BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042714
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C8YR32|LOXH1_MOUSE Lipoxygenase homology domain-containing protein 1 OS=Mus musculus
GN=Loxhd1 PE=2 SV=1
Length = 2068
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 2 DYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRS--VWVPDLKSWGLMGPHHDYYERGNV 59
++ YT+ VKT + +GTD+ + I + G S + + +W + +ER N
Sbjct: 1678 EWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW-------NKFERNNT 1730
Query: 60 DVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQS-AFYVDQWLS 117
D F+ +C L V D G+FP W+ YV+V S D++ F D WLS
Sbjct: 1731 DTFNFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDN----SRDETFRFQCDCWLS 1785
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 6 YTLYVKTGSGIKSGTDSKISIAL----GDAVGRSVWVPD--LKSWGLMGPHHDYYERGNV 59
Y + VKTG + TDS++ I L D + + + V D LK DY+ERG V
Sbjct: 686 YHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVLLVSDNNLK---------DYFERGRV 736
Query: 60 DVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWL 116
D F+ IG+ I L + D +GM W+ V++ R Q F ++WL
Sbjct: 737 DEFTLETLNIGT-INRLVIGHDSTGMHAGWFLGSVQIRVP---RQGKQYTFPANRWL 789
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 1 DDYCVYTLYVKTGSGIKSGTDSKISIAL---GDAVGRSVWVPDLKSWGLMGPHHDYYERG 57
D +++ +KTG +GTD+ + I L D G ++ LKS + D +ER
Sbjct: 967 DKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDNNGMTL----LKS---SKTNSDKFERD 1019
Query: 58 NVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTS 98
++++F+ +G + + + D +G P W+ ++VEV +
Sbjct: 1020 SIEIFTVETLDLGD-LWKVRIGHDNTGKAPGWFVDWVEVDA 1059
Score = 36.2 bits (82), Expect = 0.074, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 53 YYERGNVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQS-AFY 111
++ER + F +G I + + D +G+ P W+C +V++ P + ++ F
Sbjct: 1148 FFERKSASRFIVELEDVGEIIEKIRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFP 1207
Query: 112 VDQWLSS 118
D+WL++
Sbjct: 1208 CDRWLAT 1214
Score = 36.2 bits (82), Expect = 0.080, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 5 VYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSG 64
+Y + V TG + GTDS I + L G + V + +ER D F
Sbjct: 1554 LYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQ-------LDKKKARFEREQNDTFIM 1606
Query: 65 RGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMPP-- 122
I +P + + DG G P W+ E + + + + D + FY WLS +
Sbjct: 1607 EILDI-APFTKMRIRIDGMGSRPEWFLERILLKNMN---TGDLTMFYYGDWLSQKKGKKT 1662
Query: 123 --FESTAVIDG 131
E AVIDG
Sbjct: 1663 LVCEICAVIDG 1673
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
Y + V TG +GT SKI + + A G K+ G + ++RG D+F
Sbjct: 298 YIVTVFTGDIRGAGTKSKIYLVMYGARGN-------KNSGKIFLEGGVFDRGRTDIFHID 350
Query: 66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSR 119
+ SP+ +++ G+ WYCE V + P Q+ F WL +
Sbjct: 351 LAVLLSPLSRVSIGHGNIGVNRGWYCEKVVILC--PFTGIQQT-FPCSNWLDEK 401
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
Y + V TG +GTD+ + + + A G D L + +ERG+ D F
Sbjct: 1951 YEVIVTTGYEPGAGTDANVFVTIFGANG------DTGKRELKQKMRNLFERGSTDRFFLE 2004
Query: 66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTST 99
+G + + + D SG + W E VEVT+T
Sbjct: 2005 TLELGE-LRKVRLEHDSSGYYSGWLVEKVEVTNT 2037
Score = 34.3 bits (77), Expect = 0.29, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 6 YTLYVKTGSGIKSGTDSKISIAL----GDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDV 61
Y + V TG I +GTD+ + I + GD R + D +E+G D
Sbjct: 174 YEIKVYTGDVIGAGTDADVFINIFGEYGDTGERR-----------LENEKDNFEKGAEDK 222
Query: 62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
F+ P +G + +NV + G W+ + + G R D F +++WL+
Sbjct: 223 FTLDAPDLGQ-LMKINVGHNNKGGSAGWFLSKIIIEDIGNKRKYD---FPLNRWLA 274
Score = 33.5 bits (75), Expect = 0.53, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 2 DYCVYTLYVKTGSGIKSGTDSKISIA----LGDAVGRSVWVPDLKSWGLMGPHHDYYERG 57
D +Y++ + TG+ +GTD+K+ I LGD R + + ++ + +E+G
Sbjct: 1253 DIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRT--------NKFEKG 1304
Query: 58 NVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
D F +G I + + D + WY E VE+ + D+ F +WLS
Sbjct: 1305 TADTFIIEAADLGV-IYKIKLRHDNTKWCADWYVEKVEIWNDTNE---DEFLFLCGRWLS 1360
>sp|Q8IVV2|LOXH1_HUMAN Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens
GN=LOXHD1 PE=2 SV=3
Length = 1947
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 2 DYCVYTLYVKTGSGIKSGTDSKISIALGDAVGRS--VWVPDLKSWGLMGPHHDYYERGNV 59
++ YT+ VKT + +GTD+ + I + G S + + +W + +ER N
Sbjct: 1605 EWTSYTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW-------NKFERNNT 1657
Query: 60 DVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQS-AFYVDQWLS 117
D F+ +C L V D G+FP W+ YV+V S D++ F D WLS
Sbjct: 1658 DTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDN----SRDETFHFQCDCWLS 1712
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 6 YTLYVKTGSGIKSGTDSKISIAL----GDAVGRSVWVPD--LKSWGLMGPHHDYYERGNV 59
Y + +KTG + TDS++ I L D + + + V D LK DY+ERG V
Sbjct: 408 YHISLKTGDVSGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLK---------DYFERGRV 458
Query: 60 DVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWL 116
D F+ IG+ I L + D +GM SW+ V++ R Q F ++WL
Sbjct: 459 DEFTLETLNIGN-INRLVIGHDSTGMHASWFLGSVQIRVP---RQGKQYTFPANRWL 511
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 1 DDYCVYTLYVKTGSGIKSGTDSKISIAL---GDAVGRSVWVPDLKSWGLMGPHHDYYERG 57
D +++ +KTG +GTD+ + I L D G ++ LKS + D +ER
Sbjct: 894 DKSTTFSVTIKTGVKKNAGTDANVFITLFGTQDDTGMTL----LKS---SKTNSDKFERD 946
Query: 58 NVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTS 98
++++F+ +G + + + D +G P W+ ++VEV +
Sbjct: 947 SIEIFTVETLDLGD-LWKVRLGHDNTGKAPGWFVDWVEVDA 986
Score = 35.8 bits (81), Expect = 0.097, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
Y + V TG +GT SKI + + A G K+ G + ++RG D+F
Sbjct: 20 YIVTVFTGDVRGAGTKSKIYLVMYGARGN-------KNSGKIFLEGGVFDRGRTDIFHIE 72
Query: 66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSR 119
+ SP+ ++V G+ W+CE V + P Q+ F WL +
Sbjct: 73 LAVLLSPLSRVSVGHGNVGVNRGWFCEKVVILC--PFTGIQQT-FPCSNWLDEK 123
Score = 35.8 bits (81), Expect = 0.098, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 2 DYCVYTLYVKTGSGIKSGTDSKISIA----LGDAVGRSVWVPDLKSWGLMGPHHDYYERG 57
D +Y++ + TG+ +GTD+K+ I LGD R + + ++ + +ERG
Sbjct: 1180 DIVLYSVQIFTGNIPGAGTDAKVYITIYGDLGDTGERYLGKSENRT--------NKFERG 1231
Query: 58 NVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
D F +G I + + D S WY E VE+ + D+ F +WLS
Sbjct: 1232 TADTFIIEAADLGV-IYKIKLRHDNSKWCADWYVEKVEIWNDTNE---DEFLFLCGRWLS 1287
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 53 YYERGNVDVFSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQS-AFY 111
++ER + F +G I + + + +GM P W+C +V++ P + ++ F
Sbjct: 1075 FFERKSASRFIVELEDVGEIIEKIRIGHNNTGMNPGWHCSHVDIRRLLPDKDGAETLTFP 1134
Query: 112 VDQWLSS 118
D+WL++
Sbjct: 1135 CDRWLAT 1141
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 5 VYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSG 64
+Y + V TG + GTDS I + L G + + + +ER D F
Sbjct: 1481 LYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEMQ-------LDKKKARFEREQNDTFIM 1533
Query: 65 RGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSR 119
I +P + + DG G P W+ E + + + + D + FY WLS R
Sbjct: 1534 EILDI-APFTKMRIRIDGLGSRPEWFLERILLKNMN---TGDLTMFYYGDWLSQR 1584
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 6 YTLYVKTGSGIKSGTDSKISIAL-GDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSG 64
Y + V TG+ K+GTD+ + + + G+ G + P KS + +E+G D F+
Sbjct: 746 YEVQVVTGNVPKAGTDANVYLTIYGEEYGDTGERPLKKS-----DKSNKFEQGQTDTFTI 800
Query: 65 RGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVT 97
+G+ + + + D +G W+ + +++T
Sbjct: 801 YAIDLGA-LTKIRIRHDNTGNRAGWFLDRIDIT 832
Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHH--DYYERGNVDVFS 63
Y + V TG +GTD+ + + L VG D L + D +E+GN D F+
Sbjct: 277 YHVTVCTGELEGAGTDANVYLCLFGDVG------DTGERLLYNCRNNTDLFEKGNADEFT 330
Query: 64 GRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWL 116
+ + + + + DG G WY + V V G S D F +WL
Sbjct: 331 IESVTMRN-VRRVRIRHDGKGSGSGWYLDRVLVREEGQPES-DNVEFPCLRWL 381
>sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla
PE=1 SV=1
Length = 1066
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 5 VYTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSG 64
+Y + V+TG +GTD+ I+I + A GR+ ++ L W H+ +E G+ + ++
Sbjct: 375 IYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDKW-----FHNDFEAGSKEQYTV 428
Query: 65 RGPCIGSPICNLNVSSDGSGMF---PSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMP 121
+G +G I + + SDG G + P W+ V + S+ R F +W+ M
Sbjct: 429 QGFDVGD-IQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCF---RWVIKDMV 484
Query: 122 PFESTAVI 129
F A +
Sbjct: 485 LFPGEATL 492
>sp|Q7Z443|PK1L3_HUMAN Polycystic kidney disease protein 1-like 3 OS=Homo sapiens
GN=PKD1L3 PE=2 SV=1
Length = 1732
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
Y + V TG + T +K+ I L + GRS + L P +ERG +DVF
Sbjct: 745 YLIQVYTGYRRSAATTAKVVITLYGSEGRS------EPHHLCDPQKTVFERGGLDVFLLT 798
Query: 66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
+ +L + D SG+ PSWY V V R + F + WL+
Sbjct: 799 TWTSLGNLHSLRLWHDNSGVSPSWYVSQVIVCDMAVKR---KWHFLCNCWLA 847
>sp|P98161|PKD1_HUMAN Polycystin-1 OS=Homo sapiens GN=PKD1 PE=1 SV=3
Length = 4303
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHH----DYYERGNVDV 61
Y + VKTG G SGT + + I L RS G H + R ++D+
Sbjct: 3120 YEILVKTGWGRGSGTTAHVGIMLYGVDSRS------------GHRHLDGDRAFHRNSLDI 3167
Query: 62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
F P + + V D G+ P+W+ ++V V RS + F V+ WLS
Sbjct: 3168 FRIATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQTARS---AFFLVNDWLS 3220
>sp|O08852|PKD1_MOUSE Polycystin-1 OS=Mus musculus GN=Pkd1 PE=1 SV=2
Length = 4293
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 19/116 (16%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHH----DYYERGNVDV 61
Y + VKTG SGT + + I L RS G H + R ++D+
Sbjct: 3112 YEILVKTGWSRGSGTTAHVGIMLYGEDNRS------------GHRHLDGDRAFHRNSLDI 3159
Query: 62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
F P + + V D G+ P+W+ +++ V RS + F V+ WLS
Sbjct: 3160 FQIATPHSLGSVWKIRVWHDNKGLSPAWFLQHIIVRDLQSARS---TFFLVNDWLS 3212
>sp|Q6ZNL0|YP009_HUMAN GPS, PLAT and transmembrane domain-containing protein FLJ00285
OS=Homo sapiens PE=2 SV=2
Length = 789
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHH----DYYERGNVDV 61
Y + VKTG G SGT + + I L RS G H + R ++D+
Sbjct: 267 YEILVKTGWGRGSGTTAHVGIMLYGVDSRS------------GHRHLDGDRAFHRNSLDI 314
Query: 62 FSGRGPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMP 121
F P + + V D G+ P+W+ ++V + ++ + F V+ WLS
Sbjct: 315 FRIATPHSLGSVWKIRVWHD-KGLSPAWFLQHVIIRDL---QTAHSTFFLVNDWLSVETE 370
Query: 122 PFESTAVIDGCGMSGGRAAREKIRGLL 148
+ +++ ++ AA + R LL
Sbjct: 371 A--NGGLVEKEVLAASHAALLRFRRLL 395
>sp|Q7TN88|PK1L2_MOUSE Polycystic kidney disease protein 1-like 2 OS=Mus musculus GN=Pkd1l2
PE=2 SV=1
Length = 2461
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVFSGR 65
Y + V TG + T SK+++ L + G S + L P +ERG VDVF
Sbjct: 1393 YLVTVYTGHRRGAATSSKVTLTLYGSDGES------EPHHLSDPDAAVFERGGVDVFLLS 1446
Query: 66 GPCIGSPICNLNVSSDGSGMFPSWYCEYVEVTSTGPHRSCDQSAFYVDQWLS 117
+ +L + D SG PSWY V V + R + F + WLS
Sbjct: 1447 TLFPLGELQSLRLWHDNSGDRPSWYVSRVLVYDSVVDR---KWYFLCNSWLS 1495
>sp|Q4WAU7|XYL2_ASPFU Probable D-xylulose reductase A OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xdhA
PE=3 SV=2
Length = 358
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 40 DLKSWGLMGPHHDYYERGNVDVFSGRGPC------------IGSPICNLNVSSDGSGMFP 87
++K G+ G Y+E G++ F +GP +GS + L V D M P
Sbjct: 40 NVKFTGICGSDVHYWEHGSIGQFVVKGPMVLGHESSGVISKVGSAVTGLKV-GDRVAMEP 98
Query: 88 SWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMPPFEST 126
C E G + C++ AF + PP++ T
Sbjct: 99 GIPCRRCEPCKAGKYNLCEKMAF-------AATPPYDGT 130
>sp|B0YC65|XYL2_ASPFC Probable D-xylulose reductase A OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=xdhA PE=3 SV=2
Length = 358
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 40 DLKSWGLMGPHHDYYERGNVDVFSGRGPC------------IGSPICNLNVSSDGSGMFP 87
++K G+ G Y+E G++ F +GP +GS + L V D M P
Sbjct: 40 NVKFTGICGSDVHYWEHGSIGQFVVKGPMVLGHESSGVISKVGSAVTGLKV-GDRVAMEP 98
Query: 88 SWYCEYVEVTSTGPHRSCDQSAFYVDQWLSSRMPPFEST 126
C E G + C++ AF + PP++ T
Sbjct: 99 GIPCRRCEPCKAGKYNLCEKMAF-------AATPPYDGT 130
>sp|Q6KID2|SYV_MYCMO Valine--tRNA ligase OS=Mycoplasma mobile (strain ATCC 43663 / 163K
/ NCTC 11711) GN=valS PE=3 SV=1
Length = 839
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 87 PSWYCEY--VEVTSTGPHRSCDQSAFYVDQWLSSRMPPF 123
P+WY E ++V +T P + Q +D W SS + PF
Sbjct: 415 PAWYDEKGNIKVQTTSPGSNWTQDQDVLDTWFSSGIAPF 453
>sp|A6Q3E8|PURL_NITSB Phosphoribosylformylglycinamidine synthase 2 OS=Nitratiruptor sp.
(strain SB155-2) GN=purL PE=3 SV=1
Length = 735
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 40 DLKSWGLMGPHHDYYERGNVDVFSGRGPCIGSPICNLNVSSD 81
D+K +G H Y RG V G G C+G P VS D
Sbjct: 131 DVKREDEVGAHQRYLVRGVVAGIGGYGNCVGVPTIGGEVSFD 172
>sp|P09917|LOX5_HUMAN Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2
Length = 674
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 6 YTLYVKTGSGIKSGTDSKISIALGDAVGRSVWVPDLKSWGLMGPHHDYYERGNVDVF 62
YT+ V TGS +GTD I ++L + G S + L P ++ +ERG VD +
Sbjct: 4 YTVTVATGSQWFAGTDDYIYLSLVGSAGCS------EKHLLDKPFYNDFERGAVDSY 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,642,199
Number of Sequences: 539616
Number of extensions: 2606942
Number of successful extensions: 4330
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4298
Number of HSP's gapped (non-prelim): 32
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)