTSHHHHHHHH-HHHT
T ss_pred HHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch------hheEEEEEccccccccCCCCcCHHHHHHHH-HHcC
Confidence 56888999999999999996543 2223333211 123433333221 11111222333232222 2222
Q ss_pred CC-ccEEEecCcchhHHHHHHHhCCceEEEcCC
Q 042709 101 EC-TACVIADISVGWALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 101 ~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~ 132 (398)
-. -++++++-....-...|+..|++++.+...
T Consensus 112 ~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~ 144 (189)
T 3ib6_A 112 IDKTEAVMVGNTFESDIIGANRAGIHAIWLQNP 144 (189)
T ss_dssp CCGGGEEEEESBTTTTHHHHHHTTCEEEEECCT
T ss_pred CCcccEEEECCCcHHHHHHHHHCCCeEEEECCc
Confidence 23 445555444345888999999999987653
No 259
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=37.35 E-value=21 Score=30.56 Aligned_cols=45 Identities=11% Similarity=0.078 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCccchHHH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATK--------IAEH-GIDVTFVNTEFIHAKI 54 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~v 54 (398)
++.+|++.+.++..|-....-++.. |..+ |++|++.+..-..+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 3678999999999999999999988 9999 9999998876544443
No 260
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=37.29 E-value=99 Score=28.53 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=47.2
Q ss_pred cccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCC
Q 042709 2 ETQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDL 80 (398)
Q Consensus 2 ~~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
|.|.+.+| +||||++-.++. -.+|++.|.+.+. ..+++.+ .+.... . .-....+
T Consensus 13 ~~~~~~p~-~m~ilvlG~ggr-----e~ala~~l~~s~~v~~v~~~p-gn~g~~-~-----------~~~~~~i------ 67 (442)
T 3lp8_A 13 EAQTQGPG-SMNVLVIGSGGR-----EHSMLHHIRKSTLLNKLFIAP-GREGMS-G-----------LADIIDI------ 67 (442)
T ss_dssp -------C-CEEEEEEECSHH-----HHHHHHHHTTCTTEEEEEEEE-CCGGGT-T-----------TSEECCC------
T ss_pred ecccCCCC-CCEEEEECCChH-----HHHHHHHHHhCCCCCEEEEEC-CChHHh-h-----------ccceeec------
Confidence 44555555 689999977754 4468999988863 4444443 222111 0 0111111
Q ss_pred CCCCCCCHHHHHhhchhhccCC-ccEEEecCcch---hHHHHHHHhCCceE
Q 042709 81 QADEREDPHKLMTEDPQADTEC-TACVIADISVG---WALEVAEAIGIARA 127 (398)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~---~~~~~A~~lgiP~v 127 (398)
...+...+.+.. +.. +|+|+...-.. ......+.+|+|++
T Consensus 68 ---~~~d~~~l~~~a----~~~~id~vv~g~E~~l~~~~~~~l~~~Gi~~~ 111 (442)
T 3lp8_A 68 ---DINSTIEVIQVC----KKEKIELVVIGPETPLMNGLSDALTEEGILVF 111 (442)
T ss_dssp ---CTTCHHHHHHHH----HHTTCCEEEECSHHHHHTTHHHHHHHTTCEEE
T ss_pred ---CcCCHHHHHHHH----HHhCCCEEEECCcHHHHHHHHHHHHhcCCcEe
Confidence 223333333322 344 99999865433 23445667899885
No 261
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=37.24 E-value=92 Score=23.14 Aligned_cols=59 Identities=5% Similarity=-0.052 Sum_probs=35.4
Q ss_pred cCCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 042709 305 MGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKNDGIKGNSLKLK 369 (398)
Q Consensus 305 ~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~ 369 (398)
..+|+|++--..|.... ....+ .|+--.+. ..++.++|.++|+.++....++...++++
T Consensus 74 ~~~pii~ls~~~~~~~~-~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~ 132 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMA-VQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSLR 132 (155)
T ss_dssp TTSCEEEEECGGGHHHH-HHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHH-HHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788877554443333 33334 36544443 45899999999999997554443333333
No 262
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=37.22 E-value=38 Score=24.30 Aligned_cols=33 Identities=9% Similarity=0.167 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTF 44 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 44 (398)
|||+++|..+.|+-.-.-.+-+.+.++|.++.+
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 579999998888886666777778888886554
No 263
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=37.12 E-value=85 Score=21.65 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
-+..+|++++.. | ......+..|.+.|++|..+..
T Consensus 54 ~~~~~ivvyC~~--g--~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 54 NDNETYYIICKA--G--GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp CTTSEEEEECSS--S--HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCcEEEEcCC--C--chHHHHHHHHHHCCCCEEEecc
Confidence 345678888843 3 3466778999999998776543
No 264
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=37.08 E-value=42 Score=33.17 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=23.6
Q ss_pred CcccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 1 METQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 1 ~~~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|.+++...|++++|++.- +.|-+ =..|++.|.++||+|+.+.-
T Consensus 1 m~~~~~~~~~~~~ilVTG--atG~I--G~~l~~~L~~~G~~V~~~~r 43 (699)
T 1z45_A 1 MTAQLQSESTSKIVLVTG--GAGYI--GSHTVVELIENGYDCVVADN 43 (699)
T ss_dssp ----------CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCcccccccCCCEEEEEC--CCCHH--HHHHHHHHHHCcCEEEEEEC
Confidence 455555556667777654 33332 35689999999999998864
No 265
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=37.02 E-value=1.7e+02 Score=23.84 Aligned_cols=102 Identities=10% Similarity=-0.060 Sum_probs=59.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchH----HHHHhhcccccCCCCCeEEEEcCC-CCCCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHA----KIIASMQGKAENSSSQIMLVSIPD-GLDLQADE 84 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 84 (398)
+||+++..+..+ -+-+|.+++.+. +|+|..+.+..-.. +..+. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~----------gIp~~~~~~~~~~----- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA----------GIATHTLIASAFD----- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT----------TCEEEECCGGGCS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc----------CCcEEEeCccccc-----
Confidence 478877776533 366677777766 58887776653222 23332 677776532 221
Q ss_pred CCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 85 REDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
+-..+-..+.+.+++. ||++|+=.+.. -...+-..+...++-+.++.
T Consensus 63 --~r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 63 --SREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp --SHHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred --chhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 1112223334444565 99999987743 45556666666777666654
No 266
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=37.01 E-value=35 Score=29.50 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++|+++- +.|.+= ..+++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 36666653 344442 46789999999999988764
No 267
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=37.01 E-value=40 Score=29.08 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
++|||.|+-.+..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 358999998777764 468889999999987654
No 268
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=36.55 E-value=36 Score=30.08 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=33.1
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
.+|+|++. ++-|=..-...||..|+++|++|.++.....
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 55665544 7899999999999999999999999988765
No 269
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=36.47 E-value=52 Score=23.95 Aligned_cols=41 Identities=7% Similarity=-0.066 Sum_probs=29.6
Q ss_pred EE-EEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 14 VL-VIPFPALGHV--APLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 14 il-~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
++ ++..+-+|+. .-.+.+|..+...||+|.++-..+.....
T Consensus 4 ~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~ 47 (119)
T 2d1p_B 4 IAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQL 47 (119)
T ss_dssp EEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHH
Confidence 44 4445555766 55678899999999999998887765444
No 270
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=36.44 E-value=59 Score=23.48 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 042709 10 RQPHVLVIPFPALGHVAP-LMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 46 (398)
+++||+++|..+.|.-.- ...|-+.+.++|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 457899999999999884 6778888889998865443
No 271
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=36.43 E-value=1e+02 Score=27.58 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=33.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
-++++-.++.|=..=++.++..+...|..|.|++++....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 3557777888999999999999999999999999876443
No 272
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=36.32 E-value=34 Score=29.44 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
+|||.|+-.+..|. .+++.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 37999998777774 46888999999998775
No 273
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=36.12 E-value=52 Score=28.88 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=24.1
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
-+.|++++|++.- +.|.+ -..|++.|.++||+|+.+.-
T Consensus 22 ~~~~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 22 HMEKDRKRILITG--GAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp -----CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCCEEEEEc--CccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3445667877653 33433 35788999999999998874
No 274
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=36.09 E-value=38 Score=28.49 Aligned_cols=94 Identities=11% Similarity=0.031 Sum_probs=46.1
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch--------HHHHHhhcccccCCCCCeEEEEcCCCCC
Q 042709 9 CRQPHVL-VIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH--------AKIIASMQGKAENSSSQIMLVSIPDGLD 79 (398)
Q Consensus 9 m~~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (398)
|++++|| +.+.|- =-..-+=+....++++|++|++++-.... .+..+........+.+...|..++++.-
T Consensus 1 ~~~~~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~lT~G~~g~~~~~~~R~~E~~~A~~~LGv~~~~~L~~~D~~~ 79 (242)
T 2ixd_A 1 MSGLHILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGL 79 (242)
T ss_dssp -CCCSEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCC
T ss_pred CCCccEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCeEEECCCCCCCC
Confidence 5566777 445553 22333445556777899998887643221 1111111000001112345666766432
Q ss_pred CCCCCCCCHHHHHhhchhhccCC-ccEEEec
Q 042709 80 LQADEREDPHKLMTEDPQADTEC-TACVIAD 109 (398)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D 109 (398)
.. ..+....+.+.++.. ||+|++-
T Consensus 80 ~~------~~~~~~~l~~~ir~~~PdvV~t~ 104 (242)
T 2ixd_A 80 YM------KEEYIREIVKVIRTYKPKLVFAP 104 (242)
T ss_dssp CC------CHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CC------hHHHHHHHHHHHHHcCCCEEEEC
Confidence 11 134445555555555 9999874
No 275
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=35.91 E-value=32 Score=27.92 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++- +.|.+ =..|+++|.++||+|+.++-.
T Consensus 1 MkilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 4655543 33433 357899999999999998754
No 276
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=35.78 E-value=31 Score=29.63 Aligned_cols=31 Identities=13% Similarity=0.292 Sum_probs=25.3
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+|+-. +..| ..+++.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 69999987 7666 4578899999999997754
No 277
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=35.76 E-value=35 Score=28.72 Aligned_cols=40 Identities=18% Similarity=0.251 Sum_probs=31.9
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 11 QPHVLVIP--FPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
+++++.+. -++.|=..-...||..|+++|++|.++-....
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 45555443 36889999999999999999999999976543
No 278
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.72 E-value=43 Score=27.77 Aligned_cols=36 Identities=3% Similarity=-0.129 Sum_probs=23.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|.+.|.++++..+.| -=.++++.|+++|++|+++.-
T Consensus 4 ~~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 4 SGEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp --CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred cCCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 333455556554432 346789999999999988764
No 279
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=35.71 E-value=40 Score=28.84 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|-+.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 444567777776543 3467899999999999887653
No 280
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=35.67 E-value=13 Score=33.49 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
||.|+-.+..| ..+|..|.++||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 89999888776 46789999999999998754
No 281
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=35.67 E-value=53 Score=27.09 Aligned_cols=42 Identities=12% Similarity=0.172 Sum_probs=29.6
Q ss_pred ccccCCCCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 5 VQLSCRQPHVLVIPFPALG----HVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 5 ~~~~m~~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..+.| .+|.+++....+ +..-...|++.|+++|+.|+.-+..
T Consensus 5 ~~~~m--~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 5 QRSRF--RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CCCSC--SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCC--CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 33444 468888654433 3446788999999999999887765
No 282
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=35.61 E-value=36 Score=28.94 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=33.5
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 10 RQPHVLVIPFP---ALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 10 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
++||.+|++.+ +.|-=.-.-+|+..|..||++||..--..+.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 46899999987 4455577789999999999999987665544
No 283
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=35.54 E-value=26 Score=31.71 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=32.1
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
++|+++.. ++.|=..-...||..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 67886665 6889999999999999999999999998
No 284
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=35.23 E-value=45 Score=28.26 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=23.6
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
...|++ |+++++..+.| -=.++++.|+++|++|+++.-
T Consensus 6 ~~~~~~-k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 6 HEASEC-PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp -----C-CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred hhccCC-CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 334544 45556655432 346789999999999998865
No 285
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=35.18 E-value=63 Score=25.16 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=38.2
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHh
Q 042709 9 CRQPHVL-VIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIAS 57 (398)
Q Consensus 9 m~~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 57 (398)
|.+.++. ++..+..--.++.+-+|..-+.-|++|+++-+......+++.
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K~ 51 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRDP 51 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBCG
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhccC
Confidence 4445555 444567778899999999999999999999998777776654
No 286
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=34.93 E-value=58 Score=29.22 Aligned_cols=37 Identities=5% Similarity=0.139 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+.+|.+... +.|-..-...|++.|.++| +|++.++..
T Consensus 40 ~~~iwih~~-s~G~~~~~~~L~~~L~~~~-~v~v~~~~~ 76 (374)
T 2xci_A 40 KGALWVHTA-SIGEFNTFLPILKELKREH-RILLTYFSP 76 (374)
T ss_dssp TTCEEEECS-SHHHHHHHHHHHHHHHHHS-CEEEEESCG
T ss_pred CCCEEEEcC-CHHHHHHHHHHHHHHHhcC-CEEEEEcCC
Confidence 456777665 4577889999999999999 888776543
No 287
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=34.78 E-value=37 Score=29.18 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 689998776655 46789999999999988653
No 288
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=34.69 E-value=53 Score=28.65 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++++|++.- +.|.+ =..|++.|.++||+|+.+.-.
T Consensus 1 m~~~~vlVtG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITG--IRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEEC--CCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 5567776653 33433 356889999999999988753
No 289
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=34.61 E-value=20 Score=33.75 Aligned_cols=29 Identities=28% Similarity=0.315 Sum_probs=23.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFV 45 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 45 (398)
+||+++-.+-.| |.-|..|+++||+|+++
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEE
Confidence 678888665444 66788999999999986
No 290
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=34.47 E-value=57 Score=27.61 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|||+++- + |.+= ..|++.|.++||+|+.++-..
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 7887774 4 5443 467899999999999988654
No 291
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.19 E-value=39 Score=25.35 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=0.0
Q ss_pred ccEEEecCcch--hHHHHHHHh-------CCceEEEcCCc
Q 042709 103 TACVIADISVG--WALEVAEAI-------GIARAAFVPFG 133 (398)
Q Consensus 103 pD~vi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 133 (398)
||+||.|...+ -|..+++.+ ++|++.++...
T Consensus 58 ~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 58 FDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 292
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=34.17 E-value=41 Score=24.23 Aligned_cols=37 Identities=11% Similarity=-0.026 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
+++||+++|..+.|--.-.-.+=+...++|.+|.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 5689998888776554444445555566788888755
No 293
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=34.14 E-value=1.6e+02 Score=24.04 Aligned_cols=94 Identities=13% Similarity=0.156 Sum_probs=52.2
Q ss_pred HHHHHHHHHhCCCeEEEEeCccchHHHHHh-hcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-ccE
Q 042709 28 LMKLATKIAEHGIDVTFVNTEFIHAKIIAS-MQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC-TAC 105 (398)
Q Consensus 28 ~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~ 105 (398)
...+.+.|.++|..+.+++.......+.+. +.. .-+.+.-..+.... ...++.-+...+.+. .-. -++
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl~------~~fd~i~~~~~~~~---~KP~p~~~~~a~~~l-g~~p~e~ 169 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAALELR------EFFTFCADASQLKN---SKPDPEIFLAACAGL-GVPPQAC 169 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTCG------GGCSEECCGGGCSS---CTTSTHHHHHHHHHH-TSCGGGE
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhhhhc------cccccccccccccC---CCCcHHHHHHHHHHc-CCChHHE
Confidence 567888999999999998876655444333 211 11233222222211 222233333333222 223 445
Q ss_pred EEecCcchhHHHHHHHhCCceEEEcCC
Q 042709 106 VIADISVGWALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 106 vi~D~~~~~~~~~A~~lgiP~v~~~~~ 132 (398)
|+.+-. ......|+..|+++|.+...
T Consensus 170 l~VgDs-~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 170 IGIEDA-QAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp EEEESS-HHHHHHHHHHTCEEEEESTT
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEECCC
Confidence 555433 46999999999999987653
No 294
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=34.05 E-value=30 Score=30.56 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+.+||.|+-.+..| .++|..|+++||+|+++...
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 556899999887766 46889999999999998764
No 295
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=34.02 E-value=47 Score=20.52 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042709 344 TRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFIS 391 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 391 (398)
.++++.+.-...|.|+.+++.-..=+..|.+. .|-+...|++.++
T Consensus 8 ~Re~li~~Av~FL~dp~V~~sp~~~K~~FL~s---KGLt~~EI~~Al~ 52 (54)
T 3ff5_A 8 FREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHHHHHHHHCTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCChhhhcCCHHHHHHHHHH---cCCCHHHHHHHHH
Confidence 34555555557888998887777767777765 8999999887764
No 296
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=34.02 E-value=1.2e+02 Score=26.93 Aligned_cols=38 Identities=16% Similarity=0.431 Sum_probs=30.0
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCc
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTE 48 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 48 (398)
|..++.+||+++-.++.| -.+++.|+..|. +++++-..
T Consensus 113 q~~L~~~~VlvvG~GglG-----s~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 113 QDKLKNAKVVILGCGGIG-----NHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHHHHTCEEEEECCSHHH-----HHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHhCCeEEEECCCHHH-----HHHHHHHHhCCCCeEEEECCC
Confidence 566678999999988877 478899999995 67777654
No 297
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=33.96 E-value=38 Score=30.51 Aligned_cols=34 Identities=15% Similarity=0.136 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+++|+++..+ .....+++++.+.|++|..+....
T Consensus 11 ~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 11 ATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 4899998543 235778999999999999887654
No 298
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=33.80 E-value=37 Score=28.69 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=30.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|.|..-++.|=..-...||..|+++|++|.++-..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 455655678899999999999999999999998654
No 299
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=33.73 E-value=51 Score=27.03 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|+++++.++.| -=.++|+.|+++|++|++..-.
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666665533 3468899999999999887653
No 300
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=33.68 E-value=1.4e+02 Score=27.51 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=53.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKL 91 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
..|+++..++.|-..-...||..|+.+|++|.++....+......+.... ....++.+.+...+ .++...
T Consensus 99 ~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r~aa~~qL~~~--~~~~gv~v~~~~~~--------~~p~~i 168 (425)
T 2ffh_A 99 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLL--GEKVGVPVLEVMDG--------ESPESI 168 (425)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSCHHHHHHHHHH--HHHHTCCEEECCTT--------CCHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccCchhHHHHHHh--cccCCccEEecCCC--------CCHHHH
Confidence 34556666788999999999999999999999999865543322110000 00014555544221 233333
Q ss_pred HhhchhhccCC-ccEEEecCc
Q 042709 92 MTEDPQADTEC-TACVIADIS 111 (398)
Q Consensus 92 ~~~~~~~~~~~-pD~vi~D~~ 111 (398)
.....+..+.. +|+||.|..
T Consensus 169 ~~~~l~~~~~~~~DvVIIDTa 189 (425)
T 2ffh_A 169 RRRVEEKARLEARDLILVDTA 189 (425)
T ss_dssp HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHCCCCEEEEcCC
Confidence 22222222334 999999965
No 301
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=33.60 E-value=73 Score=27.30 Aligned_cols=38 Identities=16% Similarity=0.102 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPAL-GHVA---PLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478998876532 2222 3467999999999999998765
No 302
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=33.54 E-value=82 Score=26.05 Aligned_cols=36 Identities=8% Similarity=0.124 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++++++ ++..+ |- -=.++++.|+++|++|+.+.-.
T Consensus 9 ~~~k~vl-ITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 9 LDGACAA-VTGAG-SG--IGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CTTCEEE-EETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEE-EECCC-cH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4445444 44433 32 3468899999999999988653
No 303
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=33.51 E-value=25 Score=33.13 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|.+|+|.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 556899999887666 46799999999999988643
No 304
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.48 E-value=1.1e+02 Score=28.48 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCC-CCeEEEEcCCCCCCCCCCCCCH
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSS-SQIMLVSIPDGLDLQADEREDP 88 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
.++|++++.-+ .-.++|++.|.+-|-+|+.+.+........+.........+ .+..+. ...+.
T Consensus 311 ~gkrv~i~~~~-----~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~-----------~~~d~ 374 (458)
T 1mio_B 311 QGKKVALLGDP-----DEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVK-----------VEGDF 374 (458)
T ss_dssp TTCEEEEEECH-----HHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEE-----------ESCBH
T ss_pred CCCEEEEEcCc-----hHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEE-----------ECCCH
Confidence 56788877653 45668889999999999987765433332221100000000 000110 12234
Q ss_pred HHHHhhchhhccCC-ccEEEecCcchhHHHHHHHhCCceEEEc
Q 042709 89 HKLMTEDPQADTEC-TACVIADISVGWALEVAEAIGIARAAFV 130 (398)
Q Consensus 89 ~~~~~~~~~~~~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 130 (398)
.++.+.+ ++. ||++|.+.. ...+|+++|||++.+.
T Consensus 375 ~~l~~~i----~~~~pDl~ig~~~---~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 375 FDVHQWI----KNEGVDLLISNTY---GKFIAREENIPFVRFG 410 (458)
T ss_dssp HHHHHHH----HHSCCSEEEESGG---GHHHHHHHTCCEEECS
T ss_pred HHHHHHH----HhcCCCEEEeCcc---hHHHHHHcCCCEEEee
Confidence 4433322 344 999998864 6888999999999753
No 305
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=33.38 E-value=23 Score=29.40 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=16.8
Q ss_pred HHHHHHHHhCC-CeEEEEeCc
Q 042709 29 MKLATKIAEHG-IDVTFVNTE 48 (398)
Q Consensus 29 l~La~~L~~rG-h~Vt~~~~~ 48 (398)
..+++.|.++| |+|+.++-.
T Consensus 37 ~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 37 RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp HHHHHHHTTCTTEEEEEEESS
T ss_pred HHHHHHHHhCCCceEEEEEcC
Confidence 57899999999 999988753
No 306
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=33.37 E-value=93 Score=28.63 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||+++.. | ...+.+++++.+.|++|+++.+..
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 56777642 3 256689999999999999987643
No 307
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=33.36 E-value=85 Score=24.78 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=25.0
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVL-VIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
.|++ ++...++ .-.=++.-.+.|.+.|++|+++++...
T Consensus 8 ~~~v~il~~~gF-e~~E~~~p~~~l~~ag~~V~~~s~~~~ 46 (177)
T 4hcj_A 8 NNILYVMSGQNF-QDEEYFESKKIFESAGYKTKVSSTFIG 46 (177)
T ss_dssp CEEEEECCSEEE-CHHHHHHHHHHHHHTTCEEEEEESSSE
T ss_pred CCEEEEECCCCc-cHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3444 4443333 233466677889999999999998653
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=33.23 E-value=11 Score=35.26 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|||+++-.+-.| ..||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5799999887666 46899999999999998654
No 309
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=33.17 E-value=36 Score=27.51 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=23.7
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIP-FPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++- .+..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4788875 44444 36789999999999988653
No 310
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=33.09 E-value=19 Score=31.46 Aligned_cols=34 Identities=12% Similarity=-0.017 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4688888887655 688899999999999997754
No 311
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=32.93 E-value=1.9e+02 Score=25.09 Aligned_cols=109 Identities=10% Similarity=0.095 Sum_probs=58.9
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCc--cchHHHHHhhcccccCCCCCeEEEEcCCCCC
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTE--FIHAKIIASMQGKAENSSSQIMLVSIPDGLD 79 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (398)
++....+++||+++..+. || -+.+|..+-.+- +.+|..+.+. ......++. |+.+..+|....
T Consensus 98 ~l~~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~ 164 (302)
T 3o1l_A 98 RITDSAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH----------DIPYYHVPVDPK 164 (302)
T ss_dssp EEEETTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT----------TCCEEECCCCSS
T ss_pred eecccCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc----------CCCEEEcCCCcC
Confidence 334444578999888766 65 355555554432 4688777663 233333332 788887753221
Q ss_pred CCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCC
Q 042709 80 LQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~ 132 (398)
.. ..+-..+.+.+++. ||+||.=.+.- -...+-+.+.-.++=+.++
T Consensus 165 ----~r---~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 ----DK---EPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ----CC---HHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ----CH---HHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 11 11222233333455 99999887753 4445555555555554443
No 312
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=32.84 E-value=42 Score=32.07 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=27.8
Q ss_pred ccCCCCEEEEEcC-C------CccCHHHHHH---HHHHHHhCCCeEEEEeCc
Q 042709 7 LSCRQPHVLVIPF-P------ALGHVAPLMK---LATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 7 ~~m~~~~il~~~~-~------~~GH~~p~l~---La~~L~~rGh~Vt~~~~~ 48 (398)
-.|++.++.++.. | ..||....+. |++.|+.+|++|.+++.-
T Consensus 20 ~~~~~~~~~i~~p~pypng~lHiGH~r~~v~~D~laR~lr~~G~~V~~~~g~ 71 (536)
T 4dlp_A 20 GSMSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGT 71 (536)
T ss_dssp ----CCEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CcCCCCCEEEeCCCCCCCCCcCcchhHHHHHHHHHHHHHHhcCCcEEEecCc
Confidence 3576666665443 2 4689887665 688888899999998764
No 313
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=32.79 E-value=67 Score=26.79 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 12 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTGASDG---IGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666665432 2367899999999999887643
No 314
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=32.77 E-value=27 Score=28.63 Aligned_cols=37 Identities=24% Similarity=0.159 Sum_probs=26.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+++-.+..|+..-...+++.|.++|++|..+-.+.
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 3444444555666667889999999999998876543
No 315
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=32.77 E-value=38 Score=30.61 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|.+.+|+++-.+-.| +.+|..|+++|++|+++=-
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 556789998876544 7789999999999999854
No 316
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=32.58 E-value=49 Score=27.89 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=31.5
Q ss_pred CEEE-EEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 12 PHVL-VIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 12 ~~il-~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
++++ ++.. ++.|=..-...||..|+++|++|.++-.....
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4444 4443 68899999999999999999999998765443
No 317
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.46 E-value=1.1e+02 Score=25.79 Aligned_cols=42 Identities=10% Similarity=0.167 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
.|+++++..+ |----=.++|+.|+++|++|+++.-....+.+
T Consensus 26 ~k~vlVTGas-g~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 26 GKKILITGLL-SNKSIAYGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp TCEEEECCCC-STTCHHHHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred CCEEEEECCC-CCCCHHHHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 3566666643 11001367899999999999988765533333
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.46 E-value=1.8e+02 Score=23.93 Aligned_cols=92 Identities=8% Similarity=0.034 Sum_probs=51.5
Q ss_pred ccccCCCCcceEEecCCcchHHHHHhcCCceecccC-ccchhhHHHhh-----ccceeeEEEecCCCCCCcCHHHHHHHH
Q 042709 279 ENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPS-FADQHHNRNYI-----CDVWKIGVQLLPDENGIITRQEIQINV 352 (398)
Q Consensus 279 ~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~~-----~~~~g~g~~l~~~~~~~~~~~~l~~ai 352 (398)
...|..+++ +|.--|.-.+++.++.-.- ..+|. ..|.+..+... .+. ++-+.+..++....-...|++.|
T Consensus 86 ~~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 86 EEDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp GGGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHH
T ss_pred HhHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHH
Confidence 344666666 8888888777776664332 33333 35766555332 332 45555655322333457888888
Q ss_pred HHHhcCH--HHHHHHHHHHHHHHH
Q 042709 353 KALLKND--GIKGNSLKLKEIARK 374 (398)
Q Consensus 353 ~~~l~~~--~~~~~a~~l~~~~~~ 374 (398)
...+... .+-+.+.++++.+++
T Consensus 162 e~~lp~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 162 SSNYDESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHHHHHHH
Confidence 8888653 466666677777665
No 319
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=32.42 E-value=1.5e+02 Score=25.97 Aligned_cols=19 Identities=11% Similarity=-0.211 Sum_probs=15.4
Q ss_pred hHHHHHHHhCCceEEEcCC
Q 042709 114 WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 114 ~~~~~A~~lgiP~v~~~~~ 132 (398)
....+|+.+|+|++...+.
T Consensus 214 ~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 214 QMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp HHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHhCCCEEEEecc
Confidence 4568899999999987654
No 320
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=32.42 E-value=72 Score=22.70 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=31.1
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHHhhh
Q 042709 342 IITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGS---SFRKFDSFISQIKVLR 397 (398)
Q Consensus 342 ~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~ 397 (398)
.++++++.+....+- ..+.+++-|.+.+... .+|+. ....+.+|.+..+++|
T Consensus 2 ~~~~eq~~k~~~el~---~v~~n~~lL~EML~~~-~p~~~~~~~~el~~eL~~~c~~~q 56 (103)
T 1wrd_A 2 PLGSEQIGKLRSELE---MVSGNVRVMSEMLTEL-VPTQAEPADLELLQELNRTCRAMQ 56 (103)
T ss_dssp CSSSTTHHHHHHHHH---HHHHHHHHHHHHHHHS-CTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHHHHHhc-CCCCCCcccHHHHHHHHHHHHHHH
Confidence 356777766665554 4788888888887753 33332 2345556666655553
No 321
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=32.37 E-value=41 Score=28.40 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-..
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 355666665533 34678999999999999887543
No 322
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=32.29 E-value=57 Score=28.06 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++|+++- +.|.+ =..|++.|.++||+|+.++-.
T Consensus 7 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 56777654 33433 347899999999999998653
No 323
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=32.18 E-value=2.3e+02 Score=23.84 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCccCH-HH-HHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHV-AP-LMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~-~p-~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|.+.+|.++.......+ .. .-.+-+++.++|+++.+..+.
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 42 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPP 42 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCC
Confidence 56788888776542222 22 334556677789988887754
No 324
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=32.15 E-value=53 Score=30.86 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH-GI-DVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~ 49 (398)
++.|||.++-.+..| +.+|..|+++ || +|+.+....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 445899999888887 5789999999 99 999987643
No 325
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=32.15 E-value=87 Score=19.02 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=32.0
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 042709 337 PDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKV 395 (398)
Q Consensus 337 ~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 395 (398)
.++++.++.+++...+..+-. .-...++...++. ....|+..-..++|++.+..
T Consensus 11 ~d~~G~i~~~e~~~~l~~~~~----~~~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 11 VNGDGAVSYEEVKAFVSKKRA----IKNEQLLQLIFKS-IDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp TTCSSSCCHHHHHHHHHHHHH----HHHHHHHHHHHHH-HCTTCSSSCCHHHHHHHHTC
T ss_pred CCCCCcccHHHHHHHHHHccC----CCcHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHh
Confidence 345688999999999987632 2222344445543 23345545556677766543
No 326
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.14 E-value=48 Score=26.44 Aligned_cols=37 Identities=24% Similarity=0.495 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMK-LATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~ 48 (398)
+|||+++-.. .|+..-+.. +++.|.+.|++|.++.-.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 3789987777 887665544 456666679988877543
No 327
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=31.95 E-value=83 Score=25.80 Aligned_cols=37 Identities=16% Similarity=0.031 Sum_probs=24.8
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++++. . +.|.+ =.++++.|+++|++|+.+.-.
T Consensus 4 ~~~~~~vlVT-G-asggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 4 NFSGLRALVT-G-AGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CCTTCEEEEE-S-TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEe-C-CCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4556665554 3 33333 357899999999999887653
No 328
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=31.91 E-value=39 Score=29.48 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.++|.|+-.+..|. .+|+.|.+.||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 48899998876664 578889999999988764
No 329
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=31.81 E-value=55 Score=26.41 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=29.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356677777778888899999999999999888765
No 330
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=31.67 E-value=37 Score=30.78 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=26.4
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.+++.+|+++-.+-.| +.+|..|+++|++|+++=-
T Consensus 20 ~~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeC
Confidence 4457899998776544 7889999999999999854
No 331
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=31.64 E-value=73 Score=26.33 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=27.0
Q ss_pred ccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 3 TQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 3 ~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++...|++++|++ +. +.|-+ =..+++.|+++|++|+.+.-.
T Consensus 3 ~~~~~~~~~~~vlV-tG-asggi--G~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 3 NSDNLRLDGKCAII-TG-AGAGI--GKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp CGGGGCCTTCEEEE-TT-TTSHH--HHHHHHHHHTTTCEEEEEESC
T ss_pred CccCCCCCCCEEEE-EC-CccHH--HHHHHHHHHHCCCEEEEEcCC
Confidence 34444566665544 43 33433 357899999999999987653
No 332
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=31.62 E-value=99 Score=24.61 Aligned_cols=38 Identities=18% Similarity=0.090 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++||+++-+++. ...-+....+.|.+.|++|+++++..
T Consensus 3 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 3 SKRALVILAKGA-EEMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCEEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 468998888764 34456667888999999999999754
No 333
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=31.59 E-value=41 Score=29.55 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHG----IDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~~~ 49 (398)
|++|||.|+-.+..|. .+|..|.+.| |+|+++....
T Consensus 20 ~~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECCCc
Confidence 5578999998876664 6788899999 9999887543
No 334
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=31.40 E-value=49 Score=28.56 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPL--MKLATKIAEHG-IDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 48 (398)
++.|||++.. ..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 5789999954 44886554 57888888899 999998764
No 335
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=31.37 E-value=52 Score=28.27 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+|+-.+..|. .+++.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 6899998777764 468889999999987754
No 336
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=31.28 E-value=69 Score=27.21 Aligned_cols=32 Identities=13% Similarity=0.081 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+++++..+ | --=.++++.|+++|++|+++.-
T Consensus 30 k~vlVTGas-~--gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGS-R--GIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCC-C--hHHHHHHHHHHHCCCEEEEEeC
Confidence 455565544 3 2345789999999999988764
No 337
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.25 E-value=43 Score=27.25 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+|+++ ++.|.+ =..|++.|.++||+|+.++-.
T Consensus 5 ~~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 676665 333433 357899999999999998764
No 338
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=31.25 E-value=35 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=12.3
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 042709 29 MKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 29 l~La~~L~~rGh~Vt~~~ 46 (398)
......+++.|.+|.+++
T Consensus 69 ~~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 69 VRQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 333444456799999998
No 339
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=31.23 E-value=33 Score=31.54 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCccc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHG--IDVTFVNTEFI 50 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~ 50 (398)
|. +||+++-.+..| +..|+.|+++| ++||++...+.
T Consensus 1 M~-K~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 1 MA-KHVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp -C-CEEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CC-CcEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCCC
Confidence 54 378888765544 45567777655 99999987653
No 340
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=31.00 E-value=1.3e+02 Score=26.18 Aligned_cols=95 Identities=5% Similarity=-0.083 Sum_probs=52.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-----------hHHHHHhhcccccCCCCCeEEEEcCCCCCC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI-----------HAKIIASMQGKAENSSSQIMLVSIPDGLDL 80 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
|||+|+..|.. .....++|.++||+|..+.+... .....+. ++.+..... .
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~----------gIpv~~~~~-~-- 62 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER----------GIPVYAPDN-V-- 62 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH----------TCCEECCSC-C--
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc----------CCCEECCCc-C--
Confidence 57888765321 24446778888999987776432 2222332 455443221 1
Q ss_pred CCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCcH
Q 042709 81 QADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 134 (398)
. ...+. +.+++. ||++|+=.+.. -...+-......++-+.++..
T Consensus 63 -----~-~~~~~----~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLL 108 (305)
T 2bln_A 63 -----N-HPLWV----ERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLL 108 (305)
T ss_dssp -----C-SHHHH----HHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCT
T ss_pred -----C-cHHHH----HHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCCcC
Confidence 1 11222 222344 99999876643 445555555566777777643
No 341
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=30.98 E-value=44 Score=27.46 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=27.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..+++..+..|+..-...+++.|.++|++|..+-.+.
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 49 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGA 49 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecccc
Confidence 3444445555777777899999999999998876543
No 342
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=30.98 E-value=63 Score=27.28 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+ |- -=.++++.|+++|++|+++.-.
T Consensus 21 ~k~~lVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGS-RG--LGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3455555544 32 3468899999999999987643
No 343
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=30.96 E-value=22 Score=26.32 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=20.8
Q ss_pred ccEEEecCcch--hHHHHHHHh---CCceEEEc
Q 042709 103 TACVIADISVG--WALEVAEAI---GIARAAFV 130 (398)
Q Consensus 103 pD~vi~D~~~~--~~~~~A~~l---giP~v~~~ 130 (398)
||+||.|...+ -|..+++.+ ++|++.++
T Consensus 54 ~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 54 FDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp SSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 99999999887 456666544 78876654
No 344
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=30.84 E-value=36 Score=24.09 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=50.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHG-IDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHK 90 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
++|+++-.+..| ..+++.|.++| ++|+.+.... +...... ..++.+...+ ..+...
T Consensus 6 ~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~~--~~~~~~~-------~~~~~~~~~d---------~~~~~~ 62 (118)
T 3ic5_A 6 WNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHDL--AALAVLN-------RMGVATKQVD---------AKDEAG 62 (118)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESCH--HHHHHHH-------TTTCEEEECC---------TTCHHH
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCCH--HHHHHHH-------hCCCcEEEec---------CCCHHH
Confidence 678877543333 46789999999 9998876533 2222211 0245554431 112222
Q ss_pred HHhhchhhccCCccEEEecCcch---hHHHHHHHhCCceEEEcCCcH
Q 042709 91 LMTEDPQADTECTACVIADISVG---WALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 91 ~~~~~~~~~~~~pD~vi~D~~~~---~~~~~A~~lgiP~v~~~~~~~ 134 (398)
+.+.+ ..+|+||.-.-.. .....+...|++.+.++....
T Consensus 63 ~~~~~-----~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (118)
T 3ic5_A 63 LAKAL-----GGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTEDVA 104 (118)
T ss_dssp HHHHT-----TTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSCHH
T ss_pred HHHHH-----cCCCEEEECCCchhhHHHHHHHHHhCCCEEEecCcHH
Confidence 22211 1277777654322 234455667888776554444
No 345
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=30.82 E-value=91 Score=21.60 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+...|++++-.+ . .....+..|.+.|++|.++..
T Consensus 55 ~~~~iv~yC~~g--~--rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG--V--RSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS--S--HHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC--h--HHHHHHHHHHHCCCCeEEeCC
Confidence 446788888543 2 355678999999998876543
No 346
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=30.78 E-value=34 Score=30.86 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=36.9
Q ss_pred ccccCCCCcceEEecCCcchHHHHHhc----CCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHH
Q 042709 279 ENDLGHPSIAWFLSHCGWNSTMEGLSM----GVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKA 354 (398)
Q Consensus 279 ~~lL~~~~~~~~ItHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~ 354 (398)
..+-..+++ +|+=||=||++.|.+. ++|++.+= +| .+.. --.++.+++.+++++
T Consensus 103 ~~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGiN---------------~G---~LGF--Lt~~~~~~~~~~l~~ 160 (365)
T 3pfn_A 103 DDISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAFH---------------LG---SLGF--LTPFSFENFQSQVTQ 160 (365)
T ss_dssp CCCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEEE---------------SS---SCTT--TCCEESTTHHHHHHH
T ss_pred hhcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEEc---------------CC---CCcc--ceeecHHHHHHHHHH
Confidence 344455666 9999999999999773 46776641 11 1111 123455777888888
Q ss_pred HhcC
Q 042709 355 LLKN 358 (398)
Q Consensus 355 ~l~~ 358 (398)
++++
T Consensus 161 vl~g 164 (365)
T 3pfn_A 161 VIEG 164 (365)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 8765
No 347
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=30.71 E-value=92 Score=30.90 Aligned_cols=42 Identities=7% Similarity=-0.034 Sum_probs=34.5
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++|+.+||+|+..++. ...=+....+.|.+.|++|+++++..
T Consensus 530 ~~m~~rkVaILl~dGf-e~~El~~p~dvL~~AG~~V~ivS~~g 571 (715)
T 1sy7_A 530 PTIKSRRVAIIIADGY-DNVAYDAAYAAISANQAIPLVIGPRR 571 (715)
T ss_dssp SCCTTCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCCCEEEEEEcCCC-CHHHHHHHHHHHHhcCCEEEEEECCC
Confidence 3588899999988763 55667788899999999999999864
No 348
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=30.70 E-value=59 Score=27.84 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=23.4
Q ss_pred CCCEEEE-EcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLV-IPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~-~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.+++||+ .+.|- ==..-+=.+...++++|++|++++-.
T Consensus 6 ~~~rvLvv~aHPD-De~lg~GGtia~~~~~G~~V~vv~~T 44 (273)
T 3dff_A 6 GATRLLAISPHLD-DAVLSFGAGLAQAAQDGANVLVYTVF 44 (273)
T ss_dssp --CEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCCCEEEEEeCCC-hHHHhHHHHHHHHHHCCCcEEEEEEe
Confidence 3567774 44443 22334445666778899999998854
No 349
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=30.63 E-value=1e+02 Score=25.37 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=29.7
Q ss_pred CCEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPF-----PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.+||+|+.+ ++ --..=+....+.|.+.|++|+++++..
T Consensus 6 m~kv~ill~~~~~~~g-~~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDG-SEIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTS-BCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 368999888 54 355556777888999999999999754
No 350
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=30.45 E-value=35 Score=27.72 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|||+++- +.|-+ =..+++.|.++||+|+.++-.
T Consensus 1 M~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 4666553 33333 257899999999999998754
No 351
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=30.44 E-value=40 Score=27.85 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=32.0
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhC-CCeEEEEeCccc
Q 042709 11 QPHVLVIP--FPALGHVAPLMKLATKIAEH-GIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~--~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 50 (398)
++|++.+. -++.|=..-...||..|+++ |++|.++-....
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45666443 37889999999999999999 999999877543
No 352
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=30.40 E-value=44 Score=29.94 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=33.5
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCccc
Q 042709 12 PHVLVIPF-PALGHVAPLMKLATKIA--EHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~ 50 (398)
++|+|++. ++-|=.+-...||..|+ ++|++|.++.....
T Consensus 18 ~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 18 HKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 56666654 78999999999999999 99999999998763
No 353
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=30.34 E-value=58 Score=21.31 Aligned_cols=47 Identities=17% Similarity=0.206 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 042709 344 TRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQI 393 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 393 (398)
.++++.+.-.+.|.|++++.....=+..|.+. .|-+...|++.++..
T Consensus 13 ~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra 59 (70)
T 2w84_A 13 PREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQS 59 (70)
T ss_dssp CCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHc
Confidence 34555544457899998877776666777765 899999999887764
No 354
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=30.33 E-value=50 Score=28.35 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++|+++- +.|.+= ..+++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 35666554 334432 46789999999999887654
No 355
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=30.29 E-value=63 Score=27.13 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|.+.|+++++..+.| -=.++|+.|+++|++|++...
T Consensus 1 M~~~k~vlVTGas~g---IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSRG---VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 444567777765532 246789999999999998633
No 356
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=30.21 E-value=59 Score=28.62 Aligned_cols=97 Identities=12% Similarity=0.020 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch--------------HHHHHhhcccccCCCCCeEEEEcC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIH--------------AKIIASMQGKAENSSSQIMLVSIP 75 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------------~~v~~~~~~~~~~~~~~~~~~~~~ 75 (398)
++|||+|+-.|..+ +..-++|.++||+|..+.+.... ....+. ++.+...
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~----------gIpv~~~- 66 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKH----------GIPVLQP- 66 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHT----------TCCEECC-
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHc----------CCCEEcc-
Confidence 34999999888654 34457788899999877764322 122222 4554321
Q ss_pred CCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCcH
Q 042709 76 DGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFGP 134 (398)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 134 (398)
+.+ . + .+..+. +++. ||++|+=.+.. -...+-......++-+.++..
T Consensus 67 ~~~-----~--~-~~~~~~----l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlL 115 (317)
T 3rfo_A 67 LRI-----R--E-KDEYEK----VLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLL 115 (317)
T ss_dssp SCT-----T--S-HHHHHH----HHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCT
T ss_pred ccC-----C--C-HHHHHH----HHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccC
Confidence 111 1 1 112222 2344 99999987743 455555555666777777653
No 357
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=30.16 E-value=1.6e+02 Score=26.33 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=35.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
+.-+++...|+.|=..=.+.++..++++|..|.|++.+...+
T Consensus 63 G~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~ 104 (356)
T 1u94_A 63 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALD 104 (356)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 345678888899999999999999999999999999975443
No 358
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=30.10 E-value=21 Score=30.68 Aligned_cols=52 Identities=15% Similarity=0.062 Sum_probs=36.2
Q ss_pred cceEEecCCcchHHHHHhc------CCceecccCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhcC
Q 042709 287 IAWFLSHCGWNSTMEGLSM------GVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLKN 358 (398)
Q Consensus 287 ~~~~ItHgG~~s~~eal~~------GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~ 358 (398)
.+++|+=||=||+.++... ++|++.+|.. . +|. + ..+.++++.++++.++++
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-----CcCCHHHHHHHHHHHHcC
Confidence 3449999999999999875 7888887641 1 121 1 234577788888888764
No 359
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=30.01 E-value=76 Score=25.42 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFP-ALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+.+|.++..+ +.|=..-.+.+++.+..+|.+|.++.+.
T Consensus 5 ~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 5 KDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp TTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 344567777666 8899999999999999999999999854
No 360
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=29.89 E-value=52 Score=26.70 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=28.0
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 14 VLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 14 il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|++... ++-|=..-.+.||..|+++|++|.++=
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 445554 788999999999999999999999963
No 361
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=29.69 E-value=51 Score=29.43 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=34.7
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCccc
Q 042709 11 QPHVLVIPF-PALGHVAPLMKLATKIA--EHGIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~~-~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~ 50 (398)
+++|+|++. ++.|=..-...||..|+ ++|++|.++.....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 467887665 88999999999999999 99999999999753
No 362
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=29.68 E-value=38 Score=31.56 Aligned_cols=37 Identities=30% Similarity=0.292 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFI 50 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~ 50 (398)
|++++|+++-.+..| +..|..|+++ |++|+++.....
T Consensus 1 M~~~~VvIIGaG~aG-----l~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 1 MSLKHVVVIGAVALG-----PKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp ---CEEEEECCSSHH-----HHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhhCcCCCEEEEECCCc
Confidence 556899999887655 5677888888 999999987654
No 363
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=29.67 E-value=2.3e+02 Score=23.14 Aligned_cols=104 Identities=8% Similarity=-0.004 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCccch----HHHHHhhcccccCCCCCeEEEEcCC-CCCCCCC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAE-HGIDVTFVNTEFIH----AKIIASMQGKAENSSSQIMLVSIPD-GLDLQAD 83 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 83 (398)
+++||+++..+..+-+ .+|.++..+ .+++|..+.+..-. ++.++. |+.+..++. .++
T Consensus 4 ~~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~----------gIp~~~~~~~~~~---- 66 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA----------DIPTHIIPHEEFP---- 66 (215)
T ss_dssp CCEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT----------TCCEEECCGGGSS----
T ss_pred CCcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCccccC----
Confidence 4678998877663333 344444444 36888887764321 223333 677776642 121
Q ss_pred CCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCCc
Q 042709 84 EREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 133 (398)
+-..+-..+.+.+++. ||++|+=.+.. -...+-+.+...++-+.++.
T Consensus 67 ---~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 67 ---SRTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp ---SHHHHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ---chhHhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 1112223344444666 99999987753 45566666666677666654
No 364
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=29.66 E-value=68 Score=26.21 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=34.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.|+++-|+|...++.|=..-.-.|++.|..+|+.|...-.|.
T Consensus 3 ~m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p~ 44 (213)
T 4edh_A 3 AMTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPG 44 (213)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCCC
Confidence 377888889999999999999999999999999997665553
No 365
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=29.61 E-value=54 Score=27.87 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=24.6
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..|+ |+++++..+.| + =.++++.|+++|++|+++.-.
T Consensus 18 ~~~~--k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS--STLFITGATSG-F--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp ---C--CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcC--cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 4454 56677765433 2 357899999999999987653
No 366
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=29.60 E-value=74 Score=29.13 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
+++|+++..+ .-...+++++.++|++|+.+.....
T Consensus 19 ~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 19 AQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3789998543 2456789999999999998877543
No 367
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=29.60 E-value=60 Score=31.30 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=33.7
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVLVIPF-PALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+.+|+|++. ++.|=..-...||..|+++|++|.++....
T Consensus 7 ~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456776655 788999999999999999999999999875
No 368
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=29.57 E-value=40 Score=30.47 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+..+|+++-.+-.| +.+|..|+++|++|+++=-
T Consensus 25 ~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 25 SDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 45689998877555 7789999999999999854
No 369
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=29.53 E-value=55 Score=30.23 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|||.++-.+..| ..+|..|+++||+|+.+..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 578888776666 5688899999999998854
No 370
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=29.50 E-value=50 Score=28.29 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=30.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.|+|..-++.|=..-.+.||..|+++|++|.++=...
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3446555788999999999999999999999886543
No 371
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=29.44 E-value=3.2e+02 Score=25.66 Aligned_cols=84 Identities=8% Similarity=0.028 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc--cchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE--FIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADERE 86 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
.++.||.++-... .-...|++.|.+.|.+|++++.. +..+.+.+.... .|+.+... ..+
T Consensus 73 l~G~ri~~~lh~~----~~ta~li~tL~~~GA~V~~~~~n~~stqd~~aaal~~------~gi~v~a~---------kge 133 (494)
T 3d64_A 73 LKGARIAGSLHMT----IQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVE------AGTPVFAF---------KGE 133 (494)
T ss_dssp TTTCEEEEESCCS----HHHHHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHHH------TTCCEECC---------TTC
T ss_pred CCCCEEEEEeCCc----HHHHHHHHHHHhCCCEEEEEecCCcccchHHHHHHHh------CCceEEEe---------cCC
Confidence 4688999876654 46788999999999999999976 244444333211 14544433 334
Q ss_pred CHHHHHhhchhhc---cCC-ccEEEecCc
Q 042709 87 DPHKLMTEDPQAD---TEC-TACVIADIS 111 (398)
Q Consensus 87 ~~~~~~~~~~~~~---~~~-pD~vi~D~~ 111 (398)
...++.......+ .+. |++++=|.-
T Consensus 134 t~~ey~~~~~~~l~~~~~~~p~~i~Ddgg 162 (494)
T 3d64_A 134 SLDEYWEFSHRIFEWPNGEFANMILDDGG 162 (494)
T ss_dssp CHHHHHHHHHHTTCCSTTCCCCEEEESSS
T ss_pred CHHHHHHHHHHHhccccCCCCceeecCCc
Confidence 4555555555554 345 988888853
No 372
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=29.33 E-value=17 Score=31.60 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|||+++-.++.|- .+|..|.+.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 37899998888774 5788899999999998764
No 373
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.33 E-value=69 Score=27.30 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 466777765543 346789999999999998864
No 374
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=29.21 E-value=1.1e+02 Score=22.17 Aligned_cols=37 Identities=11% Similarity=0.287 Sum_probs=25.3
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
..+++++|+++- .+-.-.-.|.+.|.+.|++|..+.+
T Consensus 3 ~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 3 LAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp ---CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 445678888875 4555667788888888998876554
No 375
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=29.16 E-value=50 Score=30.88 Aligned_cols=34 Identities=24% Similarity=0.151 Sum_probs=26.7
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 042709 9 CR-QPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNT 47 (398)
Q Consensus 9 m~-~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~ 47 (398)
|+ .|||.++-.+..| ..+|..|+++ ||+|+.+..
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 54 3799999877766 4678888888 899998854
No 376
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.08 E-value=30 Score=30.00 Aligned_cols=45 Identities=7% Similarity=-0.046 Sum_probs=32.1
Q ss_pred CCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCccchHHHH
Q 042709 11 QPHVLVIPFPALG----HVAPLMKLATKIAEHGIDVTFVNTEFIHAKII 55 (398)
Q Consensus 11 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 55 (398)
+|||+++..+-.+ -..-...++++|.++||+|..+........+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 5799988865322 13446688899999999999998875544443
No 377
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=28.86 E-value=13 Score=29.99 Aligned_cols=25 Identities=12% Similarity=0.328 Sum_probs=19.7
Q ss_pred ccceeeEEEecCCCCCCcCHHHHHHHHHHHhcC
Q 042709 326 CDVWKIGVQLLPDENGIITRQEIQINVKALLKN 358 (398)
Q Consensus 326 ~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~~ 358 (398)
++.-|+|+.+ |+|+|.++|.++++.
T Consensus 108 e~~cGVGV~V--------T~EqI~~~V~~~i~~ 132 (187)
T 3tl4_X 108 NENSGVGIEI--------TEDQVRNYVMQYIQE 132 (187)
T ss_dssp HHTTTTTCCC--------CHHHHHHHHHHHHHH
T ss_pred HHHCCCCeEe--------CHHHHHHHHHHHHHH
Confidence 3335888666 999999999999963
No 378
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=28.75 E-value=42 Score=28.82 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|.|+-.+..|. .+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4788888777774 578899999999998764
No 379
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=28.73 E-value=32 Score=30.50 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCcc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTEF 49 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~ 49 (398)
+|||.++-.+..|.. +|..|+..|| +|+++-...
T Consensus 9 ~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECCh
Confidence 479998866444433 8899999999 988876543
No 380
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.71 E-value=66 Score=27.50 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|.++.-.
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 456666665543 3367899999999999988754
No 381
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.71 E-value=1.9e+02 Score=24.91 Aligned_cols=109 Identities=16% Similarity=0.067 Sum_probs=60.1
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc--chHHHHHhhcccccCCCCCeEEEEcCCCCC
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEF--IHAKIIASMQGKAENSSSQIMLVSIPDGLD 79 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (398)
+.+...+++||+++..+. || -+.+|..+-.+- ..+|..+.+.. .....++. |+.+..+|....
T Consensus 83 ~l~~~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~ 149 (286)
T 3n0v_A 83 ELTAPNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH----------KIPYYHFALDPK 149 (286)
T ss_dssp EEECTTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCBTT
T ss_pred EeecCCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCcC
Confidence 344455688999888766 54 344455444332 36777766543 23333333 788887764221
Q ss_pred CCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCC
Q 042709 80 LQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~ 132 (398)
+-..+-..+.+.+++. ||++|.=.+.. -...+-+.+.-.++=+.++
T Consensus 150 -------~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 -------DKPGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -------BHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -------CHHHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 1111222333333454 99999987753 4555556665556655443
No 382
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=28.69 E-value=60 Score=28.46 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=22.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++++|++.- +.|.+ =..|++.|.++||+|+.+.-.
T Consensus 18 ~~~~vlVtG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVTG--SAGRV--GRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEET--TTSHH--HHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEC--CCChH--HHHHHHHHHhCCCEEEEEeCC
Confidence 456776653 33443 346789999999999988653
No 383
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=28.69 E-value=76 Score=23.12 Aligned_cols=43 Identities=7% Similarity=-0.052 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccCH--HHHHHHHHHHHhCC--CeEEEEeCccchHH
Q 042709 11 QPHVLVIPFPALGHV--APLMKLATKIAEHG--IDVTFVNTEFIHAK 53 (398)
Q Consensus 11 ~~~il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~~~~~~ 53 (398)
.+|++|+-+-..--. +-.+.+|....++| |+|.++-.......
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L 53 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKL 53 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeee
Confidence 478887766532222 34677899999999 89999998776653
No 384
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=28.68 E-value=29 Score=31.00 Aligned_cols=46 Identities=13% Similarity=0.014 Sum_probs=35.9
Q ss_pred ccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 3 TQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 3 ~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..||+.++..+|.+.-.+-.+--.-+-.|.++|.++||+|..+-..
T Consensus 10 ~~~~~~~~~~~vG~~l~~kk~~~~~~~~l~~al~~~G~~~~~iD~~ 55 (346)
T 2q7d_A 10 HHMQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLS 55 (346)
T ss_dssp TTGGGGGTTCEEEEECCHHHHHHHTHHHHHHHHHTTTCEEEECCTT
T ss_pred hhhccccCceEEEEEECcccchhhhHHHHHHHHHhCCcEEEEcccc
Confidence 4578888888888887765544444678999999999999987754
No 385
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=28.64 E-value=65 Score=26.83 Aligned_cols=34 Identities=0% Similarity=-0.101 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|.++++..+.| -=.++|+.|+++|++|+.+.-.
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 455666655432 3468899999999999887653
No 386
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=28.60 E-value=28 Score=30.11 Aligned_cols=27 Identities=4% Similarity=0.017 Sum_probs=22.6
Q ss_pred CCcceEEecCCcchHHHHHhc----CCceeccc
Q 042709 285 PSIAWFLSHCGWNSTMEGLSM----GVPFLCWP 313 (398)
Q Consensus 285 ~~~~~~ItHgG~~s~~eal~~----GvP~v~~P 313 (398)
+++ +|+=||=||+.+++.. ++|.+.++
T Consensus 64 ~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 455 9999999999999853 78888876
No 387
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=28.53 E-value=1.8e+02 Score=25.70 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=33.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchH
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHA 52 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~ 52 (398)
.+++.-.|+.|=..=.+.++..+.++ |..|.|+.++....
T Consensus 30 iteI~G~pGsGKTtL~Lq~~~~~~~~g~g~~vlyId~E~s~~ 71 (333)
T 3io5_A 30 LLILAGPSKSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGIT 71 (333)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHCTTCEEEEEESSCCCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCCceEEEEeccchhh
Confidence 57788889999999999999988887 89999999986543
No 388
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=28.48 E-value=94 Score=28.55 Aligned_cols=87 Identities=17% Similarity=0.098 Sum_probs=46.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHK 90 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
||||++..++.. .+||+.|.+.+. .-+++. +.+.... .. .......+ ...+...
T Consensus 4 mkvlviG~ggre-----~ala~~l~~s~~v~~v~~~-pgn~g~~-~~---------~~~~~~~~---------~~~d~~~ 58 (431)
T 3mjf_A 4 MNILIIGNGGRE-----HALGWKAAQSPLADKIYVA-PGNAGTA-LE---------PTLENVDI---------AATDIAG 58 (431)
T ss_dssp EEEEEEECSHHH-----HHHHHHHTTCTTEEEEEEE-ECCHHHH-HC---------TTCEECCC---------CTTCHHH
T ss_pred cEEEEECCCHHH-----HHHHHHHHhCCCCCEEEEE-CCCHHHh-hh---------cccceecC---------CcCCHHH
Confidence 899999877644 468999999875 333333 3333222 11 01111111 2233333
Q ss_pred HHhhchhhccCC-ccEEEecCcch---hHHHHHHHhCCceE
Q 042709 91 LMTEDPQADTEC-TACVIADISVG---WALEVAEAIGIARA 127 (398)
Q Consensus 91 ~~~~~~~~~~~~-pD~vi~D~~~~---~~~~~A~~lgiP~v 127 (398)
+.+. .+.. +|+|+..+-.. ......+.+|+|++
T Consensus 59 l~~~----a~~~~id~vv~g~e~~l~~~~~~~l~~~Gi~~~ 95 (431)
T 3mjf_A 59 LLAF----AQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIF 95 (431)
T ss_dssp HHHH----HHHTTEEEEEECSHHHHHTTHHHHHHHTTCCEE
T ss_pred HHHH----HHHhCcCEEEECCchHHHHHHHHHHHhcCCCee
Confidence 3322 2344 99998754332 24455667799875
No 389
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=28.46 E-value=60 Score=28.05 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=31.8
Q ss_pred CCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 11 QPHVL-VIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 11 ~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+++++ |..-++.|=..-...||..|+++|++|.++-...
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45554 6655788999999999999999999999987653
No 390
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=28.42 E-value=2.6e+02 Score=24.70 Aligned_cols=87 Identities=6% Similarity=0.033 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchHHHH--HhhcccccCCCCCeEEEEcCCCCCCCCCCCCCH
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFIHAKII--ASMQGKAENSSSQIMLVSIPDGLDLQADEREDP 88 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
+.-++++..|+.|=..=.+.++..+..+|..|.|++.+...+... +.+.. ...+.+. ...+.
T Consensus 61 G~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~~~~~~~a~~lG~~-----~~~l~i~-----------~~~~~ 124 (349)
T 2zr9_A 61 GRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVD-----TDSLLVS-----------QPDTG 124 (349)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCC-----GGGCEEE-----------CCSSH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCCCcCHHHHHHcCCC-----HHHeEEe-----------cCCCH
Confidence 345778888899999999999999999999999999876443322 22110 0112211 11123
Q ss_pred HHHHhhchhhccCC-ccEEEecCcch
Q 042709 89 HKLMTEDPQADTEC-TACVIADISVG 113 (398)
Q Consensus 89 ~~~~~~~~~~~~~~-pD~vi~D~~~~ 113 (398)
.+.........+.. ||+||.|....
T Consensus 125 e~~l~~~~~l~~~~~~~lIVIDsl~~ 150 (349)
T 2zr9_A 125 EQALEIADMLVRSGALDIIVIDSVAA 150 (349)
T ss_dssp HHHHHHHHHHHTTTCCSEEEEECGGG
T ss_pred HHHHHHHHHHHhcCCCCEEEEcChHh
Confidence 33333333333455 99999998865
No 391
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=28.35 E-value=89 Score=27.43 Aligned_cols=108 Identities=16% Similarity=0.091 Sum_probs=57.9
Q ss_pred CEEEEEcCCCccCHHH----HHHHHHHHHhCCCeEEEEeCc-cchHHHHHh-hcccccCCCCCeEEEEcCCCCCCCCCCC
Q 042709 12 PHVLVIPFPALGHVAP----LMKLATKIAEHGIDVTFVNTE-FIHAKIIAS-MQGKAENSSSQIMLVSIPDGLDLQADER 85 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p----~l~La~~L~~rGh~Vt~~~~~-~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
|.++++.--..|.++| .+..|+.|+. +|+.++-. ...+.+++. .. .+-+.+-... .+.+ ..
T Consensus 2 m~~lv~~e~~~g~l~~~~~eal~aA~~La~---~V~av~~G~~~~~~~~~a~~a----~GaDkv~~v~-d~~l-----~~ 68 (315)
T 1efv_A 2 QSTLVIAEHANDSLAPITLNTITAATRLGG---EVSCLVAGTKCDKVAQDLCKV----AGIAKVLVAQ-HDVY-----KG 68 (315)
T ss_dssp CEEEEECCEETTEECTHHHHHHHHHHTTTS---EEEEEEEESCCHHHHHHHHHS----TTCCEEEEEE-CGGG-----TT
T ss_pred ceEEEEEEccCCCcCHHHHHHHHHHHHhcC---cEEEEEECCchHHHHHHHHHh----cCCCEEEEec-Cchh-----cc
Confidence 5677666655565554 4555555543 66655432 223333333 11 1111222222 1111 12
Q ss_pred CCHHHHHhhchhhccCC-ccEEEecCcch---hHHHHHHHhCCceEEEcCC
Q 042709 86 EDPHKLMTEDPQADTEC-TACVIADISVG---WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-pD~vi~D~~~~---~~~~~A~~lgiP~v~~~~~ 132 (398)
.+.......+.+..+.. ||+|++-.... .+..+|.++|+|.++-.+.
T Consensus 69 ~~~~~~a~~La~li~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~ 119 (315)
T 1efv_A 69 LLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 119 (315)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEE
Confidence 23334444444444454 99999998664 5789999999999986654
No 392
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=28.35 E-value=1e+02 Score=25.56 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=24.3
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|++++++ ++..+ |- -=.++++.|+++|++|+.+.-.
T Consensus 4 ~~~~k~vl-ITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALAL-VTGAG-SG--IGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCTTCEEE-EETTT-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEE-EECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 45455444 44433 32 2367899999999999988653
No 393
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=28.25 E-value=31 Score=31.36 Aligned_cols=43 Identities=7% Similarity=-0.112 Sum_probs=28.9
Q ss_pred cccCCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCc
Q 042709 6 QLSCRQPHVLVIPFPALGHV----APLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+|+++||+++..+..+-- .-...++++|.+.||+|+.+...
T Consensus 32 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 32 RGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp -----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 35788899998887654443 45666778888889999998864
No 394
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=28.12 E-value=77 Score=24.80 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+++.|++.-.++.|=..-.-.|++.|..+|++|.++...
T Consensus 11 ~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d 50 (186)
T 2yvu_A 11 EKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGD 50 (186)
T ss_dssp SCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHH
Confidence 4566788888899999999999999999999999887643
No 395
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=28.07 E-value=71 Score=25.57 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=29.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 3456666677777778899999999999998887653
No 396
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=28.06 E-value=87 Score=26.94 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|++|+|+++... .....+.+.|.+.||+|.+...
T Consensus 3 ~~~m~i~v~~~~-----~~~~~~~~~L~~~g~~v~~~~~ 36 (293)
T 3d4o_A 3 LTGKHVVIIGGD-----ARQLEIIRKLSTFDAKISLVGF 36 (293)
T ss_dssp CTTCEEEEECBC-----HHHHHHHHHHHHTTCEEEEESC
T ss_pred ccCcEEEEECCC-----HHHHHHHHHHHhCCCEEEEecc
Confidence 678999988543 3556778999999999998753
No 397
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=27.98 E-value=75 Score=27.85 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|++++|+++- +.|.+ =..|++.|.++||+|+.++-
T Consensus 23 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 57 (351)
T 3ruf_A 23 FSPKTWLITG--VAGFI--GSNLLEKLLKLNQVVIGLDN 57 (351)
T ss_dssp HSCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3567777654 33444 35789999999999999875
No 398
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=27.97 E-value=44 Score=29.35 Aligned_cols=33 Identities=9% Similarity=0.130 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHG-IDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 48 (398)
.|+|.|+-.+..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4789999887766 67899999999 999988754
No 399
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=27.94 E-value=89 Score=25.94 Aligned_cols=34 Identities=24% Similarity=0.166 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|++..-.
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777765532 3467899999999999887653
No 400
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.92 E-value=55 Score=27.55 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=32.4
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 042709 11 QPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNTEFIH 51 (398)
Q Consensus 11 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 51 (398)
+++++.+.. ++.|=..-...||..|+ +|++|.++-.....
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~ 67 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQA 67 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTC
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 577775544 68899999999999999 99999999876543
No 401
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=27.88 E-value=91 Score=27.09 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+|+|++.- +.|.+ =..|++.|.++||+|+.++-.
T Consensus 13 ~M~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLG--ATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 46777663 33433 356789999999999988753
No 402
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=27.87 E-value=82 Score=27.32 Aligned_cols=40 Identities=23% Similarity=0.097 Sum_probs=23.4
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+|+.+ .++|++.- +.|.+ =..|++.|.++||+|+.+.-.
T Consensus 8 ~~~~~~-~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 8 HHHGSM-TRSALVTG--ITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --------CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cccccc-CCeEEEEC--CCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 334333 46666553 33433 356889999999999998754
No 403
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=27.83 E-value=62 Score=29.16 Aligned_cols=36 Identities=8% Similarity=0.179 Sum_probs=29.1
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPAL-GHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.+|+++.=-+. .-+.=++.|++.|.++|++|+|++-
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK 249 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAAN 249 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEB
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEEC
Confidence 68888888774 4555568999999999999998764
No 404
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.75 E-value=34 Score=28.27 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=21.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 14 VLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 14 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|+++-.+-.| +.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 6666554333 788999999999999974
No 405
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=27.73 E-value=87 Score=27.25 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=21.4
Q ss_pred CcccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 1 METQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 1 ~~~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|-++.++ | +++|++.- +.|.+= ..|++.|.++||+|+.+.
T Consensus 1 ~~~~~~~-~-~~~vlVTG--atGfIG--~~l~~~Ll~~G~~V~~~~ 40 (338)
T 2rh8_A 1 MATQHPI-G-KKTACVVG--GTGFVA--SLLVKLLLQKGYAVNTTV 40 (338)
T ss_dssp ----------CCEEEEEC--TTSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CCcCcCC-C-CCEEEEEC--CchHHH--HHHHHHHHHCCCEEEEEE
Confidence 3444444 4 35665543 334332 468899999999998755
No 406
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=27.61 E-value=69 Score=23.16 Aligned_cols=93 Identities=11% Similarity=0.109 Sum_probs=57.5
Q ss_pred EEEEEeCCcccCCHHHHHHhhc--cceecccCcccccCCCCcceEEecCCcch---------HHHHHhcCCceecccCcc
Q 042709 248 VTYVAFGRFSILGQEQLEQLAL--GKIVEWAPQENDLGHPSIAWFLSHCGWNS---------TMEGLSMGVPFLCWPSFA 316 (398)
Q Consensus 248 vVyvs~Gs~~~~~~~~~~~~~~--~~v~~~vpq~~lL~~~~~~~~ItHgG~~s---------~~eal~~GvP~v~~P~~~ 316 (398)
.||+|++..- .-+.+...+. ++ .|.. .-++.+++ +|--.|..| +..|...|+|++++=.++
T Consensus 6 ~lFISh~~~d--~~~~L~~~l~~~~f--~~~~--~~I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g 77 (111)
T 1eiw_A 6 RLYITEGEVE--DYRVFLERLEQSGL--EWRP--ATPEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYG 77 (111)
T ss_dssp EEEECCCCSH--HHHHHHHHHHHHCS--CEEE--CCSSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSS
T ss_pred EEEEecccHh--HHHHHHHHHhCCCC--eeec--CccccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCC
Confidence 6888888653 2233333332 11 1222 44677888 999999998 667889999999886666
Q ss_pred chhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHHhc
Q 042709 317 DQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKALLK 357 (398)
Q Consensus 317 DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~l~ 357 (398)
.+. .-..+++ .|..+ -..+.+.|.++|+..++
T Consensus 78 ~~~-~P~~l~~---~a~~i-----V~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 78 LEN-VPPELEA---VSSEV-----VGWNPHCIRDALEDALD 109 (111)
T ss_dssp SSC-CCTTHHH---HCSEE-----ECSCHHHHHHHHHHHHC
T ss_pred CCc-CCHHHHh---hCcee-----ccCCHHHHHHHHHhccC
Confidence 541 1122333 22222 23588999999988764
No 407
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=27.58 E-value=79 Score=26.96 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=24.8
Q ss_pred CCCEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 10 RQPHVLVI-PFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 10 ~~~~il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..++||++ +.|- ==..-+=.+...++++|++|++++-..
T Consensus 6 ~~~rvLvv~aHPD-De~l~~GGtia~~~~~G~~V~vv~~T~ 45 (270)
T 3dfi_A 6 DRTRILAISPHLD-DAVLSVGASLAQAEQDGGKVTVFTVFA 45 (270)
T ss_dssp CCSEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEEEeCCc-hHHHhhHHHHHHHHhCCCeEEEEEEeC
Confidence 45677744 4442 223444566677788999999987543
No 408
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=27.37 E-value=2.4e+02 Score=23.53 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=35.0
Q ss_pred CCCEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCccchH
Q 042709 10 RQPHVLVIPF-----------PALGHVAPLMKLATKIAEHGIDVTFVNTEFIHA 52 (398)
Q Consensus 10 ~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 52 (398)
++..|-++|- -..||..-...+.+.|.+.|.+|+++..+....
T Consensus 87 kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~q 140 (243)
T 1m5w_A 87 KPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQ 140 (243)
T ss_dssp CCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHH
T ss_pred CCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3455666665 466999999999999999999999999887654
No 409
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=27.36 E-value=54 Score=26.86 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=22.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
||+++++.++.| -=.++|+.|+++|++|+++.-.
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 355666665432 3467899999999999887653
No 410
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=27.27 E-value=55 Score=30.46 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|++++|+++-. |.+- ..+++.|+++|++|+++.-
T Consensus 1 M~~k~VlViGa---G~iG--~~ia~~L~~~G~~V~v~~R 34 (450)
T 1ff9_A 1 MATKSVLMLGS---GFVT--RPTLDVLTDSGIKVTVACR 34 (450)
T ss_dssp -CCCEEEEECC---STTH--HHHHHHHHTTTCEEEEEES
T ss_pred CCCCEEEEECC---CHHH--HHHHHHHHhCcCEEEEEEC
Confidence 56678888843 4443 3578889999999888764
No 411
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=27.21 E-value=92 Score=27.85 Aligned_cols=33 Identities=9% Similarity=-0.022 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||+++..+ ..-..++++|.+.||+|+++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 578888754 235678889999999999988754
No 412
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=27.18 E-value=87 Score=25.89 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|.++++..+.| -=.++|+.|+++|++|++...
T Consensus 4 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 456677665532 346789999999999988764
No 413
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=27.13 E-value=44 Score=30.89 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~ 49 (398)
|++++|+++-.+..| +..|..|+++ |++|+++....
T Consensus 1 M~~~~VvIIGgG~aG-----l~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAG-----MSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHHCTTSEEEEECSSS
T ss_pred CCcCcEEEECCcHHH-----HHHHHHHHHhCcCCCEEEEECCC
Confidence 566899999887655 6778888887 89999997654
No 414
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=27.11 E-value=79 Score=26.53 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+++++..+ |- -=.++++.|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAA-QG--IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-Cc--HHHHHHHHHHHCCCEEEEEECC
Confidence 445555443 32 2467899999999999987643
No 415
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=27.01 E-value=87 Score=26.15 Aligned_cols=36 Identities=8% Similarity=-0.026 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+++ .++++..+ |- -=.++++.|+++|++|+++.-.
T Consensus 7 l~~k-~vlVTGas-~g--iG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGC-TALVTGGS-RG--IGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CTTC-EEEEESCS-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCC-EEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3344 44555443 22 2357899999999999887643
No 416
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=27.00 E-value=61 Score=28.80 Aligned_cols=36 Identities=19% Similarity=0.150 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++++|+++ ++.|.+= ..|++.|.++||+|+.++-.
T Consensus 3 ~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 3 QQKKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 445677665 3444442 46789999999999988754
No 417
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.97 E-value=72 Score=27.19 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|++..-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666665543 346889999999999988764
No 418
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=26.97 E-value=20 Score=31.99 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=28.1
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-------CeEEEEeCcc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHG-------IDVTFVNTEF 49 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rG-------h~Vt~~~~~~ 49 (398)
.|.+|||+|+-.+..|. .+|..|+++| |+|+++....
T Consensus 5 ~m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 5 SMASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp --CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred ccCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 46678999998877664 5688888889 9999987643
No 419
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=26.89 E-value=50 Score=31.01 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|||.++-.+..| +.+|..|+++||+|+.+..
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 4899999887666 5679999999999999865
No 420
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=26.82 E-value=1e+02 Score=26.13 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
+-|+++++..+.| -=.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4578888887665 346889999999999988764
No 421
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=26.81 E-value=93 Score=25.68 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.|.++++..+.| -=.++|+.|+++|++|++..-.
T Consensus 13 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 13 TGKTSLITGASSG---IGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 5566666665533 3467899999999999987753
No 422
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.80 E-value=26 Score=30.74 Aligned_cols=30 Identities=13% Similarity=0.136 Sum_probs=23.3
Q ss_pred CCCCcceEEecCCcchHHHHHhc----CCceecccC
Q 042709 283 GHPSIAWFLSHCGWNSTMEGLSM----GVPFLCWPS 314 (398)
Q Consensus 283 ~~~~~~~~ItHgG~~s~~eal~~----GvP~v~~P~ 314 (398)
..+++ +|+-||=||+.+++.. ++|++.++.
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34566 9999999999999865 888888753
No 423
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=26.66 E-value=79 Score=23.78 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=59.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchHHHHH-hhcccccCCCCCeEEEEcCCCCCCCCCCCCCH
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHAKIIA-SMQGKAENSSSQIMLVSIPDGLDLQADEREDP 88 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
|+|++... ..+=.-++.+|+.|.+. ||+ ++.+......+.+ . |+....+..+...+ -
T Consensus 4 ~~ialsv~--D~dK~~~v~~a~~~~~ll~Gf~--l~AT~gTa~~L~e~~----------Gl~v~~v~k~~~eG------~ 63 (134)
T 2xw6_A 4 RALALIAH--DAKKEEMVAFCQRHREVLARFP--LVATGTTGRRIEEAT----------GLTVEKLLSGPLGG------D 63 (134)
T ss_dssp CEEEEEEC--GGGHHHHHHHHHHTHHHHTTSC--EEECHHHHHHHHHHH----------CCCCEECSCGGGTH------H
T ss_pred cEEEEEEe--cccHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHhh----------CceEEEEEecCCCC------c
Confidence 67776654 34556789999999999 995 4577777888877 5 56555553211011 1
Q ss_pred HHHHhhchhhccCC-ccEEEecCc--c--------hhHHHHHHHhCCceEE
Q 042709 89 HKLMTEDPQADTEC-TACVIADIS--V--------GWALEVAEAIGIARAA 128 (398)
Q Consensus 89 ~~~~~~~~~~~~~~-pD~vi~D~~--~--------~~~~~~A~~lgiP~v~ 128 (398)
.+ +.+.+++. .|+||.-.- . ..-..+|-..+||++.
T Consensus 64 p~----I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 64 QQ----MGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HH----HHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred ch----HHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 12 23333455 888887433 1 1356888899999986
No 424
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=26.60 E-value=85 Score=26.68 Aligned_cols=34 Identities=18% Similarity=0.121 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666665543 3467899999999999887653
No 425
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=26.56 E-value=1.5e+02 Score=24.52 Aligned_cols=36 Identities=11% Similarity=0.267 Sum_probs=23.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe-EEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGID-VTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~-Vt~~~~~ 48 (398)
|+++++++. . +.| --=.++++.|+++|++ |+++.-.
T Consensus 3 l~~k~vlVt-G-as~--gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 3 LTNKNVIFV-A-ALG--GIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CTTCEEEEE-T-TTS--HHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCCcEEEEE-C-CCC--hHHHHHHHHHHHCCCcEEEEEecC
Confidence 445555554 3 334 2346889999999997 7776544
No 426
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.07 E-value=95 Score=24.94 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 042709 11 QPHVLVIPFPALGHVAPLMK-LATKIAEHGIDVTFVNT 47 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~ 47 (398)
+|||+++-+-..|+..-+.. +++.|.+.|++|.++.-
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 47888776655777665544 46667778888877654
No 427
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.07 E-value=1.3e+02 Score=25.30 Aligned_cols=34 Identities=18% Similarity=0.042 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 356666665532 3467899999999999988744
No 428
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=26.05 E-value=77 Score=26.30 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=22.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+++++..+ |- -=.++++.|+++|++|+.+.-
T Consensus 2 k~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCA-TG--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 455555544 32 346789999999999988753
No 429
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=25.89 E-value=57 Score=27.70 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+|+-.+..| ..+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 578888766555 4578899999999988754
No 430
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=25.88 E-value=1.4e+02 Score=23.97 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=29.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||+|+.+++. ...-+....+.|.+.|++|+++++..
T Consensus 3 ~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 3 ASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 58998888765 45566777889999999999999754
No 431
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.82 E-value=95 Score=26.12 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|.++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666665543 346889999999999998876
No 432
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=25.80 E-value=51 Score=26.79 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCccc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 50 (398)
..||+++-+++...+- ....++.|.++ |++|+++++...
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 4689999888776653 44677888888 999999998754
No 433
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=25.79 E-value=1.2e+02 Score=25.12 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=24.2
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 6 QLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 6 ~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++.++++++ +++..+ |- -=.++++.|+++|++|+++.-.
T Consensus 14 ~~~~~~k~v-lVTGas-~g--IG~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 14 ELGIRDKGV-LVLAAS-RG--IGRAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp --CCTTCEE-EEESCS-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred HhccCCCEE-EEECCC-CH--HHHHHHHHHHHCCCEEEEEcCC
Confidence 344445554 444433 32 2457899999999999887654
No 434
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=25.78 E-value=43 Score=16.46 Aligned_cols=13 Identities=15% Similarity=0.531 Sum_probs=5.9
Q ss_pred HHHHHHHHHHhhh
Q 042709 385 KFDSFISQIKVLR 397 (398)
Q Consensus 385 ~~~~~~~~~~~~~ 397 (398)
.++.+-+.++++|
T Consensus 9 eledlqerlrklr 21 (27)
T 3twe_A 9 ELEDLQERLRKLR 21 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 435
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=25.69 E-value=38 Score=33.72 Aligned_cols=107 Identities=10% Similarity=-0.065 Sum_probs=69.4
Q ss_pred CcccccCCCCcceEEecCCcchHHHHHhcCCceecccCccchhhHHHhhccceeeEEEecCCC----CCCcCHHHHHHHH
Q 042709 277 PQENDLGHPSIAWFLSHCGWNSTMEGLSMGVPFLCWPSFADQHHNRNYICDVWKIGVQLLPDE----NGIITRQEIQINV 352 (398)
Q Consensus 277 pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~----~~~~~~~~l~~ai 352 (398)
+-.++|..+++ +||=- .+.+.|.+..++|+|....-.|+...- . .|. ..+..+ .-.-+.++|.++|
T Consensus 608 di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg~--y~d~~~~~pg~~~~~~~eL~~~i 677 (729)
T 3l7i_A 608 DVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RGF--YMNYMEDLPGPIYTEPYGLAKEL 677 (729)
T ss_dssp CHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CSB--SSCTTSSSSSCEESSHHHHHHHH
T ss_pred CHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CCc--ccChhHhCCCCeECCHHHHHHHH
Confidence 34456766777 88874 467789999999999987655554321 1 122 222110 1234789999999
Q ss_pred HHHhcC-HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042709 353 KALLKN-DGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIK 394 (398)
Q Consensus 353 ~~~l~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 394 (398)
.....+ ..|+++.+++.+.+-.. .+|.++.+.++.+.+...
T Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 678 KNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp TTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred hhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 888763 46788888888887643 446666777776665544
No 436
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=25.58 E-value=47 Score=32.81 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
++.+|+++-.+..| +..|..|+++||+|+++-..
T Consensus 390 ~~~~VvIIGgG~AG-----l~aA~~La~~G~~V~liE~~ 423 (690)
T 3k30_A 390 SDARVLVVGAGPSG-----LEAARALGVRGYDVVLAEAG 423 (690)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHHTCEEEEECSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCeEEEEecC
Confidence 46789998887655 77889999999999998764
No 437
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=25.55 E-value=73 Score=28.31 Aligned_cols=34 Identities=6% Similarity=-0.175 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
++|+++..+ .-...+++++.++||+|+++.+...
T Consensus 2 ~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 35 (365)
T 2z04_A 2 LTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKEN 35 (365)
T ss_dssp CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSSS
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 678888543 4467889999999999999887543
No 438
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.37 E-value=96 Score=21.93 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 35 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMS 35 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESS
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECC
Confidence 5567888774 3555566778888888998877654
No 439
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.33 E-value=95 Score=25.98 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 356666665533 3467899999999999887653
No 440
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=25.25 E-value=98 Score=26.58 Aligned_cols=77 Identities=8% Similarity=-0.010 Sum_probs=44.6
Q ss_pred CeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch--hHH
Q 042709 40 IDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQADEREDPHKLMTEDPQADTEC-TACVIADISVG--WAL 116 (398)
Q Consensus 40 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~--~~~ 116 (398)
.+..+++++.+.-..... |++...+-...+...-.. .-+..+.+.+++. ..+|+++..+. .+.
T Consensus 177 ~~~~v~~H~af~Yf~~~y----------Gl~~~~~~~~~~~~eps~----~~l~~l~~~ik~~~v~~if~e~~~~~~~~~ 242 (284)
T 3cx3_A 177 QKTFVTQHTAFSYLAKRF----------GLNQLGIAGISPEQEPSP----RQLTEIQEFVKTYKVKTIFTESNASSKVAE 242 (284)
T ss_dssp CCCEEEEESCCHHHHHHT----------TCCEEEEECSSTTCCCCS----HHHHHHHHHHHHTTCCCEEECSSSCCHHHH
T ss_pred CCEEEEECCchHHHHHHc----------CCEEeeccCCCCCCCCCH----HHHHHHHHHHHHcCCCEEEEeCCCCcHHHH
Confidence 344556667777666655 455444321111111012 2233333344555 88999998876 577
Q ss_pred HHHHHhCCceEEEc
Q 042709 117 EVAEAIGIARAAFV 130 (398)
Q Consensus 117 ~~A~~lgiP~v~~~ 130 (398)
.+|+..|++.+.+.
T Consensus 243 ~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 243 TLVKSTGVGLKTLN 256 (284)
T ss_dssp HHHSSSSCCEEECC
T ss_pred HHHHHcCCeEEEec
Confidence 88999999998654
No 441
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=25.21 E-value=1.2e+02 Score=23.54 Aligned_cols=38 Identities=5% Similarity=-0.016 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMK--LATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~--La~~L~~rGh~Vt~~~~~~ 49 (398)
...+++..+..|+...+.. +++.|.++|+.|..+-.+.
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 71 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTT
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCC
Confidence 4456666667788887777 5999999999998876544
No 442
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=25.20 E-value=67 Score=28.09 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGI--DVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 48 (398)
.++|+|+-.+..| ..+|+.|+++|| +|+.+...
T Consensus 33 ~~kI~IIG~G~mG-----~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMG-----GSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHH-----HHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCCCEEEEEECC
Confidence 3799999877655 467899999999 88877654
No 443
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=25.16 E-value=77 Score=24.69 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
|+++.|++.-.++.|=..-.-.|++.|.+.|++..++....
T Consensus 1 M~~~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~i~~~~ 41 (192)
T 1kht_A 1 MKNKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGS 41 (192)
T ss_dssp --CCEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCcceEEEehHH
Confidence 56678999999999999999999999999997777776543
No 444
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=25.13 E-value=33 Score=29.92 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 22 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECCS
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 4788888776544 67899999999999998653
No 445
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=25.09 E-value=1.5e+02 Score=21.82 Aligned_cols=50 Identities=10% Similarity=0.043 Sum_probs=31.5
Q ss_pred cCCceecccCccchhhHHHhhcccee-e-EEEecCCCCCCcCHHHHHHHHHHHhcCHHH
Q 042709 305 MGVPFLCWPSFADQHHNRNYICDVWK-I-GVQLLPDENGIITRQEIQINVKALLKNDGI 361 (398)
Q Consensus 305 ~GvP~v~~P~~~DQ~~na~~~~~~~g-~-g~~l~~~~~~~~~~~~l~~ai~~~l~~~~~ 361 (398)
..+|++++--..|.......+ + .| + +.-. ..++.++|.++|+.++....+
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~-----KP~~~~~L~~~i~~~l~~~~~ 126 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLN-----KPCQMSDIKAAINAGIKQYDL 126 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEE-----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEc-----CCCCHHHHHHHHHHHHHHHHH
Confidence 466777665544444333333 3 36 4 4444 458999999999999975443
No 446
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.07 E-value=60 Score=26.08 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.+.+++..+..|+..-+..+++.|.++|+.|..+-.+
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 58 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFS 58 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 34566667777788888899999999999998776543
No 447
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.04 E-value=50 Score=29.98 Aligned_cols=31 Identities=19% Similarity=0.247 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+++-.+..| +..|..|+++|++|+++=-
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 467777776655 7789999999999999844
No 448
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=25.02 E-value=59 Score=26.59 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.++++.++ |-+ =..+++.|.++||+|+.+.-.
T Consensus 6 k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 445555443 422 467899999999999887653
No 449
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=24.97 E-value=83 Score=23.23 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=33.6
Q ss_pred cCCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 042709 336 LPDENGIITRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVL 396 (398)
Q Consensus 336 ~~~~~~~~~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 396 (398)
+.++++.++.+++.+.+..++..+--.+.+.++-..+-......|...-..++|++.+.+.
T Consensus 85 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 85 DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred CCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 4455688999999999988654321122223322221111233455445567777766543
No 450
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=24.93 E-value=50 Score=31.79 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=29.0
Q ss_pred ccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc
Q 042709 5 VQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEF 49 (398)
Q Consensus 5 ~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~ 49 (398)
..+.|.+++|+++-.+..| +..|..|+++ |++|+++....
T Consensus 30 ~~~~~~~~~VvIIGgG~AG-----l~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 30 DKDRWGSRKIVVVGGVAGG-----ASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp ----CCCCEEEEECCSHHH-----HHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCcccCCCEEEECCcHHH-----HHHHHHHHhhCcCCCEEEEECCC
Confidence 3456778999999887655 6778888887 99999997654
No 451
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=24.83 E-value=62 Score=28.93 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=31.1
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 12 PHVLVIP--FPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 12 ~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
||++.+. -|+-|=..-.+.||..|+++|++|.++-....
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q 41 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQ 41 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCC
Confidence 3455333 37889999999999999999999999976543
No 452
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=24.71 E-value=88 Score=25.58 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=27.3
Q ss_pred EEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 13 HVLVIPFPALGH--VAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 13 ~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..+++..+..|+ ..-+..+++.|.++|++|..+--+
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 455666666677 667788999999999999876544
No 453
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.69 E-value=59 Score=26.96 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=24.7
Q ss_pred cCC-ccEEEecCcchhHHHHHHHhCCceEEEcC
Q 042709 100 TEC-TACVIADISVGWALEVAEAIGIARAAFVP 131 (398)
Q Consensus 100 ~~~-pD~vi~D~~~~~~~~~A~~lgiP~v~~~~ 131 (398)
+.. .|+||.|.. ...+|+++|+|.+.+.+
T Consensus 151 ~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 151 KANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 345 999999954 78999999999999884
No 454
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=24.69 E-value=45 Score=26.88 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=20.7
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 12 PHVLVIP-FPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 12 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
||||++. .|-.+.-.-.-++++.+.+.|++|+++-
T Consensus 2 mkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 2 PKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 6777554 4543322234456677777788877754
No 455
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=24.67 E-value=1.1e+02 Score=25.88 Aligned_cols=34 Identities=15% Similarity=0.010 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|++....
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777766543 3467899999999999887653
No 456
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=24.67 E-value=33 Score=29.02 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=24.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe-EEEEeC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGID-VTFVNT 47 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~-Vt~~~~ 47 (398)
.+++|+|.++-.+..|. .+++.|.+.||+ |+++..
T Consensus 7 ~~~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLAT-----NLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp CGGGCCEEEECCSHHHH-----HHHHHHHHHTCCEEEEECS
T ss_pred CCCCCeEEEEcCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 33457999997765553 468888899999 666543
No 457
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=24.62 E-value=1.3e+02 Score=24.21 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=42.9
Q ss_pred HHHHHHhCCCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCC-C-CCCCCCCCCCHHHHHhhchhhccCCccEEEe
Q 042709 31 LATKIAEHGIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPD-G-LDLQADEREDPHKLMTEDPQADTECTACVIA 108 (398)
Q Consensus 31 La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~ 108 (398)
.|++|.+.|..||+++.......+.+.. .++..+-+.. . ...+. ++.
T Consensus 22 ta~eL~~~gI~vtlI~Dsa~~~~m~~~~--------~~Vd~VivGAd~v~~nG~-----------------------v~n 70 (191)
T 1w2w_B 22 TAYELVYDKIPSTLITDSSIAYRIRTSP--------IPIKAAFVGADRIVRNGD-----------------------TAN 70 (191)
T ss_dssp HHHHHHHHTCCBEEBCGGGHHHHHHHCS--------SCEEEEEECCSEECTTSC-----------------------EEE
T ss_pred HHHHHHHcCCCEEEEechHHHHHHHhCC--------CCCCEEEECccEEecCCC-----------------------EEe
Confidence 5999999999999998766555444320 0155544431 1 11110 111
Q ss_pred cCcchhHHHHHHHhCCceEEEcCCc
Q 042709 109 DISVGWALEVAEAIGIARAAFVPFG 133 (398)
Q Consensus 109 D~~~~~~~~~A~~lgiP~v~~~~~~ 133 (398)
-.-+.....+|+.+|||++......
T Consensus 71 kiGT~~~Al~Ak~~~vPf~V~a~~~ 95 (191)
T 1w2w_B 71 KIGTLQLAVICKQFGIKFFVVAPKT 95 (191)
T ss_dssp ETTHHHHHHHHHHHTCEEEEECCGG
T ss_pred cccHHHHHHHHHHcCCCEEEecccc
Confidence 1122346788999999999876544
No 458
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=24.62 E-value=56 Score=28.03 Aligned_cols=35 Identities=9% Similarity=0.171 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC---eEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGI---DVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh---~Vt~~~~~ 48 (398)
|+++||.|+-.+..| ..+++.|.++|| +|+++...
T Consensus 1 M~~~~I~iIG~G~mG-----~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 1 MNTSNITFIGGGNMA-----RNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp -CCSCEEEESCSHHH-----HHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCCEEEEEcccHHH-----HHHHHHHHHCCCCCCeEEEEeCC
Confidence 566899999776555 467889999999 89887653
No 459
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=24.53 E-value=60 Score=24.44 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=30.0
Q ss_pred EEE-EEcCCCccCHHH--HHHHHHHHHhCCCeEEEEeCccchHHH
Q 042709 13 HVL-VIPFPALGHVAP--LMKLATKIAEHGIDVTFVNTEFIHAKI 54 (398)
Q Consensus 13 ~il-~~~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~~~~~~v 54 (398)
|++ ++..+.+|+... .+.+|..+...||+|.++-..+.....
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~ 51 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQL 51 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHH
Confidence 455 445555676555 477799999999999999887765444
No 460
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=24.52 E-value=64 Score=27.81 Aligned_cols=40 Identities=23% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 11 QPHVLVIPF--PALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 11 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
+.|+++++. |+.|=..-...||..|+++|.+|.++-....
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 455654443 6889999999999999999999999977543
No 461
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=24.52 E-value=80 Score=20.68 Aligned_cols=27 Identities=0% Similarity=0.055 Sum_probs=22.0
Q ss_pred CCcCHHHHHHHHHHHhcCH-HHHHHHHH
Q 042709 341 GIITRQEIQINVKALLKND-GIKGNSLK 367 (398)
Q Consensus 341 ~~~~~~~l~~ai~~~l~~~-~~~~~a~~ 367 (398)
...+.++|.+||..+.++. +++..|+.
T Consensus 12 r~Yte~~L~~Ai~aVr~g~mS~~~Aak~ 39 (70)
T 2cob_A 12 RQYNSEILEEAISVVMSGKMSVSKAQSI 39 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred cccCHHHHHHHHHHHHcCCccHHHHHHH
Confidence 5689999999999999884 66666665
No 462
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=24.45 E-value=86 Score=25.68 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGH--VAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..++++..+..|+ ..-+..+++.|.++|+.|..+-.+.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 85 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNG 85 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcccc
Confidence 4455566666655 5668899999999999998876543
No 463
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=24.45 E-value=41 Score=29.48 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 48 (398)
++||.++-.+..|.. +|..|+++|| +|+++...
T Consensus 4 ~~kI~VIGaG~~G~~-----ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGN-----IAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHH-----HHHHHHhCCCceEEEEeCC
Confidence 478999876555543 8888999999 98888654
No 464
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=24.39 E-value=50 Score=28.15 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+|+-.+..|. .+++.|.+ ||+|+++..
T Consensus 2 ~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 6899998877775 46888999 999988764
No 465
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.35 E-value=46 Score=28.15 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=26.2
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 15 LVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 15 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++.++..|+-.-+..+++.|+++|++|..+--+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~ 87 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLT 87 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 3445676777777888999999999998876543
No 466
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=24.25 E-value=3.2e+02 Score=23.54 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=59.9
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc--chHHHHHhhcccccCCCCCeEEEEcCCCCC
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEF--IHAKIIASMQGKAENSSSQIMLVSIPDGLD 79 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (398)
++...-+++||+++..+. || -+.+|..+-.+- ..+|..+.+.. .....++. |+.+..+|....
T Consensus 88 ~l~~~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~ 154 (292)
T 3lou_A 88 AIHDVAARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH----------GLPFRHFPITAD 154 (292)
T ss_dssp EEEETTSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCCSS
T ss_pred EeeccCCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCcC
Confidence 344445578999887765 65 344555554442 36777766643 23333333 788888764321
Q ss_pred CCCCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCC
Q 042709 80 LQADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~ 132 (398)
+-..+-..+.+.+++. ||+||.=.+.. -...+-+.+.-.++=+.++
T Consensus 155 -------~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 155 -------TKAQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp -------CHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -------CHHHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 1111222333333454 99999887753 4555666665556554443
No 467
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=24.19 E-value=61 Score=27.99 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=22.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|++|+|+++- +.|.+= ..|++.|.++||+|+.+.
T Consensus 1 M~~~~ilVtG--atG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAG--HRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp -CCEEEEEET--TTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCCCEEEEEC--CCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 4456776653 445442 467899999999988765
No 468
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.14 E-value=89 Score=27.66 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=25.1
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEH-GIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 48 (398)
.|++|+|+++- +.|.+= ..|++.|.++ ||+|+.++-.
T Consensus 21 ~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 21 SMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp --CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred ccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 35567877654 334433 5688999998 9999998754
No 469
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.04 E-value=97 Score=24.94 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=17.3
Q ss_pred HHHHHHHHH-hCCCeEEEEeCc
Q 042709 28 LMKLATKIA-EHGIDVTFVNTE 48 (398)
Q Consensus 28 ~l~La~~L~-~rGh~Vt~~~~~ 48 (398)
=..+++.|. ++||+|+.++-.
T Consensus 18 G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 18 AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHHhcCCceEEEEecC
Confidence 367899999 899999988754
No 470
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=24.03 E-value=98 Score=27.19 Aligned_cols=36 Identities=17% Similarity=-0.009 Sum_probs=25.7
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|++++|++.- +.|.+ =..|++.|.++||+|+.+.-
T Consensus 6 ~~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 6 FWQGKRVFVTG--HTGFK--GGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp HHTTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred hhCCCEEEEEC--CCchH--HHHHHHHHHhCCCeEEEEeC
Confidence 35667777653 44544 35678999999999998875
No 471
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=24.02 E-value=37 Score=29.79 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+..+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 1 m~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSG-----LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CEEEEEEEECCSHHH-----HHHHHHHHHSSCCEEEECCS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 444678888776544 67888999999999999754
No 472
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=24.01 E-value=39 Score=29.57 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=41.5
Q ss_pred ccccCCCCcceEEec-CCcchHHHHHhcCCceecc--cCccchhhHHHhhccceeeEEEecCCCCCCcCHHHHHHHHHHH
Q 042709 279 ENDLGHPSIAWFLSH-CGWNSTMEGLSMGVPFLCW--PSFADQHHNRNYICDVWKIGVQLLPDENGIITRQEIQINVKAL 355 (398)
Q Consensus 279 ~~lL~~~~~~~~ItH-gG~~s~~eal~~GvP~v~~--P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~~~l~~ai~~~ 355 (398)
..+++++++ +|+. .|.-.+ |...|+|+|++ |.... .++-. ... ..-+.-+..--..++++++.+++.++
T Consensus 248 ~ali~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~--~~~P~-~~~-~~~~~~~~~cm~~I~~~~V~~~i~~~ 319 (326)
T 2gt1_A 248 ARVLAGAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPG--LIGGY-GKN-QMVCRAPGNELSQLTANAVKQFIEEN 319 (326)
T ss_dssp HHHHHTCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHH--HHCCC-SSS-EEEEECGGGCGGGCCHHHHHHHHHHT
T ss_pred HHHHHhCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChh--hcCCC-CCC-ceEecCCcccccCCCHHHHHHHHHHH
Confidence 457888888 9999 444333 55699999998 32111 11110 010 01111011011468999999999999
Q ss_pred hcC
Q 042709 356 LKN 358 (398)
Q Consensus 356 l~~ 358 (398)
|++
T Consensus 320 l~~ 322 (326)
T 2gt1_A 320 AEK 322 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 975
No 473
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=23.99 E-value=50 Score=24.64 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=27.0
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCccchHHHHH
Q 042709 23 GHVAPLMKLATKIAEHGIDVTFVNTEFIHAKIIA 56 (398)
Q Consensus 23 GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 56 (398)
||++..-.|-+.|.++|.+..+++.+.+...+..
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~YlTG 34 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceeecC
Confidence 6888888899999999999999999888777653
No 474
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=23.95 E-value=91 Score=25.84 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 355666665532 3467899999999999887643
No 475
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=23.94 E-value=1.2e+02 Score=25.56 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=26.4
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 7 LSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 7 ~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
..|-+.|+++++..+.| -=.++|+.|+++|++|.+.....
T Consensus 20 ~~~~~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~~ 59 (269)
T 3gk3_A 20 GSMQAKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHSER 59 (269)
T ss_dssp ----CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEECSC
T ss_pred hhhhcCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCCc
Confidence 34545677777776532 23678999999999999887433
No 476
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=23.89 E-value=94 Score=27.27 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|++++|++.- +.|-+ =..|++.|.++||+|+.++-
T Consensus 25 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLITG--VAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp HSCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4567777653 33433 35688999999999999875
No 477
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=23.87 E-value=1.3e+02 Score=25.72 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=23.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|+++++ +++..+ |- -=.++++.|+++|++|+++.-.
T Consensus 24 l~~k~v-lITGas-gg--iG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 24 FQGKVA-FITGGG-TG--LGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTCEE-EEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEE-EEECCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 344544 444433 32 2467899999999999987654
No 478
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=23.82 E-value=1.1e+02 Score=25.23 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=21.9
Q ss_pred CEEEEE-cCCCccCHHHH--HHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVI-PFPALGHVAPL--MKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~-~~~~~GH~~p~--l~La~~L~~rGh~Vt~~~~ 47 (398)
||||++ ..|-.+-.+-. -.+++.|.++||+|.++--
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 677754 44544433332 2356677778999988754
No 479
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=23.81 E-value=1.2e+02 Score=24.66 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCcc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGI-DVTFVNTEF 49 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~ 49 (398)
|+++-|+|--.++.|=..-.-.|++.|..+|+ .|.+.-.|.
T Consensus 1 m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~~v~~~rep~ 42 (213)
T 4tmk_A 1 MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPG 42 (213)
T ss_dssp -CCCEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCCcceeeeCCC
Confidence 67777888888999999999999999999998 776555443
No 480
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.80 E-value=81 Score=27.23 Aligned_cols=34 Identities=3% Similarity=0.050 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++|+++ ++.|.+= ..++++|.++||+|+.++-..
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 5 EKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 566655 3445443 467899999999999987653
No 481
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.77 E-value=96 Score=26.24 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 356666665543 346789999999999988765
No 482
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=23.77 E-value=1e+02 Score=26.89 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042709 13 HVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVN 46 (398)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 46 (398)
|+++++..+.| -=.++|+.|+++|++|++..
T Consensus 10 k~~lVTGas~G---IG~~~a~~La~~Ga~Vv~~~ 40 (319)
T 1gz6_A 10 RVVLVTGAGGG---LGRAYALAFAERGALVVVND 40 (319)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEc
Confidence 56666665432 34678999999999999863
No 483
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=23.70 E-value=1.5e+02 Score=25.61 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=30.2
Q ss_pred CEEEEEcCCC-------------ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPA-------------LGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~-------------~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
+||+|+.... .-+..=+......|.+.|++|+++++..
T Consensus 49 kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g 99 (291)
T 1n57_A 49 HKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISG 99 (291)
T ss_dssp CEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5899888764 2455667788889999999999999754
No 484
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=23.69 E-value=3.2e+02 Score=22.78 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 11 ~k~~lVTGas~G---IG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 11 GRVAFITGAARG---QGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCccH---HHHHHHHHHHHcCCEEEEEec
Confidence 356666665532 236789999999999998753
No 485
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=23.69 E-value=64 Score=27.60 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
++|+++ ++.|.+= ..++++|.++||+|+.++-..
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 566665 3445442 467899999999999887543
No 486
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=23.61 E-value=1.1e+02 Score=25.72 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 4 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGASGG---IGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEECC
Confidence 456777765532 2368899999999999887643
No 487
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.59 E-value=64 Score=26.93 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=22.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
||+++++..+.| + =.++++.|+++|++|+++.-
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 355666665432 2 35789999999999988653
No 488
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=23.57 E-value=68 Score=28.79 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=32.3
Q ss_pred CCCEEEEE-c-CCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 10 RQPHVLVI-P-FPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 10 ~~~~il~~-~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+++|++.+ . -++.|=..-...||..|+++|++|.++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 35666644 3 478899999999999999999999999865
No 489
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=23.53 E-value=1e+02 Score=25.44 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-.
T Consensus 9 ~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGG---IGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 455666654432 3468899999999999887653
No 490
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=23.50 E-value=1.3e+02 Score=20.09 Aligned_cols=50 Identities=8% Similarity=0.138 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 042709 344 TRQEIQINVKALLKNDGIKGNSLKLKEIARKILVEGGSSFRKFDSFISQIKVL 396 (398)
Q Consensus 344 ~~~~l~~ai~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 396 (398)
|.++....+.....++...+++.++++-+-.- .-.....+..++..+..+
T Consensus 19 s~~~Y~~~l~~y~~~~~a~eA~~~lK~C~D~l---s~e~r~~i~~~l~kI~~S 68 (77)
T 1ccd_A 19 SESNYEAALKPFNPASDLQNAGTQLKRLVDTL---PQETRINIVKLTEKILTS 68 (77)
T ss_dssp CHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHS---CHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHcC
Confidence 78888889988888999999999999888752 222356677777766554
No 491
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=23.49 E-value=1.6e+02 Score=24.17 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
+.|+++++..+.| -=.++++.|+++|++|++....
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 3466777776644 3468899999999999886443
No 492
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=23.36 E-value=61 Score=29.46 Aligned_cols=31 Identities=13% Similarity=0.203 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
|+|+++-.+..| +..|..|+++|++|+++=-
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 467777776655 7889999999999999743
No 493
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.36 E-value=72 Score=26.76 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=28.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
...+++..+..|+..-...+++.|.++|++|..+-.+.
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 34555555666777778899999999999998876653
No 494
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=23.33 E-value=1.1e+02 Score=25.29 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEFI 50 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 50 (398)
++.++||++-.+ ......++.|.+.|.+|+++++...
T Consensus 29 L~gk~VLVVGgG-----~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 29 LKGRSVLVVGGG-----TIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp CTTCCEEEECCS-----HHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred cCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 367889988664 4567788999999999999998644
No 495
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.32 E-value=1.1e+02 Score=25.91 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042709 12 PHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNT 47 (398)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 47 (398)
.|+++++..+.| -=.++|+.|+++|++|+++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 456666665543 346889999999999998764
No 496
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.26 E-value=3.5e+02 Score=23.20 Aligned_cols=112 Identities=7% Similarity=-0.015 Sum_probs=60.9
Q ss_pred cccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchHHHHHhhcccccCCCCCeEEEEcCCCCCCC
Q 042709 4 QVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEH--GIDVTFVNTEFIHAKIIASMQGKAENSSSQIMLVSIPDGLDLQ 81 (398)
Q Consensus 4 ~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (398)
+++..-+++||+++..+. || -+.+|..+-.+- ..+|..+.+..-.. +.+. +...|+.+..+|...
T Consensus 81 ~l~~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~------A~~~gIp~~~~~~~~--- 147 (287)
T 3nrb_A 81 WFRPRTDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV------SLVGDIPFHYLPVTP--- 147 (287)
T ss_dssp EEEETTCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC------CCCTTSCEEECCCCG---
T ss_pred EeeccCCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH------HHHcCCCEEEEeccC---
Confidence 344444578999887765 54 344555554443 36777776644321 2111 223478887775321
Q ss_pred CCCCCCHHHHHhhchhhccCC-ccEEEecCcch-hHHHHHHHhCCceEEEcCC
Q 042709 82 ADEREDPHKLMTEDPQADTEC-TACVIADISVG-WALEVAEAIGIARAAFVPF 132 (398)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-pD~vi~D~~~~-~~~~~A~~lgiP~v~~~~~ 132 (398)
.+-..+-..+.+.+++. ||+||.=.+.. -...+-+.+.-.++=+.++
T Consensus 148 ----~~r~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 ----ATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ----GGHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----cchhhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 01111222333333454 99999987753 5566666666666665554
No 497
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=23.24 E-value=1.5e+02 Score=26.57 Aligned_cols=45 Identities=9% Similarity=0.162 Sum_probs=29.8
Q ss_pred cccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 042709 2 ETQVQLSCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTEF 49 (398)
Q Consensus 2 ~~~~~~~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 49 (398)
.++....| +||+|+.+++. -..-+....+.|.+.|++|+++++..
T Consensus 3 ~~~~~~~m--kkV~ILl~dgf-~~~El~~p~dvL~~Ag~~v~vvS~~~ 47 (365)
T 3fse_A 3 TNHNNSGK--KKVAILIEQAV-EDTEFIIPCNGLKQAGFEVVVLGSRM 47 (365)
T ss_dssp ----------CEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCc--eEEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 33444444 78999988865 34556667789999999999999864
No 498
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=23.23 E-value=53 Score=28.88 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 11 QPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
..+|+++-.+..| +..|..|+++|++|+++--.
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4578888877655 77899999999999998654
No 499
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=23.18 E-value=1.1e+02 Score=25.27 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=24.5
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 8 SCRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 8 ~m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
.|+++++ +++.. .|.+ =..+++.|+++|++|+++.-.
T Consensus 4 ~l~~k~v-lVTGa-sggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRV-LITGS-SQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEE-EETTC-SSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEE-EEeCC-CChH--HHHHHHHHHHCCCEEEEECCC
Confidence 3555554 44443 3433 357899999999999988653
No 500
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=23.12 E-value=82 Score=26.55 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 042709 9 CRQPHVLVIPFPALGHVAPLMKLATKIAEHGIDVTFVNTE 48 (398)
Q Consensus 9 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 48 (398)
|++++|+++-.....+...+ .+.|.++|++|+++...
T Consensus 1 m~~~~vliiqh~~~e~~~~i---~~~l~~~G~~v~v~~~~ 37 (250)
T 3m3p_A 1 MSLKPVMIIQFSASEGPGHF---GDFLAGEHIPFQVLRMD 37 (250)
T ss_dssp -CCCCEEEEESSSSCCCHHH---HHHHHHTTCCEEEEEGG
T ss_pred CCCCeEEEEECCCCCCHHHH---HHHHHHCCCeEEEEecc
Confidence 56788998876665665544 44578999999998754
Done!