BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042714
DDYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVD
VFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRM
PPFESTAVIDGCGMSGGRAAREKIRGLLR

High Scoring Gene Products

Symbol, full name Information P value
PLAT2
AT2G22170
protein from Arabidopsis thaliana 5.1e-35
PLAT1
AT4G39730
protein from Arabidopsis thaliana 2.8e-34
PLAT3
AT5G65158
protein from Arabidopsis thaliana 1.2e-26
ATS3
AT5G07190
protein from Arabidopsis thaliana 5.4e-08
Loxhd1
lipoxygenase homology domains 1
protein from Mus musculus 8.1e-06
LOXHD1
Lipoxygenase homology domain-containing protein 1
protein from Homo sapiens 1.2e-05
AT2G41475 protein from Arabidopsis thaliana 3.6e-05
LOC504986
Uncharacterized protein
protein from Bos taurus 0.00066

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042714
        (149 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060410 - symbol:PLAT2 "AT2G22170" species:370...   379  5.1e-35   1
TAIR|locus:2135217 - symbol:PLAT1 "AT4G39730" species:370...   372  2.8e-34   1
TAIR|locus:1009023406 - symbol:PLAT3 "AT5G65158" species:...   300  1.2e-26   1
TAIR|locus:2182865 - symbol:ATS3 "AT5G07190" species:3702...   125  5.4e-08   1
MGI|MGI:1914609 - symbol:Loxhd1 "lipoxygenase homology do...   120  8.1e-06   1
UNIPROTKB|Q8IVV2 - symbol:LOXHD1 "Lipoxygenase homology d...   118  1.2e-05   1
TAIR|locus:4515102981 - symbol:AT2G41475 "AT2G41475" spec...   105  3.6e-05   1
UNIPROTKB|E1BC86 - symbol:LOC504986 "Uncharacterized prot...   108  0.00066   1


>TAIR|locus:2060410 [details] [associations]
            symbol:PLAT2 "AT2G22170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=RCA] InterPro:IPR001024 Pfam:PF01477 PROSITE:PS50095
            GO:GO:0009507 EMBL:CP002685 GO:GO:0016020 GO:GO:0009579
            EMBL:AC007168 Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            HOGENOM:HOG000239495 ProtClustDB:CLSN2685872 EMBL:BT002824
            EMBL:BT004384 IPI:IPI00537274 PIR:G84609 RefSeq:NP_565527.1
            UniGene:At.14443 UniGene:At.67086 ProteinModelPortal:Q9SIE7
            SMR:Q9SIE7 PRIDE:Q9SIE7 EnsemblPlants:AT2G22170.1 GeneID:816751
            KEGG:ath:AT2G22170 TAIR:At2g22170 InParanoid:Q9SIE7 OMA:VYIRTGS
            PhylomeDB:Q9SIE7 ArrayExpress:Q9SIE7 Genevestigator:Q9SIE7
            Uniprot:Q9SIE7
        Length = 183

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 67/133 (50%), Positives = 95/133 (71%)

Query:     4 CVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWG-LMGPHHDYYERGNVDVF 62
             CVYT +++TGS  K+GTDS IS  + D  G  + + +L++WG LMGP ++YYERGN+D+F
Sbjct:    31 CVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNYYERGNLDIF 90

Query:    63 SGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMPP 122
             SG+ PC+ SP+C+LN++SDGSG    WY  YVEVT+ G H  C   +F V+QWL+S   P
Sbjct:    91 SGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVEQWLASDTSP 150

Query:   123 FESTAVIDGCGMS 135
             +E +AV + C +S
Sbjct:   151 YELSAVRNNCPVS 163


>TAIR|locus:2135217 [details] [associations]
            symbol:PLAT1 "AT4G39730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005773
            "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005829 "cytosol" evidence=RCA] [GO:0006623 "protein targeting
            to vacuole" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=RCA] InterPro:IPR001024 Pfam:PF01477 PROSITE:PS50095
            GO:GO:0005886 GO:GO:0005774 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL022605 EMBL:AL161595 GO:GO:0009535 Gene3D:2.60.60.20
            InterPro:IPR008976 SUPFAM:SSF49723 eggNOG:NOG148171 EMBL:AY079024
            EMBL:AY093757 EMBL:AY088352 IPI:IPI00530651 PIR:T05010
            RefSeq:NP_195683.1 UniGene:At.2293 ProteinModelPortal:O65660
            SMR:O65660 PaxDb:O65660 PRIDE:O65660 EnsemblPlants:AT4G39730.1
            GeneID:830128 KEGG:ath:AT4G39730 TAIR:At4g39730
            HOGENOM:HOG000239495 InParanoid:O65660 OMA:LPSPICA PhylomeDB:O65660
            ProtClustDB:CLSN2685872 ArrayExpress:O65660 Genevestigator:O65660
            Uniprot:O65660
        Length = 181

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 67/133 (50%), Positives = 92/133 (69%)

Query:     1 DDYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSW-GLMGPHHDYYERGNV 59
             D  CVYT Y++TGS  K+GTDS IS  + D  G  + + +L++W GLMGP ++Y+ERGN+
Sbjct:    26 DPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDYIGIKNLQAWAGLMGPDYNYFERGNL 85

Query:    60 DVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSR 119
             D+FSGR PC+ SPIC LN++SDGSG    WY  YVE+T+ G H  C    F ++QWL++ 
Sbjct:    86 DIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYVEITTAGVHAQCSTQDFEIEQWLATD 145

Query:   120 MPPFESTAVIDGC 132
               P+E TAV + C
Sbjct:   146 TSPYELTAVRNNC 158


>TAIR|locus:1009023406 [details] [associations]
            symbol:PLAT3 "AT5G65158" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001024 Pfam:PF01477 PROSITE:PS50095
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB013395
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            ProtClustDB:CLSN2685872 IPI:IPI00657213 RefSeq:NP_001032146.1
            UniGene:At.63376 ProteinModelPortal:Q2V2V3 SMR:Q2V2V3
            EnsemblPlants:AT5G65158.1 GeneID:3771559 KEGG:ath:AT5G65158
            TAIR:At5g65158 eggNOG:NOG264732 HOGENOM:HOG000129983 OMA:ESRRRSC
            PhylomeDB:Q2V2V3 Genevestigator:Q2V2V3 Uniprot:Q2V2V3
        Length = 104

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 54/103 (52%), Positives = 70/103 (67%)

Query:    24 ISIALGDAVGRSVWVPDLKSWG-LMGPHHDYYERGNVDVFSGRGPCIGSPICNLNVSSDG 82
             +S+ L D+ G+   + DL SWG LMGP HDY+ERGN+D+FSG G C+  P+C +N++SDG
Sbjct:     1 MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query:    83 SGMFPSWYCEYVEVT-STGPHRSCDQSAFYVDQWLSSRMPPFE 124
             SG    WYC YVEVT S    RSC Q  F V+QWL+    P+E
Sbjct:    61 SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYE 103


>TAIR|locus:2182865 [details] [associations]
            symbol:ATS3 "AT5G07190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA;TAS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0016020 "membrane" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0010162 "seed dormancy
            process" evidence=RCA] EMBL:CP002688 GO:GO:0031225 EMBL:AL163652
            GO:GO:0009793 InterPro:IPR008976 SUPFAM:SSF49723 InterPro:IPR010417
            Pfam:PF06232 ProtClustDB:CLSN2687047 IPI:IPI00523243 PIR:T48490
            RefSeq:NP_196336.1 UniGene:At.5049 ProteinModelPortal:Q9LYP6
            STRING:Q9LYP6 PRIDE:Q9LYP6 ProMEX:Q9LYP6 EnsemblPlants:AT5G07190.1
            GeneID:830610 KEGG:ath:AT5G07190 TAIR:At5g07190 OMA:SIEIYSE
            PhylomeDB:Q9LYP6 Genevestigator:Q9LYP6 Uniprot:Q9LYP6
        Length = 213

 Score = 125 (49.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 34/98 (34%), Positives = 48/98 (48%)

Query:     4 CVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLM-GPHHDYYERGNVDVF 62
             C YT+ V T       T  +ISI  GDA G  V+ P L   GL+ GP      + + + F
Sbjct:    34 CPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLG--GLVRGPGG--LGKCSTNTF 89

Query:    63 SGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTG 100
               RG C+  PIC+L ++ +G      W  E +E+ S G
Sbjct:    90 QVRGQCLNDPICSLYINRNGPD---GWVPESIEIYSEG 124


>MGI|MGI:1914609 [details] [associations]
            symbol:Loxhd1 "lipoxygenase homology domains 1"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0007605 "sensory perception of sound"
            evidence=ISO;IMP] [GO:0032420 "stereocilium" evidence=IDA]
            [GO:0042995 "cell projection" evidence=IEA] InterPro:IPR001024
            Pfam:PF01477 PROSITE:PS50095 SMART:SM00308 MGI:MGI:1914609
            GO:GO:0007605 GO:GO:0032420 Gene3D:2.60.60.20 InterPro:IPR008976
            SUPFAM:SSF49723 CTD:125336 eggNOG:NOG148171 OrthoDB:EOG4QVCB6
            EMBL:FJ750876 EMBL:AK007091 IPI:IPI00947593 RefSeq:NP_766422.2
            UniGene:Mm.380247 ProteinModelPortal:C8YR32 SMR:C8YR32
            STRING:C8YR32 Ensembl:ENSMUST00000096547 GeneID:240411
            KEGG:mmu:240411 UCSC:uc012bfd.1 GeneTree:ENSGT00390000018830
            HOGENOM:HOG000030975 InParanoid:Q8BMY5 NextBio:384574 Bgee:C8YR32
            Uniprot:C8YR32
        Length = 2068

 Score = 120 (47.3 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 36/117 (30%), Positives = 55/117 (47%)

Query:     2 DYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDV 61
             ++  YT+ VKT   + +GTD+ + I +    G S  +  LK       + + +ER N D 
Sbjct:  1678 EWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLA-LKQ----SANWNKFERNNTDT 1732

Query:    62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQS-AFYVDQWLS 117
             F+         +C L V  D  G+FP W+  YV+V       S D++  F  D WLS
Sbjct:  1733 FNFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDN----SRDETFRFQCDCWLS 1785


>UNIPROTKB|Q8IVV2 [details] [associations]
            symbol:LOXHD1 "Lipoxygenase homology domain-containing
            protein 1" species:9606 "Homo sapiens" [GO:0032420 "stereocilium"
            evidence=ISS] [GO:0007605 "sensory perception of sound"
            evidence=IMP] InterPro:IPR001024 Pfam:PF01477 PROSITE:PS50095
            SMART:SM00308 EMBL:CH471088 GO:GO:0007605 Orphanet:90636
            GO:GO:0032420 Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            EMBL:AK057232 EMBL:AK127869 EMBL:AC018931 EMBL:AC064800
            EMBL:AC091139 EMBL:BC041860 EMBL:BC047720 IPI:IPI00412603
            IPI:IPI00477676 IPI:IPI00788666 IPI:IPI00790612 IPI:IPI01009573
            RefSeq:NP_001138944.1 RefSeq:NP_001138945.1 RefSeq:NP_001166600.1
            RefSeq:NP_653213.6 UniGene:Hs.345877 ProteinModelPortal:Q8IVV2
            SMR:Q8IVV2 STRING:Q8IVV2 PhosphoSite:Q8IVV2 DMDM:294862503
            PRIDE:Q8IVV2 Ensembl:ENST00000300591 Ensembl:ENST00000398686
            Ensembl:ENST00000398705 Ensembl:ENST00000398722 GeneID:125336
            KEGG:hsa:125336 UCSC:uc002lcd.4 UCSC:uc002lce.4 UCSC:uc002lcg.1
            UCSC:uc010xcu.1 CTD:125336 GeneCards:GC18M044056 HGNC:HGNC:26521
            HPA:HPA042982 MIM:613072 MIM:613079 neXtProt:NX_Q8IVV2
            PharmGKB:PA134878065 eggNOG:NOG148171 HOVERGEN:HBG108091
            InParanoid:Q8IVV2 OrthoDB:EOG4QVCB6 ChiTaRS:Loxhd1
            GenomeRNAi:125336 NextBio:81532 ArrayExpress:Q8IVV2 Bgee:Q8IVV2
            CleanEx:HS_LOXHD1 Genevestigator:Q8IVV2 Uniprot:Q8IVV2
        Length = 1947

 Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 36/117 (30%), Positives = 55/117 (47%)

Query:     2 DYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDV 61
             ++  YT+ VKT   + +GTD+ + I +    G S  +  LK       + + +ER N D 
Sbjct:  1605 EWTSYTVAVKTSDILGAGTDANVFIIIFGENGDSGTLA-LKQ----SANWNKFERNNTDT 1659

Query:    62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSA-FYVDQWLS 117
             F+         +C L V  D  G+FP W+  YV+V       S D++  F  D WLS
Sbjct:  1660 FNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDN----SRDETFHFQCDCWLS 1712


>TAIR|locus:4515102981 [details] [associations]
            symbol:AT2G41475 "AT2G41475" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR001024 GO:GO:0009506 EMBL:CP002685
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723 EMBL:AK175164
            EMBL:AK175615 EMBL:AK175765 EMBL:AK221826 EMBL:AK221888
            EMBL:AK228257 IPI:IPI00521526 RefSeq:NP_001118501.1
            UniGene:At.43627 ProteinModelPortal:Q681K2 PRIDE:Q681K2
            EnsemblPlants:AT2G41475.1 GeneID:6240499 KEGG:ath:AT2G41475
            TAIR:At2g41475 OMA:CYLYLLR PhylomeDB:Q681K2 ProtClustDB:CLSN2925507
            Genevestigator:Q681K2 InterPro:IPR010417 Pfam:PF06232
            Uniprot:Q681K2
        Length = 179

 Score = 105 (42.0 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 30/93 (32%), Positives = 43/93 (46%)

Query:     4 CVYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFS 63
             C YT+ +KT     S T  KISI+ GD  G  V+V  L       P    +E+ + D + 
Sbjct:    48 CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDD-----PSSRTFEKCSSDTYK 102

Query:    64 GRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEV 96
               GPC+   +C L +   GS     W  E V++
Sbjct:   103 ISGPCMRD-VCYLYLLRQGSD---GWKPENVKI 131


>UNIPROTKB|E1BC86 [details] [associations]
            symbol:LOC504986 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0060674 "placenta blood vessel development"
            evidence=IEA] [GO:0050982 "detection of mechanical stimulus"
            evidence=IEA] [GO:0042994 "cytoplasmic sequestering of
            transcription factor" evidence=IEA] [GO:0032092 "positive
            regulation of protein binding" evidence=IEA] [GO:0031512 "motile
            primary cilium" evidence=IEA] [GO:0018105 "peptidyl-serine
            phosphorylation" evidence=IEA] [GO:0007507 "heart development"
            evidence=IEA] [GO:0007259 "JAK-STAT cascade" evidence=IEA]
            [GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006816 "calcium
            ion transport" evidence=IEA] [GO:0006611 "protein export from
            nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
            [GO:0002133 "polycystin complex" evidence=IEA] [GO:0001892
            "embryonic placenta development" evidence=IEA] [GO:0001822 "kidney
            development" evidence=IEA] [GO:0001502 "cartilage condensation"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0007218
            "neuropeptide signaling pathway" evidence=IEA] InterPro:IPR001611
            InterPro:IPR000203 InterPro:IPR000434 InterPro:IPR001024
            InterPro:IPR001304 Pfam:PF00059 Pfam:PF01477 Pfam:PF01825
            PRINTS:PR00500 PROSITE:PS50041 PROSITE:PS50095 PROSITE:PS50221
            PROSITE:PS51450 SMART:SM00034 SMART:SM00303 SMART:SM00308
            InterPro:IPR002889 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007507 GO:GO:0032092 GO:GO:0030246
            GO:GO:0007218 Gene3D:3.10.100.10 InterPro:IPR016186
            InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR000483
            InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007050
            GO:GO:0018105 GO:GO:0005261 GO:GO:0001822 GO:GO:0006816
            InterPro:IPR000372 SMART:SM00013 GO:GO:0001502 GO:GO:0006611
            GO:GO:0001892 GO:GO:0042994 GO:GO:0007259 GO:GO:0060674
            GO:GO:0031512 Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            Gene3D:2.60.40.670 InterPro:IPR022409 InterPro:IPR000601
            Pfam:PF00801 SMART:SM00089 SUPFAM:SSF49299 PROSITE:PS50093
            InterPro:IPR002859 Pfam:PF02010 Pfam:PF01822 PROSITE:PS51212
            InterPro:IPR013122 Pfam:PF08016 GO:GO:0050982 InterPro:IPR014010
            PROSITE:PS51111 GeneTree:ENSGT00700000104402 OMA:GQCNTDL
            GO:GO:0002133 InterPro:IPR006228 TIGRFAMs:TIGR00864
            EMBL:DAAA02057309 EMBL:DAAA02057310 IPI:IPI00688388
            Ensembl:ENSBTAT00000027480 Uniprot:E1BC86
        Length = 4301

 Score = 108 (43.1 bits), Expect = 0.00066, P = 0.00066
 Identities = 37/115 (32%), Positives = 53/115 (46%)

Query:     6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
             Y + VKTG G  SGT + + I L  A GRS     L   G        ++R ++DVF   
Sbjct:  3118 YEILVKTGWGRGSGTTAHVGIMLYGADGRSGH-RHLDGDGA-------FQRNSLDVFQIA 3169

Query:    66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRM 120
              P     +  + V  D  G+ P+W+ ++V V      RS   + F V+ WLS  M
Sbjct:  3170 TPHSLGRLWKIRVWHDNKGLSPAWFLQHVIVRDLQSARS---TFFLVNDWLSVEM 3221


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      149       149   0.00078  104 3  11 22  0.50    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  170 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.44u 0.12s 14.56t   Elapsed:  00:00:00
  Total cpu time:  14.44u 0.12s 14.56t   Elapsed:  00:00:00
  Start:  Fri May 10 20:31:53 2013   End:  Fri May 10 20:31:53 2013

Back to top