BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042716
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129392|ref|XP_002320575.1| predicted protein [Populus trichocarpa]
gi|222861348|gb|EEE98890.1| predicted protein [Populus trichocarpa]
Length = 725
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 121/137 (88%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
IIL EAD LSTDALLY++W+LERYKG +K FFCC+DVS+LQPI+SLCTV+QLLPPSK+E+
Sbjct: 455 IILYEADMLSTDALLYIKWVLERYKGFSKFFFCCNDVSRLQPIRSLCTVVQLLPPSKREV 514
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
V+VLEFIAEQE I+LP+ LAEKIAD SKNNLRQAIRSFEAS +YPF E Q ILTGWED
Sbjct: 515 VQVLEFIAEQEAIELPYPLAEKIADKSKNNLRQAIRSFEASWHGSYPFTEDQEILTGWED 574
Query: 121 DITNIATKIIEEQSPKQ 137
DI NIA ++EEQSPKQ
Sbjct: 575 DIANIAKDMVEEQSPKQ 591
>gi|359489140|ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265748 [Vitis vinifera]
Length = 659
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 113/137 (82%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I+L EA+KLST+ALLY +WLL++Y+G N VFF CSD SKLQPIKSLCT++QLLPPS +EI
Sbjct: 425 IVLYEAEKLSTEALLYFKWLLDKYEGHNMVFFSCSDTSKLQPIKSLCTMVQLLPPSDEEI 484
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
VEVLE IA+QE I LP +LAEKI NSKNNLRQAIRSFEA+ + YPF E Q I TGWED
Sbjct: 485 VEVLELIAKQESINLPRELAEKIVGNSKNNLRQAIRSFEATWKFKYPFEEDQEIRTGWED 544
Query: 121 DITNIATKIIEEQSPKQ 137
DI IA IIEEQ+PKQ
Sbjct: 545 DIARIAKNIIEEQTPKQ 561
>gi|297744802|emb|CBI38070.3| unnamed protein product [Vitis vinifera]
Length = 530
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 113/137 (82%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I+L EA+KLST+ALLY +WLL++Y+G N VFF CSD SKLQPIKSLCT++QLLPPS +EI
Sbjct: 339 IVLYEAEKLSTEALLYFKWLLDKYEGHNMVFFSCSDTSKLQPIKSLCTMVQLLPPSDEEI 398
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
VEVLE IA+QE I LP +LAEKI NSKNNLRQAIRSFEA+ + YPF E Q I TGWED
Sbjct: 399 VEVLELIAKQESINLPRELAEKIVGNSKNNLRQAIRSFEATWKFKYPFEEDQEIRTGWED 458
Query: 121 DITNIATKIIEEQSPKQ 137
DI IA IIEEQ+PKQ
Sbjct: 459 DIARIAKNIIEEQTPKQ 475
>gi|255586016|ref|XP_002533677.1| Replication factor C subunit, putative [Ricinus communis]
gi|223526428|gb|EEF28707.1| Replication factor C subunit, putative [Ricinus communis]
Length = 661
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 112/137 (81%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
IIL AD+LS DA+LY++WLLERY+G +K FFCCSDVSKLQ IK LC ++QL PS EI
Sbjct: 429 IILYNADRLSADAVLYIKWLLERYQGSSKFFFCCSDVSKLQAIKELCNLVQLFMPSNDEI 488
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
V+VL+FIA+QEGI+LP Q AE+IA SKNNLRQAIRS EAS + +YPF E Q ILTGWED
Sbjct: 489 VKVLKFIAKQEGIELPFQFAERIALESKNNLRQAIRSLEASWRRSYPFAEDQEILTGWED 548
Query: 121 DITNIATKIIEEQSPKQ 137
DI NIA +I+EQSPKQ
Sbjct: 549 DIANIAKNMIQEQSPKQ 565
>gi|414867860|tpg|DAA46417.1| TPA: hypothetical protein ZEAMMB73_190155 [Zea mays]
Length = 638
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/137 (58%), Positives = 101/137 (73%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +ADKLS D Y+ W L RY G NK+ FCCSD S L+ IK LC V+ L PPS EI
Sbjct: 382 IVIHDADKLSFDLQHYIGWFLGRYAGCNKIIFCCSDASNLEAIKHLCKVVTLQPPSFDEI 441
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
+ VLE+IA QE I LP LA +I + NNLRQ IRSFEA+ + NYPF++GQVILTGWE+
Sbjct: 442 INVLEYIATQESIDLPRDLARRITVGANNNLRQTIRSFEATWKANYPFIDGQVILTGWEE 501
Query: 121 DITNIATKIIEEQSPKQ 137
+I+N+A+ I+EE SPKQ
Sbjct: 502 EISNVASNIMEEPSPKQ 518
>gi|357147528|ref|XP_003574379.1| PREDICTED: probable replication factor C subunit 3-like
[Brachypodium distachyon]
Length = 565
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 105/137 (76%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +AD++S+D Y+ W L RY G +K+ FCCS+ S L+ +K LC VI LLPPS EI
Sbjct: 313 IVVHDADRISSDLQHYIGWFLGRYVGCSKIIFCCSNSSNLEAVKHLCKVITLLPPSFDEI 372
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
++VLEFIA +EGI LP ++A +IA ++ NLRQAIRSFEA+ + NYPFVE Q ILTGWE+
Sbjct: 373 IKVLEFIATKEGIYLPREIASRIATSASTNLRQAIRSFEATWKANYPFVEDQPILTGWEE 432
Query: 121 DITNIATKIIEEQSPKQ 137
+I ++A KI+EE SPKQ
Sbjct: 433 EIFDVAKKIMEEPSPKQ 449
>gi|357467569|ref|XP_003604069.1| Replication factor C subunit [Medicago truncatula]
gi|355493117|gb|AES74320.1| Replication factor C subunit [Medicago truncatula]
Length = 800
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 106/137 (77%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
IIL EA+KLS +++LY++WL+E+YKG NK+FFCCSD S+LQPI+S CT ++L PS Q+I
Sbjct: 555 IILYEAEKLSLESVLYIKWLVEKYKGCNKLFFCCSDESRLQPIQSYCTTVRLSSPSTQQI 614
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
V++LE+I ++EGI+L H+ + I SKNNLRQAIRS EA+ + + ++LTGWED
Sbjct: 615 VKILEYIVQEEGIKLSHESIKSIVLRSKNNLRQAIRSLEATYRNKNALNDDDLVLTGWED 674
Query: 121 DITNIATKIIEEQSPKQ 137
DI NIA II EQSP+Q
Sbjct: 675 DILNIARNIITEQSPRQ 691
>gi|326491965|dbj|BAJ98207.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 591
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 103/137 (75%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +AD+LS+D Y+ W L RY G NK+ F CS S L+ ++ LC V++L PPS EI
Sbjct: 339 IVVHDADRLSSDLQHYIGWFLGRYAGCNKIIFSCSSSSNLESVEHLCKVVRLKPPSFDEI 398
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
++VLEFIA QEGI LPH LA +IA ++ NNLRQAIRSFEA+ + +YPF + Q ILTGWE+
Sbjct: 399 IKVLEFIATQEGIDLPHGLASRIAASASNNLRQAIRSFEATWKASYPFTKDQPILTGWEE 458
Query: 121 DITNIATKIIEEQSPKQ 137
+I ++A KI+EE SPKQ
Sbjct: 459 EIYDVAKKIMEEPSPKQ 475
>gi|224071367|ref|XP_002303425.1| predicted protein [Populus trichocarpa]
gi|222840857|gb|EEE78404.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 102/137 (74%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
II+ EA++LS DA L ++ L+ Y+G KV FCC D+S+L + LC VI LLPPS ++I
Sbjct: 194 IIVNEAERLSKDAQLRIKSFLQTYRGHCKVIFCCYDISRLHDLSPLCMVIPLLPPSDEQI 253
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
VEVL FIA+++ I+LP QLA IA+ SK L+QAIRSFEA+ NYPF E Q++LTGWE
Sbjct: 254 VEVLHFIAKKQDIELPDQLANNIAEKSKRCLQQAIRSFEATWHSNYPFKEEQLVLTGWEK 313
Query: 121 DITNIATKIIEEQSPKQ 137
+I +IAT IIEEQS K+
Sbjct: 314 EIADIATSIIEEQSSKR 330
>gi|147811404|emb|CAN63339.1| hypothetical protein VITISV_006668 [Vitis vinifera]
Length = 494
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 103/137 (75%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
IILC A+KLS L +R L+ Y+G KV+FC S S LQ +KSLCTVIQ+ PSK+EI
Sbjct: 254 IILCGAEKLSEGDQLLIRDHLQTYRGHFKVYFCYSGTSMLQHLKSLCTVIQIPTPSKEEI 313
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
VEVLEFIA+ E I+LP +LAE +A+ +K+++RQAIRSFEA+ ++NYPF E Q +TGWE+
Sbjct: 314 VEVLEFIAKHEAIELPPRLAENMAEKAKHSVRQAIRSFEATWKLNYPFKEDQEPITGWEE 373
Query: 121 DITNIATKIIEEQSPKQ 137
+ IA K+I EQS KQ
Sbjct: 374 EFAEIAKKVIAEQSAKQ 390
>gi|222613321|gb|EEE51453.1| hypothetical protein OsJ_32563 [Oryza sativa Japonica Group]
Length = 648
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +ADKLS+D Y+ W L RY G NK+ FCCSD S L+ ++ LC V+ L PPS EI
Sbjct: 424 IVVHDADKLSSDLQHYIGWFLGRYVGCNKIMFCCSDASNLEAVRHLCKVVTLKPPSSDEI 483
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
++VLE+IA QE I LP +A +I +S NNLRQAIRSFEA+ + + G++
Sbjct: 484 IKVLEYIAVQESIDLPRDIARRITMSSGNNLRQAIRSFEATWKAKLYVIRGKI 536
>gi|218185065|gb|EEC67492.1| hypothetical protein OsI_34758 [Oryza sativa Indica Group]
Length = 648
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +ADKLS+D Y+ W L RY G NK+ FCCSD S L+ ++ LC V+ L PPS EI
Sbjct: 424 IVVHDADKLSSDLQHYIGWFLGRYVGCNKIMFCCSDASNLEAVRHLCKVVTLKPPSSDEI 483
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
++VLE+IA QE I LP +A +I +S NNLRQAIRSFEA+ + + G++
Sbjct: 484 IKVLEYIAVQESIDLPRDIARRITMSSGNNLRQAIRSFEATWKAKLYVIRGKI 536
>gi|297610986|ref|NP_001065475.2| Os10g0574500 [Oryza sativa Japonica Group]
gi|255679664|dbj|BAF27312.2| Os10g0574500 [Oryza sativa Japonica Group]
Length = 516
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I++ +ADKLS+D Y+ W L RY G NK+ FCCSD S L+ ++ LC V+ L PPS EI
Sbjct: 308 IVVHDADKLSSDLQHYIGWFLGRYVGCNKIMFCCSDASNLEAVRHLCKVVTLKPPSSDEI 367
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
++VLE+IA QE I LP +A +I +S NNLRQAIRSFEA+ + + G++
Sbjct: 368 IKVLEYIAVQESIDLPRDIARRITMSSGNNLRQAIRSFEATWKAKLYVIRGKI 420
>gi|388511555|gb|AFK43839.1| unknown [Medicago truncatula]
Length = 354
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C +++ PS+++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSAYCRLVLCCNSSSRVTEAIRSRCLNVRINAPSEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVEVL+FI ++EG+QLP LA +IA+ S NLR+AI SFE R YPF + Q I W
Sbjct: 194 IVEVLQFIGKKEGLQLPSSLAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ I+ IA+ I++EQSPK+
Sbjct: 254 EEYISEIASDIMKEQSPKR 272
>gi|294464282|gb|ADE77654.1| unknown [Picea sitchensis]
Length = 354
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E Y G ++ CC VSK L+ ++S C I++ PSK++
Sbjct: 134 LVLNEVDKLSKEAQHSLRRTMEIYSGACRIILCCDSVSKVLEAVRSRCLNIRINSPSKEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLE+IA++EG+QLP +IA S NLR+AI FEA + YPF + Q T W
Sbjct: 194 IVDVLEYIAKKEGLQLPMGFTGRIAQQSNRNLRRAILCFEACKVQQYPFTDNQPAQTLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA+ I+ EQSPK+
Sbjct: 254 EQYISEIASDIVNEQSPKR 272
>gi|255569436|ref|XP_002525685.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
gi|223534985|gb|EEF36668.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 342
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + I+S C +++ PS+++
Sbjct: 135 LVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSRCLNVRISAPSEEQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV+VLEFI ++EG+QLPH A ++A+ S +LR+A+ SFE R YPF Q I W
Sbjct: 195 IVKVLEFIGKKEGLQLPHGFAARVAEKSNRSLRRAVLSFETCRVQQYPFTSNQPIPPMDW 254
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ ++ IA+ I+ EQSPK+
Sbjct: 255 EEYVSEIASDIMREQSPKK 273
>gi|297742084|emb|CBI33871.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 80/104 (76%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
IIL A LS + L ++ LE YKG KV+FC S SKLQ I+SLCTVIQ+L PSK +I
Sbjct: 221 IILYGAGMLSMNDQLQIQSCLETYKGHYKVYFCSSGASKLQHIESLCTVIQILSPSKVQI 280
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+EVLEFIA+ EGI+LP +LAE IA+ SK++++QAIRSFEA+ Q+
Sbjct: 281 IEVLEFIAKCEGIELPPRLAENIAEKSKHSIQQAIRSFEATWQL 324
>gi|15241031|ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis thaliana]
gi|18389268|gb|AAL67077.1| putative replication factor C [Arabidopsis thaliana]
gi|20259637|gb|AAM14175.1| putative replication factor C [Arabidopsis thaliana]
gi|332006337|gb|AED93720.1| replication factor C subunit 3/5 [Arabidopsis thaliana]
Length = 354
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + IKS C +++ PS++E
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
IV+VLEF+A++E +QLP A +IA+ S +LR+AI S E R NYPF QVI W
Sbjct: 194 IVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ + IAT +++EQSPK+
Sbjct: 254 EEYVAEIATDMMKEQSPKK 272
>gi|297812933|ref|XP_002874350.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320187|gb|EFH50609.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 359
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + IKS C +++ PS++E
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
IV+VLEF+A++E +QLP A +IA+ S +LR+AI S E R NYPF QVI W
Sbjct: 194 IVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ + IAT +++EQSPK+
Sbjct: 254 EEYVAEIATDMMKEQSPKK 272
>gi|356511754|ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 354
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C +++ PS+++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV+VLEFI ++EG+QLP A +IA+ S NLR+AI SFE R + YPF Q I W
Sbjct: 194 IVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQYPFTNKQAIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ I+ IA+ I++EQSPK+
Sbjct: 254 EEYISEIASDIMKEQSPKR 272
>gi|359806894|ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
gi|255645652|gb|ACU23320.1| unknown [Glycine max]
Length = 354
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C +++ PS+++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVEVLEFI ++EG+QLP A +I + S NLR+AI SFE R YPF Q I W
Sbjct: 194 IVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQYPFTNKQTIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ I+ IA+ I++EQSPK+
Sbjct: 254 EEYISEIASDIMKEQSPKR 272
>gi|388499612|gb|AFK37872.1| unknown [Lotus japonicus]
Length = 354
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C I++ PS+++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNIRINAPSEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVEV+EFI ++EG+Q+P A +IA+ S NLR+AI SFE R YPF Q I W
Sbjct: 194 IVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQYPFTNRQTIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ I+ IA+ I++EQ+PK+
Sbjct: 254 EEYISEIASDIMKEQNPKR 272
>gi|449528029|ref|XP_004171009.1| PREDICTED: uncharacterized LOC101218071 [Cucumis sativus]
Length = 723
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L + DK + D +RW+++ YK KV CC D S L+ + S C VI++ PP E
Sbjct: 501 VVLLDVDKATEDIQHLLRWIMDGYKDACKVVLCCEDDSGILESVISRCKVIKINPPVTHE 560
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I++VL IAE+E LP A KIA +K NLR+AI + EA + NYPF + Q I GWE
Sbjct: 561 IMDVLIKIAEKEEFDLPMNFASKIATKAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWE 620
Query: 120 DDITNIATKIIEEQS 134
D + +A+ I+E+ S
Sbjct: 621 DALVELASHILEDPS 635
>gi|449451671|ref|XP_004143585.1| PREDICTED: uncharacterized protein LOC101218071 [Cucumis sativus]
Length = 713
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L + DK + D +RW+++ YK KV CC D S L+ + S C VI++ PP E
Sbjct: 501 VVLLDVDKATEDIQHLLRWIMDGYKDACKVVLCCEDDSGILESVISRCKVIKINPPVTHE 560
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I++VL IAE+E LP A KIA +K NLR+AI + EA + NYPF + Q I GWE
Sbjct: 561 IMDVLIKIAEKEEFDLPMNFASKIATKAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWE 620
Query: 120 DDITNIATKIIEEQS 134
D + +A+ I+E+ S
Sbjct: 621 DALVELASHILEDPS 635
>gi|449453820|ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-like [Cucumis sativus]
gi|449521275|ref|XP_004167655.1| PREDICTED: replication factor C subunit 3-like [Cucumis sativus]
Length = 354
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C +++ P++++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VLE+I ++EG+QLP A +IA+ S +LR+AI SFE R YPFV Q I W
Sbjct: 194 IFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ IT IA++I++EQSPK+
Sbjct: 254 EEYITEIASEIMKEQSPKR 272
>gi|302804015|ref|XP_002983760.1| hypothetical protein SELMODRAFT_119010 [Selaginella moellendorffii]
gi|300148597|gb|EFJ15256.1| hypothetical protein SELMODRAFT_119010 [Selaginella moellendorffii]
Length = 260
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNK-VFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQ 58
++L +ADK+S +A ++RWL++RY K + CCS SKL ++ C V+ + P+
Sbjct: 120 LVLHDADKVSAEAQQHIRWLMDRYSDYCKFMLLCCSQPSKLSDSVRLRCIVVDVHNPTVD 179
Query: 59 EIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGW 118
++V+VL F+A++E + L A +IA SKN RQA+ S EA + YPF E QVI W
Sbjct: 180 DVVQVLYFVAKRENLDLQEHFALRIAKASKN-FRQAVLSLEACKLKQYPFDENQVIAIEW 238
Query: 119 EDDITNIATKIIEEQSPKQ 137
EDDI ++A II+EQ+P++
Sbjct: 239 EDDIVSMARDIIDEQNPRR 257
>gi|224146053|ref|XP_002325862.1| predicted protein [Populus trichocarpa]
gi|222862737|gb|EEF00244.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + I+S C +++ P +++
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSRCLNVRINAPKEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV+VLEFI ++EG+QLP A +IAD S +LR+AI SFE R YPF Q I W
Sbjct: 194 IVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQYPFSSNQAIPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ ++ I + I+ EQSPK+
Sbjct: 254 EEYVSEICSDIMREQSPKR 272
>gi|225439256|ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
gi|296089274|emb|CBI39046.3| unnamed protein product [Vitis vinifera]
Length = 354
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ CC+ SK+ + ++S C I++ P++++
Sbjct: 134 LVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNIRINAPTEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VLEFIA++EG+QLP A +IA+ S +LR+AI SFE R YPF Q + W
Sbjct: 194 ITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQYPFTNNQAMPPMDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ ++ IA+ I++EQSPK+
Sbjct: 254 EEYVSEIASDIMKEQSPKR 272
>gi|302806064|ref|XP_002984782.1| hypothetical protein SELMODRAFT_121188 [Selaginella moellendorffii]
gi|302808301|ref|XP_002985845.1| hypothetical protein SELMODRAFT_234901 [Selaginella moellendorffii]
gi|300146352|gb|EFJ13022.1| hypothetical protein SELMODRAFT_234901 [Selaginella moellendorffii]
gi|300147368|gb|EFJ14032.1| hypothetical protein SELMODRAFT_121188 [Selaginella moellendorffii]
Length = 354
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ CC+ SK ++ ++S C +++ PS+ E
Sbjct: 134 LVLNEVDRLSKEAQHSLRRTMEKYSAACRLILCCTSASKVIEAVRSRCLNVRINAPSEDE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I +VL+F+A++E I+LP A +IA +S NLR+AI S EA + YPF E Q V T W
Sbjct: 194 ITKVLQFVAKKEEIRLPPAFAGRIALHSNRNLRRAILSLEACKVQQYPFTENQPVQTTDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA+ I+ EQSPK+
Sbjct: 254 EQYIVEIASDIVNEQSPKR 272
>gi|302817642|ref|XP_002990496.1| hypothetical protein SELMODRAFT_131813 [Selaginella moellendorffii]
gi|300141664|gb|EFJ08373.1| hypothetical protein SELMODRAFT_131813 [Selaginella moellendorffii]
Length = 260
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNK-VFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQ 58
++L +AD++S +A ++RWL++RY K + CCS SKL ++ C V+ + P+
Sbjct: 120 LVLHDADEVSAEAQQHIRWLMDRYSDYCKFMLLCCSQPSKLSDSVRLRCIVVDVHNPTVD 179
Query: 59 EIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGW 118
++V+VL F+A++E + L A +IA SKN RQA+ S EA + YPF E QVI W
Sbjct: 180 DVVQVLYFVAKRENLDLQEHFAWRIAKASKN-FRQAVLSLEACKLKQYPFDENQVIAIEW 238
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+DI ++A II+EQ+P++
Sbjct: 239 ENDIVSMARDIIDEQNPRR 257
>gi|440803530|gb|ELR24424.1| replication factor C (activator 1) 3, putative [Acanthamoeba
castellanii str. Neff]
Length = 303
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E ++LS +A +R +E+Y + ++ CC+ SK + P++S C +I++ PS E
Sbjct: 80 VVLNEVERLSKEAQHALRRTMEKYMSVCRLILCCNSTSKVIDPVRSRCLMIRVAAPSLDE 139
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
+ + L+ I+++EGI LP +LA IA S NLR+AI +A+ YPF +GQ + +T W
Sbjct: 140 VTKSLQAISKKEGITLPPELARSIAVQSDRNLRKAILMLQATHTAKYPFEKGQRVEMTDW 199
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ I +A II+EQSPK+
Sbjct: 200 EEFIVRLAQFIIDEQSPKR 218
>gi|391337617|ref|XP_003743163.1| PREDICTED: replication factor C subunit 3-like [Metaseiulus
occidentalis]
Length = 362
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL E D+LS DA +R +E+Y ++ C+ +K+ P I+S C I++ PS E
Sbjct: 139 VILTEVDRLSRDAQHALRRTMEKYMQSCRLILVCNSTTKVIPAIRSRCLGIRVPAPSSSE 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
IV +L +IA++E + LP +LA+KIA +S NLR+AI EA R YPF Q VIL W
Sbjct: 199 IVGILNYIAKKESLNLPQELAQKIAQSSTGNLRKAILMLEACRVKQYPFSADQDVILPDW 258
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I + A +II+EQ+P++
Sbjct: 259 EIYIRDTANEIIKEQTPQK 277
>gi|218191427|gb|EEC73854.1| hypothetical protein OsI_08618 [Oryza sativa Indica Group]
Length = 729
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L + DK+S ++W+++ +K+ C D S L +KS C +I + P+ +E
Sbjct: 507 IVLYDVDKVSESNQRLIKWMIDSSSDTHKILMTCQDESHILDSMKSRCKLICIGVPNTRE 566
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
IV++L +I+++E LP A IA S+ N+R+AI + EA + NYPF++GQ I GWE
Sbjct: 567 IVDILTYISKKESFDLPSSFAATIASQSRQNMREAILALEACKANNYPFIDGQAIPLGWE 626
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + IA +I+++ SPK+
Sbjct: 627 NVLQEIAAEILDDPSPKR 644
>gi|222623516|gb|EEE57648.1| hypothetical protein OsJ_08080 [Oryza sativa Japonica Group]
Length = 691
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L + DK+S ++W+++ +K+ C D S L +KS C +I + P+ +E
Sbjct: 469 IVLYDVDKVSESNQRLIKWMIDSSSDTHKILMTCQDESHILDSMKSRCKLICIGVPNTRE 528
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
IV++L +I+++E LP A IA S+ N+R+AI + EA + NYPF++GQ I GWE
Sbjct: 529 IVDILTYISKKESFDLPSSFAATIASQSRQNMREAILALEACKANNYPFIDGQAIPLGWE 588
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + IA +I+++ SPK+
Sbjct: 589 NVLQEIAAEILDDPSPKR 606
>gi|168028662|ref|XP_001766846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681825|gb|EDQ68248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 354
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK ++ ++S C I++ PS+ +
Sbjct: 134 LVLNEVDKLSKEAQHSLRRTMEKYSAACRLLLCCNSASKVIEAVRSRCVNIRINSPSRDD 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
IV+VL F+A++E + LP +LA +IA +S NLR++I EA + YPF Q V T W
Sbjct: 194 IVDVLMFVAKKENLILPPELAGRIAHHSNRNLRRSILCLEACKAKQYPFTADQEVQTTDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I +A I+ EQSPK+
Sbjct: 254 EQFIVGLANDIVTEQSPKK 272
>gi|357112071|ref|XP_003557833.1| PREDICTED: replication factor C subunit 3-like [Brachypodium
distachyon]
Length = 354
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ P++ +
Sbjct: 134 LILNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPTEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E +QLP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVPPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IAT I+ EQSPK+
Sbjct: 254 EKYVSEIATDILSEQSPKR 272
>gi|30314657|dbj|BAC76086.1| replication factor C 38 kDa subunit [Oryza sativa Japonica Group]
Length = 354
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E +QLP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IA I++EQSPK+
Sbjct: 254 EQYVSEIAADIMKEQSPKR 272
>gi|115455849|ref|NP_001051525.1| Os03g0792600 [Oryza sativa Japonica Group]
gi|28269436|gb|AAO37979.1| putative replication factor [Oryza sativa Japonica Group]
gi|108711507|gb|ABF99302.1| Activator 1 38 kDa subunit, putative, expressed [Oryza sativa
Japonica Group]
gi|113549996|dbj|BAF13439.1| Os03g0792600 [Oryza sativa Japonica Group]
gi|125546006|gb|EAY92145.1| hypothetical protein OsI_13856 [Oryza sativa Indica Group]
gi|215737314|dbj|BAG96243.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765336|dbj|BAG87033.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625948|gb|EEE60080.1| hypothetical protein OsJ_12910 [Oryza sativa Japonica Group]
Length = 354
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E +QLP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IA I++EQSPK+
Sbjct: 254 EQYVSEIAADIMKEQSPKR 272
>gi|326488121|dbj|BAJ89899.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ P++ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPTEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E +QLP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFSANQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IAT+I+ EQSPK+
Sbjct: 254 EQYVSEIATEILSEQSPKR 272
>gi|443704239|gb|ELU01384.1| hypothetical protein CAPTEDRAFT_181059 [Capitella teleta]
Length = 358
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK+ P I+S C +++ PS+ +
Sbjct: 132 LVLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIPAIRSRCFAVRVPAPSEDQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I +VL+ + ++EG+ LP LA+KIA S NLR+AI EA R YPF Q V L W
Sbjct: 192 ICQVLQLVCKKEGLNLPSDLAKKIATQSNRNLRRAILMCEACRVQQYPFSSNQDVTLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A II++QSPK+
Sbjct: 252 ELYLRETANMIIQQQSPKR 270
>gi|195621066|gb|ACG32363.1| replication factor C subunit 5 [Zea mays]
Length = 354
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E + LP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IAT I+ EQSPK+
Sbjct: 254 EQYVSEIATDILTEQSPKR 272
>gi|212721694|ref|NP_001131961.1| uncharacterized protein LOC100193357 [Zea mays]
gi|194693044|gb|ACF80606.1| unknown [Zea mays]
gi|414873276|tpg|DAA51833.1| TPA: replication factor C subunit 5 [Zea mays]
Length = 354
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E + LP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IAT I+ EQSPK+
Sbjct: 254 EQYVSEIATDILTEQSPKR 272
>gi|384253748|gb|EIE27222.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 354
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ F CS+VSK + P++S C +++ P+ E
Sbjct: 134 LLLNEVDRLSREAQHSLRRTMEKYSATCRLIFSCSNVSKVIDPLRSRCLCVRVPGPTGSE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ +A++E +QLP L ++I S NLR+A+ + E R YPF E Q + L W
Sbjct: 194 IQHVLQHVAQKENVQLPDALCQRIVQMSDRNLRRALLTLETCRVTQYPFTEAQSVQLPDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA I++EQSPK+
Sbjct: 254 EMYIQEIAAFILQEQSPKR 272
>gi|72016481|ref|XP_779912.1| PREDICTED: replication factor C subunit 3 isoform 1
[Strongylocentrotus purpuratus]
Length = 356
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK+ P I+S C +++ PS E
Sbjct: 132 VVLTEVDRLTKDAQHALRRTMEKYTATCRLILCCNSTSKVIPAIRSRCLGVRVAAPSIAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I ++L+ + ++EG+ LP +LA++IA+ S+ NLR+AI S EA + YPF Q I W
Sbjct: 192 ITQILQNVCKKEGLNLPSELAKRIAEKSERNLRKAILSCEACKVQQYPFSADQDIPEADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + + A II++QSP+Q
Sbjct: 252 EVFLRDTANHIIQQQSPRQ 270
>gi|388517395|gb|AFK46759.1| unknown [Lotus japonicus]
Length = 201
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 21 LERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQL 79
+E+Y ++ CC+ S++ + I+S C I++ PS+++IVEV+EFI ++EG+Q P
Sbjct: 1 MEKYSAYCRLILCCNSSSRVTEAIRSRCLNIRINAPSEEQIVEVIEFIGKKEGLQFPSGF 60
Query: 80 AEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGWEDDITNIATKIIEEQSPKQ 137
A +IA+ S NLR+AI SFE R YPF Q I WE+ I+ IA+ I++EQSPK+
Sbjct: 61 AARIAEKSNRNLRRAILSFETCRVQQYPFTNRQTIPPMDWEEYISEIASDIMKEQSPKR 119
>gi|417399569|gb|JAA46780.1| Putative replication factor c subunit rfc3 [Desmodus rotundus]
Length = 356
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS DA +R +E+Y ++ CCS SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEVDRLSKDAQHALRRTMEKYMATCRLILCCSSTSKVIPPIRSRCLAVRVPAPSIEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I +VL + ++EG+ LP QLA ++A+ S NLR+A+ + EA R YPF Q V T W
Sbjct: 192 ICDVLSAVCKKEGLSLPPQLARRLAEQSCRNLRKALLACEACRVQQYPFTADQDVPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|427795473|gb|JAA63188.1| Putative replication factor c subunit rfc3, partial [Rhipicephalus
pulchellus]
Length = 357
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL E DKL+ DA +R +E+Y ++ CC+ SK+ P I+S C I++ PS E
Sbjct: 134 VILTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSCSKVIPAIRSRCLAIRVAAPSVDE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
++ VL +A +EGI LP LA+ IA S NLR+A+ EA R YPF + Q + W
Sbjct: 194 VITVLNLVARKEGITLPDTLAQAIAAQSHRNLRRAVLMLEACRAQQYPFSDNQKVRQPDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I++EQS K+
Sbjct: 254 ELYLEETAKMIVQEQSVKR 272
>gi|413932847|gb|AFW67398.1| hypothetical protein ZEAMMB73_776055 [Zea mays]
Length = 354
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 134 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV+VLEFI ++E + LP A +IA S NLR+AI FE + YPF QV W
Sbjct: 194 IVQVLEFIGKKENLILPAGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IAT I+ EQSPK+
Sbjct: 254 EQYVSEIATDILTEQSPKR 272
>gi|291408671|ref|XP_002720641.1| PREDICTED: replication factor C 3 [Oryctolagus cuniculus]
Length = 356
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S+ NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLTTVCKKEGLNLPSQLAHRLAEKSRRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|427795367|gb|JAA63135.1| Putative replication factor c subunit rfc3, partial [Rhipicephalus
pulchellus]
Length = 382
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL E DKL+ DA +R +E+Y ++ CC+ SK+ P I+S C I++ PS E
Sbjct: 159 VILTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSCSKVIPAIRSRCLAIRVAAPSVDE 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
++ VL +A +EGI LP LA+ IA S NLR+A+ EA R YPF + Q + W
Sbjct: 219 VITVLNLVARKEGITLPDTLAQAIAAQSHRNLRRAVLMLEACRAQQYPFSDNQKVRQPDW 278
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I++EQS K+
Sbjct: 279 ELYLEETAKMIVQEQSVKR 297
>gi|281204078|gb|EFA78274.1| replication factor C subunit [Polysphondylium pallidum PN500]
Length = 346
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E DKLS DA +R +E+Y ++ CC SK + PI+S C I++ P+K+E
Sbjct: 128 VILNEVDKLSKDAQHALRRTMEKYANFCRLILCCDSTSKVIDPIRSRCMGIRVPAPTKEE 187
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
IV+VL+ +A++E L ++A A+ S NLR A+ E+ + YPF ++ L WE
Sbjct: 188 IVKVLQNVAKKERFDLSAEVAGHFAERSNGNLRYALLLLESKKTKEYPFQTNELPLLDWE 247
Query: 120 DDITNIATKIIEEQSPKQ 137
I N+A +I EQSP +
Sbjct: 248 SAIFNVANDMITEQSPAR 265
>gi|255561098|ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
gi|223539239|gb|EEF40832.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 779
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L + DK + D ++W+++ Y K+ CC D + L+P+ + C VI++ P E
Sbjct: 556 LVLYQVDKAAEDIQHLIKWIMDCYTDACKLILCCEDDADILEPVTNRCRVIKVDSPVTHE 615
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA +E +LP A +IA SK +LR+AI + EA ++ NYPF + Q I + WE
Sbjct: 616 IMEVLIQIARKEEFELPMNFAARIAAKSKQHLRKAIMTLEACKEHNYPFADDQPIPSSWE 675
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + +A +I+ + SPK+
Sbjct: 676 EVLIELAAEILSDPSPKR 693
>gi|114649328|ref|XP_509625.2| PREDICTED: replication factor C subunit 3 isoform 4 [Pan
troglodytes]
gi|397513233|ref|XP_003826924.1| PREDICTED: replication factor C subunit 3-like [Pan paniscus]
gi|410218892|gb|JAA06665.1| replication factor C (activator 1) 3, 38kDa [Pan troglodytes]
gi|410266462|gb|JAA21197.1| replication factor C (activator 1) 3, 38kDa [Pan troglodytes]
gi|410287194|gb|JAA22197.1| replication factor C (activator 1) 3, 38kDa [Pan troglodytes]
gi|410331917|gb|JAA34905.1| replication factor C (activator 1) 3, 38kDa [Pan troglodytes]
Length = 356
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA +IA+ S+ NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRIAEKSRRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|359476885|ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
Length = 766
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSD-VSKLQPIKSLCTVIQLLPPSKQE 59
++L E DK + + ++W+++ Y ++ CC D V L+ +K+ C VI+L P E
Sbjct: 546 LVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVIKLEAPVTHE 605
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA +E LP A KIA SK +LR+AI + EA + NYPF++ Q I GWE
Sbjct: 606 IMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLDDQPIPLGWE 665
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + +A +++ + SP +
Sbjct: 666 EVLVELAAEVLVDPSPNR 683
>gi|297735132|emb|CBI17494.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSD-VSKLQPIKSLCTVIQLLPPSKQE 59
++L E DK + + ++W+++ Y ++ CC D V L+ +K+ C VI+L P E
Sbjct: 488 LVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVIKLEAPVTHE 547
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA +E LP A KIA SK +LR+AI + EA + NYPF++ Q I GWE
Sbjct: 548 IMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLDDQPIPLGWE 607
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + +A +++ + SP +
Sbjct: 608 EVLVELAAEVLVDPSPNR 625
>gi|432094499|gb|ELK26061.1| Replication factor C subunit 3 [Myotis davidii]
Length = 425
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C I++ PS ++
Sbjct: 201 VLLTEVDKLTRDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAIRVPAPSIED 260
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 261 ICHVLSTVCKKEGLNLPSQLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 320
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 321 EVYLRETANAIVSQQTPQR 339
>gi|217071788|gb|ACJ84254.1| unknown [Medicago truncatula]
Length = 262
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKLS +A +R +E+Y ++ CC+ S++ + I+S C +++ PS+++
Sbjct: 134 LVLNDVDKLSREAQHSLRRTMEKYSAYCRLVLCCNSSSRVTEAIRSRCLNVRINAPSEEQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVEVL+FI ++EG+QLP LA +IA+ S NLR+AI SFE R YPF + Q I W
Sbjct: 194 IVEVLQFIGKKEGLQLPSSLAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTIPPMDW 253
Query: 119 EDDIT 123
E+ I+
Sbjct: 254 EEYIS 258
>gi|328866732|gb|EGG15115.1| replication factor C subunit [Dictyostelium fasciculatum]
Length = 352
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E DKLS DA +R +E+Y ++ CC S+ + PI+S C I++ PS +
Sbjct: 132 VILNEVDKLSKDAQHALRRTMEKYAASCRLILCCDSTSRVIDPIRSRCLGIRVPAPSIAD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ VL +A +E +LP +++E+IA +K NLR A+ EA + YPFVEG V L WE
Sbjct: 192 VQNVLNIVATKEKFELPKKISEEIAVKAKGNLRYALLMLEAKKAKQYPFVEG-VPLLDWE 250
Query: 120 DDITNIATKIIEEQSPKQ 137
+ I IA II EQ+P +
Sbjct: 251 NYIQVIARDIIMEQTPAK 268
>gi|308321967|gb|ADO28121.1| replication factor c subunit 3 [Ictalurus furcatus]
Length = 356
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L EAD+L+ DA +R +E+Y G ++ CC+ SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEADRLTKDAQHALRRTMEKYMGTCRLILCCNSTSKVISPIRSRCLAVRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
+ VL + ++EG+ LP +LA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 VCSVLMSVCKKEGLILPTELAKRIAEKSGRNLRKALLMCEACRVQQYPFSADQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANVIVNQQSPQR 270
>gi|328772230|gb|EGF82269.1| hypothetical protein BATDEDRAFT_16167 [Batrachochytrium
dendrobatidis JAM81]
Length = 353
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD LS DA +R +E+Y G ++ CC+ SK+ PI+S C +I++ PS E
Sbjct: 132 VVLNEADSLSRDAQAGLRRTMEKYMGNMRMILCCNVTSKIISPIRSRCLLIRVAAPSFTE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ +A++E +L + A++IA S+ NLR+A+ EA++ YPF QV+ T W
Sbjct: 192 IQTVLQNVAKEENFKLSSEFAQRIATESEGNLRKALLVLEAAKAQQYPFTNNQVLPKTDW 251
Query: 119 EDDITNIATKIIEEQSPK 136
E I IA I+ +Q+ K
Sbjct: 252 EQHIHQIAHLILNQQNSK 269
>gi|351703595|gb|EHB06514.1| Replication factor C subunit 3 [Heterocephalus glaber]
Length = 356
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAQRIAEKSCRNLRKALLMSEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|345790237|ref|XP_534500.3| PREDICTED: replication factor C subunit 3 [Canis lupus familiaris]
Length = 356
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ EQ+P++
Sbjct: 252 EVYLRETANAIVSEQTPQR 270
>gi|426375155|ref|XP_004054411.1| PREDICTED: replication factor C subunit 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 315
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|403286412|ref|XP_003934486.1| PREDICTED: replication factor C subunit 3-like [Saimiri boliviensis
boliviensis]
Length = 356
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ EQ+P++
Sbjct: 252 EVYLRETANAIVSEQTPQR 270
>gi|330801755|ref|XP_003288889.1| replication factor C subunit [Dictyostelium purpureum]
gi|325081034|gb|EGC34565.1| replication factor C subunit [Dictyostelium purpureum]
Length = 349
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E DKLS DA +R +E+Y ++ CC +K + PIKS C I++ P+ +E
Sbjct: 132 VILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCLGIRIPAPTNEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I +VL +A+ E +LP +L++ IA+ NLR A+ E+ + YPF ++ L WE
Sbjct: 192 IEKVLSKVAQSEKFELPSKLSQNIANQCNGNLRYALLLLESQKAKQYPFQSSEIPLLDWE 251
Query: 120 DDITNIATKIIEEQSP 135
+ I+ I I +EQSP
Sbjct: 252 NYISQIVNDIFQEQSP 267
>gi|108773789|ref|NP_853536.2| replication factor C subunit 3 isoform 2 [Homo sapiens]
Length = 305
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|298104116|ref|NP_001177121.1| replication factor C subunit 3 [Sus scrofa]
Length = 356
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I VL + ++EG+ LP QLA K+A+ S NLR+A+ EA R YPF V+ ++ T W
Sbjct: 192 ICHVLSTVCKKEGLSLPSQLARKLAEKSCRNLRKALLMCEACRVQQYPFTVDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|57526873|ref|NP_001009629.1| replication factor C subunit 3 [Rattus norvegicus]
gi|56789712|gb|AAH88281.1| Replication factor C (activator 1) 3 [Rattus norvegicus]
gi|149015521|gb|EDL74921.1| replication factor C (activator 1) 3 [Rattus norvegicus]
Length = 356
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C I++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAIRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 192 ICSVLSTVCKKEGLALPSKLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|194383204|dbj|BAG59158.1| unnamed protein product [Homo sapiens]
Length = 305
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|301765690|ref|XP_002918266.1| PREDICTED: replication factor C subunit 3-like [Ailuropoda
melanoleuca]
gi|281349170|gb|EFB24754.1| hypothetical protein PANDA_006686 [Ailuropoda melanoleuca]
Length = 356
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA+++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAQRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|54696202|gb|AAV38473.1| replication factor C (activator 1) 3, 38kDa [synthetic construct]
gi|60824442|gb|AAX36680.1| replication factor C 3 [synthetic construct]
gi|61364953|gb|AAX42630.1| replication factor C [synthetic construct]
gi|61367122|gb|AAX42955.1| replication factor C 3 [synthetic construct]
gi|61371558|gb|AAX43689.1| replication factor C 3 [synthetic construct]
Length = 357
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|354499511|ref|XP_003511852.1| PREDICTED: replication factor C subunit 3-like [Cricetulus griseus]
gi|344256817|gb|EGW12921.1| Replication factor C subunit 3 [Cricetulus griseus]
Length = 356
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 192 ICNVLSTVCKKEGLALPSKLAHRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|388453027|ref|NP_001253730.1| replication factor C subunit 3 [Macaca mulatta]
gi|402901747|ref|XP_003913802.1| PREDICTED: replication factor C subunit 3-like [Papio anubis]
gi|67970669|dbj|BAE01677.1| unnamed protein product [Macaca fascicularis]
gi|355700922|gb|EHH28943.1| Activator 1 subunit 3 [Macaca mulatta]
gi|355754623|gb|EHH58524.1| Activator 1 subunit 3 [Macaca fascicularis]
gi|380815322|gb|AFE79535.1| replication factor C subunit 3 isoform 1 [Macaca mulatta]
gi|383414017|gb|AFH30222.1| replication factor C subunit 3 isoform 1 [Macaca mulatta]
Length = 356
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|61367115|gb|AAX42954.1| replication factor C 3 [synthetic construct]
Length = 357
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|297693825|ref|XP_002824203.1| PREDICTED: replication factor C subunit 3 isoform 1 [Pongo abelii]
Length = 356
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|335772678|gb|AEH58141.1| replication factor C subunit 3-like protein, partial [Equus
caballus]
Length = 304
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 80 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 139
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 140 ICHVLTTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 199
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 200 EVYLRETANAIVSQQTPQR 218
>gi|318904079|ref|NP_001187655.1| replication factor C subunit 3 [Ictalurus punctatus]
gi|308323615|gb|ADO28943.1| replication factor c subunit 3 [Ictalurus punctatus]
Length = 356
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y G ++ CC+ SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHVLRRTMEKYMGTCRLILCCNSTSKVISPIRSRCLAVRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
+ V+ + ++EG+ LP +LA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 VCSVMMSVCKKEGLILPPELAKRIAEKSGRNLRKALLMCEACRVQQYPFSADQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANAIVNQQSPQR 270
>gi|4506489|ref|NP_002906.1| replication factor C subunit 3 isoform 1 [Homo sapiens]
gi|332242266|ref|XP_003270307.1| PREDICTED: replication factor C subunit 3 isoform 1 [Nomascus
leucogenys]
gi|426375153|ref|XP_004054410.1| PREDICTED: replication factor C subunit 3 isoform 1 [Gorilla
gorilla gorilla]
gi|3915601|sp|P40938.2|RFC3_HUMAN RecName: Full=Replication factor C subunit 3; AltName:
Full=Activator 1 38 kDa subunit; Short=A1 38 kDa
subunit; AltName: Full=Activator 1 subunit 3; AltName:
Full=Replication factor C 38 kDa subunit; Short=RF-C 38
kDa subunit; Short=RFC38
gi|18921089|gb|AAL82505.1|AF484446_1 replication factor C (activator 1) 3 (38kD) [Homo sapiens]
gi|1498259|gb|AAB07268.1| replication factor C, 38-kDa subunit [Homo sapiens]
gi|12652795|gb|AAH00149.1| Replication factor C (activator 1) 3, 38kDa [Homo sapiens]
gi|60812373|gb|AAX36209.1| replication factor C 3 [synthetic construct]
gi|119628942|gb|EAX08537.1| replication factor C (activator 1) 3, 38kDa, isoform CRA_a [Homo
sapiens]
gi|119628943|gb|EAX08538.1| replication factor C (activator 1) 3, 38kDa, isoform CRA_a [Homo
sapiens]
gi|123980104|gb|ABM81881.1| replication factor C (activator 1) 3, 38kDa [synthetic construct]
gi|123994885|gb|ABM85044.1| replication factor C (activator 1) 3, 38kDa [synthetic construct]
gi|261860576|dbj|BAI46810.1| replication factor C (activator 1) 3, 38kDa [synthetic construct]
Length = 356
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|410947258|ref|XP_003980368.1| PREDICTED: replication factor C subunit 3 [Felis catus]
Length = 351
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 127 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 186
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 187 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 246
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 247 EVYLRETANAIVSQQTPQR 265
>gi|148673951|gb|EDL05898.1| mCG17786, isoform CRA_b [Mus musculus]
Length = 289
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 151 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 210
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + +EG+ LP LA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 211 ICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 270
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 271 EVYLRETANAIVSQQTPQR 289
>gi|26335097|dbj|BAC31249.1| unnamed protein product [Mus musculus]
Length = 270
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + +EG+ LP LA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 192 ICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|149730139|ref|XP_001494707.1| PREDICTED: replication factor C subunit 3 [Equus caballus]
Length = 356
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLTTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|224094813|ref|XP_002310247.1| predicted protein [Populus trichocarpa]
gi|222853150|gb|EEE90697.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DK + M+W+++ Y K+ CC D S L+ +K+ C V+++ P E
Sbjct: 692 LVLYEVDKAPENIQPLMKWIMDCYTDACKLILCCEDDSDILETVKNRCKVLKVDAPVTHE 751
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA +E LP A KIA SK NLR+AI + EA + NYPF + Q I GWE
Sbjct: 752 IMEVLIQIARKEEFDLPMNFAAKIAAKSKQNLRKAIMALEACKAHNYPFSDDQPIPFGWE 811
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + +AT+I+ + SP +
Sbjct: 812 EVLVELATEILIDPSPNK 829
>gi|395855456|ref|XP_003800177.1| PREDICTED: replication factor C subunit 3 [Otolemur garnettii]
Length = 356
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLTLPSQLARRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|84370117|ref|NP_001033636.1| replication factor C subunit 3 [Bos taurus]
gi|426236447|ref|XP_004012180.1| PREDICTED: replication factor C subunit 3 [Ovis aries]
gi|108860923|sp|Q2TBV1.1|RFC3_BOVIN RecName: Full=Replication factor C subunit 3; AltName:
Full=Activator 1 38 kDa subunit; Short=A1 38 kDa
subunit; AltName: Full=Activator 1 subunit 3; AltName:
Full=Replication factor C 38 kDa subunit; Short=RF-C 38
kDa subunit; Short=RFC38
gi|83638731|gb|AAI09607.1| Replication factor C (activator 1) 3, 38kDa [Bos taurus]
gi|296481817|tpg|DAA23932.1| TPA: replication factor C subunit 3 [Bos taurus]
gi|440909972|gb|ELR59817.1| Replication factor C subunit 3 [Bos grunniens mutus]
Length = 356
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|327268843|ref|XP_003219205.1| PREDICTED: replication factor C subunit 3-like [Anolis
carolinensis]
Length = 356
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS +
Sbjct: 132 VILTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPAPSIGD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA++IA+ S NLR+A+ EA R +PF Q I T W
Sbjct: 192 ICSVLSNVCKKEGLVLPQELAQRIAEKSGRNLRKALLMCEACRVQQHPFTPDQDISETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ EQ+P++
Sbjct: 252 EVYLRETANAIVSEQTPQR 270
>gi|355716184|gb|AES05530.1| replication factor C 3, 38kDa [Mustela putorius furo]
Length = 374
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 151 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 210
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 211 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFSADQEIPETDW 270
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 271 EVYLRETANAIVSQQTPQR 289
>gi|54696204|gb|AAV38474.1| replication factor C (activator 1) 3, 38kDa [Homo sapiens]
gi|61357169|gb|AAX41345.1| replication factor C 3 [synthetic construct]
Length = 356
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAILSQQTPQR 270
>gi|301608991|ref|XP_002934079.1| PREDICTED: replication factor C subunit 3-like [Xenopus (Silurana)
tropicalis]
Length = 356
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS E
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRICAPSVDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA KIA+ S NLR+A+ EA R YPF Q + T W
Sbjct: 192 ICTVLFSVCKKEGLILPQELARKIAEKSGRNLRKALLMCEACRVQQYPFSADQDLPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYVKETANAIVSQQTPQR 270
>gi|296203698|ref|XP_002749009.1| PREDICTED: replication factor C subunit 3 [Callithrix jacchus]
Length = 356
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF V+ ++ T W
Sbjct: 192 ICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTVDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|413923603|gb|AFW63535.1| hypothetical protein ZEAMMB73_411986 [Zea mays]
Length = 740
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L + DK+S + ++W+++ K+ C D S L IKS C +I + PS +E
Sbjct: 515 IVLYDVDKVSQNNQRLIKWIIDSSSDACKIIMTCQDESNLLDSIKSRCKIISIGVPSTRE 574
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+V++L + + +E LP A IA+ S+ NLR+AI + EA + NYPF++GQ I GWE
Sbjct: 575 VVDILTYTSRKESFDLPTSFATTIANQSRKNLREAILALEACKANNYPFIDGQAIPLGWE 634
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + +A +I+++ +PK+
Sbjct: 635 EVLEELAVEILDDPAPKR 652
>gi|444707055|gb|ELW48364.1| Replication factor C subunit 3 [Tupaia chinensis]
Length = 356
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF ++ ++ T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTIDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|225709786|gb|ACO10739.1| Replication factor C subunit 3 [Caligus rogercresseyi]
Length = 357
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL E DKL+ DA +R +E+Y ++ C + SK+ P I+S C I++ PS E
Sbjct: 134 VILTEVDKLTKDAQHALRRTMEKYTSTCRLILCANSTSKVIPAIRSRCLSIRVPAPSIAE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
+ +++ +A++EG QLP +LA++IA+ S+ NLR+A+ EA + YPF + Q I+ W
Sbjct: 194 VTQIIISVAKKEGCQLPQELAKRIAERSQRNLRRALLLTEACKVKQYPFTDDQDIVDLDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A+ I+ EQ+PK+
Sbjct: 254 EVYLRETASMIVSEQTPKR 272
>gi|148226246|ref|NP_001089570.1| replication factor C (activator 1) 3, 38kDa [Xenopus laevis]
gi|67514211|gb|AAH98179.1| MGC115007 protein [Xenopus laevis]
Length = 356
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS E
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRVPAPSTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP LA +IA+ S NLR+A+ EASR YPF Q + T W
Sbjct: 192 ICTVLFSVCKKEGLVLPQDLARRIAEKSGRNLRKALLICEASRVQQYPFSADQDLPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYVKETANAIVSQQTPQR 270
>gi|124249204|ref|NP_081285.1| replication factor C subunit 3 [Mus musculus]
gi|30913256|sp|Q8R323.1|RFC3_MOUSE RecName: Full=Replication factor C subunit 3; AltName:
Full=Activator 1 38 kDa subunit; Short=A1 38 kDa
subunit; AltName: Full=Activator 1 subunit 3; AltName:
Full=Replication factor C 38 kDa subunit; Short=RF-C 38
kDa subunit; Short=RFC38
gi|20071210|gb|AAH26795.1| Rfc3 protein [Mus musculus]
gi|74188877|dbj|BAE39214.1| unnamed protein product [Mus musculus]
gi|74203125|dbj|BAE26250.1| unnamed protein product [Mus musculus]
gi|148673950|gb|EDL05897.1| mCG17786, isoform CRA_a [Mus musculus]
Length = 356
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + +EG+ LP LA ++A+ S NLR+A+ EA R YPF E Q I T W
Sbjct: 192 ICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|62896703|dbj|BAD96292.1| replication factor C 3 isoform 1 variant [Homo sapiens]
Length = 356
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS +
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEG 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|225713906|gb|ACO12799.1| Replication factor C subunit 3 [Lepeophtheirus salmonis]
Length = 296
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ C + SK+ P IKS C I++ PS +
Sbjct: 133 VLLNEVDKLTKDAQHALRRTMEKYTSTCRLILCSNSTSKIIPAIKSRCLSIRIPAPSADD 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
I+++L ++++EG LP +LA +I + S NLR+A+ EA + YPFV+GQ I+ W
Sbjct: 193 IIQILVTVSKKEGCLLPMELARRITEKSNRNLRRALLLTEACKVKQYPFVDGQDIVDLDW 252
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + + A I+ EQ+PK+
Sbjct: 253 EVYLKDTARMIVSEQTPKK 271
>gi|290561887|gb|ADD38341.1| Replication factor C subunit 3 [Lepeophtheirus salmonis]
Length = 353
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ C + SK+ P IKS C I++ PS +
Sbjct: 130 VLLNEVDKLTKDAQHALRRTMEKYTSTCRLILCSNSTSKIIPAIKSRCLSIRIPAPSADD 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
I+++L ++++EG LP +LA +I + S NLR+A+ EA + YPFV+GQ I+ W
Sbjct: 190 IIQILVTVSKKEGCLLPMELARRITEKSNRNLRRALLLTEACKVKQYPFVDGQDIVDLDW 249
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + + A I+ EQ+PK+
Sbjct: 250 EVYLKDTARMIVSEQTPKK 268
>gi|395520900|ref|XP_003764560.1| PREDICTED: replication factor C subunit 3 [Sarcophilus harrisii]
Length = 356
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSELAHRLAEKSCRNLRKALLMCEACRVQQYPFTSDQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EIYLRETANAIVSQQTPQR 270
>gi|321478378|gb|EFX89335.1| hypothetical protein DAPPUDRAFT_190647 [Daphnia pulex]
Length = 355
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL E DKL+ DA +R +E+Y ++ C + SK+ P++S C I++ PS+ +
Sbjct: 132 VILTEVDKLTKDAQHALRRTMEKYMTTCRLILCANSTSKIIAPLQSRCLAIRVPAPSQDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I++VL+ ++++EGI LP A ++A+ S+ NLR+A+ EA + YPF V+ +++ W
Sbjct: 192 IIKVLQMVSKKEGITLPADFAIRLAERSERNLRRALLMLEACKVQQYPFSVKQEIVEPDW 251
Query: 119 EDDITNIATKIIEEQSPK 136
E + K++ EQSPK
Sbjct: 252 EVYLRETGQKMVSEQSPK 269
>gi|241237969|ref|XP_002401228.1| replication factor C, subunit RFC3, putative [Ixodes scapularis]
gi|215496129|gb|EEC05770.1| replication factor C, subunit RFC3, putative [Ixodes scapularis]
Length = 353
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E DKL+ +A +R +E+Y ++ CC+ SK+ P I+S C +++ PS +
Sbjct: 131 VLLAEVDKLTREAQHALRRTMEKYMASCRLILCCNSCSKVIPAIRSRCLGVRVAAPSLDQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ +VL + +EG+QLP LA+ +A S NLR+A+ EA R YPF Q V W
Sbjct: 191 VADVLRLVCRKEGLQLPDALAQSVAAQSGRNLRRALLMLEACRVQQYPFSATQEVRRPDW 250
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A +++EQSPK+
Sbjct: 251 EVFLAATAHMVVQEQSPKR 269
>gi|126327443|ref|XP_001367742.1| PREDICTED: replication factor C subunit 3 [Monodelphis domestica]
Length = 356
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA ++A+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLNLPSELAHRLAEKSCRNLRKALLMCEACRVQQYPFTPDQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|159475545|ref|XP_001695879.1| DNA replication factor C complex subunit 3 [Chlamydomonas
reinhardtii]
gi|158275439|gb|EDP01216.1| DNA replication factor C complex subunit 3 [Chlamydomonas
reinhardtii]
Length = 356
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ CS+VSK ++P++S C +++ PS +
Sbjct: 135 LVLNEVDRLSKEAQQGLRRTMEKYSSACRLIMVCSNVSKVMEPVRSRCLCVRVAAPSDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
++EVL+ +A++E + LP A ++ D + NLR+A+ E R YPF + Q W
Sbjct: 195 VMEVLQGVAKKENLVLPEAFAARVVDYAGRNLRRALLCLEVCRAQQYPFGDSQEPQRADW 254
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I +A I++EQSPKQ
Sbjct: 255 ELYIAEVAKNIMDEQSPKQ 273
>gi|431903108|gb|ELK09284.1| Replication factor C subunit 3 [Pteropus alecto]
Length = 356
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I VL + ++EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q V T W
Sbjct: 192 ICHVLSSVCKKEGLTLPPQLAYRLAEKSCRNLRKALLMCEACRVQQYPFTADQEVPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|346470469|gb|AEO35079.1| hypothetical protein [Amblyomma maculatum]
Length = 388
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK+ P I+S C I++ PS +E
Sbjct: 165 VVLTEVDKLTKDAQHALRRTMEKYMATCRLVLCCNSCSKVIPAIRSRCLGIRVAAPSIEE 224
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
+ VL +A +E I LP LA IA S NLR+A+ EA R YPF + Q + W
Sbjct: 225 TITVLNLVARKENINLPDTLARTIAAQSHRNLRRAVLMLEACRAQQYPFSDNQKVRQPDW 284
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I++EQS K+
Sbjct: 285 EVYLEETARMIVQEQSVKR 303
>gi|66800141|ref|XP_628996.1| replication factor C subunit [Dictyostelium discoideum AX4]
gi|74996427|sp|Q54BN3.1|RFC3_DICDI RecName: Full=Probable replication factor C subunit 3; AltName:
Full=Activator 1 subunit 3
gi|60462442|gb|EAL60663.1| replication factor C subunit [Dictyostelium discoideum AX4]
Length = 347
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E DKLS DA +R +E+Y ++ CC +K + PIKS C I++ PS++E
Sbjct: 132 VILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCLGIRVPAPSQEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I +VL +A E LP +LA +A S NLR A+ E+ + YPF ++ L WE
Sbjct: 192 IEKVLAKVATAEKFDLPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPFQSTELPLLDWE 251
Query: 120 DDITNIATKIIEEQSPKQ 137
+ I+ I EEQSP +
Sbjct: 252 NYISQIVKDCFEEQSPAR 269
>gi|221121640|ref|XP_002167209.1| PREDICTED: replication factor C subunit 3-like [Hydra
magnipapillata]
Length = 355
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ CC+ SK + I+S C I++ PS +E
Sbjct: 132 ILLMEVDRLTKDAQHALRRTMEKYVATCRLILCCNSTSKVISAIQSRCLGIRVPSPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
+V+ L + ++EG+ LP +LA +IA ++ N+R+A+ EA R YPF Q I W
Sbjct: 192 VVQTLNSVCKKEGLNLPSELANRIAQKAEGNMRRALLMCEACRVQQYPFTADQSIQEADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A IIE+Q+P++
Sbjct: 252 ETYLKQTANMIIEQQTPQR 270
>gi|225706298|gb|ACO08995.1| Replication factor C subunit 3 [Osmerus mordax]
Length = 356
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK + PI+S C I++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCLAIRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
+ VL + +EG+ LP +LA++I++ S NLR+A+ EA R YPF V+ + T W
Sbjct: 192 VCGVLSAVCRKEGLTLPPELAQQISEKSGRNLRKALLMCEACRVQQYPFSVDQSIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANAIVSQQSPQR 270
>gi|156383529|ref|XP_001632886.1| predicted protein [Nematostella vectensis]
gi|156219948|gb|EDO40823.1| predicted protein [Nematostella vectensis]
Length = 355
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK+ P I+S C +++ PS +E
Sbjct: 132 VVLTEVDRLTKDAQHALRRTMEKYTSTCRLILCCNSTSKVIPAIRSRCLGVRIPAPSVEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I ++L+F+ ++EG+ +P +L+ +IA+ S NLR+A+ EA + YPF Q + W
Sbjct: 192 ICQILQFVCKKEGLTIPSELSRRIAEKSGRNLRKALLMCEACKVQQYPFTPDQPVQEADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A +I++ Q+P++
Sbjct: 252 EMYLRETAQQIVQTQTPRR 270
>gi|307203721|gb|EFN82681.1| Replication factor C subunit 3 [Harpegnathos saltator]
Length = 354
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ P+ E
Sbjct: 131 VLLSNVDQLTRDAQHALRRTMEKYISTCRLILCANSTSRVLPAIRSRCVRIRVPAPTASE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I +L I +EG+ LP +LA +I + S NLR+AI EAS+ YPF Q I W
Sbjct: 191 IKNILHSICRREGLSLPDELANRIIEASDRNLRRAILMLEASKVEQYPFTTNQKITEPDW 250
Query: 119 EDDITNIATKIIEEQSPK 136
+ I N ATK+I EQSPK
Sbjct: 251 QVYIRNTATKMISEQSPK 268
>gi|298714917|emb|CBJ27673.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 361
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L D+L+ A +R +ERY ++ C SK ++P++S C +++ PS+ E
Sbjct: 141 VVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESE 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ VL + +E + LP LA ++A SK NLR+A+ EA R YPF E Q V +T W
Sbjct: 201 VCSVLTSVCRKESLTLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDW 260
Query: 119 EDDITNIATKIIEEQSPKQ 137
E+ IT +A +++ EQSP++
Sbjct: 261 ENYITQLAREVVLEQSPRR 279
>gi|356540777|ref|XP_003538861.1| PREDICTED: uncharacterized protein LOC100795321 [Glycine max]
Length = 731
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L + K + ++W+++RY + K+ CC D + L +P+K+ VIQ+ P E
Sbjct: 511 IVLYDVHKAVDNIQHIIKWIIDRYSDICKLVLCCEDDADLIEPVKNRFKVIQVDAPQNHE 570
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA+ E I L A KIA SK NLR+AI + EA NYPF E Q I GWE
Sbjct: 571 IIEVLIQIAKNEEIDLSVNFAAKIATKSKQNLRKAIMALEACNAHNYPFSEEQPIPVGWE 630
Query: 120 DDITNIATKIIEEQS 134
+ + +A +I+ + S
Sbjct: 631 EIVIEVAAEILADPS 645
>gi|156230598|gb|AAI52282.1| Replication factor C (activator 1) 3 [Danio rerio]
Length = 356
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPLPSVEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
+ VL + +EG+ LP +LA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 VCSVLSGVCRKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYPFSPDQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANAIVSQQSPQR 270
>gi|41393079|ref|NP_958865.1| replication factor C subunit 3 [Danio rerio]
gi|27503431|gb|AAH42327.1| Replication factor C (activator 1) 3 [Danio rerio]
gi|182891582|gb|AAI64808.1| Rfc3 protein [Danio rerio]
Length = 356
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPLPSVEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
+ VL + +EG+ LP +LA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 192 VCSVLSGVCRKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYPFSPDQDIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANAIVSQQSPQR 270
>gi|323456769|gb|EGB12635.1| hypothetical protein AURANDRAFT_69595 [Aureococcus anophagefferens]
Length = 353
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ A +R +E+ ++ CC++ SK + P++S C I++ P++ E
Sbjct: 133 VLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAE 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV VL+ +A +E + LP LA +IA SK NLR+AI S E + YPF Q + L W
Sbjct: 193 IVAVLDDVAARERLDLPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDW 252
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + IA+ I EQSP++
Sbjct: 253 EQYVVAIASDIAREQSPQR 271
>gi|260833022|ref|XP_002611456.1| hypothetical protein BRAFLDRAFT_113525 [Branchiostoma floridae]
gi|229296827|gb|EEN67466.1| hypothetical protein BRAFLDRAFT_113525 [Branchiostoma floridae]
Length = 356
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ CC SK+ P I+S C +++ PS Q+
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYVTTCRLILCCESTSKVIPAIRSRCLGVRVPAPSNQQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I +L+ + ++EG+ L +LA +IAD S NLR+AI EA + YPF Q V+ W
Sbjct: 192 ICSILQTVCKKEGLTLSPELAGRIADKSGRNLRRAILMLEACKVQQYPFRPDQPVVEADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVFLRETANAIVSQQSPRR 270
>gi|224043287|ref|XP_002195786.1| PREDICTED: replication factor C subunit 3 [Taeniopygia guttata]
Length = 356
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L + DKL+ DA +R +E+Y ++ CC+ VSK+ PI+S C I++ PS ++
Sbjct: 132 VLLTDVDKLTKDAQHALRRTMEKYMATCRLILCCNSVSKIIGPIQSRCLAIRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA++IA+ S NLR+A+ E+ R YPF Q I W
Sbjct: 192 ICHVLSSVCKKEGLTLPQELAQRIAEKSGRNLRKALLMCESCRVQQYPFSADQDIPEMDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVGQQTPQR 270
>gi|326914292|ref|XP_003203460.1| PREDICTED: replication factor C subunit 3-like [Meleagris
gallopavo]
Length = 344
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ +SK+ PI+S C +++ PS ++
Sbjct: 120 VLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSISKIIGPIQSRCLTVRVPAPSIED 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA+++A+ S NLR+A+ E+ R YPF Q I W
Sbjct: 180 ICHVLSSVCKKEGLTLPQELAQRLAEKSGRNLRKALLMCESCRVQQYPFSADQDIPEMDW 239
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 240 EIYLRETANAIVSQQTPQR 258
>gi|149635763|ref|XP_001509935.1| PREDICTED: replication factor C subunit 3-like [Ornithorhynchus
anatinus]
Length = 356
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIPPIRSRCLAVRVPAPSVED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP LA ++A+ + NLR+A+ EA + YPF Q I T W
Sbjct: 192 ICHVLSTVCKKEGLSLPPALARRLAEKANRNLRKALLMCEACKVQQYPFTADQEIPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|57529302|ref|NP_001006276.1| replication factor C subunit 3 [Gallus gallus]
gi|53133448|emb|CAG32053.1| hypothetical protein RCJMB04_16m20 [Gallus gallus]
Length = 356
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC+ +SK+ PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSISKIIGPIQSRCLSVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP +LA+++A+ S NLR+A+ E+ R YPF Q I W
Sbjct: 192 ICHVLSSVCKKEGLNLPPELAQRLAEKSGRNLRKALLMCESCRVQQYPFSADQDIPEMDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EICLRETANAIVSQQSPQR 270
>gi|303281866|ref|XP_003060225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458880|gb|EEH56177.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 356
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 7 DKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQEIVEVLE 65
D LS +A +R +E+Y ++ C+ VSK L ++S C I++ PS E+ +L
Sbjct: 142 DNLSKEAQHGLRRTMEKYSQACRLVLVCNSVSKVLDAVRSRCLPIRVAAPSTTEVEALLH 201
Query: 66 FIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGWEDDITN 124
+A++E + LP +LA ++A +S+ N+R+A+ S EA R YPF QV+ T WE +
Sbjct: 202 DVAKREKLTLPPELAGRVAAHSERNMRRALLSLEACRAHQYPFTPDQVVQGTDWEAYVAQ 261
Query: 125 IATKIIEEQSPKQ 137
IA +I++EQSPK+
Sbjct: 262 IANEILQEQSPKR 274
>gi|340383712|ref|XP_003390360.1| PREDICTED: replication factor C subunit 3-like [Amphimedon
queenslandica]
Length = 312
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E Y G + C+ SKL P IKS C +++ P+ E
Sbjct: 88 VVLTEVDRLTKDAQHALRRTMELYTGTCHLILVCNSTSKLIPAIKSRCLAVRVPAPTIDE 147
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL+++ +E + +P LA+KIA+ S+ +LR+AI E R YPF + QV+ W
Sbjct: 148 ICSVLQYVCHKESLTIPDTLAKKIAEKSERSLRKAILLCEVCRVQQYPFNDDQVVPDCEW 207
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A II EQSPK+
Sbjct: 208 EVFLRETAAMIITEQSPKR 226
>gi|344275394|ref|XP_003409497.1| PREDICTED: replication factor C subunit 3 [Loxodonta africana]
Length = 356
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ C+ SK + PI+S C +++ PS ++
Sbjct: 132 VLLTEVDKLTRDAQHALRRTMEKYMSTCRLILYCTSTSKVIAPIRSRCLAVRVPAPSIED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + +EG+ LP QLA ++A+ S NLR+A+ EA R YPF Q I + W
Sbjct: 192 ICHVLSTVCRKEGLTLPAQLARRLAEKSCRNLRKALLMCEACRVQQYPFTADQDIPESDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +QSP++
Sbjct: 252 EVYLRETANAIVSQQSPQR 270
>gi|320162792|gb|EFW39691.1| replication factor C subunit [Capsaspora owczarzaki ATCC 30864]
Length = 356
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKLS DA +R +E Y ++ C+ SK L PI+S C I++ P+
Sbjct: 142 VVLTEVDKLSKDAQHALRRTMELYVSTCRLILLCNSTSKVLSPIRSRCLGIRIPAPT--- 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
V E IA +EGI + A +IA++S NLR+AI SFEA R YPFV Q I W
Sbjct: 199 ---VPESIARKEGISVSGDFATRIAESSDRNLRKAILSFEACRVQQYPFVSNQPIQKADW 255
Query: 119 EDDITNIATKIIEEQSPK 136
E + A++I+ EQSPK
Sbjct: 256 EVYVEQTASEILGEQSPK 273
>gi|325182836|emb|CCA17291.1| replication factor C subunit 3 putative [Albugo laibachii Nc14]
Length = 352
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E D+LS A +R +E+Y ++ CC+ SK+ +P++S C I + P+ +E
Sbjct: 132 VLLMEVDRLSKHAQHALRRTMEKYTATCRLILCCNSSSKIIEPLRSRCLGICVSAPTNRE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VLE + + EGI L EKIA S NLR+A+ E YPF E Q I L W
Sbjct: 192 ICNVLESVCKNEGISYLPSLGEKIAQQSDRNLRRALLILETCHVQRYPFAEDQEIQLPAW 251
Query: 119 EDDITNIATKIIEEQSP 135
E+ I ++ +++EQSP
Sbjct: 252 EEYICTLSKVVLQEQSP 268
>gi|158299762|ref|XP_319799.4| AGAP009047-PA [Anopheles gambiae str. PEST]
gi|157013673|gb|EAA14768.4| AGAP009047-PA [Anopheles gambiae str. PEST]
Length = 358
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ C + S++ P +KS C I++ P++ E
Sbjct: 132 IVLSEVDELTKDAQHALRRTMEKYVATCRLILCVNSTSRIIPAVKSRCLGIRVSAPTEDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
IV ++ I ++E + +P +LA +IA S+ NLR+AI + EA + M YPF Q I W
Sbjct: 192 IVSIMNSICKKENLHIPPELATRIAQKSERNLRRAILTLEACKVMQYPFTANQEIPDMDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A I++EQ+P++
Sbjct: 252 QTYLKETANMIVQEQTPQR 270
>gi|157116416|ref|XP_001658466.1| Rfc5p, putative [Aedes aegypti]
gi|108876490|gb|EAT40715.1| AAEL007581-PA [Aedes aegypti]
Length = 358
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ C + S++ P +KS C I++ P+ +E
Sbjct: 132 IVLSEVDELTKDAQHALRRTMEKYVATCRLVLCVNSTSRVIPAVKSRCLGIRVSAPTNEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
IV +L I ++EG+ +P +LA +I + S+ NLR+AI EA + YPF V +V W
Sbjct: 192 IVSILNNICKKEGLHIPSELATRITEKSERNLRRAILMLEACKVQQYPFTVNQEVPEIDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A +I++EQSP++
Sbjct: 252 QVFLRETANQIVQEQSPQK 270
>gi|357483535|ref|XP_003612054.1| Replication factor C subunit [Medicago truncatula]
gi|355513389|gb|AES95012.1| Replication factor C subunit [Medicago truncatula]
Length = 733
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
II+ + +K + + ++W+++RY + K+ CC D + +K+ VI + P E
Sbjct: 537 IIIYDVEKAAENIQHLIKWIIDRYSDICKLVLCCEDDENIIAQVKNRFKVINVDAPQTHE 596
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA +E + L A KIA SK NLR+AI + EA R NYPF E Q I GWE
Sbjct: 597 IIEVLTQIANKEEMDLSMNFAMKIATKSKQNLREAILALEACRAHNYPFSEEQPIPVGWE 656
Query: 120 DDITNIATKIIEEQS 134
+ +AT+I+ + S
Sbjct: 657 KIVIEVATEILTDPS 671
>gi|432895956|ref|XP_004076244.1| PREDICTED: replication factor C subunit 3-like [Oryzias latipes]
Length = 356
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E D+L+ DA +R +E+Y ++ C + SK + PI+S C +++ PS +E
Sbjct: 132 VILTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIRSRCLAVRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ VL + ++EG+ LP +LA++I++ S NLR+A+ EA R YPF Q V T W
Sbjct: 192 VCSVLTSVCKKEGLNLPPELAKQISEKSGRNLRKALLMCEACRVQQYPFSADQEVPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQNPQR 270
>gi|412989140|emb|CCO15731.1| replication factor C subunit 3 [Bathycoccus prasinos]
Length = 410
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ V++ L+ ++S C +++ P ++
Sbjct: 190 LVLTECDKLSKEAQHGLRRTMEKYSSACRLILIADSVNRVLEAVRSRCLPVRVAAPRAED 249
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL IA +E + LP QL K+A +K +LR+AI + EA R NYPF E Q + T W
Sbjct: 250 IEKVLYDIAAKEKLTLPPQLCSKVAVFAKRDLRRAILALEACRVANYPFKETQSVQTTDW 309
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+ EQSPK+
Sbjct: 310 ELYIAQIAAEILAEQSPKR 328
>gi|291001551|ref|XP_002683342.1| predicted protein [Naegleria gruberi]
gi|284096971|gb|EFC50598.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L E D L+ +A +R ++E+Y ++ C + SK+ PI+S C +++ PS +E
Sbjct: 139 IVLHEVDSLTREAQQALRRIMEKYSKSCRLILCANSTSKIIPPIRSRCMAVRIPAPSDEE 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG-QVILTGW 118
I VL+F+A++E I+L ++ ++I + N+R+A+ E+++ YPF + QV L GW
Sbjct: 199 ISTVLQFVAKKENIKLVPEITQQICEKCDGNMRRALLMLESAKVEQYPFTKDQQVKLPGW 258
Query: 119 EDDITNIATKIIEEQSPK 136
E + IA II +Q+P+
Sbjct: 259 EKFVEEIAKSIIADQTPQ 276
>gi|170031637|ref|XP_001843691.1| replication factor C subunit 3 [Culex quinquefasciatus]
gi|167870519|gb|EDS33902.1| replication factor C subunit 3 [Culex quinquefasciatus]
Length = 358
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ C + S++ P +KS C I++ P+ +E
Sbjct: 132 IVLSEVDELTKDAQHALRRTMEKYVATCRLVLCVNSTSRVIPAVKSRCLGIRVSAPTGEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
IV +L I ++EG+ +P +LA +I S NLR+AI EA + YPF GQ V W
Sbjct: 192 IVGILNNICKKEGLHIPPELATRITQKSDRNLRRAILMLEACKVQQYPFTVGQDVPEIDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A +I++EQSP +
Sbjct: 252 QVFLRETANQIVQEQSPAK 270
>gi|348541665|ref|XP_003458307.1| PREDICTED: replication factor C subunit 3-like [Oreochromis
niloticus]
Length = 356
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ C + SK + PI+S C I++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCLAIRVPLPSIEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
+ VL + ++EG+ LP +LA++I++ S NLR+A+ EA R YPF V+ V T W
Sbjct: 192 VCSVLTSVCKKEGLVLPPELAKQISEKSGRNLRKALLMCEACRVQQYPFSVDQDVPETDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 252 EVYLRETANAIVSQQTPQR 270
>gi|383854644|ref|XP_003702830.1| PREDICTED: replication factor C subunit 3-like [Megachile
rotundata]
Length = 355
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P IKS C I++ PS +
Sbjct: 132 VLLTNVDQLTKDAQHALRRTMEKYVATCRIILCANSTSRVLPAIKSRCLGIRVPAPSISD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I +L I ++EG+ LP++L ++A+ S NLR+AI EA R YPF Q I W
Sbjct: 192 IKSILHSICKREGLTLPNELGIRVAEASGRNLRRAILMLEACRVEQYPFTADQNIAEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I N A ++ EQSPK+
Sbjct: 252 QVYIRNTANMMVSEQSPKK 270
>gi|307106826|gb|EFN55071.1| hypothetical protein CHLNCDRAFT_35851 [Chlorella variabilis]
Length = 354
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ C ++VSK + P++S C I++ PS +
Sbjct: 134 LVLNEVDQLSKEAQHSLRRTMEKYSAACRLVLCGNNVSKVIDPVRSRCLCIRVAAPSLAQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ E ++ +A E + LP LA+++A S+ NLR+A+ S EA + YPF E Q V W
Sbjct: 194 VEEQVQAVAAHERLTLPVPLAKRLAAASERNLRRALLSLEACKVAQYPFAEDQEVAAPDW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA ++ EQ+PK+
Sbjct: 254 ELYIREIAADVMLEQTPKR 272
>gi|299749385|ref|XP_001838721.2| DNA clamp loader [Coprinopsis cinerea okayama7#130]
gi|298408416|gb|EAU83080.2| DNA clamp loader [Coprinopsis cinerea okayama7#130]
Length = 314
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + SKL PIKS C +I++ P+++E
Sbjct: 110 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSKLIAPIKSRCLLIRVAAPNEEE 169
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL ++A + G LP + A++I D+S NLR+AI EA + M P + G + +
Sbjct: 170 MATVLNYVARRAGFDLPPEAAKEIIDDSGGNLRKAILVLEALK-MQSPDLTGPLTIAKPD 228
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+ EQSP Q
Sbjct: 229 WETYCHKVADLIVMEQSPAQ 248
>gi|356495392|ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817775 [Glycine max]
Length = 718
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L + K + ++W+++RY + K+ CC D + + + +K+ VIQ+ P E
Sbjct: 498 IVLYDVHKAVDNIRHIIKWIIDRYSDICKLVLCCEDDADIIEHVKNRFKVIQVDAPQNHE 557
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+EVL IA+ E I L A KIA SK NLR+AI + EA + NYPF Q I GWE
Sbjct: 558 IIEVLIQIAKNEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSAEQPIPVGWE 617
Query: 120 DDITNIATKIIEEQS 134
+ + +A +I+ + S
Sbjct: 618 EIVIEVAAEILADPS 632
>gi|66523693|ref|XP_624376.1| PREDICTED: replication factor C subunit 3 [Apis mellifera]
Length = 355
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ PS +
Sbjct: 132 VLLTNVDQLTKDAQHALRRTMEKYVATCRLILCANSTSRVLPAIRSRCLGIRVPAPSIKN 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I ++L I ++EG+ LP +LA ++A+ S NLR+AI EA + YPF Q I W
Sbjct: 192 IKDILHTICKREGLTLPDELATRLAETSGRNLRRAILMLEACKVEQYPFTADQNITEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I N A ++ EQSPK+
Sbjct: 252 QVYIRNTANMMVSEQSPKK 270
>gi|380021906|ref|XP_003694797.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 3-like
[Apis florea]
Length = 355
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ PS +
Sbjct: 132 VLLTNVDQLTKDAQHALRRTMEKYVATCRLILCANSTSRVLPAIRSRCLGIRVPAPSIKN 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I ++L I ++EG+ LP +LA ++A+ S NLR+AI EA + YPF Q I W
Sbjct: 192 IKDILHTICKREGLTLPDELATRLAETSGRNLRRAILMLEACKVEQYPFTGDQNITEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I N A ++ EQSPK+
Sbjct: 252 QVYIRNTANMMVSEQSPKK 270
>gi|308803597|ref|XP_003079111.1| putative replication factor (ISS) [Ostreococcus tauri]
gi|116057566|emb|CAL53769.1| putative replication factor (ISS) [Ostreococcus tauri]
Length = 397
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++F SK + ++S C I++ PS +E
Sbjct: 177 LVLTEVDRLSREAQYGLRRTMEKYSASCRLFLIAERPSKVMDALQSRCLPIRVPGPSIEE 236
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +L +A++E ++LP +LA ++A S N+R+A+ + E R MNYPF Q + T W
Sbjct: 237 IENLLHEVAKKEKLELPPELATRVAQASGRNMRRALLTLETCRVMNYPFKPTQAVQTTDW 296
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I I ++I+ EQSP +
Sbjct: 297 ELYINQIGSEILAEQSPSR 315
>gi|410926989|ref|XP_003976950.1| PREDICTED: replication factor C subunit 3-like [Takifugu rubripes]
Length = 356
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ C + SK + PI+S C I++ PS +E
Sbjct: 132 VLLTEVDRLTKDAQHALRRTMEKYTATCRLILCSTSTSKVIGPIRSRCLAIRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
+ VL + ++EG+ LP +LA++I++ S NLR+A+ EA R YPF Q I + W
Sbjct: 192 VCSVLTAVCKKEGLLLPPELAKQISERSGRNLRKALLMCEACRVQQYPFSADQEIPVADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ A I+ +QSP++
Sbjct: 252 VIYLRETANAIVSQQSPQR 270
>gi|345492555|ref|XP_001600907.2| PREDICTED: replication factor C subunit 3-like [Nasonia
vitripennis]
Length = 355
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D L+ DA +R +E+Y G ++ C + S++ P I+S C I++ P+ E
Sbjct: 132 VLLTNVDHLTKDAQHALRRTMEKYVGTCRLILCSNSTSRVLPAIRSRCLGIRVPAPTTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I +L +A++E + +P +LA ++A +S NLR+AI EA + YPF Q I W
Sbjct: 192 IKSILHSVAKKESLTIPDELASRLAGSSGRNLRRAILMLEACKVEQYPFTADQKITEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I IA+ ++ EQSP++
Sbjct: 252 QIYIKGIASMMVSEQSPRK 270
>gi|47227059|emb|CAG00421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 356
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E+Y ++ C + SK + PI+S C +++ PS +E
Sbjct: 132 VVLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIQSRCLAVRVPLPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
+ VL + ++EG+ LP +LA +I++ S NLR+A+ EA R YPF E ++ + W
Sbjct: 192 VCGVLTAVCKKEGLHLPPELARQISEASGRNLRRALLMCEACRVQQYPFSAEQEIPVADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ A I+ +QSP++
Sbjct: 252 VIYLRETANAIVSQQSPQR 270
>gi|301092501|ref|XP_002997106.1| replication factor C subunit 3 [Phytophthora infestans T30-4]
gi|262111642|gb|EEY69694.1| replication factor C subunit 3 [Phytophthora infestans T30-4]
Length = 352
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ CC++ SK + P++S C +++ P+ +
Sbjct: 132 VLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTTDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +L+ + +EG+ L ++IA S+ NLR+A+ E R NYPF Q I L W
Sbjct: 192 ICTILQGVCSKEGLDYCAPLGKEIALKSERNLRRALLMLETCRVQNYPFSPDQQIQLPAW 251
Query: 119 EDDITNIATKIIEEQSP 135
E+ I ++A +++EQSP
Sbjct: 252 EEYICSLAKVVLQEQSP 268
>gi|348667977|gb|EGZ07802.1| hypothetical protein PHYSODRAFT_340838 [Phytophthora sojae]
Length = 352
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS A +R +E+Y ++ CC++ SK + P++S C +++ P+ E
Sbjct: 132 VLLMEVDRLSKGAQHALRRTMEKYTATCRLVLCCNNPSKVIDPLRSRCLGVRVGAPTTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ + +EG+ L ++IA S+ NLR+A+ E R NYPF Q I L W
Sbjct: 192 ICGVLQGVCSKEGLAYCAPLGQEIAVKSERNLRRALLMLETCRVQNYPFSPDQQIQLPAW 251
Query: 119 EDDITNIATKIIEEQSP 135
E+ I +++ +++EQSP
Sbjct: 252 EEYICSLSKVVLQEQSP 268
>gi|405950338|gb|EKC18333.1| Replication factor C subunit 3 [Crassostrea gigas]
Length = 354
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E DKL+ DA +R +E+Y ++ CC SK+ P I+S C I++ PS E
Sbjct: 131 VLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCVSTSKVIPAIRSRCLGIRVAAPSIDE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I ++L+ + ++EG +P +LA+++A+ SK NLR+A+ EA + P Q V W
Sbjct: 191 ITQILQTVCKKEGCPIPTELAKRVAEKSKRNLRRALLMAEACKVQQTPLKPDQEVSEPDW 250
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A II++QSP++
Sbjct: 251 EVYLRETANMIIQQQSPRR 269
>gi|193659798|ref|XP_001951302.1| PREDICTED: replication factor C subunit 3-like [Acyrthosiphon
pisum]
Length = 355
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ +A +R +E+Y ++ C + + ++ P I+S C +++ P+ ++
Sbjct: 132 ILLTEVDRLTKEAQQALRRTMEKYMATCRIILCANSIGQVIPAIRSRCLAVRVPAPTHED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I ++L+ I ++EG+ LP +LA I+ N + NLR+AI EAS+ YPF V+ V++ W
Sbjct: 192 ICKILKTICKKEGLTLPDELALIISQNCERNLRRAILMLEASKVKQYPFDVKQSVVVPDW 251
Query: 119 EDDITNIATKIIEEQSP 135
+ I + A +I+ +Q+P
Sbjct: 252 QLYIGDTAKQILSQQTP 268
>gi|312066686|ref|XP_003136388.1| activator 1 38 kDa subunit [Loa loa]
gi|307768452|gb|EFO27686.1| activator 1 38 kDa subunit [Loa loa]
Length = 354
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEI 60
+L EAD+L+ DA +R +E+Y ++ CC +SK+ P+KS C +++ PS ++
Sbjct: 133 VLMEADQLTRDAQNALRRTMEKYAQSCRLILCCDSISKIIDPLKSRCLAVRVAAPSDDDV 192
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-WE 119
+ + F+ +QE + +P + + + + N+R+A+ EA++ NYPF E Q I WE
Sbjct: 193 AKAVRFVCKQENVSVPDSIVDAVVQKANGNMRRALLMIEAAKVQNYPFKENQEIPDPEWE 252
Query: 120 DDITNIATKIIEEQSPK 136
+ A +I++Q+P+
Sbjct: 253 VYLRETAKMMIQQQNPE 269
>gi|198425284|ref|XP_002119398.1| PREDICTED: similar to Replication factor C (activator 1) 3 [Ciona
intestinalis]
Length = 355
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ C+ SK+ P I+S C +++ PS +
Sbjct: 132 IVLTEVDRLTRDAQHALRRTMEKYMSTCRLILYCNSTSKVIPAIQSRCLAVRVAAPSIDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
++++L + ++EG +P +LA +IA SK NLR+A+ E R + P + Q I+ W
Sbjct: 192 VIKILTSVGKKEGHPIPQELARRIAVASKRNLRRALLMSETCRVQHVPLTDDQTIMEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ EQSP++
Sbjct: 252 ELYLKETANMIVSEQSPRR 270
>gi|302835774|ref|XP_002949448.1| DNA replication factor C complex subunit 3 [Volvox carteri f.
nagariensis]
gi|300265275|gb|EFJ49467.1| DNA replication factor C complex subunit 3 [Volvox carteri f.
nagariensis]
Length = 355
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ C+++SK ++P++S C +++ P+ +
Sbjct: 134 LVLNEVDRLSREAQQGLRRTMEKYSSACRIVMVCNNISKVMEPVRSRCLCVRVAAPTDDQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
++EVL +A++E + LP A ++ D + ++R+A+ + E + YPF + Q W
Sbjct: 194 MMEVLAGVAKKENLTLPPVFAARLVDYASRSMRRALLALEVCKVERYPFGDDQEPNRADW 253
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I +A I+EEQSPKQ
Sbjct: 254 ELYIAEVAKNILEEQSPKQ 272
>gi|255082302|ref|XP_002504137.1| predicted protein [Micromonas sp. RCC299]
gi|226519405|gb|ACO65395.1| predicted protein [Micromonas sp. RCC299]
Length = 355
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++ C+ VSK L ++S C +++ PS +
Sbjct: 135 LLLNEVDRLSKEAQHGLRRTMEKYSSACRLILICTSVSKVLDAVRSRCLPVRVAAPSVET 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ +++ +A++E + +P +LA ++A +S+ N+R+ + S EA R YPF Q V L W
Sbjct: 195 VEKLVMDVAQKEKLVMPPELAARLALHSERNMRRCLLSMEACRVQQYPFKADQPVQLCDW 254
Query: 119 EDDITNIATKIIEEQSPKQ 137
E +T IA +I++EQ+PK+
Sbjct: 255 EAYVTQIANEILQEQTPKR 273
>gi|322794004|gb|EFZ17242.1| hypothetical protein SINV_07523 [Solenopsis invicta]
Length = 353
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ P+ E
Sbjct: 131 VLLSNVDQLTKDAQHALRRTMEKYISTCRLILCANSTSRVLPAIRSRCVRIRVPAPTASE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I +L I ++EG+ LP +LA ++ + S NLR+AI EA + YPF V+ ++ W
Sbjct: 191 IKSILHSICKREGLTLPDELANRLIEASDRNLRRAILMLEACKVEQYPFTVDQKISQPDW 250
Query: 119 EDDITNIATKIIEEQSPK 136
+ I N A+ ++ EQSPK
Sbjct: 251 QVFIRNTASMMVSEQSPK 268
>gi|332020714|gb|EGI61119.1| Replication factor C subunit 3 [Acromyrmex echinatior]
Length = 354
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ P+ E
Sbjct: 131 VLLSNVDQLTRDAQHALRRTMEKYISTCRLILCANSTSRVLPAIQSRCVRIRVPAPTAPE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I +L I ++EG+ LP +LA ++ + S NLR+AI EA + YPF V+ +V W
Sbjct: 191 IKNILHSICKREGLTLPDELANRMVEVSNRNLRRAILMLEACKVEQYPFTVDQKVTEPDW 250
Query: 119 EDDITNIATKIIEEQSPK 136
+ I N A+ ++ EQSPK
Sbjct: 251 QVYIRNTASMMVSEQSPK 268
>gi|170096496|ref|XP_001879468.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645836|gb|EDR10083.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 356
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C + SKL PIKS C ++++ PS +E
Sbjct: 132 VIINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSKLIAPIKSRCLLMRVPAPSPEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
++ VLE +A + G LP + KI D+ N+R+AI EA + M P + G + +
Sbjct: 192 MLNVLELVARRAGFDLPPEAGMKIVDDCGGNMRKAILVLEALK-MQSPDLTGPLTIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+ EQSP +
Sbjct: 251 WETYCHKVADLIVSEQSPAR 270
>gi|390594649|gb|EIN04059.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 356
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ PS++E
Sbjct: 132 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLVRVGAPSEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
++ VL +A+ EG LP A +IA ++ NLR+A+ EA + M P + G + +
Sbjct: 192 MMRVLAHVAKGEGFDLPPDAAAEIARDANGNLRKALLVLEALK-MQSPDLSGPLSIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQSP++
Sbjct: 251 WETYCHKVADMIVQEQSPQR 270
>gi|195030434|ref|XP_001988073.1| GH10966 [Drosophila grimshawi]
gi|193904073|gb|EDW02940.1| GH10966 [Drosophila grimshawi]
Length = 356
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ +
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIILSVNSTSRIIPAIRSRCLGIRVPAPSESD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
+ VL+ ++EG+ LP +LA+++ D S+ N+R+A+ EAS+ YPF Q I+ W
Sbjct: 192 MAAVLQNTCKREGLVLPPELAKRVVDKSERNMRRALLMLEASKVQQYPFTAQQEIVELDW 251
Query: 119 EDDITNIATKIIEEQSP 135
+ + AT+I+ EQ+P
Sbjct: 252 QVYLRETATQIVSEQTP 268
>gi|341892055|gb|EGT47990.1| hypothetical protein CAEBREN_22178 [Caenorhabditis brenneri]
Length = 354
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++LCEAD L+ DA +R +E+Y K+ CC +S++ +P++S C +I + PS +
Sbjct: 134 VVLCEADSLTRDAQHGLRRTMEKYANNCKIILCCESLSRIIEPLQSRCIIINVPAPSDDK 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV--EGQVILTG 117
+ V+ I E E IQ+P + +KI D S+ NLR+AI + EA + N + Q+
Sbjct: 194 MRAVINKIIEAEKIQIPSNILQKIIDKSEGNLRRAILTIEALKMENESGISASAQIPTAE 253
Query: 118 WEDDITNIATKIIEEQSP 135
WE I A I+ +Q+P
Sbjct: 254 WEIYIQETARMILMKQTP 271
>gi|195434074|ref|XP_002065028.1| GK15241 [Drosophila willistoni]
gi|194161113|gb|EDW76014.1| GK15241 [Drosophila willistoni]
Length = 356
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ EAD+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ E
Sbjct: 132 IVVSEADELTKDAQHALRRTMEKYVATCRIILSVNSTSRIIPAIRSRCLGIRVAAPSETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
I+ +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EAS+ PF Q I W
Sbjct: 192 IINILQSTCKREGLVLPVELAKRVVDKSERNLRRALLMLEASKVAKSPFTANQEIAELDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A +I+ EQ+P +
Sbjct: 252 QVYLRETANQIMSEQTPAK 270
>gi|195384848|ref|XP_002051124.1| GJ14536 [Drosophila virilis]
gi|194147581|gb|EDW63279.1| GJ14536 [Drosophila virilis]
Length = 356
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIILSVNSTSRIIPAIRSRCLGIRVPAPSENE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV-EGQVILTGW 118
+ VL+ ++EG+ LP +LA+++ + S+ N+R+A+ EAS+ YPF + Q+ W
Sbjct: 192 MTAVLQSTCKREGLVLPPELAKRVVEKSERNMRRALLMLEASKVQQYPFTAQQQIAELDW 251
Query: 119 EDDITNIATKIIEEQSP 135
+ + AT+I+ EQ+P
Sbjct: 252 QVYLRETATQIVSEQTP 268
>gi|289741699|gb|ADD19597.1| replication factor C subunit RFC3 [Glossina morsitans morsitans]
Length = 356
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P E
Sbjct: 132 IVLSEVDELTKDAQHALRRTMEKYVATCRIILSVNSTSRIIPAIRSRCLGIRVAAPRPDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I +L+ I+++EG+ LP +LA+++ S+ NLR AI E + YPF V+ +++ W
Sbjct: 192 IATILQHISKKEGVVLPSELAKRVVQKSERNLRLAILMLETCKVQQYPFTVQQEIVGLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A +II EQ+P +
Sbjct: 252 KTYLRETANQIITEQTPAK 270
>gi|340724560|ref|XP_003400649.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 3-like
[Bombus terrestris]
Length = 351
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ +A +R +E+Y ++ C + S++ P I+S C I++ PS +
Sbjct: 128 VLLTNVDQLTKEAQHALRRTMEKYVTTCRLILCANSTSRVLPAIRSRCLGIRVPAPSISD 187
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I ++L I ++EG+ LP +LA ++A+ S NLR+AI EA + YPF Q I W
Sbjct: 188 IKDILHSICKREGLTLPDELATRLAECSGRNLRRAILMLEACKVEQYPFTADQSITEPDW 247
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I N A ++ EQ+PK+
Sbjct: 248 QVYIRNTANMMVSEQNPKK 266
>gi|350424978|ref|XP_003493974.1| PREDICTED: replication factor C subunit 3-like [Bombus impatiens]
Length = 355
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L D+L+ +A +R +E+Y ++ C + S++ P I+S C I++ PS +
Sbjct: 132 VLLTNVDQLTKEAQHALRRTMEKYVTTCRLILCANSTSRVLPAIRSRCLGIRVPAPSISD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I ++L I ++EG+ LP +LA ++A+ S NLR+AI EA + YPF Q I W
Sbjct: 192 IKDILHSICKREGLTLPDELATRLAECSGRNLRRAILMLEACKVEQYPFTADQSITEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I N A ++ EQ+PK+
Sbjct: 252 QVYIRNTANMMVSEQNPKK 270
>gi|170584076|ref|XP_001896847.1| Activator 1 38 kDa subunit (Replication factor C 38 kDa subunit)
[Brugia malayi]
gi|158595810|gb|EDP34309.1| Activator 1 38 kDa subunit (Replication factor C 38 kDa subunit),
putative [Brugia malayi]
Length = 354
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD+L+ DA +R +E+Y ++ CC +SK+ P+KS C +++ PS +
Sbjct: 132 VVLVEADQLTRDAQNALRRTMEKYAQTCRLILCCDSISKIIDPLKSRCLAVRVAAPSDDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
+ + + + +QE + +P + + + N+R+A+ EA++ NYPF E Q I W
Sbjct: 192 VAKAVRHVCKQENVSVPESIIAAVLQKANGNMRRALLMIEAAKVQNYPFKENQEIPDPEW 251
Query: 119 EDDITNIATKIIEEQSPK 136
E + A +I++Q+P+
Sbjct: 252 EIYLRETAKMMIQQQNPE 269
>gi|357625732|gb|EHJ76077.1| putative Replication factor C subunit 3 [Danaus plexippus]
Length = 355
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E D L+ DA +R +E+Y ++ + +S+ + I+S C I++ P++ E
Sbjct: 132 VILNEVDDLTKDAQHALRRTMEKYVSTCRLILIANSISRVITAIRSRCLTIRVPAPTETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
I VL + ++EG+ LP +LA +IA ++ NLR+A+ EA + +YPF Q V W
Sbjct: 192 IASVLHAVCKKEGLSLPSELAMRIAKSADRNLRRALLMCEACKVQHYPFTSDQKVPEPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I + A I+ EQSPK+
Sbjct: 252 QIFIRDTAAMILSEQSPKK 270
>gi|223998512|ref|XP_002288929.1| replication factor C 37 KD subunit [Thalassiosira pseudonana
CCMP1335]
gi|220976037|gb|EED94365.1| replication factor C 37 KD subunit [Thalassiosira pseudonana
CCMP1335]
Length = 359
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ A +R +E+Y ++ CC++ SK + P++S C I++ PS E
Sbjct: 134 VVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSHDE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR-----------QMNYPF 108
I VL+ +A +E I LP +LA +A +S NLR+A+ E+ + N P
Sbjct: 194 IATVLKTVARKESITLPDELAISLARSSNRNLRRALLMLESCHVTTRDDSPKELKPNQPI 253
Query: 109 VEGQVILTGWEDDITNIATKIIEEQSPKQ 137
T WE I+ +A++I EQSPK+
Sbjct: 254 PH-----TDWERYISQLASEITREQSPKR 277
>gi|343113487|gb|AEL87702.1| replication factor C 3 [Strongylocentrotus nudus]
Length = 334
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 29 KVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNS 87
++ CC+ SK+ P I+S C +++ PS EI ++L+ + ++EG+ LP +LA++IA+ S
Sbjct: 139 RLILCCNSTSKVIPAIRSRCLGVRVAAPSIAEITQILQNVCKKEGLNLPSELAKRIAEKS 198
Query: 88 KNNLRQAIRSFEASRQMNYPFVEGQVILTG-WEDDITNIATKIIEEQSPKQ 137
+ NLR+AI S EA + YPF Q I WE + A II++QSP+Q
Sbjct: 199 ERNLRKAILSCEACKVQQYPFSADQDIPEADWEGFLRETANHIIQQQSPRQ 249
>gi|195340081|ref|XP_002036645.1| GM11127 [Drosophila sechellia]
gi|194130525|gb|EDW52568.1| GM11127 [Drosophila sechellia]
Length = 351
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q I W
Sbjct: 192 IVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A++II EQ+P +
Sbjct: 252 QVFLRETASQIISEQTPAK 270
>gi|195472100|ref|XP_002088340.1| GE12972 [Drosophila yakuba]
gi|194174441|gb|EDW88052.1| GE12972 [Drosophila yakuba]
Length = 356
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q I W
Sbjct: 192 IVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A++II EQ+P +
Sbjct: 252 QVFLRETASQIISEQTPAK 270
>gi|341881278|gb|EGT37213.1| CBN-RFC-3 protein [Caenorhabditis brenneri]
Length = 354
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++LCEAD L+ DA +R +E+Y K+ CC +S++ +P++S C +I + PS +
Sbjct: 134 VVLCEADSLTRDAQHGLRRTMEKYANNCKIILCCESLSRIIEPLQSRCIIINVPAPSDDK 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE--GQVILTG 117
+ V+ I E E IQ+P + +KI + S+ NLR+AI + EA + N + Q+
Sbjct: 194 MRAVINKIIEAEKIQIPSNILQKIIEKSEGNLRRAILTIEALKMENESGISANAQIPTAE 253
Query: 118 WEDDITNIATKIIEEQSP 135
WE I A I+ +Q+P
Sbjct: 254 WEIYIQETARMILMKQTP 271
>gi|195118724|ref|XP_002003886.1| GI18150 [Drosophila mojavensis]
gi|193914461|gb|EDW13328.1| GI18150 [Drosophila mojavensis]
Length = 356
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIILSVNSTSRIIPAIRSRCLGIRVPAPSEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV-EGQVILTGW 118
++ VL+ ++EG+ LP +LA+++ + S+ N+R+A+ EAS+ YPF + Q+ W
Sbjct: 192 MIAVLQNTCKREGLVLPPELAKRVVEKSERNMRRALLMLEASKVQQYPFTAQQQIAELDW 251
Query: 119 EDDITNIATKIIEEQSP 135
+ + A +I+ EQ+P
Sbjct: 252 QVYLRETAAQIVSEQTP 268
>gi|19921136|ref|NP_609494.1| replication factor C 38kD subunit [Drosophila melanogaster]
gi|22946236|gb|AAF53076.2| replication factor C 38kD subunit [Drosophila melanogaster]
gi|220942726|gb|ACL83906.1| RfC38-PA [synthetic construct]
gi|220952880|gb|ACL88983.1| RfC38-PA [synthetic construct]
Length = 356
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q I W
Sbjct: 192 IVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A++II EQ+P +
Sbjct: 252 QVFLRETASQIISEQTPAK 270
>gi|194761254|ref|XP_001962844.1| GF14225 [Drosophila ananassae]
gi|190616541|gb|EDV32065.1| GF14225 [Drosophila ananassae]
Length = 356
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVSAPSEPE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ + S+ NLR+A+ EA++ PF Q I W
Sbjct: 192 IVSILQNTCKREGLTLPPELAKRLVEKSERNLRRALLMLEAAKVAKVPFTANQEIPDLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + + A++II EQ+P +
Sbjct: 252 QAFLRDTASQIISEQTPAK 270
>gi|28317156|gb|AAD46852.2|AF160912_1 LD06837p, partial [Drosophila melanogaster]
Length = 395
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 171 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 230
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q I W
Sbjct: 231 IVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDW 290
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A++II EQ+P +
Sbjct: 291 QVFLRETASQIISEQTPAK 309
>gi|402593824|gb|EJW87751.1| hypothetical protein WUBG_01340 [Wuchereria bancrofti]
Length = 354
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEI 60
+L EAD+L+ DA +R +E+Y ++ CC +SK+ P+KS C +++ PS ++
Sbjct: 133 VLMEADQLTRDAQNALRRTMEKYAQTCRLILCCDSISKIIDPLKSRCLAVRVAAPSDDDV 192
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-WE 119
+ + + +QE + +P + + + N+R+A+ EA+ NYPF E Q I WE
Sbjct: 193 AKAVRHVCKQENVSVPESIIAAVVQKANGNMRRALLMIEAATVQNYPFKENQEIPDPEWE 252
Query: 120 DDITNIATKIIEEQSPK 136
+ A ++++QSP+
Sbjct: 253 VYLRETAKMMMQQQSPE 269
>gi|409078462|gb|EKM78825.1| hypothetical protein AGABI1DRAFT_114403 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 355
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ E
Sbjct: 131 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLVRVAAPNADE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL +A +E QLP + A +I ++S N+R+A+ EA + M P + G + +
Sbjct: 191 MAAVLNSVAGRENFQLPEEAARQIVEDSNGNMRKALLVMEALK-MQSPNLTGPLTIAKPD 249
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+ EQSP +
Sbjct: 250 WETYCHKVADLIVSEQSPSR 269
>gi|226469846|emb|CAX70204.1| Replication factor C 38kD subunit [Schistosoma japonicum]
Length = 302
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD L+ DA +R +E+Y ++ SK+ +S C I++ PS E
Sbjct: 132 VVLHEADHLTRDAQHALRRTMEKYISTCRLILSAESTSKIISATRSRCLPIRVSAPSTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVE+L+ A +EG +P +LA++IA S+ NLR+A+ E +R + P + Q + L W
Sbjct: 192 IVEILKNTARREGHTMPTELAKRIAIASERNLRRALLFAEVARWQHSPMLPDQSVQLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ ++ A+ I+ EQSPK+
Sbjct: 252 QAFLSETASAILAEQSPKK 270
>gi|194861801|ref|XP_001969859.1| GG10322 [Drosophila erecta]
gi|190661726|gb|EDV58918.1| GG10322 [Drosophila erecta]
Length = 356
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
IV +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q I W
Sbjct: 192 IVSILQNTCKREGLALPVELAKRLVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDW 251
Query: 119 EDDITNIATKIIEEQSP 135
+ + A++II EQ+P
Sbjct: 252 QVFLRETASQIISEQTP 268
>gi|426199470|gb|EKV49395.1| hypothetical protein AGABI2DRAFT_191437 [Agaricus bisporus var.
bisporus H97]
Length = 355
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ E
Sbjct: 131 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLVRVAAPNADE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL IA +E QLP + A +I ++S N+R+A+ EA + M P + G + +
Sbjct: 191 MAAVLNSIAGRENFQLPEEAARQIIEDSNGNMRKALLVMEALK-MQSPNLTGPLTIAKPD 249
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+ EQSP +
Sbjct: 250 WETYCHKVADLIVSEQSPSR 269
>gi|226469848|emb|CAX70205.1| Replication factor C 38kD subunit [Schistosoma japonicum]
Length = 357
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD L+ DA +R +E+Y ++ SK+ +S C I++ PS E
Sbjct: 132 VVLHEADHLTRDAQHALRRTMEKYISTCRLILSAESTSKIISATRSRCLPIRVSAPSTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVE+L+ A +EG +P +LA++IA S+ NLR+A+ E +R + P + Q + L W
Sbjct: 192 IVEILKNTARREGHTMPTELAKRIAIASERNLRRALLYAEVARWQHSPMLPDQSVQLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ ++ A+ I+ EQSPK+
Sbjct: 252 QAFLSETASAILAEQSPKK 270
>gi|336371191|gb|EGN99530.1| hypothetical protein SERLA73DRAFT_179588 [Serpula lacrymans var.
lacrymans S7.3]
Length = 368
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ +E
Sbjct: 132 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLMRVAAPTPEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL +A++ LP +++I D+S NLR+A+ FEA + M P + G + +
Sbjct: 192 MQTVLHHVAKKLKFDLPDDASKQIVDDSGGNLRKALLVFEALK-MQSPDLSGSLAIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQSP +
Sbjct: 251 WETYCHKVADLIVQEQSPAR 270
>gi|196006351|ref|XP_002113042.1| hypothetical protein TRIADDRAFT_26016 [Trichoplax adhaerens]
gi|190585083|gb|EDV25152.1| hypothetical protein TRIADDRAFT_26016 [Trichoplax adhaerens]
Length = 355
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ CC+ S++ P ++S C I++ P+ E
Sbjct: 132 IVVMELDRLTKDAQHALRRTMEKYISTCRLILCCNSTSRVIPAVRSRCLGIRVAAPTADE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
+L + ++EG+ L +LA +IA+ SK NLR+A+ EA + YPF Q + W
Sbjct: 192 --ALLHGVCKKEGLTLNQELAVRIAEQSKRNLRRALLMCEACKVQQYPFTPDQPVSEAEW 249
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+E+Q+PK+
Sbjct: 250 EIYLRETAAAIVEQQNPKR 268
>gi|336383955|gb|EGO25103.1| hypothetical protein SERLADRAFT_368530 [Serpula lacrymans var.
lacrymans S7.9]
Length = 356
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ +E
Sbjct: 132 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLMRVAAPTPEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL +A++ LP +++I D+S NLR+A+ FEA + M P + G + +
Sbjct: 192 MQTVLHHVAKKLKFDLPDDASKQIVDDSGGNLRKALLVFEALK-MQSPDLSGSLAIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQSP +
Sbjct: 251 WETYCHKVADLIVQEQSPAR 270
>gi|389750127|gb|EIM91298.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 358
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PI+S C ++++ P+ +E
Sbjct: 132 VVINEADTLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIRSRCLLMRVAAPNHEE 191
Query: 60 IVEVLEFIAEQEGI-QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-- 116
+ VL +A + GI ++P + A++I +S N+R+AI EA + M P +EG + +
Sbjct: 192 MRTVLNHVATRAGIPKIPQEAADEIVRDSNGNMRKAILVLEALK-MQTPSLEGPLAIAKP 250
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
WE +A II EQSP++
Sbjct: 251 DWETYCHKVADMIISEQSPQR 271
>gi|242011379|ref|XP_002426428.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212510533|gb|EEB13690.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 355
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 7 DKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEIVEVLE 65
D+L+ DA +R +E Y ++ C + +S + P IKS C I++ PS ++I ++L
Sbjct: 138 DELTADAQHALRKTMENYNVTCRLILCGNSISNIIPAIKSRCLHIRIPAPSYEDICKILL 197
Query: 66 FIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGWEDDITN 124
FI ++EGIQLP LA IA S NLR+AI EA R +P E Q V+ W+ +
Sbjct: 198 FICKKEGIQLPETLAYNIARKSDRNLRRAILMCEACRVQQFPLTENQEVVDLDWQIFLKE 257
Query: 125 IATKIIEEQSP 135
A I+ +Q+P
Sbjct: 258 TARLIVAKQTP 268
>gi|302675274|ref|XP_003027321.1| hypothetical protein SCHCODRAFT_61292 [Schizophyllum commune H4-8]
gi|300101007|gb|EFI92418.1| hypothetical protein SCHCODRAFT_61292 [Schizophyllum commune H4-8]
Length = 356
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ E
Sbjct: 132 VVINEADGLSRDAQAALRRTMEKYMSNLRIILCANSTSRLIAPIKSRCLLMRVAAPNAGE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
++ VL+++A + G LP + ++I +S NLR+AI EA + M P + G + +
Sbjct: 192 MMSVLDYVARRVGFDLPPEAGQQIVADSGGNLRKAILVLEALK-MQSPDLTGPLAIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+ EQSP +
Sbjct: 251 WETYCHKVADLIVAEQSPAR 270
>gi|226469850|emb|CAX70206.1| Replication factor C 38kD subunit [Schistosoma japonicum]
Length = 357
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD L+ DA +R +E+Y ++ SK+ +S C I++ PS E
Sbjct: 132 VVLHEADHLTRDAQHALRRTMEKYISTCRLILSAESTSKIISATRSRCLPIRVSAPSTDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVE+L+ A +EG +P +LA++IA S+ NLR+A+ E +R + P + Q + L W
Sbjct: 192 IVEILKNTARREGHTMPTELAKRIAIASERNLRRALLYAEVARWQHSPMLPDQSVQLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A+ I+ EQSPK+
Sbjct: 252 QAFLCETASAILAEQSPKK 270
>gi|395332196|gb|EJF64575.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 360
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C + SKL PI+S C ++++ PS++E
Sbjct: 132 VVIHEADSLTRDAQAALRRTMEKYMTNMRLILCANSTSKLIAPIRSRCLLMRVAAPSEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL+++ ++EG +P A IA ++ N+R+A+ EA + N + +
Sbjct: 192 MRAVLDYVGKREGFAIPDDTARLIAQDANGNVRKALLVLEALKMQNTDLSSSALSIAKPD 251
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A II+EQSP +
Sbjct: 252 WETYCHKVADMIIQEQSPAR 271
>gi|91089203|ref|XP_966829.1| PREDICTED: similar to replication factor C subunit 3 [Tribolium
castaneum]
gi|270012468|gb|EFA08916.1| hypothetical protein TcasGA2_TC006622 [Tribolium castaneum]
Length = 354
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L + D L+ DA +R +E+Y ++ C + +S++ P I+S C I++ PS +
Sbjct: 131 ILLTDVDNLTKDAQHALRRTMEKYIANCRIILCTTSISRVIPAIRSRCLCIRVPAPSIDD 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I +L +A +E + LP +LA++IA+ S NLR+A+ EA + V Q + W
Sbjct: 191 ITSILTNVAAKESVSLPPELAKRIAEKSDRNLRRALLMCEACKVQKQGLVASQSVSEPDW 250
Query: 119 EDDITNIATKIIEEQS 134
+ I NIA+KI++EQS
Sbjct: 251 QIFIRNIASKIVKEQS 266
>gi|392564235|gb|EIW57413.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 358
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C + SKL PI+S C ++++ PS +E
Sbjct: 132 VVIHEADALTRDAQAALRRTMEKYMSNMRLILCANSTSKLIAPIRSRCLLMRVAAPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL+F+A+ EG +P IA ++ NLR+AI EA + N + +
Sbjct: 192 MQTVLDFVAKHEGFAIPEDTVSLIAADAGGNLRKAILVLEALKMQNPDLSVSALSIAKPD 251
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQSP +
Sbjct: 252 WETYCHKVADMIVQEQSPAR 271
>gi|339256702|ref|XP_003370227.1| replication factor C subunit 3 [Trichinella spiralis]
gi|316965626|gb|EFV50315.1| replication factor C subunit 3 [Trichinella spiralis]
Length = 355
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L E DKL+ +A +R +E+Y ++ CC SK +QPI+S C I++ P+ +E
Sbjct: 132 IVLTEVDKLTREAQHALRRTMEKYSSSCRIILCCQSTSKVIQPIQSRCLPIRVPAPTDEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA--SRQMNYPFVEGQVILTG 117
I E+L+ + + E +L +L ++I + NLR+A+ S E+ S + NY E VI
Sbjct: 192 ITEILQRVLKLENCRLSAELIQEIVQKADGNLRRALLSAESVISNERNY-LSENPVIEPD 250
Query: 118 WEDDITNIATKIIEEQSPK 136
WE + A+ I+ EQ+PK
Sbjct: 251 WEICMKETASMILREQTPK 269
>gi|125986059|ref|XP_001356793.1| GA19473 [Drosophila pseudoobscura pseudoobscura]
gi|195148330|ref|XP_002015127.1| GL18586 [Drosophila persimilis]
gi|54645119|gb|EAL33859.1| GA19473 [Drosophila pseudoobscura pseudoobscura]
gi|194107080|gb|EDW29123.1| GL18586 [Drosophila persimilis]
Length = 356
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ PS+ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIMSVNSTSRIIPAIRSRCLGIRVAAPSEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ-VILTGW 118
+ +L+ ++EG+ LP +LA+++ D S+ NLR+A+ EA++ PF Q V W
Sbjct: 192 MTAILQSTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKSPFTAQQEVPDLDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A++II EQ+P +
Sbjct: 252 QVFLRETASQIISEQTPAK 270
>gi|312381002|gb|EFR26856.1| hypothetical protein AND_06782 [Anopheles darlingi]
Length = 378
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 22/159 (13%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E D+L+ DA +R +E+Y ++ C + S++ P +KS C I++ P+++E
Sbjct: 132 IVLSEVDELTKDAQHALRRTMEKYVATCRLVLCVNSTSRIIPAVKSRCLGIRVSSPTEEE 191
Query: 60 IVEVL--------------------EFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
I+ ++ + I ++EG+ +P +LA++IA S+ NLR+AI S E
Sbjct: 192 IIGIMNVSKGVSSIHCSFADECLSPQTICKKEGLHIPPELAQRIAKKSERNLRRAILSLE 251
Query: 100 ASRQMNYPFVEGQ-VILTGWEDDITNIATKIIEEQSPKQ 137
A + YPF Q V W+ + A I++EQ+P++
Sbjct: 252 ACKVQQYPFTANQDVPDMDWQVYLRETANMIVQEQTPQR 290
>gi|397643532|gb|EJK75924.1| hypothetical protein THAOC_02338 [Thalassiosira oceanica]
Length = 376
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DKL+ A +R +E+Y ++ CC++ SK + P++S C I++ PS E
Sbjct: 151 VVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSDDE 210
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSF---------EASRQMNYPFVE 110
I VL+ ++ +E I+L +LA IA S NLR+A+ E+ R++ +
Sbjct: 211 IASVLKTVSRKENIKLADELAINIARLSSRNLRRALLMLESCYVTTRDESPRELK---AD 267
Query: 111 GQVILTGWEDDITNIATKIIEEQSPK 136
V T WE I +AT I++EQSPK
Sbjct: 268 TPVPRTDWERYIAMLATGIVKEQSPK 293
>gi|430814355|emb|CCJ28396.1| unnamed protein product [Pneumocystis jirovecii]
Length = 351
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ E+D LS +A +R +E+Y ++ S SK + PI+S C ++++ P +E
Sbjct: 132 VIINESDHLSGEAQAALRRTMEKYYPNLRLILLASSTSKIMAPIQSRCFLVRVSAPKLEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +L+++A +E LP QL KIA +SK NLR+A+ E + E ++ L W
Sbjct: 192 IATILKYVASEEHFSLPDQLCNKIALDSKRNLRRALLMLETIYAKDSNLHENTIVPLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA II+EQ+P +
Sbjct: 252 ETYINQIAESIIQEQTPAK 270
>gi|393221474|gb|EJD06959.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 355
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C + SKL PI+S C ++++ P+++E
Sbjct: 132 VIINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSKLIAPIRSRCLLMRVAAPTEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ L ++A++E LP A +IA+++ NLR+A+ EA + M P + G + +
Sbjct: 192 VQTCLRYVAKREKFDLPPDAACEIAEDAGGNLRKAVLVLEALK-MQSPDLSGPLTIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQ+P +
Sbjct: 251 WETYCHKVADLIVQEQTPAR 270
>gi|307188807|gb|EFN73390.1| Replication factor C subunit 3 [Camponotus floridanus]
Length = 354
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L D+L+ DA +R +E+Y ++ C + S++ P I+S C I++ P+ E
Sbjct: 131 ILLSNVDQLTRDAQHALRRTMEKYISTCRLILCANSTSRVLPAIRSRCVRIRVPAPTGSE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I +L I ++EG+ LP + A ++ + S NLR+AI EA + PF Q I +
Sbjct: 191 IKNILHSICKREGLHLPDEFANRVIEASGRNLRRAILMLEACKVEQCPFTADQKITEPDY 250
Query: 119 EDDITNIATKIIEEQSPK 136
+ I N A ++ EQSPK
Sbjct: 251 QVYIRNTANMMVSEQSPK 268
>gi|58263060|ref|XP_568940.1| DNA clamp loader [Cryptococcus neoformans var. neoformans JEC21]
gi|134107896|ref|XP_777330.1| hypothetical protein CNBB1320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260020|gb|EAL22683.1| hypothetical protein CNBB1320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223590|gb|AAW41633.1| DNA clamp loader, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 356
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y ++ C + SK+ PI+S C ++++ P+ E
Sbjct: 132 VIINEADALTRDAQAALRRTMEKYMTNMRLILCANSTSKIIAPIRSRCLLMRVAAPTDDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL ++A++E LP I + S+ NLR+A+ FEA R M +P + G V +
Sbjct: 192 MSTVLNYVAKKERFMLPSSANNAILETSQGNLRKALLVFEAMR-MQHPDLSGDVEVAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQ+ ++
Sbjct: 251 WETYCGKVADAILQEQTAQK 270
>gi|145346328|ref|XP_001417641.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577869|gb|ABO95934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 355
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS +A +R +E+Y ++F S+ + ++S C +++ P +E
Sbjct: 135 LVLTEVDRLSREAQYGLRRTMEKYSASCRLFLIAERPSRVMDALQSRCLPVRVPGPRVEE 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +L +A++E ++LP +LA ++A S N+R+A+ + E R +YPF Q + T W
Sbjct: 195 IENLLHDVAKKEKLELPPELATRVATASGRNMRRALLALETCRVNSYPFKPTQAVQTTDW 254
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I I +I+ EQSP +
Sbjct: 255 ELYINQIGAEILAEQSPAR 273
>gi|17541990|ref|NP_502517.1| Protein RFC-3 [Caenorhabditis elegans]
gi|3874848|emb|CAA94339.1| Protein RFC-3 [Caenorhabditis elegans]
Length = 354
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++LCEAD L+ DA +R +E+Y K+ C +S++ +P++S C +I + P+ ++
Sbjct: 134 VVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCIIINVPAPTDED 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL--TG 117
+ +VL + E+E LP + +KI + S+ NLR+AI EA R N V V++
Sbjct: 194 VTKVLRKVIERESFLLPENVLQKIVEKSEGNLRRAILMTEALRMENESGVAESVVIPVPE 253
Query: 118 WEDDITNIATKIIEEQS 134
WE I A I+++QS
Sbjct: 254 WEIYIQETARLILQKQS 270
>gi|392593574|gb|EIW82899.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 360
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ P+ +E
Sbjct: 132 VVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLMRVAAPTTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VLE +A++ +P + + +IA+ S N+R+A+ FEA + M P + G + +
Sbjct: 192 MQVVLEHVAKKLKFDMPPEASSQIAEESGGNMRKALLVFEALK-MQSPDLSGPLSIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I+++QSP Q
Sbjct: 251 WETYCRKVAQLILKDQSPSQ 270
>gi|353234656|emb|CCA66679.1| probable RFC5-DNA replication factor C, 40 KD subunit
[Piriformospora indica DSM 11827]
Length = 325
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C + SKL PIKS C ++++ P+ E
Sbjct: 95 VVINEADSLTRDAQAALRRTMEKYMANMRIILCSTSTSKLIAPIKSRCLLVRVGAPTDDE 154
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
+ VL+++A++E L ++A IA ++ N R+A+ EA + M +P + +
Sbjct: 155 MTSVLQYVAKKERFTLSDEVASNIARDADGNTRKAVLMLEAMK-MQHPNLSETTMSIQPA 213
Query: 117 --GWEDDITNIATKIIEEQSPKQ 137
WE ++A I++EQ+PK+
Sbjct: 214 KPDWETYCHHVADMIVQEQTPKR 236
>gi|256080226|ref|XP_002576383.1| replication factor C / DNA polymerase III gamma-tau subunit
[Schistosoma mansoni]
gi|353231808|emb|CCD79163.1| putative replication factor C / DNA polymerase III gamma-tau
subunit [Schistosoma mansoni]
Length = 357
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD L+ DA +R +E+Y ++ SK+ +S C I++ PS E
Sbjct: 132 VVLHEADHLTRDAQHALRRTMEKYISTCRLILSAESTSKIISATRSRCLPIRVSAPSIDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVE+L A +EG +P +LA++IA S+ NLR+A+ E ++ + P + Q + L W
Sbjct: 192 IVEILRNTARREGHSMPVELAKRIALASERNLRRALLYAEVAKWQHCPMLPDQSVQLPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ +T A+ I+ EQSPK+
Sbjct: 252 QVFLTETASAILAEQSPKK 270
>gi|392576874|gb|EIW70004.1| hypothetical protein TREMEDRAFT_30209 [Tremella mesenterica DSM
1558]
Length = 341
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y ++ C + SK+ PI+S C ++++ P E
Sbjct: 132 VIVNEADALTRDAQAALRRTMEKYMTNMRLILCATSTSKIIAPIRSRCLLVRVAAPDNGE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG--QVILTG 117
+ +VL+ +A++E LP + I S NLR+A+ FEA R M P ++G +V
Sbjct: 192 MTKVLQHVAKKERFHLPDPACQSITSASGGNLRKALLVFEAMR-MQRPDLQGDIEVAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQ+ ++
Sbjct: 251 WETYCAKVADSILQEQTAQR 270
>gi|308491749|ref|XP_003108065.1| CRE-RFC-3 protein [Caenorhabditis remanei]
gi|308248913|gb|EFO92865.1| CRE-RFC-3 protein [Caenorhabditis remanei]
Length = 370
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++LCEAD L+ DA +R +E+Y K+ CC +S++ +P++S C +I + P+ +E
Sbjct: 134 VVLCEADSLTRDAQHGLRRTMEKYANNCKIILCCESLSRIIEPLQSRCIIINVPAPTDEE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE--GQVILTG 117
+ VL + ++E +++P + +KI + S+ NLR+AI EA + N + Q+ +
Sbjct: 194 MTSVLMKVIQKEKLEMPQNILQKIVEKSEGNLRRAILMTEAIKMENENGISTNAQIPVPE 253
Query: 118 WEDDITNIATKIIEEQS 134
WE + A I+++Q+
Sbjct: 254 WEIYLQETARLILQKQT 270
>gi|358336212|dbj|GAA33502.2| replication factor C subunit 3/5, partial [Clonorchis sinensis]
Length = 367
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD L+ DA +R +E+Y ++ +SK+ +S C I++ PS +
Sbjct: 142 VVLHEADHLTKDAQHALRRTMEKYISTCRLILSAESISKIISATRSRCLPIRVAAPSIDQ 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
IV +L+ A +EG +P +LAE+IA+ S+ NLR+A+ E ++ + P E V L W
Sbjct: 202 IVHILKNTARREGQSMPTELAERIANASERNLRRALLLAEVAKWQHSPMSAEQPVQLPDW 261
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ + A+ I+ EQSP++
Sbjct: 262 QVFLAETASAILAEQSPRK 280
>gi|321248728|ref|XP_003191220.1| subunit of DNA Replication factor C (RF-C); Rfc5p [Cryptococcus
gattii WM276]
gi|317457687|gb|ADV19433.1| Subunit of DNA Replication factor C (RF-C), putative; Rfc5p
[Cryptococcus gattii WM276]
Length = 356
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y ++ C + SK+ PI+S C ++++ P+ E
Sbjct: 132 VIINEADALTRDAQAALRRTMEKYMANMRLILCANSTSKIIAPIRSRCLLMRVAAPTDDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG--QVILTG 117
+ VL ++A++E LP I + S+ NLR+A+ FEA R M P + G +V
Sbjct: 192 MTTVLNYVAKKERFTLPSPANNAILETSQGNLRKALLVFEAMR-MQRPDLSGDIEVAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++EQ+ ++
Sbjct: 251 WETYCGKVADAILQEQTAQR 270
>gi|268552547|ref|XP_002634256.1| C. briggsae CBR-RFC-3 protein [Caenorhabditis briggsae]
Length = 354
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++LCEAD L+ DA +R +E+Y K+ CC +S++ +P++S C +I + P+ E
Sbjct: 134 VVLCEADSLTRDAQHGLRRTMEKYANNCKIVLCCESLSRIIEPLQSRCIIINVPAPTDVE 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV--EGQVILTG 117
+ +VL + ++E + +P + +KI + S+ NLR+AI EA + N + Q+ +
Sbjct: 194 VEKVLRKVIQKENLNMPDSVLQKIVEKSEGNLRRAILMTEAIKMENEGGIPANAQIPVPE 253
Query: 118 WEDDITNIATKIIEEQS 134
WE I A I+++Q+
Sbjct: 254 WEVYIQETARLILQKQT 270
>gi|393239720|gb|EJD47250.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 357
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S L PIKS C ++++ P+ +E
Sbjct: 132 VVINEADSLSRDAQAALRRTMEKYMSNMRLVLCTNSTSNLIAPIKSRCLLVRVAAPNAEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VLE +A++E LP +E+I ++ NLR+A+ EA + M P + G + +
Sbjct: 192 MQAVLEHVAKKEKFDLPPTASEQIVADANGNLRKALLVLEALK-MQSPDLTGDLAIAKPD 250
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE +A I++ Q+P+Q
Sbjct: 251 WEAYCHAVADLIVQRQTPEQ 270
>gi|71004802|ref|XP_757067.1| hypothetical protein UM00920.1 [Ustilago maydis 521]
gi|46096871|gb|EAK82104.1| hypothetical protein UM00920.1 [Ustilago maydis 521]
Length = 353
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y G ++ C + SK+ PI+S C ++++ P+ +E
Sbjct: 131 VVINEADSLSRDAQSALRRTMEKYMGNLRLVLCATSTSKIIGPIRSRCLLLRVGAPTDEE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
I VL +A++E +P + +I D+ NLR+A+ EA R M P + G + +
Sbjct: 191 IKTVLNHVAKKERFNIPDAVQTQICDDCNGNLRKAMLVLEALR-MQSPDLSGGIGIAKPD 249
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE IT A I+ + SP+
Sbjct: 250 WEIYITKTADLILSDPSPQN 269
>gi|449540333|gb|EMD31326.1| hypothetical protein CERSUDRAFT_119887 [Ceriporiopsis subvermispora
B]
Length = 357
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y ++ C + S+L PI+S C ++++ PS E
Sbjct: 132 VIINEADSLTRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIRSRCLLMRVAAPSPAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
+ VL +A +E LP + A+ I +S N+R+A+ FEA + + I W
Sbjct: 192 METVLHHVAAKERFHLPDEAAQAIVADSNGNMRKAVLVFEALKMQSTDLTGSLAIAKPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E +A I+ EQ+P +
Sbjct: 252 ETYCAKVAELILSEQTPAR 270
>gi|388851451|emb|CCF54853.1| probable RFC5-DNA replication factor C, 40 KD subunit [Ustilago
hordei]
Length = 353
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y G ++ C + SK+ PI+S C ++++ PS +E
Sbjct: 131 VVINEADSLSRDAQSALRRTMEKYMGNLRLVLCATSTSKIIGPIRSRCLLLRVGAPSDEE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
I VL +A++E +P + +I D+ NLR+AI EA R + G I W
Sbjct: 191 IKTVLSHVAKKERFSIPDTVQNQICDDCSGNLRKAILVLEALRMQSPDLSAGIAIAKPDW 250
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ A I+ + SP+
Sbjct: 251 EIYISKTADLILSDPSPQN 269
>gi|452821368|gb|EME28399.1| replication factor C subunit 3/5 [Galdieria sulphuraria]
Length = 401
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L + D++S A +R +E+Y ++ V++ ++PI+S C I++ P K+E
Sbjct: 161 VVLHDIDEVSKQAQQALRRTMEKYTSCCRIIMSAESVTRVMEPIRSRCLGIRIPCPKKEE 220
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF----------- 108
I +VL+ IA++EG+ LP A ++ SK NLR+AI + R + YPF
Sbjct: 221 IEQVLQKIAKKEGLVLPDCYANQLVTQSKGNLRKAILLLQVGRAIAYPFSQQQQKKNEEE 280
Query: 109 ----VEGQVILTGWEDDITNIATKIIEEQSPKQ 137
+ Q WE +IA +I EQ+PKQ
Sbjct: 281 EESWISSQETGWDWERLCYDIANIVIREQNPKQ 313
>gi|402224926|gb|EJU04988.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 359
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD+LS DA +R +E+Y ++ ++ SKL PIKS C ++++ P+ +E
Sbjct: 132 VVINEADQLSRDAQAALRRTMEKYMANLRIILVANNTSKLIAPIKSRCLLVRVAAPTLEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG---QVILT 116
+ VL ++A++E + LP ++A KI + NLR+A+ EA + M +P + ++
Sbjct: 192 METVLGYVAKKERVDLPPEVASKIGAEAVGNLRRALLVLEALK-MQHPDLNAEKLEIAKP 250
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
WE +A I+E+QS ++
Sbjct: 251 DWETYCAKVADLIVEQQSAQR 271
>gi|452847021|gb|EME48953.1| hypothetical protein DOTSEDRAFT_142483 [Dothistroma septosporum
NZE10]
Length = 356
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ PS++E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRCLLVRVAAPSEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I EVL + + E Q L +K+A +SK NLR+A+ FEA N E I W
Sbjct: 192 ICEVLAKVGKDERYQSCEPLEKKVAKDSKRNLRRALLMFEAVHAQNENVSEKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +II E+SP +
Sbjct: 252 EALIDEIAKEIIAERSPAR 270
>gi|343426782|emb|CBQ70310.1| probable RFC5-DNA replication factor C, 40 KD subunit [Sporisorium
reilianum SRZ2]
Length = 353
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y G ++ C + SK+ PI+S C ++++ P+ E
Sbjct: 131 VVINEADSLSRDAQSALRRTMEKYMGNLRLVLCATSTSKIIGPIRSRCLLLRVGAPTDDE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
I VL +A++E +P + +I D+ NLR+A+ EA R M P + G + +
Sbjct: 191 IKTVLTLVAKKERFSIPDTIQTQICDDCNGNLRKAMLVLEALR-MQSPDLSGGIGIAKPD 249
Query: 118 WEDDITNIATKIIEEQSP 135
WE I A I+ + SP
Sbjct: 250 WEIYIAKTADLILSDPSP 267
>gi|110289634|gb|AAP55134.2| hypothetical protein LOC_Os10g42400 [Oryza sativa Japonica Group]
Length = 522
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 40 LQPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
++ ++ LC V+ L PPS EI++VLE+IA QE I LP +A +I +S NNLRQAIRSFE
Sbjct: 386 VEAVRHLCKVVTLKPPSSDEIIKVLEYIAVQESIDLPRDIARRITMSSGNNLRQAIRSFE 445
Query: 100 ASRQMNYPFVEGQV 113
A+ + + G++
Sbjct: 446 ATWKAKLYVIRGKI 459
>gi|413932846|gb|AFW67397.1| hypothetical protein ZEAMMB73_776055 [Zea mays]
Length = 182
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DKLS +A +R +E+Y ++ CC+ SK+ + ++S C +++ PS+ +
Sbjct: 77 LVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQ 136
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
IV+VLEFI ++E + LP A +IA S NLR+AI FE
Sbjct: 137 IVQVLEFIGKKENLILPAGFAARIAAQSNRNLRRAILFFE 176
>gi|403356875|gb|EJY78044.1| Replication factor C subunit 3 [Oxytricha trifallax]
gi|403375729|gb|EJY87839.1| Replication factor C subunit 3 [Oxytricha trifallax]
Length = 371
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ E D L+ +A +R +E Y ++ C +SK +QP++S C +++ P+ QE
Sbjct: 140 VVIHELDNLTREAQAALRRTMETYMPYCRIIANCESLSKVIQPLRSRCLQVRVPAPNAQE 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-- 117
IV VL+ IA E LP QLA I + S+ NLR+AI + ++ N + + + G
Sbjct: 200 IVGVLDQIARNENFDLPKQLAFSICNYSRRNLRRAIMMLQTAKLKNEKLSD-KTYVPGPE 258
Query: 118 WEDDITNIATKIIEEQSPKQ 137
+E +IA ++ EQSPKQ
Sbjct: 259 YETYTRDIAKMVVMEQSPKQ 278
>gi|342879794|gb|EGU81029.1| hypothetical protein FOXB_08438 [Fusarium oxysporum Fo5176]
Length = 389
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL A++EG + L ++IA+ S NLR+A+ +EA N + VI W
Sbjct: 192 ICDVLAVSAKKEGWPVVEGLHKRIAEESGRNLRRALLMYEAVHAQNEKVTDSTVIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE SP +
Sbjct: 252 EALIGQIAKEILEEHSPAR 270
>gi|336260375|ref|XP_003344983.1| hypothetical protein SMAC_06760 [Sordaria macrospora k-hell]
gi|380095056|emb|CCC07558.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 352
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ P+ QE
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRCLLVRVAAPTHQE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLASSAKKEGWPVVQGLHQRIAEESGRNLRRALLMYEAVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|219112623|ref|XP_002178063.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410948|gb|EEC50877.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 361
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E D+LS A +R +E+Y ++ C++ SK ++P++S C I++ P++ E
Sbjct: 140 VVLVEVDRLSRQAQAALRRTMEKYASTCRLILVCNNQSKVIEPVRSRCLGIRVAAPTEDE 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR-QMNYPFVEGQ-VILTG 117
I +VL+ ++ E LP +LA IA S N+R+AI EA Q + Q V T
Sbjct: 200 ICKVLKSVSINESFMLPDELAINIARESSRNVRRAILMLEACYVQKRGALTKDQPVQKTD 259
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE I +A +I EQ+P++
Sbjct: 260 WELYINQLAVEITREQTPQR 279
>gi|388582655|gb|EIM22959.1| DNA clamp loader [Wallemia sebi CBS 633.66]
Length = 356
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD+LS DA +R +E+Y ++ C SK+ PI+S C ++++ P ++
Sbjct: 135 VIINEADQLSRDAQAALRRTMEKYMANLRIILCAQTTSKIISPIRSRCLLMRIPAPQPEQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
+ VL +A++E Q+P +A++I + NLR+A+ EA R + F ++ Q+ W
Sbjct: 195 MTIVLNHVAKKERFQIPDDVAQQIGKEATGNLRKALLVLEAMRMQSPNFDMDIQIAKPDW 254
Query: 119 EDDITNIATKIIEEQSPK 136
+ ++A I + SP+
Sbjct: 255 QSYTISVAKDITSDPSPE 272
>gi|449299018|gb|EMC95032.1| hypothetical protein BAUCODRAFT_523426 [Baudoinia compniacensis
UAMH 10762]
Length = 356
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ P+++E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRCLLVRVAAPTEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL + ++EG + L +IA +S NLR+A+ FEA N E I W
Sbjct: 192 IAGVLARVGKKEGYKSCEPLERRIAKDSGRNLRRALLMFEAVHAQNDNVTEKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA ++IEE+SP +
Sbjct: 252 EALIEVIAKEMIEERSPAR 270
>gi|403417566|emb|CCM04266.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C + S+L PIKS C ++++ PS++E
Sbjct: 132 VIINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLLVRVASPSEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ EVL ++A +E LP A +I ++ N+R+A+ EA
Sbjct: 192 MSEVLRYVAGREQFDLPDDAAREIVQDANGNMRKALLVLEA 232
>gi|398399060|ref|XP_003852987.1| replication factor C subunit 5 [Zymoseptoria tritici IPO323]
gi|339472869|gb|EGP87963.1| hypothetical protein MYCGRDRAFT_85700 [Zymoseptoria tritici IPO323]
Length = 357
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ PS++E
Sbjct: 132 VLINEADHLTRDAQAALRRTMEKYSPNLRLILVANSTSNIIAPIRSRCLLVRVSAPSEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL + + E Q L ++IA +SK NLR+A+ FEA N + I W
Sbjct: 192 ICKVLAKVGKDERYQACETLEKRIARDSKRNLRRALLMFEAVHAQNETVNDKTSIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +IIEE+SP +
Sbjct: 252 EALIEVIAKEIIEERSPAR 270
>gi|358058719|dbj|GAA95682.1| hypothetical protein E5Q_02339 [Mixia osmundae IAM 14324]
Length = 387
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + SK+ PI+S C ++++ P+ E
Sbjct: 159 VVINEADLLSRDAQSALRRTMEKYTTNLRLILCANSTSKIIGPIRSRCLLLRVGAPTDDE 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF----VEGQ--- 112
+V V+ +A++E ++P A +A ++ NLR+A+ + EA + F V G+
Sbjct: 219 MVNVINHVAKKERFEIPRSAALAVAQSASGNLRRALLALEALHTQDPTFQSASVAGKATS 278
Query: 113 --VILTGWEDDITNIATKIIEEQSPKQ 137
V + WE+ + + I+ Q+P+Q
Sbjct: 279 KIVPMPDWEEYCGKVTSTILTSQTPQQ 305
>gi|340382661|ref|XP_003389837.1| PREDICTED: replication factor C subunit 3-like [Amphimedon
queenslandica]
Length = 195
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L E D+L+ DA +R +E Y G ++ C+ SKL P IKS C +++ P+ E
Sbjct: 89 VVLTEVDRLTKDAQHALRRTMELYTGTCRLILVCNSTSKLIPAIKSRCLAVRVPAPTIDE 148
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNS-KNNLRQAIRSFEASR 102
I VL+++ +E + +P LA++IA+ S +N+LR+AI EA R
Sbjct: 149 ICSVLQYVCHKESLTIPDTLAKRIAEKSERNHLRKAILLCEACR 192
>gi|452989910|gb|EME89665.1| hypothetical protein MYCFIDRAFT_57005 [Pseudocercospora fijiensis
CIRAD86]
Length = 357
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ P+++E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRCLLVRVAAPTEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I EVL + + E L +IA SK NLR+A+ FEA N E I W
Sbjct: 192 ICEVLAKVGKDERYTACQPLERRIAKESKRNLRRALLMFEAVHAQNENVSEKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP +
Sbjct: 252 EALIEVIAKEIVEERSPAR 270
>gi|336468523|gb|EGO56686.1| hypothetical protein NEUTE1DRAFT_65455, partial [Neurospora
tetrasperma FGSC 2508]
gi|350289215|gb|EGZ70440.1| putative replication factor C 38K chain, partial [Neurospora
tetrasperma FGSC 2509]
Length = 353
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRCLLVRVAAPTHKE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLASSAKKEGWPIVKGLHQRIAEESGRNLRRALLMYEAVYAQNEKVTDSTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|85110603|ref|XP_963541.1| activator 1 38 kDa subunit [Neurospora crassa OR74A]
gi|30913260|sp|Q8X082.1|RFC5_NEUCR RecName: Full=Replication factor C subunit 5; Short=Replication
factor C5; AltName: Full=Probable activator 1 subunit 5
gi|18376021|emb|CAB91755.2| probable replication factor C 38K chain [Neurospora crassa]
gi|28925224|gb|EAA34305.1| activator 1 38 kDa subunit [Neurospora crassa OR74A]
Length = 352
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S C ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRCLLVRVAAPTHKE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLASSAKKEGWPIVKGLHQRIAEESGRNLRRALLMYEAVYAQNEKVTDSTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|453088544|gb|EMF16584.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 358
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD+L+ DA +R +E+Y L + S + + PI+S C ++++ P++ E
Sbjct: 132 VVINEADQLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRCLLVRVSAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I EVL + + E L +KIA SK NLR+A+ FEA N E I W
Sbjct: 192 ICEVLAKVGKDERYTSCEPLEKKIAKESKRNLRRALLMFEAIHAQNEQISEKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +IIEE+SP +
Sbjct: 252 EALIEVIAKEIIEERSPAR 270
>gi|406859749|gb|EKD12812.1| clamp-loader complex subunit E [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 369
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS++E
Sbjct: 149 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSERE 208
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VLE A +EG + L E+IA S NLR+A+ EA N + I W
Sbjct: 209 ICGVLEKSARKEGWSVSAGLNERIARESGRNLRRALLMLEAVHAQNEKITDNTPIPPPDW 268
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A++I+ E SP +
Sbjct: 269 EALISQVASEIVAEHSPAR 287
>gi|322695635|gb|EFY87440.1| activator 1 38 kDa subunit [Metarhizium acridum CQMa 102]
Length = 352
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD+LS DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADQLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I VL A++EG ++ L E+IA S NLR+A+ +EA N E I W
Sbjct: 192 ICSVLAVSAKKEGWEVVKGLHERIAVESGRNLRRALLMYEAVHAQNEKVSENTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I++E +P +
Sbjct: 252 EALIGQIAKEIMDEHTPAR 270
>gi|452003770|gb|EMD96227.1| hypothetical protein COCHEDRAFT_1152298 [Cochliobolus
heterostrophus C5]
Length = 355
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE-GQVILTGW 118
I +VL + ++EG + L ++IA +S NLR+A+ FEA N + + W
Sbjct: 192 ICDVLSKVGKKEGWKDVESLHQRIAKDSGRNLRKALLMFEAVHAQNEKITDQTHIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP++
Sbjct: 252 EALIEQIARQIVEERSPQR 270
>gi|409048764|gb|EKM58242.1| hypothetical protein PHACADRAFT_171504 [Phanerochaete carnosa
HHB-10118-sp]
Length = 357
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C + SKL PIKS C ++++ P+++E
Sbjct: 132 VVINEADSLTRDAQAALRRTMEKYMSNMRIILCANSTSKLIAPIKSRCLLVRVAAPTEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-- 116
+V V++ +A ++ ++ + + +IA +++ NLR+A+ FEA + M + G + +
Sbjct: 192 MVTVMKHVASRQNFRIEDESVVCEIARDAEGNLRKALLVFEALK-MQTGSLNGPITIAKP 250
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
WE + I +EQSP++
Sbjct: 251 DWETYCIKVGDMITQEQSPQR 271
>gi|451855756|gb|EMD69047.1| hypothetical protein COCSADRAFT_31825 [Cochliobolus sativus ND90Pr]
Length = 355
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE-GQVILTGW 118
I +VL + ++EG + L ++IA +S NLR+A+ FEA N + + W
Sbjct: 192 ICDVLSKVGKKEGWKDIESLHQRIAKDSGRNLRKALLMFEAVHAQNEKITDQTHIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP++
Sbjct: 252 EALIEQIARQIVEERSPQR 270
>gi|302926981|ref|XP_003054403.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735344|gb|EEU48690.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 352
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL A++EG + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAVSAKKEGWPVVKGLHQRIAEESGRNLRRALLMYEAVHAQNEKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEILEEHTPAR 270
>gi|167533047|ref|XP_001748204.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773324|gb|EDQ86965.1| predicted protein [Monosiga brevicollis MX1]
Length = 355
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD+L+ + +R ++E Y + C S L PI+S C +++ P+ E
Sbjct: 132 VVIVEADRLTRKSQQALRRIMESYVSNCRYILICNSSTKILAPIRSRCLQMRVGAPTMSE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR---QMNYPFVEGQVILT 116
+ VL +A++E + +P +L ++I S+ NLR+A+ EASR Q V+ ++
Sbjct: 192 MCAVLHGVAKKEAVTVPDELCQQIVKESRRNLRRALLMLEASRAQIQATSLPVDLPIVRA 251
Query: 117 GWEDDITNIATKIIEEQS 134
WE + A +I+ EQS
Sbjct: 252 DWEVYLRETAERIVTEQS 269
>gi|330906014|ref|XP_003295321.1| hypothetical protein PTT_00410 [Pyrenophora teres f. teres 0-1]
gi|311333479|gb|EFQ96578.1| hypothetical protein PTT_00410 [Pyrenophora teres f. teres 0-1]
Length = 356
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTESE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE-GQVILTGW 118
I VL + ++EG + L ++IA +S NLR+A+ FEA N + + W
Sbjct: 192 ICSVLSKVGKKEGWKDVESLNQRIAKDSGRNLRKALLMFEAVHAQNEKITDQTHIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP++
Sbjct: 252 EALIEQIARQIVEERSPQR 270
>gi|396464153|ref|XP_003836687.1| similar to DNA replication factor C subunit Rfc5 [Leptosphaeria
maculans JN3]
gi|312213240|emb|CBX93322.1| similar to DNA replication factor C subunit Rfc5 [Leptosphaeria
maculans JN3]
Length = 355
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVSAPTETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE-GQVILTGW 118
I EVL + ++EG + L +IA S NLR+A+ FEA N + + W
Sbjct: 192 ICEVLSKVGKKEGWKEVESLNRRIAKESGRNLRKALLMFEAVHAQNEKITDQTHIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP++
Sbjct: 252 EALIEQIARQIVEERSPQR 270
>gi|347828635|emb|CCD44332.1| similar to replication factor C (activator 1) 3 [Botryotinia
fuckeliana]
Length = 354
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y G ++ + S + PI+S ++++ P++ +
Sbjct: 133 VVINEADGLSRDAQAALRRTMEKYSGNVRLILVANSTSGIIGPIRSRTLLVRVGAPTEGD 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV+VLE ++EG + E++A S NLR+A+ +EA+ N E I W
Sbjct: 193 IVKVLETSGKREGWGVSKGFLERVAKESGRNLRRALLMYEAAHAQNEVIAENTPIPPPDW 252
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IA + E +P Q
Sbjct: 253 EALLSTIAHSMTVEHTPAQ 271
>gi|340504015|gb|EGR30507.1| replication factor C, activator 1, putative [Ichthyophthirius
multifiliis]
Length = 355
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL E D+L+ +A +R +E+Y ++ CC ++ + +QP++S C +I++ P + +
Sbjct: 135 VILNEVDRLTLEAQASLRRTMEKYVNRCRLILCCENIGRVIQPLRSRCLLIRVPAPDEGD 194
Query: 60 IVEVLEFIAEQEGI-QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGW 118
I++V++ I QE + + ++ K+ D NLR I + + + +N +G + + W
Sbjct: 195 IIKVVKKIQNQENLPNISEEICRKMGDGFGRNLRDIILNLQMQK-LNKSAFDGGSVKSEW 253
Query: 119 EDDITNIATKIIEEQSP 135
+ +I IA I ++QSP
Sbjct: 254 KKEIGKIAQGIKDQQSP 270
>gi|126644224|ref|XP_001388231.1| replication factor C subunit 5 [Cryptosporidium parvum Iowa II]
gi|126117304|gb|EAZ51404.1| replication factor C subunit 5, putative [Cryptosporidium parvum
Iowa II]
Length = 345
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEIVEV 63
EAD LS A +R +E+Y +++ C +S + P++S C I++ PS +E+++V
Sbjct: 136 EADVLSLKAQAGLRRTMEKYSNNSRLILHCEQLSSIIPPLRSRCLCIRVPLPSPEEVLQV 195
Query: 64 LEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWEDDIT 123
L FI+ E +Q+P+ E+I S+ NLR+AI E + ++ + L W+
Sbjct: 196 LRFISNSENLQVPNNYLEQIVTESECNLRRAILILETAHTQSFSNPPSALKLP-WQKVCI 254
Query: 124 NIATKIIEEQSPK 136
+IAT I++ PK
Sbjct: 255 DIATSIVKNPHPK 267
>gi|116205059|ref|XP_001228340.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88176541|gb|EAQ84009.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 352
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTQDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA S NLR+A+ FEA N + I W
Sbjct: 192 ISDVLAASAKKEGWPVVKGLHQRIAKESGRNLRKALLMFEAVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|407928875|gb|EKG21718.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 354
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++++
Sbjct: 132 VVVNEADHLTRDAQAALRRTMEKYSPNLRLILLAESTSNIIAPIRSRTLLVRVAAPTEED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IVE L+ +EG + L +IA + NLR+A+ FEA N E I W
Sbjct: 192 IVEALKVAGRKEGWKENEGLNRRIARDCGRNLRRALLMFEAVHAQNDSVTENTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE+SP +
Sbjct: 252 EALIAQIAKEIVEERSPAR 270
>gi|440465127|gb|ELQ34467.1| replication factor C subunit 3 [Magnaporthe oryzae Y34]
gi|440488575|gb|ELQ68292.1| replication factor C subunit 3 [Magnaporthe oryzae P131]
Length = 425
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ PS+ E
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSEDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL A++EG + QL E+IA S NLR+A+ E N + I W
Sbjct: 192 ICTVLAASAKKEGWTVSTQLHERIAKESGRNLRRALLMLETVHAQNEKVEDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|389638296|ref|XP_003716781.1| replication factor C subunit 5 [Magnaporthe oryzae 70-15]
gi|351642600|gb|EHA50462.1| replication factor C subunit 5 [Magnaporthe oryzae 70-15]
Length = 352
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ PS+ E
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSEDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL A++EG + QL E+IA S NLR+A+ E N + I W
Sbjct: 192 ICTVLAASAKKEGWTVSTQLHERIAKESGRNLRRALLMLETVHAQNEKVEDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|429857955|gb|ELA32792.1| DNA replication factor c subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 352
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I EVL A++E + L +IA S NLR+A+ +EA N + I W
Sbjct: 192 ICEVLAVSAKKENWPMVKGLHMRIAQESGRNLRRALLMYEAVHAQNEKVTDSTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+EE +P +
Sbjct: 252 EALISQIAREIVEEHTPAR 270
>gi|320586379|gb|EFW99058.1| DNA replication factor c subunit [Grosmannia clavigera kw1407]
Length = 352
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLATSTANIIAPIRSRTLLVRVAAPSHDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL A++EG L ++A+ S NLR+A+ +EA N V+ I W
Sbjct: 192 ICGVLAAAAQREGWPAVPALQRRVAEGSGRNLRRALLMYEAVHAQNEKVVDSTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I ++A +I++E +P +
Sbjct: 252 EALIGHVAKEIMDEHTPAR 270
>gi|367055376|ref|XP_003658066.1| hypothetical protein THITE_2124521 [Thielavia terrestris NRRL 8126]
gi|347005332|gb|AEO71730.1| hypothetical protein THITE_2124521 [Thielavia terrestris NRRL 8126]
Length = 352
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ QE
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHQE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA+ S NLR+A+ EA N + I W
Sbjct: 192 ICDVLAASAKKEGWPVVKGLHQRIAEESGRNLRKALLMLEAVHAQNEKVTDTTDIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA+ II+E++P +
Sbjct: 252 EALIGQIASDIIQERTPTR 270
>gi|209882811|ref|XP_002142841.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558447|gb|EEA08492.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 350
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEI 60
++ E+D LS +A +R +E+Y ++V C +S + P++S C I++ PS EI
Sbjct: 133 VILESDVLSMEAQAGLRRTMEKYAANSRVILHCEQLSSIISPLRSRCLCIRVPLPSHNEI 192
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
V VL IA+ EG+ + ++ I S+ NLR+AI E + N+ + L W+
Sbjct: 193 VHVLSHIAKSEGLNVSNEYLIDITTASEGNLRRAILLLETAAVQNFSLSPSNMKLP-WQR 251
Query: 121 DITNIATKIIEEQSPK 136
+IA +I+ PK
Sbjct: 252 VCNDIAANVIKNPHPK 267
>gi|401881379|gb|EJT45679.1| DNA clamp loader [Trichosporon asahii var. asahii CBS 2479]
Length = 325
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + SK + PI+S C ++++ P+ E
Sbjct: 117 VVINEADSLSRDAQAALRRTMEKYMTNMRLIMCANSTSKIIAPIRSRCLLVRVAAPTDDE 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+A++E LP ++ I + + NLR+A+ EA R N P + G V +
Sbjct: 177 -------VAKKERFTLPPSASDAIIEAADGNLRKALLVMEAMRMQN-PDLNGDVDVAKPD 228
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE IA I++EQSP++
Sbjct: 229 WELYCAKIAESIMQEQSPQR 248
>gi|322705234|gb|EFY96821.1| activator 1 38 kDa subunit [Metarhizium anisopliae ARSEF 23]
Length = 352
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD+LS DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADQLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I VL A++EG + L ++IA S NLR+A+ +EA N E I W
Sbjct: 192 ICSVLAMSAKKEGWGVVKGLHQRIAVESGRNLRRALLMYEAVHAQNEKVSEDTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I++E +P +
Sbjct: 252 EALIGQIAKEIMDEHTPAR 270
>gi|406701717|gb|EKD04831.1| DNA clamp loader [Trichosporon asahii var. asahii CBS 8904]
Length = 325
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + SK + PI+S C ++++ P+ E
Sbjct: 117 VVINEADSLSRDAQAALRRTMEKYMTNMRLIMCANSTSKIIAPIRSRCLLVRVAAPTDDE 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+A++E LP ++ I + + NLR+A+ EA R N P + G V +
Sbjct: 177 -------VAKKERFTLPPSASDAIIEAADGNLRKALLVMEAMRMQN-PDLNGDVDVAKPD 228
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE IA I++EQSP++
Sbjct: 229 WELYCAKIAESIMQEQSPQR 248
>gi|428183987|gb|EKX52843.1| replication factor C subunit 3 [Guillardia theta CCMP2712]
Length = 362
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E DK+S D +R +E+Y + C++ SK ++P++S C +++ P +E
Sbjct: 134 VLLNEVDKMSRDGQAALRRTMEKYTSACRFVLVCNNASKVIEPLRSRCICLRVPAPRDKE 193
Query: 60 IVEVLEFIAEQE-GIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE--GQVILT 116
+ E+L + +E +LP + A KI++ S NLR+A+ E S + + V+ Q L
Sbjct: 194 VEEILCNVYRKEVKKELPVEAATKISNMSNRNLRKALLMLE-STYVKFGVVDESSQPQLA 252
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
WE + IA I+E+QSPK+
Sbjct: 253 DWEVYVGMIAHNILEDQSPKK 273
>gi|346972442|gb|EGY15894.1| replication factor C subunit 5 [Verticillium dahliae VdLs.17]
Length = 350
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ E
Sbjct: 130 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHAE 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL AE+EG + L +IA S NLR+A+ +EA N + I W
Sbjct: 190 ICDVLGQSAEREGWPVAKGLHMRIAQESGRNLRRALLMYEAVHAQNEKVTDATRIPPPDW 249
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 250 EALIGQIAKEIMEEHTPAR 268
>gi|170058101|ref|XP_001864776.1| replication factor C subunit 3 [Culex quinquefasciatus]
gi|167877317|gb|EDS40700.1| replication factor C subunit 3 [Culex quinquefasciatus]
Length = 223
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 23/138 (16%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEI 60
I+L E D+L+ DA +R +E+Y + F C + S++ P S+C
Sbjct: 39 IVLSEVDQLTKDAQHVLRRTMEKYVATCR-FLCVNSTSRVIPANSIC------------- 84
Query: 61 VEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGWE 119
++EGI +P +LA +I S NLR+AI EA + YPF GQ + W+
Sbjct: 85 --------KKEGIDIPPELATRITQKSDYNLRRAILMLEACKVQQYPFTVGQDLPEIDWQ 136
Query: 120 DDITNIATKIIEEQSPKQ 137
+A +I++EQSP++
Sbjct: 137 VFFRKMANQIVQEQSPQK 154
>gi|50304249|ref|XP_452074.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641206|emb|CAH02467.1| KLLA0B12221p [Kluyveromyces lactis]
Length = 355
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y G ++ C +S + PIKS C ++++ PS QE
Sbjct: 138 VIINEADSLTRDAQAALRRTMEKYSGNIRLIMLCDSMSSIIAPIKSRCLLVRVPSPSLQE 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
V +L+ +E I E+IA+ SK NLR ++ + E++ N + L
Sbjct: 198 TVSILQDCCSKEKITAEGNCLERIANLSKGNLRMSLLALESTSLQNELHLRNDTPLNRPD 257
Query: 118 WEDDITNIATKIIEEQS 134
W+ I +A KI++E++
Sbjct: 258 WQLVIHKMARKILKERT 274
>gi|358399724|gb|EHK49061.1| hypothetical protein TRIATDRAFT_133438 [Trichoderma atroviride IMI
206040]
Length = 352
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL A++E ++ L E+IA S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAQSAKKENWEVVKGLHERIAVESGRNLRRALLMYEAVHAQNEKVTDTTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +IIEE +P +
Sbjct: 252 EALIGQIAKEIIEEHTPAR 270
>gi|400600329|gb|EJP68003.1| putative activator 1 subunit 5 [Beauveria bassiana ARSEF 2860]
Length = 352
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ PS +E
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPSHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL + A++E + L ++IA S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAYAAKKENWSVVKGLHQRIAVESGRNLRKALLMYEAVHAQNEKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I IA +I++E +P +
Sbjct: 252 DALIGQIAREIMDEHTPAR 270
>gi|358386824|gb|EHK24419.1| hypothetical protein TRIVIDRAFT_178042 [Trichoderma virens Gv29-8]
Length = 352
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL A++E ++ L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAQSAKKENWEVVKGLHQRIAEESGRNLRRALLMYEAVHAQNEKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + IA +IIEE +P +
Sbjct: 252 EALVGQIAKEIIEEHTPAR 270
>gi|320035707|gb|EFW17648.1| hypothetical protein CPSG_06091 [Coccidioides posadasii str.
Silveira]
gi|392868672|gb|EAS34460.2| replication factor C subunit 5 [Coccidioides immitis RS]
Length = 352
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTAEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L ++IA S NLR+A+ FEA N + V+ W
Sbjct: 192 ICQVLKLSGKREGWSEAPGLNKRIAKESGRNLRRALLMFEAVYAQNEKVTDDTVVPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEIMAERSPAR 270
>gi|156044344|ref|XP_001588728.1| hypothetical protein SS1G_10275 [Sclerotinia sclerotiorum 1980]
gi|154694664|gb|EDN94402.1| hypothetical protein SS1G_10275 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 354
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y G ++ + S + PI+S ++++ P++ +
Sbjct: 133 VVINEADGLSRDAQAALRRTMEKYSGNVRLILVANSTSGIIGPIRSRTLLVRVGAPTEGD 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
IV+VLE ++EG + E++A S NLR+A+ +EA+ N + I W
Sbjct: 193 IVKVLEKSGKREGWGVSRGFLERVAKESGRNLRRALLMYEAAHAQNETINDTTPIPPPDW 252
Query: 119 EDDITNIATKIIEEQSPKQ 137
E ++ IA + E +P Q
Sbjct: 253 EALLSTIAHSMTIEHTPAQ 271
>gi|367015340|ref|XP_003682169.1| hypothetical protein TDEL_0F01470 [Torulaspora delbrueckii]
gi|359749831|emb|CCE92958.1| hypothetical protein TDEL_0F01470 [Torulaspora delbrueckii]
Length = 354
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + C S S + PIKS C +++ P+ QE
Sbjct: 138 VVINEADSLTRDAQAALRRTMEKYSRNIRLIMVCDSMSSIISPIKSRCLMVRCPAPTDQE 197
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEA---SRQMNYPFVEGQVIL 115
+++L + E ++L ++ EKIA S NLR A+ + E + +MN VI
Sbjct: 198 TIKILNEVVTAENVKLESPEVLEKIATTSNGNLRTALLTLETMALNNEMNLRL-NTPVIR 256
Query: 116 TGWEDDITNIATKIIEEQS 134
WE I +A KI +E+S
Sbjct: 257 PDWESVILKMANKIQKERS 275
>gi|367035830|ref|XP_003667197.1| hypothetical protein MYCTH_2312770 [Myceliophthora thermophila ATCC
42464]
gi|347014470|gb|AEO61952.1| hypothetical protein MYCTH_2312770 [Myceliophthora thermophila ATCC
42464]
Length = 352
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA+ S NLR+A+ EA N + I W
Sbjct: 192 ICDVLAASAKKEGWPVVKGLHQRIAEESGRNLRKALLILEAVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAKEIMEEHTPAR 270
>gi|345564932|gb|EGX47888.1| hypothetical protein AOL_s00081g215 [Arthrobotrys oligospora ATCC
24927]
Length = 352
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ E
Sbjct: 130 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTTDE 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL--TG 117
IV+VL+ + + E +++ L ++IA S NLR+A+ FEA N V+ L
Sbjct: 190 IVDVLKGVGKMERLEVKDGLCKRIAVESGRNLRRALLMFEAVYAQN-EVVKDNTPLPPPD 248
Query: 118 WEDDITNIATKIIEEQSPKQ 137
WE I+ IA +I+ E SP +
Sbjct: 249 WEALISQIADEIMAEHSPAR 268
>gi|294656983|ref|XP_002770358.1| DEHA2D18722p [Debaryomyces hansenii CBS767]
gi|199431875|emb|CAR65712.1| DEHA2D18722p [Debaryomyces hansenii CBS767]
Length = 364
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ S + PIKS ++++ PS +E
Sbjct: 138 VIINEADSLSRDAQAALRRTMEKYSANIRIIMICNTTSNIISPIKSRTLLVRIPAPSHKE 197
Query: 60 IVEVLEFIAEQEGIQL-------PHQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPF 108
I +L IA++E ++ + +K++ NS +NLR+A+ FE S +
Sbjct: 198 ISNILSNIADKESVKFNPSNESKKQEFFDKVSKNSDSNLRKALLCFETISMQSESIAINN 257
Query: 109 VEGQVILTGWEDDITNIATKIIEEQS 134
+ +I WE I N+A II ++
Sbjct: 258 TDSAMIALDWEVIIQNLAKSIISNRT 283
>gi|328855373|gb|EGG04500.1| hypothetical protein MELLADRAFT_37376 [Melampsora larici-populina
98AG31]
Length = 363
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I C AD+L+ DA +R +ER+ ++ C + SK + PI+S C ++++ P +
Sbjct: 136 VIHC-ADQLTLDAQAALRRTMERHTSSLRLILCANSTSKIIGPIRSRCLLLRVGAPHPDQ 194
Query: 60 IVEVLEFIAEQEGI--QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ----- 112
IV+VL+ +A +E Q P + A IA +++ NLR+AI + EA R + F + +
Sbjct: 195 IVKVLQSVASKEDFIRQFPEETAMSIALSAEGNLRKAILTLEAIRAQDDTFSKPRPNVES 254
Query: 113 VILTGWEDDITNIATKIIEEQSPKQ 137
+ W+ I +A I EQSP++
Sbjct: 255 IPKVDWQLYIEKLANLIRTEQSPEK 279
>gi|254584388|ref|XP_002497762.1| ZYRO0F12914p [Zygosaccharomyces rouxii]
gi|238940655|emb|CAR28829.1| ZYRO0F12914p [Zygosaccharomyces rouxii]
Length = 352
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C VS + PIKS C +++ P E
Sbjct: 138 VVINEADSLTRDAQAALRRTMEKYSRNVRLIMLCDSVSSIISPIKSRCFMVRCPAPPNDE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
V +L ++A +E +QL ++ + IA S+ NLR+A+ E+ N ++ +I
Sbjct: 198 TVNILNYVASKEKVQLESDEVLKVIAQESEGNLRKALLMLESMALCNEMQLKKSTPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
WE I+ +ATKI +E+S
Sbjct: 258 DWESVISKLATKIQKEKS 275
>gi|189198796|ref|XP_001935735.1| replication factor C subunit 5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982834|gb|EDU48322.1| replication factor C subunit 5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 348
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTESE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNY-PFVEGQVILTGW 118
I VL + ++EG + L ++IA +S NLR+A+ FEA Y PF+ ++
Sbjct: 192 ICSVLSKVGKKEGWKDVESLNQRIAKDSGRNLRKALLMFEAVHAQKYVPFLPTRL----- 246
Query: 119 EDDITNIATKIIEEQSPKQ 137
IA +I+EE+SP++
Sbjct: 247 ---RAQIARQIVEERSPQR 262
>gi|363755746|ref|XP_003648088.1| hypothetical protein Ecym_7452 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892124|gb|AET41271.1| hypothetical protein Ecym_7452 [Eremothecium cymbalariae
DBVPG#7215]
Length = 356
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I++ EAD L+ DA +R +E+Y ++F C +S + PIKS C V+++ P E
Sbjct: 139 IVINEADALTRDAQAALRRTMEKYSRNIRIFMLCDSMSNIIAPIKSRCLVVRVPAPQTLE 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA-SRQMNYPFVEGQVILT-G 117
+ +++E + EG+ Q ++IA+ S NLR A+ + E+ Q + + V++
Sbjct: 199 MAKIMETVCMSEGVTASEQKLQEIAEFSNGNLRLALLTLESMCFQNDLKLTDSAVLIKPD 258
Query: 118 WEDDITNIATKIIEEQS 134
W I +A KI++E+S
Sbjct: 259 WMVVILKLANKILKERS 275
>gi|367006843|ref|XP_003688152.1| hypothetical protein TPHA_0M01430 [Tetrapisispora phaffii CBS 4417]
gi|357526459|emb|CCE65718.1| hypothetical protein TPHA_0M01430 [Tetrapisispora phaffii CBS 4417]
Length = 356
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y K + + C S S + PIKS C +I+ P+ +E
Sbjct: 138 VIINEADSLTRDAQAALRRTMEKYSKNIRLIMICDSMSSIISPIKSRCLMIRSSAPTDEE 197
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-- 116
IV +L+ IAE+EG+ + + +K+A + NLR AI E+ N ++ ++
Sbjct: 198 IVNILKDIAEKEGVTVASDDILKKVAIEADGNLRVAILMLESMALTNELSLKSNTVIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I +A KI E+S
Sbjct: 258 DWLVVILKLANKIQRERS 275
>gi|331236101|ref|XP_003330710.1| replication factor C subunit 3/5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309309700|gb|EFP86291.1| replication factor C subunit 3/5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ AD+L+ DA +R +ER+ ++ C + +K + PI+S C ++++ P+ ++
Sbjct: 132 VVIHGADELTNDAQAALRRTMERHTSTMRLILCATSTAKIIGPIRSRCLLLRVGAPNPEQ 191
Query: 60 IVEVLEFIAEQEGI--QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ----- 112
I +VL ++ + LP + A IA +S NLR+A+ + +A R + F + +
Sbjct: 192 IAQVLNNVSNKASFSTSLPDETAMAIALSSNGNLRRALLTLDAVRAQDETFSKSRTSPDS 251
Query: 113 VILTGWEDDITNIATKIIEEQSPKQ 137
+ WE I +A I +EQSP +
Sbjct: 252 IPRPDWEVYIDKLAGVIAKEQSPDK 276
>gi|50549265|ref|XP_502103.1| YALI0C21692p [Yarrowia lipolytica]
gi|49647970|emb|CAG82423.1| YALI0C21692p [Yarrowia lipolytica CLIB122]
Length = 348
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y K + + S + + PI+S ++++ P++Q+
Sbjct: 132 VIINEADSLSRDAQAALRRTMEKYTKNIRLILLTNSTSNIIAPIRSRTLLVRVAAPTEQD 191
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI---- 114
IV VLE +A +E + L + + EKIA +S NLR+A+ + E Y F + +
Sbjct: 192 IVNVLEKVAAKEHVDLENTKTLEKIASHSDRNLRKALLTLETL----YTFAGSKTVSENT 247
Query: 115 ---LTGWEDDITNIATKIIEEQSP 135
WE I IA +++ ++P
Sbjct: 248 PIPTPDWEMVIGRIARELVSSRTP 271
>gi|296412902|ref|XP_002836158.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629965|emb|CAZ80349.1| unnamed protein product [Tuber melanosporum]
Length = 351
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PIKS +I++ P+ E
Sbjct: 131 VVINEADHLTRDAQAALRRTMEKYSPNLRLILIANSTANIIAPIKSRTLLIRVAAPTIDE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
+V VL+ +AE E + +LA ++A+ S NLR+A+ FEA N + I +
Sbjct: 191 MVGVLKHVAELERFEFSDKLARRVAEESGRNLRRALLMFEALYAQNEVVKDNTPIPPPDY 250
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +++ + SP +
Sbjct: 251 ETLIGQIADELLADHSPAR 269
>gi|213401579|ref|XP_002171562.1| replication factor C subunit 5 [Schizosaccharomyces japonicus
yFS275]
gi|211999609|gb|EEB05269.1| replication factor C subunit 5 [Schizosaccharomyces japonicus
yFS275]
Length = 358
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ + SK+ +P++S +I++ P+ E
Sbjct: 131 VVINEADSLTRDAQAALRRTMEKYSDNIRLILIANSTSKIIEPVRSRTLLIRVAAPTHTE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-------ASRQMNYPFVEGQ 112
IV VL + +Q+ ++ L KIA +S NLR+A+ E SRQ+ G
Sbjct: 191 IVSVLTKVLQQQSLEAAPSLLNKIAQDSDRNLRKALLILETLYAKAPGSRQIMGN--TGS 248
Query: 113 VILTGWEDDITNIATKIIEEQSPKQ 137
+ W++ I +A +I EQSP +
Sbjct: 249 IPKPDWQEFIDKVADAMIAEQSPNR 273
>gi|310794493|gb|EFQ29954.1| clamp-loader complex subunit E [Glomerella graminicola M1.001]
Length = 352
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ ++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++E + L +IA +S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAVSAKKENWPMVKGLHMRIAQDSDRNLRRALLMYEAVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +II+E +P +
Sbjct: 252 EALISQIAREIIDEHTPSR 270
>gi|67612780|ref|XP_667252.1| replication factor C subunit 5 [Cryptosporidium hominis TU502]
gi|54658364|gb|EAL37017.1| replication factor C subunit 5 [Cryptosporidium hominis]
Length = 201
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEIVEV 63
EAD LS A +R +E+Y +++ C +S + P++S C I++ PS +E+++V
Sbjct: 65 EADVLSLKAQAGLRRTMEKYSNNSRLILHCEQLSSIIPPLRSRCLCIRVPLPSPEEVLQV 124
Query: 64 LEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWEDDIT 123
L FI+ E +Q+P+ E+I S+ NLR+AI E + ++ + L W+
Sbjct: 125 LRFISNSENLQVPNNYLEQIVTESECNLRRAILILETAHTQSFSNPPSALKLP-WQKVCI 183
Query: 124 NIATKIIEEQSPKQ 137
+IAT + Q P +
Sbjct: 184 DIATSVSFLQKPPR 197
>gi|327311922|ref|YP_004338819.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
gi|326948401|gb|AEA13507.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
Length = 322
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS + +PI+S C + + P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEMYANTTRFILLANYVSGIIEPIQSRCAIFRFSPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++ L FIAEQEG+++ + + I D ++ ++R+AI + + + M
Sbjct: 165 VLSRLRFIAEQEGVKISQEALDAIFDFTQGDMRRAITALQIASSMT 210
>gi|440638755|gb|ELR08674.1| replication factor C subunit 5 [Geomyces destructans 20631-21]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLADSTANIIAPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL +EG L +L ++A S NLR+A+ FEA N + I W
Sbjct: 192 ICDVLAKTGAKEGWPLAEELNLRVAQESGRNLRRALLMFEAVHAQNEKVTDQTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E SP +
Sbjct: 252 EALISLIADEIMAEHSPAR 270
>gi|145232232|ref|XP_001399568.1| replication factor C subunit 5 [Aspergillus niger CBS 513.88]
gi|134056481|emb|CAK37570.1| unnamed protein product [Aspergillus niger]
gi|350634494|gb|EHA22856.1| hypothetical protein ASPNIDRAFT_46970 [Aspergillus niger ATCC 1015]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS+++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPSEED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ A++EG L ++IA S NLR+A+ FEA N + +I W
Sbjct: 192 ICTVLKNAAKKEGWPEASGLNKRIAKESGRNLRRALLMFEAIYAQNEKVTDNTLIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+ E+SP +
Sbjct: 252 EALIALIAEEILAERSPAR 270
>gi|335748611|gb|AEH58814.1| replication factor C subunit 3 [Karenia brevis]
Length = 354
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ +A + A +R +E+Y ++ C SK+ P++S C +++ PS ++
Sbjct: 133 VVIEDAGASNPQAQAPLRRTMEKYMKTCRIILMCDSASKIIAPLRSRCCAVRVGAPSNED 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR-QMNYPFVEGQVILTGW 118
+ +VL+ +A E +QLP A K+A+ S +LR+A+ E++ Q N +G + GW
Sbjct: 193 VQKVLQKVASAESLQLPPAFAFKVAEKSGRDLRRALLLLESAHAQANQFSKDGILPQEGW 252
Query: 119 EDDITNIATKIIEEQSPK 136
+ I ++ KI++EQSPK
Sbjct: 253 DGAIEKVSKKILQEQSPK 270
>gi|340522517|gb|EGR52750.1| replication factor C, subunit 5-like protein [Trichoderma reesei
QM6a]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I + L A++E ++ L ++IA+ S NLR+A+ EA N + I W
Sbjct: 192 ICDALAQSAKRENWEVVQGLHQRIAEESGRNLRRALLMLEAVHAQNEKVTDTTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +IIEE +P +
Sbjct: 252 EALIGQIAKEIIEEHTPAR 270
>gi|260942391|ref|XP_002615494.1| hypothetical protein CLUG_04376 [Clavispora lusitaniae ATCC 42720]
gi|238850784|gb|EEQ40248.1| hypothetical protein CLUG_04376 [Clavispora lusitaniae ATCC 42720]
Length = 386
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y ++ C+ ++ + PIKS ++++ PSK E
Sbjct: 162 VLINEADSLTRDAQAALRRTMEKYSANIRLIMVCNTIANIIAPIKSRTLLVRIPAPSKGE 221
Query: 60 IVEVLEFIAEQEGIQL--PHQ------LAEKIADNSKNNLRQAIRSFEA----SRQMNYP 107
I +L +AE+E ++ P+ E +A+ S NLR+A+ SFE + +
Sbjct: 222 IASILSGVAEKEAVKFNPPNDDQARQVYLETVAEASDRNLRRALLSFETLCMQNETIQLK 281
Query: 108 FVEGQVILTGWEDDITNIATKIIEE 132
+E I WE I NI I+ E
Sbjct: 282 NLEAAAITLDWELIIQNITKSILSE 306
>gi|326429355|gb|EGD74925.1| replication factor C subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD+L+ A +R ++E+Y + + SK L PI+S C +++ PS E
Sbjct: 131 VVISEADRLTRKAQQALRRIMEKYVHNCRYVLIGNSSSKILAPIRSRCLGLRVGAPSVDE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPFVEGQVIL 115
+ VL + ++EG Q+ A K+A+ S NLR+A+ EA SR + L
Sbjct: 191 LSTVLIDVGKKEGCQVMPGFAAKVANASSRNLRRALLMLEATASQSRGSKVMEATNDIQL 250
Query: 116 TGWEDDITNIATKIIEEQSPKQ 137
WE + A +II +QSP++
Sbjct: 251 PDWEIFLRETAKRIISQQSPQR 272
>gi|389860407|ref|YP_006362646.1| replication factor C small subunit [Thermogladius cellulolyticus
1633]
gi|388525310|gb|AFK50508.1| replication factor C small subunit [Thermogladius cellulolyticus
1633]
Length = 334
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R L+E Y + + SK+ +PI+S C V + P S+++
Sbjct: 115 ILLDEADNMTADAQQALRRLMELYTATTRFILIANYPSKIIEPIQSRCAVFRFTPLSRED 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+VE L++IAE+E ++ + E I + S+ ++R+AI +A+ + VE + G
Sbjct: 175 VVERLKYIAEKENVKYNTEALETIHELSEGDMRKAINILQAASALGEVTVEAVYKVVG 232
>gi|121715792|ref|XP_001275505.1| DNA replication factor C subunit Rfc5, putative [Aspergillus
clavatus NRRL 1]
gi|119403662|gb|EAW14079.1| DNA replication factor C subunit Rfc5, putative [Aspergillus
clavatus NRRL 1]
Length = 352
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ P++++
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I EVLE ++EG L ++IA S+ NLR+A+ FEA + I W
Sbjct: 192 ICEVLENAGKKEGWPEAPGLNQRIAKESERNLRRALLMFEAIYAQTEKVTDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEILAERSPAR 270
>gi|380484475|emb|CCF39972.1| replication factor C subunit 5 [Colletotrichum higginsianum]
Length = 352
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ ++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++E + L +IA S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLAVSAKKENWPMVKGLHMRIAQESGRNLRRALLMYEAVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +II+E +P +
Sbjct: 252 EALISQIAREIIDEHTPAR 270
>gi|19112438|ref|NP_595646.1| DNA replication factor C complex subunit Rfc5 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|30913232|sp|O94697.1|RFC5_SCHPO RecName: Full=Replication factor C subunit 5; Short=Replication
factor C5
gi|4455787|emb|CAB36876.1| DNA replication factor C complex subunit Rfc5 (predicted)
[Schizosaccharomyces pombe]
Length = 358
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ AD+L+ DA +R +E+Y ++ + SK+ +PI+S ++++ P+ +E
Sbjct: 131 VVINVADELTRDAQAALRRTMEKYSNNIRLILIANSTSKIIEPIRSRTLMVRVAAPTPEE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI---RSFEASRQMNYPFVE--GQVI 114
I+ V+ I +G++ P L IA+N NLR+AI + A N ++ Q+
Sbjct: 191 IILVMSKILTAQGLEAPDSLLNNIANNCDRNLRKAILLLETVHAKSPGNKQLIDTGAQLP 250
Query: 115 LTGWEDDITNIATKIIEEQSPKQ 137
L W+ I + +++EQSP +
Sbjct: 251 LPDWQTFIQQVGDSMLQEQSPAR 273
>gi|340975786|gb|EGS22901.1| hypothetical protein CTHT_0013780 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 352
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL A++EG + L ++IA S NLR+A+ E N + I W
Sbjct: 192 ICDVLAASAKREGWPVVKGLHQRIAVESGRNLRKALLMLETVHAQNEKVTDTTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+EE +P +
Sbjct: 252 EALIGQIAREIMEEHTPAR 270
>gi|384484069|gb|EIE76249.1| hypothetical protein RO3G_00953 [Rhizopus delemar RA 99-880]
Length = 160
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ +AD+L+ +A +R +E+Y ++ CC+ +SK+ P++S C +I++ P +E
Sbjct: 51 VVIDKADELTREAQAALRRTMEKYTSSMRLILCCNTLSKIIPPVRSRCLLIRVPRPEIEE 110
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
V L +A +E QL QLA IA++S+ N+R ++ + E +
Sbjct: 111 TVGALLNVASKENFQLSKQLAADIAEHSERNMRASLLALETT 152
>gi|402076632|gb|EJT72055.1| replication factor C subunit 5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 352
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ P+++E
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
+ VL A++EG + +L ++IA S NLR+A+ E N + I W
Sbjct: 192 VCTVLASSAKREGWAVSEKLHQRIAKESGRNLRRAMLMLETVHAQNEKVEDTTSIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + IA +I++E +P +
Sbjct: 252 EALVGQIAKEIMDEHTPAR 270
>gi|354546913|emb|CCE43645.1| hypothetical protein CPAR2_212890 [Candida parapsilosis]
Length = 362
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS ++
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSIED 195
Query: 60 IVEVLEFIAEQEGIQLPH-------QLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ 112
I +L +AE+E ++ Q ++A S NLR+++ +FE N Q
Sbjct: 196 ISSILGHVAEKEHVKFSSTNGQDVDQFYNQVATTSNRNLRRSLLAFETIYMQNETINVKQ 255
Query: 113 ---VILTGWEDDITNIATKIIEEQS 134
VI+ WE I N+A I ++
Sbjct: 256 LHSVIVLDWETVIKNMAKTITNSRT 280
>gi|118431491|ref|NP_147997.2| replication factor C small subunit [Aeropyrum pernix K1]
gi|150421641|sp|Q9YBS7.3|RFCS_AERPE RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|116062816|dbj|BAA80521.2| replication factor C small subunit [Aeropyrum pernix K1]
Length = 325
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD +++DA +R L+E Y + + + SK+ PI+S C + P SKQ+
Sbjct: 108 VLLDEADNMTSDAQQALRRLMELYSSVTRFILIANYPSKIIDPIQSRCAFFRFQPLSKQD 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
++E L +IAE EG+ + + I + S+ ++R+AI +A+ + V+ + G
Sbjct: 168 VIERLRYIAENEGVDYEEEALDAIYEISEGDMRKAINVLQAASYLGKVTVDAVYRVVG 225
>gi|46105402|ref|XP_380505.1| RFC5_NEUCR Probable activator 1 subunit 5 (Replication factor C
subunit 5) (Replication factor C5) [Gibberella zeae
PH-1]
Length = 354
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I VL A++E + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICNVLAVSAKKENWPVVQGLHQRIAEESGRNLRRALLMYEAVHAQNDKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I E +P +
Sbjct: 252 EALIGQIAQEIYAEHTPAR 270
>gi|119190365|ref|XP_001245789.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 357
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTAEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA-------SRQMNYPFVEGQ 112
I +VL+ ++EG L ++IA S NLR+A+ FEA S YP +
Sbjct: 192 ICQVLKLSGKREGWSEAPGLNKRIAKESGRNLRRALLMFEAVYAQKQVSWHSRYP-DDTV 250
Query: 113 VILTGWEDDITNIATKIIEEQSPKQ 137
V WE I+ IA +I+ E+SP +
Sbjct: 251 VPPPDWEALISLIADEIMAERSPAR 275
>gi|408392830|gb|EKJ72144.1| hypothetical protein FPSE_07682 [Fusarium pseudograminearum CS3096]
Length = 354
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTHEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I VL A++E + L ++IA+ S NLR+A+ +EA N + I W
Sbjct: 192 ICNVLAVSAKKENWPVVQGLHQRIAEESGRNLRRALLMYEAVHAQNEKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA I E +P +
Sbjct: 252 EALIGQIAQDIYAEHTPAR 270
>gi|344303368|gb|EGW33642.1| DNA replication factor C [Spathaspora passalidarum NRRL Y-27907]
Length = 360
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS +
Sbjct: 138 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSITD 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAE----KIADNSKNNLRQAIRSFEASRQMN---YPFVEGQ 112
I +L I+ +EGI+ E K++ S NLR+A+ SFE N P
Sbjct: 198 INSILSNISVKEGIKFSSNDLEPFYTKVSTASNRNLRRALLSFETLTMQNETIKPETNLS 257
Query: 113 VILTGWEDDITNIATKI 129
+I WE I NIA I
Sbjct: 258 IINLDWEVIIKNIANNI 274
>gi|258565365|ref|XP_002583427.1| activator 1 38 kDa subunit [Uncinocarpus reesii 1704]
gi|237907128|gb|EEP81529.1| activator 1 38 kDa subunit [Uncinocarpus reesii 1704]
Length = 352
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANSTANIIAPIRSRTLLVRVAAPTEDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ A++EG L ++IA S NLR+A+ EA N V+ W
Sbjct: 192 ICQVLKAAAKKEGWTEAPGLNKRIAKESGRNLRRALLMLEAVYAQNEKVTNDTVVPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVAEEIMAERSPAR 270
>gi|352682669|ref|YP_004893193.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
gi|350275468|emb|CCC82115.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
Length = 321
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD +++DA +R ++E Y + + VS + +PI+S C V + P K
Sbjct: 105 VVLDEADNMTSDAQQALRRIMEMYAATTRFVLLANYVSGIIEPIQSRCAVFRFSPLPKDA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+V L +IAEQEG+++ E I D ++ ++R+AI + +
Sbjct: 165 VVARLRYIAEQEGLKVTQDALEAIFDFTQGDMRRAITALQ 204
>gi|126466118|ref|YP_001041227.1| replication factor C small subunit [Staphylothermus marinus F1]
gi|158513390|sp|A3DNV9.1|RFCS_STAMF RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|126014941|gb|ABN70319.1| replication factor C small subunit [Staphylothermus marinus F1]
Length = 329
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK+ +PI+S C V + P K++
Sbjct: 112 VLLDEADNMTADAQQALRRLMEMYTATTRFILIANYPSKIIEPIQSRCAVFRFAPLKKED 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
++ L++IAEQE +++ + E I D S+ ++R+AI +A+ + V+ + G
Sbjct: 172 VISRLKWIAEQEKVEIDEEALEAIHDLSEGDMRRAINILQAAAALGKVTVDSVYKVVG 229
>gi|303274701|ref|XP_003056666.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461018|gb|EEH58311.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 331
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++TDA +R +E + + + F C+ VS++ +PI S C + P +
Sbjct: 115 LILDEADSMTTDAQSALRRTMETHSKVTRFFILCNYVSRIIEPIASRCAKFRFKPLGSEV 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ + L+ IAE+EG+ L + + A +S ++R+AI ++S ++ G LTG
Sbjct: 175 MSDRLKHIAEREGLTLGEGVYDAAAKHSGGDMRKAITLLQSSARLF-----GAKELTG-- 227
Query: 120 DDITNIATKIIEE 132
+DI +A I E+
Sbjct: 228 EDIIAVAGAIAED 240
>gi|346326608|gb|EGX96204.1| replication factor C subunit 5 [Cordyceps militaris CM01]
Length = 352
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ PS ++
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVPAPSHEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I +VL A++E + L ++IA S NLR+A+ +EA N + I W
Sbjct: 192 ICDVLASAAKKENWSVIKGLHQRIAVESGRNLRKALLMYEAVHAQNEKVTDSTPIPPADW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
+ I IA +I++E +P +
Sbjct: 252 DALIGQIAKEIMDEHTPAR 270
>gi|358365640|dbj|GAA82262.1| DNA replication factor C subunit Rfc5 [Aspergillus kawachii IFO
4308]
Length = 352
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+++E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPNEEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL A++EG L ++IA S NLR+A+ FEA N + +I W
Sbjct: 192 ICTVLRNAAKKEGWPEASGLNKRIAKESGRNLRRALLMFEAIYAQNEKVTDNTLIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I A +I+ E+SP +
Sbjct: 252 EALIALTAEEILAERSPAR 270
>gi|324520157|gb|ADY47571.1| Replication factor C subunit 3, partial [Ascaris suum]
Length = 354
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L E ++L+ DA +R +E+Y ++ CC ++K + P++S C I++ PS +
Sbjct: 132 VVLMEVEQLTRDAQHALRRTMEKYSATCRLILCCESIAKVIDPLRSRCMAIRVAAPSDHD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT-GW 118
VEV++ + + E + +P + + N+R+ + EA + + E Q + W
Sbjct: 192 AVEVVKVVCKAENVAIPDTAVASVVKKACGNMRRILLMVEAIKAQSCASEENQFLPEPDW 251
Query: 119 EDDITNIATKIIEEQS 134
E + A I+++QS
Sbjct: 252 EVYLKETARMILQQQS 267
>gi|255088619|ref|XP_002506232.1| predicted protein [Micromonas sp. RCC299]
gi|226521503|gb|ACO67490.1| predicted protein [Micromonas sp. RCC299]
Length = 329
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E Y + + F C+ +S++ +PI S C + P +
Sbjct: 114 LILDEADSMTNDAQSALRRTMETYSKVTRFFILCNYISRIIEPIASRCAKFRFKPLGHEV 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ + L+FIA EG+ L E + +S ++R+AI +++ ++ G +TG E
Sbjct: 174 MGDRLKFIATAEGLTLGEGCYEACSTHSGGDMRKAITLLQSAARLF-----GTATITGKE 228
Query: 120 DDITNIATKIIEEQ 133
IT +A + E+Q
Sbjct: 229 --ITAVAGAVDEDQ 240
>gi|378734260|gb|EHY60719.1| replication factor C subunit 5 [Exophiala dermatitidis NIH/UT8656]
Length = 354
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKG-LNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y + + S + PI+S ++++ P++ E
Sbjct: 132 VVINEADGLSRDAQAALRRTMEKYSANVRLILVANSTAGIIAPIRSRTLLVRVAAPTETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN-YPFVEGQVILTGW 118
I +VL A++E ++ L E+IA S NLR+A+ FEA N P + + W
Sbjct: 192 ICDVLAKAAKKENWKVIPALNERIAKESNRNLRKALLMFEAVYAQNPEPNEKTPISPPDW 251
Query: 119 EDDITNIATKIIEEQSP 135
E + IA I+ E++P
Sbjct: 252 EILVEQIARDIVRERTP 268
>gi|336476385|ref|YP_004615526.1| replication factor C [Methanosalsum zhilinae DSM 4017]
gi|335929766|gb|AEH60307.1| Replication factor C [Methanosalsum zhilinae DSM 4017]
Length = 317
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY G + C+ SK+ +PI+S C V + P + +
Sbjct: 105 IFLDEADALTSDAQSALRRTMERYTGNCRFILSCNYSSKIIEPIQSRCAVYRFRPLADEP 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + ++A+ EGI+L + I ++ ++R+A+ + +A+
Sbjct: 165 VKERIRYVADAEGIKLADDAIDAIGYVAQGDMRKALNALQAA 206
>gi|295674217|ref|XP_002797654.1| replication factor C subunit 3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280304|gb|EEH35870.1| replication factor C subunit 3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRVILLANSTANIISPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++E L ++IA S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKENWAEAPGLNKRIAKESGRNLRRALLMFEAIYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISVIADEIMAERSPAR 270
>gi|115383958|ref|XP_001208526.1| activator 1 38 kDa subunit [Aspergillus terreus NIH2624]
gi|114196218|gb|EAU37918.1| activator 1 38 kDa subunit [Aspergillus terreus NIH2624]
Length = 352
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEDE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL ++EG + L ++IA S NLR+A+ FEA N + I W
Sbjct: 192 ICTVLSTAGQREGWTVAPGLNKRIAQESGRNLRRALLMFEAIYAQNEKVTDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I +A +I+ E+SP +
Sbjct: 252 EVVIQMMAHEILAERSPAR 270
>gi|435850632|ref|YP_007312218.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661262|gb|AGB48688.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 333
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY + C+ SK+ +PI+S C V + P S
Sbjct: 120 IFLDEADALTSDAQAALRRTMERYTNNCRFILSCNYSSKIIEPIQSRCAVYRFRPLSDDA 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + F+A EGI++ E I ++ ++R+AI + +A+
Sbjct: 180 VTERVRFVASNEGIEVATDGMEAIKYVAQGDMRKAINALQAA 221
>gi|68472569|ref|XP_719603.1| hypothetical protein CaO19.9577 [Candida albicans SC5314]
gi|46441427|gb|EAL00724.1| hypothetical protein CaO19.9577 [Candida albicans SC5314]
gi|238881908|gb|EEQ45546.1| activator 1 40 kDa subunit [Candida albicans WO-1]
Length = 362
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS +
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVDD 195
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEA-SRQMNYPFVEG 111
I +L +AE+E ++ + K+A+ S NLR+ + SFE S Q V
Sbjct: 196 INHILGHVAEKESLKFSTHNDSEINHFYSKVAETSNRNLRRCLLSFETISMQNETINVRS 255
Query: 112 QV--ILTGWEDDITNIATKIIEEQS 134
V I WE I N+A I + Q+
Sbjct: 256 DVAKIALDWEAIIRNMAISIQKNQN 280
>gi|68472826|ref|XP_719478.1| hypothetical protein CaO19.2029 [Candida albicans SC5314]
gi|46441297|gb|EAL00595.1| hypothetical protein CaO19.2029 [Candida albicans SC5314]
Length = 362
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVDN 195
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEA-SRQMNYPFVEG 111
I +L +AE+E ++ + KIA+ S NLR+ + SFE S Q V
Sbjct: 196 INHILGHVAEKESLKFSTHNDSEINHFYSKIAETSNRNLRRCLLSFETISMQNETINVRS 255
Query: 112 QV--ILTGWEDDITNIATKIIEEQS 134
V I WE I N+A I + Q+
Sbjct: 256 DVAKIALDWEAIIRNMAISIQKNQN 280
>gi|390348565|ref|XP_001196153.2| PREDICTED: replication factor C subunit 3-like [Strongylocentrotus
purpuratus]
Length = 180
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
I ++L+ + ++EG+ LP +LA++IA+ S+ NLR+AI S EA + YPF Q I W
Sbjct: 16 ITQILQNVCKKEGLNLPSELAKRIAEKSERNLRKAILSCEACKVQQYPFSADQDIPEADW 75
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + + A II++QSP+Q
Sbjct: 76 EVFLRDTANHIIQQQSPRQ 94
>gi|226286726|gb|EEH42239.1| replication factor C subunit 5 [Paracoccidioides brasiliensis Pb18]
Length = 354
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 138 VVINEADHLTRDAQAALRRTMEKYSPNLRVILLANSTANIIAPIRSRTLLVRVAAPTEAE 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++E L ++IA S NLR+A+ FEA N + I W
Sbjct: 198 ICQVLKLAGKKENWAEAPGLNKRIAKESGRNLRRALLMFEAIYAQNEKVTDDTPIPPPDW 257
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 258 EALISVIADEIMAERSPAR 276
>gi|225684714|gb|EEH22998.1| replication factor C subunit 5 [Paracoccidioides brasiliensis Pb03]
Length = 352
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRVILLANSTANIIAPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++E L ++IA S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKENWAEAPGLNKRIAKESGRNLRRALLMFEAIYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISVIADEIMAERSPAR 270
>gi|315050902|ref|XP_003174825.1| replication factor C subunit 5 [Arthroderma gypseum CBS 118893]
gi|311340140|gb|EFQ99342.1| replication factor C subunit 5 [Arthroderma gypseum CBS 118893]
Length = 352
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVAAPSEED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEIMAERSPAR 270
>gi|308807567|ref|XP_003081094.1| replication factor C 37 kDa subunit (ISS) [Ostreococcus tauri]
gi|116059556|emb|CAL55263.1| replication factor C 37 kDa subunit (ISS) [Ostreococcus tauri]
Length = 342
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD ++TDA MR ++E Y + + F C+ V+K + PI S C + P + +
Sbjct: 124 LILDEADAMTTDAQSAMRRMMETYSKVTRFFLLCNYVTKIIDPITSRCAKFRFQPLALET 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE--GQVILTG 117
+ L++IAEQE ++L + + +S ++R+AI +++ ++ V+ G V + G
Sbjct: 184 MTTRLKYIAEQESLELSDDVFPACSKHSGGDMRKAITLLQSAARLFSGKVDAAGIVEVAG 243
Query: 118 WEDDI 122
+ D+
Sbjct: 244 YIPDV 248
>gi|406602446|emb|CCH45987.1| putative replication factor C subunit 3 [Wickerhamomyces ciferrii]
Length = 344
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y K + V + + + PIKS +I++ P+ Q+
Sbjct: 123 VIINEADSLSRDAQAALRRTMEKYSKNIRLVLISNTTSNIIAPIKSRTLLIRISAPNLQD 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAE------KIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
I ++L+ ++E++ + LP E ++A SK NLR+A+ +FEA N
Sbjct: 183 ITKILDKLSEKQEVSLPSSQEERELILNRVAIASKRNLRRALLNFEALVMQNQELKTTTP 242
Query: 114 ILT-GWEDDITNIATKIIEEQS 134
++T WE I +A+ I +++
Sbjct: 243 MITLDWEGVILKLASNISRDRN 264
>gi|45187570|ref|NP_983793.1| ADL303Cp [Ashbya gossypii ATCC 10895]
gi|44982308|gb|AAS51617.1| ADL303Cp [Ashbya gossypii ATCC 10895]
gi|374107005|gb|AEY95913.1| FADL303Cp [Ashbya gossypii FDAG1]
Length = 355
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y + + + C S S + PIKS C ++++ P+ E
Sbjct: 138 VIINEAESLTRDAQAALRRTMEKYSRNIRVIMLCDSLSSIIAPIKSRCMLVRVPAPAPAE 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA-SRQMNYPFVEGQVILT-G 117
+V ++E + QEG+ +IA+ + NLR A+ + E+ Q N + +T
Sbjct: 198 MVAIMERVCTQEGVTASEHKLYEIAEFADGNLRLALLTLESMCIQHNLKLTDTSTTVTPD 257
Query: 118 WEDDITNIATKIIEEQS 134
W + +A K+++E++
Sbjct: 258 WMLVVCRLANKVLKERT 274
>gi|298675837|ref|YP_003727587.1| replication factor C [Methanohalobium evestigatum Z-7303]
gi|298288825|gb|ADI74791.1| Replication factor C [Methanohalobium evestigatum Z-7303]
Length = 318
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +ERY + C+ SK+ +PI+S C V + S +
Sbjct: 105 IFLDEADALTPDAQSALRRTMERYTNNCRFILSCNYSSKIIEPIQSRCAVYRFRSLSYEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + + +IAEQEG+Q+ E I S+ ++R+AI + +AS
Sbjct: 165 VEKRVRYIAEQEGLQISEDGVEAIKYVSQGDMRKAINALQAS 206
>gi|347524285|ref|YP_004781855.1| Replication factor C [Pyrolobus fumarii 1A]
gi|343461167|gb|AEM39603.1| Replication factor C [Pyrolobus fumarii 1A]
Length = 327
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK+ +PI+S C + + P K++
Sbjct: 109 VLLDEADNMTADAQQALRRLMEMYTASTRFILIANYPSKIIEPIQSRCAIFRFTPLKKED 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+V L++I EQEG Q + E I + S+ ++R+AI +A+ + VE + G
Sbjct: 169 VVARLKWICEQEGCQYDEEALETIYEISEGDMRRAINILQAAAALGKVTVEAVYKVVG 226
>gi|145350673|ref|XP_001419724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579956|gb|ABO98017.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 342
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E Y + + F C+ V+K+ PI S C + P +++
Sbjct: 124 LILDEADAMTGDAQSALRRMMETYSKVTRFFLLCNYVTKIIDPIASRCAKFRFSPLAQET 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+ L+FI EQEG+++ + + +S ++R+AI +++ ++ + G I+
Sbjct: 184 MGARLKFIGEQEGLEMSDDVFAMCSKHSGGDMRKAITLLQSAARLFAGKISGASIV 239
>gi|118353287|ref|XP_001009848.1| Replication factor C subunit, putative [Tetrahymena thermophila]
gi|89291681|gb|EAR89669.1| Replication factor C subunit, putative [Tetrahymena thermophila
SB210]
Length = 358
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
II+ E D+L+ +A +R +E+Y G ++ ++ + + P++S C +I++ PS+Q+
Sbjct: 135 IIINEVDRLTLEAQASLRRTMEKYIGRCRLILIAENIGRVILPLRSRCLLIRVAAPSEQD 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG-QVILTGW 118
+ V+ + ++ + +P LA K A + NLR I + + + + + +V W
Sbjct: 195 VKAVVRKLNNEKNLNIPDDLACKFAKSCDYNLRAVILNLQTQKLLKSTYNNSMEVQEPEW 254
Query: 119 EDDITNIATKIIEEQSP 135
+ +I NIA I E Q+P
Sbjct: 255 KKEIKNIAGIIKEHQNP 271
>gi|297527205|ref|YP_003669229.1| Replication factor C [Staphylothermus hellenicus DSM 12710]
gi|297256121|gb|ADI32330.1| Replication factor C [Staphylothermus hellenicus DSM 12710]
Length = 329
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK+ +PI+S C V + P K++
Sbjct: 112 VLLDEADNMTADAQQALRRLMEMYTATTRFILIANYPSKIIEPIQSRCAVFRFAPLKKED 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
++ L++IA QE +++ + E I D S+ ++R+AI +A+ + V+ + G
Sbjct: 172 VISRLKWIANQEKVEVDEEALEAIHDLSEGDMRRAINILQAAAALGRVTVDSVYKVVG 229
>gi|307596342|ref|YP_003902659.1| replication factor C [Vulcanisaeta distributa DSM 14429]
gi|307551543|gb|ADN51608.1| Replication factor C [Vulcanisaeta distributa DSM 14429]
Length = 342
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + + VS++ PI+S C + + P K
Sbjct: 107 VILDEADNMTSDAQQALRRMMEMYANVTRFILIANYVSRIIDPIQSRCAMFRFSPLPKDA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L IA +EG+++ ++ E I D S+ ++R+AI + +A+
Sbjct: 167 VLGRLREIASKEGVKVTNEALEAIWDVSQGDMRKAINTLQAA 208
>gi|302657734|ref|XP_003020582.1| hypothetical protein TRV_05324 [Trichophyton verrucosum HKI 0517]
gi|291184430|gb|EFE39964.1| hypothetical protein TRV_05324 [Trichophyton verrucosum HKI 0517]
Length = 299
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 103 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVPAPSEDD 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 163 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 222
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 223 EALISVVADEIMAERSPAR 241
>gi|241950693|ref|XP_002418069.1| activator 1 40 kda subunit, putative; replication factor c subunit
5, putative; replication factor c5, putative [Candida
dubliniensis CD36]
gi|223641408|emb|CAX43368.1| activator 1 40 kda subunit, putative [Candida dubliniensis CD36]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS +
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVDD 195
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEA-SRQMNYPFVEG 111
I +L +AE+E ++ K+A+ S NLR+ + SFE S Q V
Sbjct: 196 INHILSHVAEKESLKFNTNNDSEIDHFYSKVAEASNRNLRRCLLSFETISMQAETINVRS 255
Query: 112 QV--ILTGWEDDITNIATKIIEEQS 134
V + WE + N+A I + Q+
Sbjct: 256 DVAKVALDWETIVRNMAINIQKNQN 280
>gi|255723854|ref|XP_002546856.1| activator 1 40 kDa subunit [Candida tropicalis MYA-3404]
gi|240134747|gb|EER34301.1| activator 1 40 kDa subunit [Candida tropicalis MYA-3404]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS +
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVDD 195
Query: 60 IVEVLEFIAEQEGIQL--PHQLAEK-----IADNSKNNLRQAIRSFEASRQMNYPFVE-- 110
I +L +AE E I+ ++LA K IA S NLR+ + SFE+ N
Sbjct: 196 ISNILNNVAESEAIKFKATNELAMKKFYNDIATTSNRNLRRCLLSFESISMQNETIDTNS 255
Query: 111 --GQVILTGWEDDITNIATKI 129
G++ L WE ITN+A I
Sbjct: 256 DVGKLEL-DWEVIITNMANNI 275
>gi|326469753|gb|EGD93762.1| DNA replication factor C subunit [Trichophyton tonsurans CBS
112818]
Length = 352
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVPAPSEDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEIMAERSPAR 270
>gi|302509034|ref|XP_003016477.1| hypothetical protein ARB_04766 [Arthroderma benhamiae CBS 112371]
gi|291180047|gb|EFE35832.1| hypothetical protein ARB_04766 [Arthroderma benhamiae CBS 112371]
Length = 356
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVPAPSEDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEIMAERSPAR 270
>gi|326485099|gb|EGE09109.1| DNA replication factor C subunit Rfc5 [Trichophyton equinum CBS
127.97]
Length = 352
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVPAPSEDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEIMAERSPAR 270
>gi|325968175|ref|YP_004244367.1| replication factor C small subunit [Vulcanisaeta moutnovskia
768-28]
gi|323707378|gb|ADY00865.1| replication factor C small subunit [Vulcanisaeta moutnovskia
768-28]
Length = 338
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++DA +R ++E Y + + + VS++ PI+S C + + P K
Sbjct: 107 IILDEADNMTSDAQQALRRMMEMYANVTRFILIANYVSRIIDPIQSRCAMFRFSPLPKDA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L IA +EG+++ + E I D S+ ++R+AI + +A+
Sbjct: 167 VLGRLRDIASREGVKVTDEALEAIWDISQGDMRKAINTLQAA 208
>gi|67540260|ref|XP_663904.1| RFC5_NEUCR Probable activator 1 subunit 5 (Replication factor C
subunit 5) (Replication factor C5) [Aspergillus nidulans
FGSC A4]
gi|40739494|gb|EAA58684.1| RFC5_NEUCR Probable activator 1 subunit 5 (Replication factor C
subunit 5) (Replication factor C5) [Aspergillus nidulans
FGSC A4]
gi|259479486|tpe|CBF69752.1| TPA: DNA replication factor C subunit Rfc5, putative
(AFU_orthologue; AFUA_2G12250) [Aspergillus nidulans
FGSC A4]
Length = 352
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + S + + PI+S ++++ PS+++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANSTSNIIAPIRSRTLLVRVAAPSEED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +L A++EG +L ++IA S NLR+A+ FEA + + I W
Sbjct: 192 ICTILSTSAKREGWNEAPELNKRIAKESGRNLRRALLMFEAIYAQSEKVSDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISVIAEEILAERSPAR 270
>gi|327303738|ref|XP_003236561.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
gi|326461903|gb|EGD87356.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
Length = 352
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVPAPSEDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQVLKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNEKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEIMAERSPAR 270
>gi|448514010|ref|XP_003867042.1| Rfc5 hypothetical proteineteropentameric replication factor C
subunit [Candida orthopsilosis Co 90-125]
gi|380351380|emb|CCG21604.1| Rfc5 hypothetical proteineteropentameric replication factor C
subunit [Candida orthopsilosis Co 90-125]
Length = 362
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS +
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVEN 195
Query: 60 IVEVLEFIAEQEGIQLPH-------QLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ 112
I +L +AE+E ++ Q ++A S NLR+++ +FE N Q
Sbjct: 196 ISSILGHVAEKEHVKFSSSNGQEIAQFYSQVATTSHCNLRRSLLAFETIYMQNETINVKQ 255
Query: 113 ---VILTGWEDDITNIATKIIEEQS 134
VI+ WE I N+A I ++
Sbjct: 256 LHSVIVLDWEIVIKNMAKTITTSRN 280
>gi|146304798|ref|YP_001192114.1| replication factor C small subunit [Metallosphaera sedula DSM 5348]
gi|145703048|gb|ABP96190.1| replication factor C small subunit [Metallosphaera sedula DSM 5348]
Length = 326
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ PI+S + + P K++
Sbjct: 106 VLLDEADNMTADAQQALRRTMELYTETTRFILACNYLSKIIDPIQSRTALFRFYPLKKED 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ LEFI +QEG+Q + + I D + ++R+AI +A+
Sbjct: 166 VISRLEFIMKQEGVQYDPKALDVIYDVTNGDMRKAINVLQAA 207
>gi|154281829|ref|XP_001541727.1| activator 1 38 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150411906|gb|EDN07294.1| activator 1 38 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 352
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPAEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L ++IA S NLR+A+ EA N + I W
Sbjct: 192 ICQVLKLAVKKEGWTEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ ++SP +
Sbjct: 252 EALISLIADEIMADRSPGR 270
>gi|428170599|gb|EKX39523.1| replication factor C, subunit RFC4 [Guillardia theta CCMP2712]
Length = 324
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++TDA +R +E + + C+ VS++ PI S C + P S +
Sbjct: 111 VILDEADCMTTDAQSALRRTMETCTRVTRFCIICNYVSRIISPIASRCAKFRFQPVSTEV 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
++E L IA++EG QLP + + + + S +LR+AI + + ++ ++GQ I+
Sbjct: 171 MLERLNMIADKEGFQLPSDVTDALVNISGGDLRRAITMMQNTYILHGNSMKGQDII 226
>gi|332796204|ref|YP_004457704.1| DNA replication factor C, small subunit [Acidianus hospitalis W1]
gi|332693939|gb|AEE93406.1| DNA replication factor C, small subunit [Acidianus hospitalis W1]
Length = 326
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + C+ +SK+ PI+S + + P K++
Sbjct: 106 ILLDEADNMTADAQQALRRTMELYTESTRFILACNYLSKIIDPIQSRTALFRFYPLKKED 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V LEFIA++E ++ + E I D + ++R+AI + +A+
Sbjct: 166 VVSRLEFIAKEEKVEYDEKALETIYDVTMGDMRKAINTLQAA 207
>gi|340382408|ref|XP_003389711.1| PREDICTED: replication factor C subunit 3-like, partial [Amphimedon
queenslandica]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL+++ +E + +P LA++IA+ S+ NLR+AI EA R YPF + QV+ W
Sbjct: 1 ICSVLQYVCHKESLTIPDTLAKRIAEKSERNLRKAILLCEACRVQQYPFNDDQVVPDCEW 60
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A II EQSPK+
Sbjct: 61 EVFLRETAAMIITEQSPKR 79
>gi|145504098|ref|XP_001438021.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405182|emb|CAK70624.1| unnamed protein product [Paramecium tetraurelia]
Length = 356
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ E D L+ +A +R +E+Y ++ C ++K+ PI+S C +I++ P + +
Sbjct: 136 VIINEVDNLTKEAQASLRRTMEKYIERCRIILICESLAKIINPIRSRCLLIRVPAPDQTQ 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG-W 118
+ ++L+ I+ Q ++ QL KIA S NLR+AI +++R N + Q I W
Sbjct: 196 VAQILDKISAQYNCKISQQLINKIAIASNGNLREAILYLQSTRVNNTCIKDDQNIAAQEW 255
Query: 119 EDDI-TNIATKIIEEQ 133
+ I NI I++ Q
Sbjct: 256 KLHIQHNIVMPIVKNQ 271
>gi|410670416|ref|YP_006922787.1| replication factor C [Methanolobus psychrophilus R15]
gi|409169544|gb|AFV23419.1| replication factor C [Methanolobus psychrophilus R15]
Length = 301
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY + C+ SK+ +PI+S C V + P S +
Sbjct: 88 IFLDEADALTSDAQSALRRTMERYTNNCRFILSCNYSSKIIEPIQSRCAVYRFRPLSDEA 147
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + F+A+ EG+ + + I ++ ++R+AI S +A+
Sbjct: 148 VAGRVRFVAQNEGLDIAEDGVDAIKYVAQGDMRKAINSLQAA 189
>gi|71001752|ref|XP_755557.1| DNA replication factor C subunit Rfc5 [Aspergillus fumigatus Af293]
gi|66853195|gb|EAL93519.1| DNA replication factor C subunit Rfc5, putative [Aspergillus
fumigatus Af293]
Length = 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ ++EG L ++IA S NLR+A+ FEA + I W
Sbjct: 192 ICSVLQNAGKREGWPEAPGLNKRIAKESDRNLRRALLMFEAIYAQTEKVTDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEILAERSPAR 270
>gi|159129619|gb|EDP54733.1| DNA replication factor C subunit Rfc5, putative [Aspergillus
fumigatus A1163]
Length = 355
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ ++EG L ++IA S NLR+A+ FEA + I W
Sbjct: 192 ICSVLQNAGKREGWPEAPGLNKRIAKESDRNLRRALLMFEAIYAQTEKVTDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEILAERSPAR 270
>gi|119481309|ref|XP_001260683.1| DNA replication factor C subunit Rfc5, putative [Neosartorya
fischeri NRRL 181]
gi|119408837|gb|EAW18786.1| DNA replication factor C subunit Rfc5, putative [Neosartorya
fischeri NRRL 181]
Length = 355
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++++
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEEQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ ++EG L ++IA S NLR+A+ FEA + I W
Sbjct: 192 ICSVLQNAGKREGWPEAPGLNKRIAKESDRNLRRALLMFEAIYAQTEKVTDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEILAERSPAR 270
>gi|348688417|gb|EGZ28231.1| hypothetical protein PHYSODRAFT_551952 [Phytophthora sojae]
Length = 339
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R ++E Y + + C+ VS++ +P+ S C + P +
Sbjct: 123 IVLDEADSMTGDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRFAPLERGS 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + FIA +E + +P + E + + S +LR+AI ++++Q+
Sbjct: 183 MASRVRFIASEEHVNVPDPVLESLLECSNGDLRKAINYLQSAKQL 227
>gi|225563283|gb|EEH11562.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 608
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 388 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPAEAE 447
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++EG L ++IA S NLR+A+ EA N + I W
Sbjct: 448 ICQVLKLAVKKEGWTEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 507
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ ++SP +
Sbjct: 508 EALISLIADEIMADRSPGR 526
>gi|212537245|ref|XP_002148778.1| DNA replication factor C subunit Rfc5, putative [Talaromyces
marneffei ATCC 18224]
gi|210068520|gb|EEA22611.1| DNA replication factor C subunit Rfc5, putative [Talaromyces
marneffei ATCC 18224]
Length = 352
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS+ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPSETE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL+ A +E +L +IA S NLR+A+ FEA N + I W
Sbjct: 192 ICAVLKSAAAKENWAPCDELNMRIAKESGRNLRRALLMFEAIYAQNEKVSDKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISMVADEILAERSPAR 270
>gi|150864072|ref|XP_001382764.2| DNA replicationn factor C [Scheffersomyces stipitis CBS 6054]
gi|149385328|gb|ABN64735.2| DNA replicationn factor C [Scheffersomyces stipitis CBS 6054]
Length = 363
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS
Sbjct: 138 VVINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIPPIKSRTLLVRIPSPSTTA 197
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ 112
I +L +A++EGI+ + +AD + NLR+A+ SFE N
Sbjct: 198 ISSILGQVAKKEGIKFSSSNELDIQKYLVTLADTANRNLRKALLSFETVAMQNETIQLDN 257
Query: 113 VILT----GWEDDITNIATKI 129
LT WE+ I N++ I
Sbjct: 258 KTLTIVTLDWEEIIKNMSNTI 278
>gi|330507468|ref|YP_004383896.1| replication factor C small subunit [Methanosaeta concilii GP6]
gi|328928276|gb|AEB68078.1| replication factor C small subunit [Methanosaeta concilii GP6]
Length = 323
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +ERY + C+ SK+ +PI+S C V + P S +
Sbjct: 107 IFLDEADALTNDAQSALRRTMERYSATTRFILSCNYSSKIIEPIQSRCAVYRFKPLSPEA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + ++FIA +EG+++ I + ++R+AI + +A+
Sbjct: 167 VTKRIKFIASEEGLRVSDGGLSAIEYVAGGDMRKAINALQAA 208
>gi|116753581|ref|YP_842699.1| replication factor C small subunit [Methanosaeta thermophila PT]
gi|116665032|gb|ABK14059.1| replication factor C small subunit [Methanosaeta thermophila PT]
Length = 305
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY + C+ SK+ +PI+S C V + +
Sbjct: 87 IFLDEADALTSDAQSALRRTMERYSATCRFILSCNYSSKIIEPIQSRCAVYRFRALTPDA 146
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + + +IAEQEG+++ E I ++ ++R+AI + +A+
Sbjct: 147 IEKRIRYIAEQEGVEVTEDGIEAINYVARGDMRKAINALQAA 188
>gi|239610553|gb|EEQ87540.1| activator 1 38 kDa subunit [Ajellomyces dermatitidis ER-3]
Length = 354
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 154 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTEAE 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I + L+ ++EG L ++IA S NLR+A+ EA N + I W
Sbjct: 214 ICQALQVAEKKEGWAEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 273
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 274 EALISLIADEIMAERSPAR 292
>gi|169774819|ref|XP_001821877.1| replication factor C subunit 5 [Aspergillus oryzae RIB40]
gi|238496571|ref|XP_002379521.1| DNA replication factor C subunit Rfc5, putative [Aspergillus flavus
NRRL3357]
gi|83769740|dbj|BAE59875.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694401|gb|EED50745.1| DNA replication factor C subunit Rfc5, putative [Aspergillus flavus
NRRL3357]
gi|391868800|gb|EIT78009.1| replication factor C, subunit RFC3 [Aspergillus oryzae 3.042]
Length = 352
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ P++ +
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEDQ 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL ++EG L +KIA S NLR+A+ FEA + E I W
Sbjct: 192 ICSVLSAAGKREGWPEAPGLNKKIAKESGRNLRRALLMFEAIYAQSEKVTENTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ A +I+ E+SP +
Sbjct: 252 EVLISITADEILAERSPAR 270
>gi|341582780|ref|YP_004763272.1| replication factor C small subunit [Thermococcus sp. 4557]
gi|340810438|gb|AEK73595.1| replication factor C small subunit [Thermococcus sp. 4557]
Length = 866
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P + ++
Sbjct: 654 IFLDEADALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDED 713
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + +++IAEQEG++L + + I ++ +LR+AI +A+ ++ + V L
Sbjct: 714 IAKRIKYIAEQEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDKKITDENVFLVA 771
>gi|261195362|ref|XP_002624085.1| activator 1 38 kDa subunit [Ajellomyces dermatitidis SLH14081]
gi|239587957|gb|EEQ70600.1| activator 1 38 kDa subunit [Ajellomyces dermatitidis SLH14081]
Length = 354
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 154 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTEAE 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I + L+ ++EG L ++IA S NLR+A+ EA N + I W
Sbjct: 214 ICQALQVAEKKEGWAEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 273
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 274 EALISLIADEIMAERSPAR 292
>gi|348583113|ref|XP_003477319.1| PREDICTED: replication factor C subunit 3-like [Cavia porcellus]
Length = 288
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
I VL + ++EG+ LP QLA++IA+ S NLR+A+ EA R YPF Q I T W
Sbjct: 124 ICHVLSTVCKKEGLSLPSQLAQRIAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDW 183
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A I+ +Q+P++
Sbjct: 184 EVYLRETANAIVSQQTPQR 202
>gi|399217573|emb|CCF74460.1| unnamed protein product [Babesia microti strain RI]
Length = 346
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEI 60
+L +AD LS A +R LE++ +VF ++S++ P +KS C I+L P K+E+
Sbjct: 131 VLHDADFLSEAAQAALRRTLEKHIRNARVFMHVKELSRIMPPLKSRCLCIRLGLPRKEEV 190
Query: 61 VEVLEFIAEQEGI---QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT- 116
V VL I E I Q + L E+I D S NLR++I + E FV+ LT
Sbjct: 191 VAVLRNICTYENISTSQADNALLERICDASDRNLRRSILTLETI--ATNGFVDPMTSLTL 248
Query: 117 GWEDDITNIATKIIEEQS 134
WE I +IA I +Q+
Sbjct: 249 PWERCIKSIAEGIATKQT 266
>gi|327349013|gb|EGE77870.1| activator 1 38 kDa subunit [Ajellomyces dermatitidis ATCC 18188]
Length = 352
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I + L+ ++EG L ++IA S NLR+A+ EA N + I W
Sbjct: 192 ICQALQVAEKKEGWAEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ E+SP +
Sbjct: 252 EALISLIADEIMAERSPAR 270
>gi|223477952|ref|YP_002582171.1| replication factor C small subunit [Thermococcus sp. AM4]
gi|214033178|gb|EEB74006.1| Replication factor C small subunit [Thermococcus sp. AM4]
Length = 870
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P + ++
Sbjct: 654 IFLDEADALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDED 713
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + +++IAEQEG++L + + I ++ +LR+AI +A+ ++ + V L
Sbjct: 714 IAKRIKYIAEQEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDKKITDENVFLVA 771
>gi|296812353|ref|XP_002846514.1| activator 1 38 kDa subunit [Arthroderma otae CBS 113480]
gi|238841770|gb|EEQ31432.1| activator 1 38 kDa subunit [Arthroderma otae CBS 113480]
Length = 336
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y + + + + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNMRLILLANTTANIIAPIRSRTLLVRVAAPSEDD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I + L+ ++EG L +++A S NLR+A+ FEA N + I W
Sbjct: 192 ICQALKLAGKKEGWNDCPGLNKRLAKESGRNLRRALLMFEAVHAQNDKVSDNTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I IA +I+ E+SP +
Sbjct: 252 EALIALIADEIMAERSPAR 270
>gi|344228882|gb|EGV60768.1| hypothetical protein CANTEDRAFT_111192 [Candida tenuis ATCC 10573]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y ++ + S + PIKS ++++ PS +
Sbjct: 139 VIINEADSLTRDAQAALRRTMEKYSANIRLIMISNTTSNIIPPIKSRTLLVRIPAPSVAD 198
Query: 60 IVEVLEFIAEQEGIQL---PHQ--LAEKIADNSKNNLRQAIRSFEASRQMNYPFV-EGQ- 112
I +L +A +E + P Q ++A NS NLR+A+ SFE N +GQ
Sbjct: 199 ITAILADVATKESVHFTADPVQSGFLSQVAANSDQNLRRALLSFETISMSNASVACDGQN 258
Query: 113 -VILTGWEDDITNIATKIIEEQS 134
V+ WE I N+++ I +S
Sbjct: 259 AVVTLDWEVIIKNVSSSIYTNRS 281
>gi|425765328|gb|EKV04028.1| DNA replication factor C subunit Rfc5, putative [Penicillium
digitatum Pd1]
gi|425766809|gb|EKV05406.1| DNA replication factor C subunit Rfc5, putative [Penicillium
digitatum PHI26]
Length = 352
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y L + S + + PI+S ++++ P++ +
Sbjct: 132 VVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEND 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I L ++EG L ++IA S NLR+A+ FE+ N + +I W
Sbjct: 192 ICSALHLAGKKEGWTESEVLNKRIAKESGRNLRRALLMFESIYAQNEKVTDKTMIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E + A +I+ E+SP +
Sbjct: 252 EALVALTADEILAERSPAR 270
>gi|304314452|ref|YP_003849599.1| replication factor C, small subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302587911|gb|ADL58286.1| replication factor C, small subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 317
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + LP +
Sbjct: 103 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFLPLKGRH 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
I+ LE+IAEQEG++ Q + + ++ +LR+AI +++ + E +
Sbjct: 163 IISRLEYIAEQEGLEYEPQALDTVVYFAEGDLRKAINILQSAASLGEKITESSI 216
>gi|157167248|ref|XP_001652243.1| replication factor C, 37-kDa subunit, putative [Aedes aegypti]
gi|94469174|gb|ABF18436.1| replication factor C [Aedes aegypti]
gi|108877369|gb|EAT41594.1| AAEL006788-PA [Aedes aegypti]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ +PI S CT + P +++
Sbjct: 141 VILDEADAMTHAAQAALRRTMEKETKTTRFCLVCNYVSRIIEPITSRCTKFRFKPLGEEK 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
++E L FI EQE + + Q +I D S +LR+AI + ++ ++
Sbjct: 201 VIERLRFICEQENVDVEDQAYREIVDISGGDLRRAITTLQSCHRL 245
>gi|290981375|ref|XP_002673406.1| predicted protein [Naegleria gruberi]
gi|284086989|gb|EFC40662.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ VS+ + PI S C + P
Sbjct: 118 IILDEADSMTVDAQSALRRTMETYSNVTRFCLICNYVSRIIDPITSRCAKFRFKPLEYSL 177
Query: 60 IVEVLEFIAEQEGIQLP-HQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ E L++IA QEGI L ++ + I +S+ +LR+AI + +++ +M
Sbjct: 178 LKERLQYIANQEGITLKDEKVLDTIVGHSEGDLRKAITTLQSASRM 223
>gi|190348623|gb|EDK41109.2| hypothetical protein PGUG_05207 [Meyerozyma guilliermondii ATCC
6260]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C+ S + PIKS ++++ P+ E
Sbjct: 137 VVINEADSLSRDAQAALRRTMEKYSSNIRLIMVCNTTSSIISPIKSRTLLVRIPAPTTAE 196
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPF 108
I VL IA++E ++ + E++A N N+R+A+ FE + +N
Sbjct: 197 IASVLTTIADKETVKFNPGDEETRQKFFEQLATNCNRNMRRALLCFETISMQTETININN 256
Query: 109 VEGQVILTGWEDDITNIATKIIEEQS 134
+ ++ WE I+N+A I +++
Sbjct: 257 PKQAIVDLDWEVIISNLAQSIYTQRT 282
>gi|342184431|emb|CCC93913.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 395
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+ A +R +E+Y ++ CS S+L P++S C I++ S++
Sbjct: 179 VVLNEVDKMGRAAQHALRRTMEKYMSTCRLILICSSTSRLIAPLRSRCLAIRVPSHSREN 238
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ---VIL 115
+ +V++ + E+EG P Q + S+ NLR+A EA+ MN G +
Sbjct: 239 LEKVVKAVCEREGRAPPSQAFLASLTRQSEGNLRRAQLMLEAA-AMNKADFAGSGSDIPQ 297
Query: 116 TGWEDDITNIATKIIEEQSPKQ 137
W+ + IA+ II EQ+P++
Sbjct: 298 ADWQVFLEQIASDIISEQTPRK 319
>gi|154346764|ref|XP_001569319.1| putative replication factor C, subunit 5 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066661|emb|CAM44460.1| putative replication factor C, subunit 5 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 351
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+S A +R +E+Y ++F C+ S+L P++S C I++ SK+
Sbjct: 135 VVLNEVDKMSRSAQHALRRTMEKYMSTCRLFLLCNSTSRLISPLRSRCLGIRVALHSKEN 194
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEAS--RQMNYPFVEGQVILT 116
+ ++ + E EG LP + +A S NLR+ + EAS ++++ +
Sbjct: 195 LKLAVQRVCEGEGRPLPSEAFLHALALRSDGNLRRGLLMLEASAMTRVDWSGNGATIPQA 254
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W+ + I+ I+ EQ+PK+
Sbjct: 255 DWKLFLDEISHDIVAEQTPKR 275
>gi|386002033|ref|YP_005920332.1| replication factor C small subunit [Methanosaeta harundinacea 6Ac]
gi|357210089|gb|AET64709.1| Replication factor C small subunit [Methanosaeta harundinacea 6Ac]
Length = 368
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +ERY + + C+ SK+ +PI+S C V + S++
Sbjct: 150 IFLDEADALTNDAQSALRRTMERYSSICRFVLSCNYSSKIIEPIQSRCAVYRFRSLSEEA 209
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
+ E ++ IAE EG+++ + I ++ ++R+AI + +A+ M E
Sbjct: 210 VSERMKTIAEAEGVKVTPEGMRAIVYVARGDMRKAINALQAASLMEESVTE 260
>gi|300122545|emb|CBK23114.2| unnamed protein product [Blastocystis hominis]
gi|300122911|emb|CBK23918.2| unnamed protein product [Blastocystis hominis]
Length = 354
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD LS +A +R +E+Y ++ CC + S++ PI+S C +++ P+ E
Sbjct: 131 VLLSEADNLSRNAQAGLRRTMEKYSSNCRLILCCENSSRIIAPIRSRCLCLRISAPTLSE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN-YPFVEGQ-VILTG 117
++ +L+ EG+ +P ++IA S NLR+A+ E++ N ++G+ ++L
Sbjct: 191 VLSILQRNCLNEGLSVPSSQLQRIAQASNRNLRRALLLLESNTAANGGGGLKGEDIVLMD 250
Query: 118 WEDDITNIATKIIEEQSP 135
WE + +I I+ +Q+P
Sbjct: 251 WERFLESIVGIIVTKQNP 268
>gi|170030843|ref|XP_001843297.1| replication factor C subunit 4 [Culex quinquefasciatus]
gi|167868416|gb|EDS31799.1| replication factor C subunit 4 [Culex quinquefasciatus]
Length = 355
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ +PI S CT + P +++
Sbjct: 138 VILDEADAMTHAAQAALRRTMEKETKTTRFCLVCNYVSRIIEPITSRCTKFRFKPLRQEK 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I+E L FI +QE +++ Q + I D S +LR+AI + ++ ++
Sbjct: 198 IIERLRFICDQETVEVEDQAYQDIVDISGGDLRRAITTLQSCHRLK 243
>gi|325093236|gb|EGC46546.1| activator 1 subunit 5 [Ajellomyces capsulatus H88]
Length = 352
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS+ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSEAE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++E L ++IA S NLR+A+ EA N + I W
Sbjct: 192 ICQVLKLAVKKESWTEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ ++SP +
Sbjct: 252 EALISLIADEIMADRSPGR 270
>gi|240275872|gb|EER39385.1| activator 1 38 kDa subunit [Ajellomyces capsulatus H143]
Length = 325
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS+ E
Sbjct: 52 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPSEAE 111
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I +VL+ ++E L ++IA S NLR+A+ EA N + I W
Sbjct: 112 ICQVLKLAVKKESWTEAPGLNKRIAKESGRNLRRALLMLEAIYAQNEKVTDDTPIPPPDW 171
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ IA +I+ ++SP +
Sbjct: 172 EALISLIADEIMADRSPGR 190
>gi|118783134|ref|XP_312782.3| AGAP003093-PA [Anopheles gambiae str. PEST]
gi|116129067|gb|EAA08477.3| AGAP003093-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ +PI S CT + P +++
Sbjct: 144 VILDEADAMTHAAQAALRRTMEKETKTTRFCLVCNYVSRIIEPITSRCTKFRFKPLGEEK 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I+E L +I +QEG+ + + + I D S +LR+AI + ++ ++
Sbjct: 204 IIERLRYICDQEGVTVDDGVYKDIVDISGGDLRRAITTLQSCHRL 248
>gi|448079909|ref|XP_004194496.1| Piso0_004995 [Millerozyma farinosa CBS 7064]
gi|359375918|emb|CCE86500.1| Piso0_004995 [Millerozyma farinosa CBS 7064]
Length = 363
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ + S + PIKS ++++ PS+ +
Sbjct: 138 VIINEADSLSKDAQAALRRTMEKYSANIRLILVSNTTSGIIAPIKSRTLLVRVPAPSETD 197
Query: 60 IVEVLEFIAEQEGIQL-------PHQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPF 108
I ++L IA++EG++ +L IA +S+ NLR+ + FE S +N
Sbjct: 198 IADILSGIAKKEGLKFKPDTDNAKQELFRNIALHSEKNLRRTLLCFETLSMQSETINIDK 257
Query: 109 VEGQVILTGWEDDITNIATKIIEEQS 134
++ WE I N+A I+ +S
Sbjct: 258 NTLSLVSIDWEVIIANLAKSIVANKS 283
>gi|240104119|ref|YP_002960428.1| Replication factor C, small subunit (rfcS) [Thermococcus
gammatolerans EJ3]
gi|239911673|gb|ACS34564.1| Replication factor C, small subunit (rfcS) [Thermococcus
gammatolerans EJ3]
Length = 333
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P + ++
Sbjct: 117 IFLDEADALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDED 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + + +IAEQEG++L + + I ++ +LR+AI +A+ ++ + V L
Sbjct: 177 IAKRIRYIAEQEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDKKITDENVFLVA 234
>gi|255946333|ref|XP_002563934.1| Pc20g14580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588669|emb|CAP86787.1| Pc20g14580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 352
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P++ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTESD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I L ++EG L ++IA S NLR+A+ FE+ N + I W
Sbjct: 192 ICSALHLAGKKEGWTESEVLNKRIAKESGRNLRRALLMFESIYAQNEKVTDKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E +T A +I+ E+SP +
Sbjct: 252 EALVTLTADEILAERSPAR 270
>gi|378756642|gb|EHY66666.1| replication factor C subunit 2 [Nematocida sp. 1 ERTm2]
Length = 228
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQE 59
++L E+D ++ A MR LLER++ K F C+D+SK+ I+S C +++L P S +E
Sbjct: 104 LVLDESDSMTMQAQQSMRRLLERHESA-KFIFICNDISKISDTIQSRCAILRLSPLSYEE 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
I ++L E+EG+ + + IA+ S + RQA+
Sbjct: 163 ISQILRKTIEKEGMTVCDKSIATIAETSDGDARQAL 198
>gi|164656026|ref|XP_001729141.1| hypothetical protein MGL_3608 [Malassezia globosa CBS 7966]
gi|159103031|gb|EDP41927.1| hypothetical protein MGL_3608 [Malassezia globosa CBS 7966]
Length = 247
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C + S++ PI+S C ++++ PS ++
Sbjct: 40 VVINEADSLSRDAQAALRRTMEKYMRNMRMILCANSTSRIIAPIRSRCLLLRVGAPSDED 99
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--G 117
+ VL +A++E QLP +++ +I NS + +R P G V +
Sbjct: 100 MSRVLRHVAKREKFQLPDRISSEI--NSCHRIR--------------PDFSGPVSIAQPD 143
Query: 118 WEDDITNIATKIIEEQSPKQ 137
W+ A I+ EQ+P +
Sbjct: 144 WQMYCERTADMIVSEQTPAR 163
>gi|149248680|ref|XP_001528727.1| activator 1 40 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
gi|146448681|gb|EDK43069.1| activator 1 40 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
Length = 362
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ C+ +S + PIKS ++++ PS E
Sbjct: 136 VIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIKSRTLLVRIPSPSVAE 195
Query: 60 IVEVLEFIAEQEGIQLPHQ-------LAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ 112
I +L +A++E ++ E++A S NLR+A+ +FE N Q
Sbjct: 196 ISLILHDVAQEEKVKFSSTDQQALTGFYEQVATVSNRNLRRALLAFETICMQNETINVKQ 255
Query: 113 ---VILTGWEDDITNIATKI 129
VI+ WE I N+A I
Sbjct: 256 MHSVIVLDWELIIRNMAKSI 275
>gi|242809831|ref|XP_002485455.1| DNA replication factor C subunit Rfc5, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716080|gb|EED15502.1| DNA replication factor C subunit Rfc5, putative [Talaromyces
stipitatus ATCC 10500]
Length = 352
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ PS+ +
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPSELD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
I VL A++E L +IA S NLR+A+ FEA N + I W
Sbjct: 192 ICAVLRSAAQKENWTQSDALNVRIARESGRNLRRALLMFEAIYAQNEKVSDKTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQSPKQ 137
E I+ +A +I+ E+SP +
Sbjct: 252 EALISVVADEILAERSPAR 270
>gi|255715673|ref|XP_002554118.1| KLTH0E14696p [Lachancea thermotolerans]
gi|238935500|emb|CAR23681.1| KLTH0E14696p [Lachancea thermotolerans CBS 6340]
Length = 384
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EAD L+ DA +R +E+Y + + + C S S + PIKS C +++ P+ QE
Sbjct: 168 VIINEADSLTRDAQAALRRTMEKYSRNIRFIMLCESMSSMIAPIKSRCLLVRTPAPTTQE 227
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL--T 116
+ L + QE + + + + IA++ NLR+A+ +FE+ N ++ L
Sbjct: 228 TADALVKVGGQEKVTVEDEAILNTIAESCDGNLRKALLTFESMALNNEMCLKSSTALIRA 287
Query: 117 GWEDDITNIATKIIEEQS 134
W I +A +I++++S
Sbjct: 288 DWVVVILKMANRILKDRS 305
>gi|388583076|gb|EIM23379.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 331
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + C+ V+++ +P+ S C+ + P + +
Sbjct: 114 IILDEADSMTQDAQSALRRTMETYSKSTRFCLVCNYVTRIIEPVASRCSKFRFKPLDESD 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
LE+IA++E I L + + + DN+ +LRQAI +++ +++ +
Sbjct: 174 SKARLEYIAQEENIPLNEGVIDALIDNTHGDLRQAITYLQSAARLHQASNSAITV----- 228
Query: 120 DDITNIATKIIE 131
D IT IA I E
Sbjct: 229 DTITEIAGTIPE 240
>gi|294938321|ref|XP_002782103.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
gi|239893514|gb|EER13898.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
Length = 361
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ +A LS A +R +E+Y G+ KVFF ++ L P++S C I++ P+ +
Sbjct: 135 VVVNDAHNLSRSAQAGLRRTMEKYVGVLKVFFHADSLASLIPPLRSRCMSIRVPRPTTEV 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE----------ASRQMNYPFV 109
+ LE + + G+++ LA IA S+ +LR + + A R N P
Sbjct: 195 VKVELERVEAKMGVEMNPHLATIIATESRGDLRYGLMQLDAISAQNGGSHALRNANTPLA 254
Query: 110 EGQVILTGWEDDITNIATKIIEEQSPKQ 137
W+ + +I I+ EQ+PKQ
Sbjct: 255 R-----LPWKVVVEDIVEDILTEQTPKQ 277
>gi|71747956|ref|XP_823033.1| replication factor C subunit 5 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832701|gb|EAN78205.1| replication factor C, subunit 5, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261332892|emb|CBH15887.1| ATPase, putative [Trypanosoma brucei gambiense DAL972]
Length = 349
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+ A +R +E+Y ++ C+ S+L P++S C +++ S++
Sbjct: 133 VVLNEVDKMGRAAQHALRRTMEKYMATCRLVLICNSTSRLIAPLRSRCLAVRVPSHSQEN 192
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEAS--RQMNYPFVEGQVILT 116
I +V+ + E+EG P +++ S+ NLR+A EA+ ++++ +
Sbjct: 193 ITKVIRTVCEKEGRMPPSPAFLAALSNQSEGNLRRAQLMLEAAAMTKVDFSGSGANIPQA 252
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W+ + IA I+ EQ+PK+
Sbjct: 253 DWQVFLEEIANDILTEQTPKK 273
>gi|410082151|ref|XP_003958654.1| hypothetical protein KAFR_0H01090 [Kazachstania africana CBS 2517]
gi|372465243|emb|CCF59519.1| hypothetical protein KAFR_0H01090 [Kazachstania africana CBS 2517]
Length = 360
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ LS DA +R +E+Y K + + C S S + PIKS C +I+ P+ E
Sbjct: 138 VIINEANSLSRDAQAALRRTMEKYSKNIRLIMLCDSMSSIIAPIKSRCLLIRCPAPANDE 197
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQA---IRSFEASRQMNYPFVEGQVIL 115
+V +L I +E +QL + IA + NLR A + S S +M +I
Sbjct: 198 LVSILSRIVTEENVQLESGVILNNIAKEANGNLRVATLMLESMALSNEMQLK-TSTTIIK 256
Query: 116 TGWEDDITNIATKIIEEQS 134
W +T++A KI E++
Sbjct: 257 PDWIVVVTSMANKIQRERT 275
>gi|156938086|ref|YP_001435882.1| replication factor C small subunit [Ignicoccus hospitalis KIN4/I]
gi|156567070|gb|ABU82475.1| replication factor C small subunit [Ignicoccus hospitalis KIN4/I]
Length = 329
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R L+E Y + + SK+ +P++S C + P K +
Sbjct: 108 VILDEADNMTADAQQALRRLMEMYSTTTRFILLANFPSKIIEPVQSRCVYFRFRPLPKDK 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++E L++I ++EG+Q E+I + S+ ++R+AI +A+ +
Sbjct: 168 VIERLKYICQKEGVQCEEDALEEIYNISEGDMRKAINILQAAAALG 213
>gi|71666770|ref|XP_820341.1| replication factor C, subunit 5 [Trypanosoma cruzi strain CL
Brener]
gi|70885681|gb|EAN98490.1| replication factor C, subunit 5, putative [Trypanosoma cruzi]
gi|407849659|gb|EKG04335.1| replication factor C, subunit 5, putative [Trypanosoma cruzi]
Length = 349
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+ A +R +E+Y ++ C+ S+L P++S C +++ SK+
Sbjct: 133 VLLNEVDKMGRAAQHALRRTMEKYMSTCRLVLICNSTSRLIAPLRSRCLAVRVPSHSKEN 192
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEASRQMNYPFV--EGQVILT 116
+ +V+ + E+E LP + + S+ NLR+A+ EA+ F +
Sbjct: 193 LTKVIRGVCERENRPLPSPEFMATVTQRSEGNLRRALLMVEAAAMTKVDFSGNGADIPQP 252
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W + IA I+ EQ+PK+
Sbjct: 253 DWRVFLDEIANDILSEQTPKK 273
>gi|340057395|emb|CCC51740.1| putative ATPase [Trypanosoma vivax Y486]
Length = 349
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+ A +R +E+Y ++ C+ S+L P++S C +++ S++
Sbjct: 133 VVLNEVDKMGRAAQHALRRTMEKYVATCRLILICNSTSRLIAPLRSRCLAVRVPSHSQEN 192
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQA--IRSFEASRQMNYPFVEGQVILT 116
I +V++ + E+EG +P + S NLR+A I A+ ++ + +
Sbjct: 193 ITKVIQTVCEKEGRPMPSPAFLATVTQRSDGNLRRAQLILEAAAATKVEFSGSGADIPQP 252
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W +T IA I+ EQ+PK+
Sbjct: 253 DWCVFLTEIAHDILTEQTPKK 273
>gi|339899439|ref|XP_003392854.1| putative replication factor C, subunit 5 [Leishmania infantum
JPCM5]
gi|398025304|ref|XP_003865813.1| replication factor C, subunit 5, putative [Leishmania donovani]
gi|321398829|emb|CBZ09063.1| putative replication factor C, subunit 5 [Leishmania infantum
JPCM5]
gi|322504050|emb|CBZ39137.1| replication factor C, subunit 5, putative [Leishmania donovani]
Length = 351
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+S A +R +E+Y ++F C+ S+L P++S C I++ SK
Sbjct: 135 VVLNEVDKMSRSAQHALRRTMEKYMNTCRLFLLCNSTSRLIPPLRSRCLGIRVASHSKDN 194
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEAS--RQMNYPFVEGQVILT 116
+ ++ + E EG LP +A S NLR+ + EAS ++++ +
Sbjct: 195 LKLAVQRVCEGEGRPLPSAAFLNSLALRSGGNLRRGLLMLEASAMAKVDWSGNGAAIPQA 254
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W+ + I+ I+ EQ+PK+
Sbjct: 255 DWKLFLDEISHDIVAEQTPKK 275
>gi|410079477|ref|XP_003957319.1| hypothetical protein KAFR_0E00300 [Kazachstania africana CBS 2517]
gi|372463905|emb|CCF58184.1| hypothetical protein KAFR_0E00300 [Kazachstania africana CBS 2517]
Length = 350
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ ++++ P+ S C+ +
Sbjct: 135 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYITRIIDPLASRCSKFRFKSLEATN 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNYPFVEGQVILTGW 118
++ L++I+E+E +Q EKI + S+ +LR+AI + AS++++Y VE IL
Sbjct: 195 ALDRLKYISEKESVQYEEGTLEKILEISQGDLRRAITLLQSASKRISYLKVEKIRILQ-V 253
Query: 119 EDDITNIATKIIEEQSPK 136
E+ + TKI+ E + K
Sbjct: 254 EELAGVVPTKILHEIAEK 271
>gi|401421084|ref|XP_003875031.1| putative replication factor C, subunit 5 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491267|emb|CBZ26533.1| putative replication factor C, subunit 5 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 351
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+S A +R +E+Y ++F C+ S+L P++S C I++ SK
Sbjct: 135 VVLNEVDKMSRSAQHALRRTMEKYMNTCRLFLLCNSTSRLIPPLRSRCLGIRVASHSKDN 194
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEAS--RQMNYPFVEGQVILT 116
+ ++ + E EG LP +A S NLR+ + EAS ++++ +
Sbjct: 195 LKLAVQRVCEGEGRPLPSAAFLNSLALRSDGNLRRGLLMLEASAMAKVDWSSNGAAIPQA 254
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W+ + I+ I+ EQ+PK+
Sbjct: 255 DWKLFLDEISHDIVAEQTPKR 275
>gi|315230688|ref|YP_004071124.1| replication factor C small subunit [Thermococcus barophilus MP]
gi|315183716|gb|ADT83901.1| replication factor C small subunit [Thermococcus barophilus MP]
Length = 326
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R ++E + + C+ SK+ +PI+S C + + P ++
Sbjct: 114 IFLDEADALTQDAQQALRRMMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLKDED 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + + FIAE EG++L + + + ++ +LR+AI +A+ ++ + V L
Sbjct: 174 IAKRIRFIAENEGLELTEEGLQALLYIAEGDLRRAINVLQAAAALDTKITDENVFLVA 231
>gi|308160432|gb|EFO62923.1| Replication factor C, subunit 4 [Giardia lamblia P15]
Length = 322
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L E D ++ A +R +++ G + C+++SK ++P++S C V++++PP++ E
Sbjct: 106 VFLDECDAMTEAAQQVLRRIMDDETGSTRFCLACNNISKVIEPVQSRCCVLRIMPPTQAE 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+V+ L+ I E+EG++ + +++ S N++R + S + N + + + G +
Sbjct: 166 LVKYLQEICEKEGVKNDTEALKELISISGNDVRSCLNSLQLVADAN----DKVITVAGVQ 221
Query: 120 DDITNIATKIIEE 132
++ I K+I++
Sbjct: 222 KALSTIDVKVIDQ 234
>gi|303315063|ref|XP_003067539.1| Activator 1 38 kDa subunit, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107209|gb|EER25394.1| Activator 1 38 kDa subunit, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 344
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + + PI+S ++++ P+ +E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLVRVAAPTAEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I +VL+ ++EG L ++IA S NLR+A+ + + P + WE
Sbjct: 192 ICQVLKLSGKREGWSEAPGLNKRIAKESGRNLRRALLIEKVTDDTVVPPPD-------WE 244
Query: 120 DDITNIATKIIEEQSPKQ 137
I+ IA +I+ E+SP +
Sbjct: 245 ALISLIADEIMAERSPAR 262
>gi|242398094|ref|YP_002993518.1| Replication factor C small subunit [Thermococcus sibiricus MM 739]
gi|242264487|gb|ACS89169.1| Replication factor C small subunit [Thermococcus sibiricus MM 739]
Length = 766
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 553 IFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLKDED 612
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+ L++IAE EG++L + + I ++ +LR+AI +A+ ++ + V L
Sbjct: 613 VARRLKYIAENEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDTRITDENVFLVA 670
>gi|169609148|ref|XP_001797993.1| hypothetical protein SNOG_07660 [Phaeosphaeria nodorum SN15]
gi|160701791|gb|EAT85126.2| hypothetical protein SNOG_07660 [Phaeosphaeria nodorum SN15]
Length = 216
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 21 LERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQL 79
+E+Y L + S + + PI+S ++++ P++ EI VL+ + ++EG + L
Sbjct: 1 MEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTETEICSVLKNVGKKEGWKEVESL 60
Query: 80 AEKIADNSKNNLRQAIRSFEASRQMNYPF-------VEGQVILT--------GWEDDITN 124
++IA +S NLR+A+ FEA Y F EG +T WE I
Sbjct: 61 NQRIAKDSGRNLRKALLMFEAVHAQKYVFSIRRHGCCEGTEKITDATHIPPPDWEALIEQ 120
Query: 125 IATKIIEEQSPKQ 137
IA +I+EE+SP++
Sbjct: 121 IARQIVEERSPQR 133
>gi|157877944|ref|XP_001687264.1| putative replication factor C, subunit 5 [Leishmania major strain
Friedlin]
gi|68130339|emb|CAJ09651.1| putative replication factor C, subunit 5 [Leishmania major strain
Friedlin]
Length = 351
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+S A +R +E+Y ++F C+ S+L P++S C I++ SK
Sbjct: 135 VVLNEVDKMSRTAQHALRRTMEKYMNTCRLFLLCNSTSRLIPPLRSRCLGIRVASHSKDN 194
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEAS--RQMNYPFVEGQVILT 116
+ ++ + E EG LP +A S NLR+ + EAS ++++ +
Sbjct: 195 LKLAVQRVCEGEGRPLPSVAFLNSLALRSDGNLRRGLLMLEASALAKVDWSGNGAAIPQA 254
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W+ + I+ I+ EQ+PK+
Sbjct: 255 DWKLFLDEISHDIVAEQTPKR 275
>gi|403221343|dbj|BAM39476.1| replication factor C subunit [Theileria orientalis strain Shintoku]
Length = 336
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y G+++ C+ + K+ PI S C+V P
Sbjct: 120 IILDEADMITADAQAALRRVIENYSGISRFILICNYLHKIIGPIYSRCSVFHFKPIDTSS 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
V+ LE+I +EGI+ + E + S ++R+ I +++ + E V
Sbjct: 180 QVKRLEYICSKEGIKYDTKALEFLTKVSSGDMRKGITILQSTASLYNEITENAV 233
>gi|15920690|ref|NP_376359.1| replication factor C small subunit [Sulfolobus tokodaii str. 7]
gi|42559516|sp|Q975D3.1|RFCS_SULTO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|342306208|dbj|BAK54297.1| replication factor C small subunit [Sulfolobus tokodaii str. 7]
Length = 327
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ +PI+S + + P K++
Sbjct: 108 VLLDEADNMTADAQQALRRTMELYTETTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L +IA+ E ++ + E I D ++ ++R+AI +AS
Sbjct: 168 VVARLAYIAKNEKVEYDQKALETIYDITQGDMRKAINILQAS 209
>gi|294866376|ref|XP_002764685.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
gi|239864375|gb|EEQ97402.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
Length = 287
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ +A LS A +R +E+Y G+ K+FF ++ L P++S C I++ P+ +
Sbjct: 132 VVVNDAHNLSRSAQAGLRRTMEKYVGVLKIFFHADSLASLIPPLRSRCMSIRVPRPTTEV 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS----------RQMNYPFV 109
+ LE + + G+++ LA IA S+ +LR + +A R N P
Sbjct: 192 VKIELERVKAKMGVEMNPHLATIIATESRGDLRYGLMQLDAISAQNGGSHALRNANTPLA 251
Query: 110 EGQVILTGWEDDITNIATKIIEEQSPKQ 137
W+ + +I I+ EQ+PKQ
Sbjct: 252 R-----LPWKVVLEDIVKDILTEQTPKQ 274
>gi|50286125|ref|XP_445491.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524796|emb|CAG58402.1| unnamed protein product [Candida glabrata]
Length = 355
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y K + + C S S + PI+S C +I+ P ++
Sbjct: 138 VIINEANSLTRDAQAALRRTMEKYSKNIRLIMLCDSMSSIISPIRSRCLMIRSPAPQMKD 197
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEA---SRQM----NYPFVEG 111
I + L+ +A +E + + Q + +K+A+ S N+R A+ E+ S +M N P
Sbjct: 198 ITKTLKDVASEENVNIVDQVILDKVANESNGNMRLALLMLESMSLSNEMQLKENTP---- 253
Query: 112 QVILTGWEDDITNIATKIIEEQS 134
VI W I +A KI +E+S
Sbjct: 254 -VIKPDWMVVILKLANKIKKERS 275
>gi|302348723|ref|YP_003816361.1| Replication factor C small subunit [Acidilobus saccharovorans
345-15]
gi|302329135|gb|ADL19330.1| Replication factor C small subunit [Acidilobus saccharovorans
345-15]
Length = 329
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK+ PI+S C + P K +
Sbjct: 109 VLLDEADNMTADAQQALRRLMELYSANTRFILAANFPSKIIDPIQSRCAFFRFTPLGKDD 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+V L +IAE+E ++ E I D S+ ++R+AI
Sbjct: 169 VVGRLRYIAEKENVKYDEDALEAIYDISEGDMRKAI 204
>gi|432328759|ref|YP_007246903.1| DNA polymerase III, gamma/tau subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135468|gb|AGB04737.1| DNA polymerase III, gamma/tau subunit [Aciduliprofundum sp.
MAR08-339]
Length = 320
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + C+ SK+ +PI+S C V + P ++
Sbjct: 104 IFLDEADALTPDAQAALRRTMEMYSRTCRFILSCNYSSKIIEPIQSRCAVFRFTPLKAED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
I + L +IAE EG ++ + I S ++R+AI + S ++ EG V
Sbjct: 164 IKKRLRYIAENEGKEITDDALDAIVYISSGDMRKAINILQMSAAISDTIDEGTV 217
>gi|448417391|ref|ZP_21579327.1| replication factor C small subunit [Halosarcina pallida JCM 14848]
gi|445677879|gb|ELZ30375.1| replication factor C small subunit [Halosarcina pallida JCM 14848]
Length = 329
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 114 IFLDEADSLTSDAQSALRRTMEQFSDNTRFVLSCNYSSKIIDPIQSRCAVFRFSPLGDDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + +E IAE EGI+L + + + ++R+AI S +A+
Sbjct: 174 VRKQVEAIAETEGIELTEDGLDALVYAAGGDMRRAINSLQAA 215
>gi|322368069|ref|ZP_08042638.1| replication factor C small subunit [Haladaptatus paucihalophilus
DX253]
gi|320552085|gb|EFW93730.1| replication factor C small subunit [Haladaptatus paucihalophilus
DX253]
Length = 325
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 114 IFLDEADSLTSDAQAALRRTMEQFSDKTRFIMSCNYSSKIIDPIQSRCAVFRFGPIPDDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ ++++A++EGI+ E + + ++R+AI + +A+ M
Sbjct: 174 VAGYVQYVADEEGIETTDDGIEALVYAADGDMRKAINALQAAAVMG 219
>gi|399575998|ref|ZP_10769755.1| replication factor c small subunit [Halogranum salarium B-1]
gi|399238709|gb|EJN59636.1| replication factor c small subunit [Halogranum salarium B-1]
Length = 323
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P S
Sbjct: 112 IFLDEADSLTSDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFAPLSDDA 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL---T 116
+ + IA++EGI++ + + + + ++R+AI S +A+ E V L T
Sbjct: 172 VAGQIRKIADREGIEMTDEGLDALVYAADGDMRRAINSLQAAATTGGVVDEEAVYLITST 231
Query: 117 GWEDDITNIATKIIE 131
++I ++ T IE
Sbjct: 232 ARPEEIESMVTAAIE 246
>gi|333911588|ref|YP_004485321.1| replication factor C [Methanotorris igneus Kol 5]
gi|333752177|gb|AEF97256.1| Replication factor C [Methanotorris igneus Kol 5]
Length = 756
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P K++
Sbjct: 543 IFLDESDALTSDAQNALRRTMEKYSDVCRFILSCNYPSKIIPPIQSRCAIFRFSPLKKED 602
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V+ L+ IAE+EG+ L + E I S+ ++R+AI + +
Sbjct: 603 VVKKLKEIAEKEGLTLTPEGIEAIIYVSEGDMRKAINVLQTA 644
>gi|146412432|ref|XP_001482187.1| hypothetical protein PGUG_05207 [Meyerozyma guilliermondii ATCC
6260]
Length = 362
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+++ EAD LS DA +R +E+Y ++ C+ S + PIKS ++++ P+ E
Sbjct: 137 VVINEADSLSRDAQAALRRTMEKYSSNIRLIMVCNTTSSIISPIKSRTLLVRIPAPTTAE 196
Query: 60 IVEVLEFIAEQEGIQLP-------HQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPF 108
I VL IA++E ++ + E++A N N+R+A+ FE + +N
Sbjct: 197 IALVLTTIADKETVKFNPGDEETRQKFFEQLATNCNRNMRRALLCFETILMQTETININN 256
Query: 109 VEGQVILTGWEDDITNIATKIIEEQS 134
+ ++ WE I N+A I +++
Sbjct: 257 PKQAIVDLDWEVIILNLAQSIYTQRT 282
>gi|323304258|gb|EGA58032.1| Rfc2p [Saccharomyces cerevisiae FostersB]
Length = 348
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L FI+EQE ++ + E+I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKRAQY 244
>gi|190409543|gb|EDV12808.1| replication factor C subunit 2 [Saccharomyces cerevisiae RM11-1a]
Length = 353
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L FI+EQE ++ + E+I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKRAQY 244
>gi|301117462|ref|XP_002906459.1| replication factor C subunit 4 [Phytophthora infestans T30-4]
gi|262107808|gb|EEY65860.1| replication factor C subunit 4 [Phytophthora infestans T30-4]
Length = 339
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R ++E Y + + C+ VS++ +P+ S C + P K
Sbjct: 123 IVLDEADSMTGDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRFAPLEKIS 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + FIA +E + + + E + + S +LR+AI ++++Q+
Sbjct: 183 MASRVRFIASEERVDVSDSVLESLLECSTGDLRKAINYLQSAKQL 227
>gi|126459198|ref|YP_001055476.1| replication factor C small subunit [Pyrobaculum calidifontis JCM
11548]
gi|126248919|gb|ABO08010.1| replication factor C small subunit [Pyrobaculum calidifontis JCM
11548]
Length = 324
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS + +PI+S +I+ P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSNIIEPIQSRVVMIRFNPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
++ L FIAE EG+++ E I + ++ ++R+AI + + + ++ E +V
Sbjct: 165 VISRLRFIAENEGVKVSDDALEAIYEFTQGDMRKAINALQVAASVSREVTEEEV 218
>gi|151945136|gb|EDN63387.1| replication factor C subunit 2 [Saccharomyces cerevisiae YJM789]
gi|256273083|gb|EEU08038.1| Rfc2p [Saccharomyces cerevisiae JAY291]
gi|259147531|emb|CAY80782.1| Rfc2p [Saccharomyces cerevisiae EC1118]
gi|323336956|gb|EGA78213.1| Rfc2p [Saccharomyces cerevisiae Vin13]
gi|323347871|gb|EGA82132.1| Rfc2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579253|dbj|GAA24416.1| K7_Rfc2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764724|gb|EHN06245.1| Rfc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 353
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L FI+EQE ++ + E+I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKRAQY 244
>gi|374635888|ref|ZP_09707477.1| transcriptional regulator, XRE family [Methanotorris formicicus
Mc-S-70]
gi|373560850|gb|EHP87100.1| transcriptional regulator, XRE family [Methanotorris formicicus
Mc-S-70]
Length = 1300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P K++
Sbjct: 1088 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKKED 1147
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V+ L+ IAE+EG+ L + E I S+ ++R+AI + +
Sbjct: 1148 VVKKLKEIAEKEGLTLTPEGLEAIIYVSEGDMRKAINVLQTA 1189
>gi|119719185|ref|YP_919680.1| replication factor C small subunit [Thermofilum pendens Hrk 5]
gi|150415673|sp|A1RWU7.1|RFCS_THEPD RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|119524305|gb|ABL77677.1| replication factor C small subunit [Thermofilum pendens Hrk 5]
Length = 325
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E + + + SK+ +PI+S C V + P K +
Sbjct: 105 VILDEADNMTGDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRFQPLPKGD 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
+ L +IA+QEGI + E I + S+ +LR+AI + +A+ ++ E
Sbjct: 165 AFQRLRWIAQQEGITVDDGALEAIWEESQGDLRKAINTLQAASAISRNVTE 215
>gi|171689292|ref|XP_001909586.1| hypothetical protein [Podospora anserina S mat+]
gi|170944608|emb|CAP70719.1| unnamed protein product [Podospora anserina S mat+]
Length = 352
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYK-GLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y L + S + PI+S C ++++ P+ E
Sbjct: 132 VVINEADHLTRDAQAALRRTMEKYSPNLRLILVGESTAGIIAPIRSRCLLVRVARPTVGE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LTGW 118
+ VL E+EG ++ L ++A S NLR+A+ E N + I W
Sbjct: 192 VEGVLRGSCEREGWEVREGLVGRVARESGRNLRRALLMLEGVYAQNEKVTDDTPIPPPDW 251
Query: 119 EDDITNIATKIIEEQS 134
E I IA +I+ E +
Sbjct: 252 EGLIEQIAQEIMAEHT 267
>gi|300709601|ref|YP_003735415.1| replication factor C small subunit [Halalkalicoccus jeotgali B3]
gi|448297629|ref|ZP_21487674.1| replication factor C small subunit [Halalkalicoccus jeotgali B3]
gi|299123284|gb|ADJ13623.1| replication factor C small subunit [Halalkalicoccus jeotgali B3]
gi|445578957|gb|ELY33355.1| replication factor C small subunit [Halalkalicoccus jeotgali B3]
Length = 329
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P S
Sbjct: 116 IFLDEADSLTSDAQSALRRTMEQFSSNTRFILSCNYSSKIIDPIQSRCAVFRFSPISDAA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
+ E + IA EGI++ E + + ++R+A+ S +A+ M V+ +V+ T
Sbjct: 176 VGERIREIAHIEGIEITDGGVEALVYAADGDMRRAVNSLQAAAVMG-ETVDEEVVYT 231
>gi|387594488|gb|EIJ89512.1| replication factor C subunit 2 [Nematocida parisii ERTm3]
gi|387596671|gb|EIJ94292.1| replication factor C subunit 2 [Nematocida parisii ERTm1]
Length = 306
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQE 59
+IL E+D ++T A MR LLE+Y+ K F C+DVSK+ I+S C +++L S +
Sbjct: 104 LILDESDSMTTQAQQSMRRLLEKYES-AKFIFICNDVSKISDTIQSRCAILRLSALSTAD 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E++ AE+E + + IA+ S+ + RQ +
Sbjct: 163 VSEIITRTAEKENLTISDSAISIIAETSEGDARQGL 198
>gi|57642153|ref|YP_184631.1| replication factor C small subunit [Thermococcus kodakarensis KOD1]
gi|62287362|sp|Q5JHP2.1|RFCS_PYRKO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
Contains: RecName: Full=Pko RFC intein
gi|57160477|dbj|BAD86407.1| replication factor C, small subunit [Thermococcus kodakarensis
KOD1]
Length = 866
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 654 IFLDEADALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 713
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + + +IAE EG++L + + I ++ +LR+AI +A+ ++ + V L
Sbjct: 714 IAKRIRYIAENEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDTKITDENVFLVA 771
>gi|374724905|gb|EHR76985.1| replication factor C small subunit [uncultured marine group II
euryarchaeote]
Length = 328
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R ++E+Y + C+ SK+ +PI+S C V + P S +
Sbjct: 115 IFLDEADALTNDAQGALRRIMEQYAETCRFILSCNYSSKIIEPIQSRCAVFRFRPLSDAD 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ + +AE EG++L + + S+ +LR+A+ + + +N
Sbjct: 175 VNAQIHHVAEIEGVKLEDDAGDALTRISQGDLRKALTGLQVASAIN 220
>gi|302830262|ref|XP_002946697.1| DNA replication factor C complex subunit 4 [Volvox carteri f.
nagariensis]
gi|300267741|gb|EFJ51923.1| DNA replication factor C complex subunit 4 [Volvox carteri f.
nagariensis]
Length = 328
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E Y + + F C+ VS++ +P+ S C + P
Sbjct: 112 LILDEADSMTQDAQSALRRTMETYSRVTRFVFICNYVSRIIEPLASRCAKFRFKPLQPTV 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+ +E I E+EG+ L E ++ S +LR+AI + +++ ++ V+ +L
Sbjct: 172 MAGRIEHICEREGVTLAPGALEALSSVSGGDLRRAITTLQSAARLGGGTVDKATLL 227
>gi|389845694|ref|YP_006347933.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|448616684|ref|ZP_21665394.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|388243000|gb|AFK17946.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|445751339|gb|EMA02776.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
Length = 330
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ PI+S C V + P
Sbjct: 118 IFLDEADSLTNDAQSALRRTMEEFSDKTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E IAE EGI+L + + + ++R+AI S +A+
Sbjct: 178 IAEQTRDIAEAEGIELTEGGLDALVYAAGGDMRRAINSLQAA 219
>gi|344229660|gb|EGV61545.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 359
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ ++++ P+ S C+ + P + +
Sbjct: 134 IILDEADSMTNDAQSALRRTMETYSGVTRFCLVCNYITRIIDPLASRCSKFRFKPLNNSD 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ L++IA EGI+ E++ S +LR+AI +++ +++
Sbjct: 194 ALGRLQYIAGHEGIEAEEGTLEEVLKISNGDLRRAITYLQSATRLH 239
>gi|15678269|ref|NP_275384.1| replication factor C small subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|42559322|sp|O26343.1|RFCS_METTH RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
AltName: Full=MthRFC small subunit
gi|2621290|gb|AAB84747.1| replication factor C, small subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 321
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + LP +
Sbjct: 106 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFLPLKGHQ 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
I++ LE+IAE+E ++ E I ++ +LR+AI +++ + E +
Sbjct: 166 IIKRLEYIAEKENLEYEAHALETIVYFAEGDLRKAINLLQSAASLGEKITESSI 219
>gi|296109834|ref|YP_003616783.1| Replication factor C [methanocaldococcus infernus ME]
gi|295434648|gb|ADG13819.1| Replication factor C [Methanocaldococcus infernus ME]
Length = 749
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L+ DA +R +E+Y + + C+ SK+ PI+S C + + P K++
Sbjct: 535 IFLDESDALTADAQNALRRTMEKYSNVCRFILSCNYPSKIIPPIQSRCAIFRFSPLKKED 594
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
I + L+ IAE+EG++L E I S+ +LR+AI
Sbjct: 595 IAKKLKEIAEKEGLELTPSGLEAIIYVSEGDLRKAI 630
>gi|398365131|ref|NP_012602.3| Rfc2p [Saccharomyces cerevisiae S288c]
gi|730502|sp|P40348.1|RFC2_YEAST RecName: Full=Replication factor C subunit 2; Short=Replication
factor C2; AltName: Full=Activator 1 41 kDa subunit
gi|498463|dbj|BAA05858.1| Rfc2 protein [Saccharomyces cerevisiae]
gi|841464|gb|AAC49061.1| Rfc2p [Saccharomyces cerevisiae]
gi|1015747|emb|CAA89596.1| RFC2 [Saccharomyces cerevisiae]
gi|1019690|gb|AAB39294.1| ORF YJR068w [Saccharomyces cerevisiae]
gi|285812957|tpg|DAA08855.1| TPA: Rfc2p [Saccharomyces cerevisiae S288c]
gi|392298494|gb|EIW09591.1| Rfc2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 353
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
++ L FI+EQE ++ + E+I D S +LR+ I +++ + +G+ I +
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253
>gi|45269731|gb|AAS56246.1| YJR068W [Saccharomyces cerevisiae]
Length = 353
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
++ L FI+EQE ++ + E+I D S +LR+ I +++ + +G+ I +
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253
>gi|325958394|ref|YP_004289860.1| replication factor C small subunit [Methanobacterium sp. AL-21]
gi|325329826|gb|ADZ08888.1| Replication factor C small subunit [Methanobacterium sp. AL-21]
Length = 347
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + +P +
Sbjct: 129 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFVPVKGHQ 188
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I++ LE+IA+ EG+++ E I ++ ++R+A+ +AS
Sbjct: 189 IIKRLEYIAQAEGLKIDIAAIESIVYFAEGDMRRAVNILQAS 230
>gi|288931716|ref|YP_003435776.1| Replication factor C [Ferroglobus placidus DSM 10642]
gi|288893964|gb|ADC65501.1| Replication factor C [Ferroglobus placidus DSM 10642]
Length = 321
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + + C+ VS++ +PI+S C V + P K+
Sbjct: 105 IFLDEADALTADAQAALRRTMEMYSKVCRFILSCNYVSRIIEPIQSRCAVFKFKPVPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ + L+ IAE EG+++ + E + S + R+AI + + + ++
Sbjct: 165 MKKRLKEIAENEGLEIDDEALEVLIYISGGDFRKAINALQGAAALD 210
>gi|294496335|ref|YP_003542828.1| replication factor C small subunit [Methanohalophilus mahii DSM
5219]
gi|292667334|gb|ADE37183.1| replication factor C small subunit [Methanohalophilus mahii DSM
5219]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +ERY + C+ SK+ +PI+S C V + P S
Sbjct: 105 IFLDEADALTPDAQSALRRTMERYTNNCRFILSCNYSSKIIEPIQSRCAVYRFRPLSDDA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IAE+EG+ + E I ++ ++R+AI + +A+ +
Sbjct: 165 IGKRCRHIAEKEGLDIADDGIEAIKYVAEGDMRKAINAVQAASMFD 210
>gi|337285093|ref|YP_004624567.1| Replication factor C, small subunit (rfcS) [Pyrococcus yayanosii
CH1]
gi|334901027|gb|AEH25295.1| Replication factor C, small subunit (rfcS) [Pyrococcus yayanosii
CH1]
Length = 326
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK--LQPIKSLCTVIQLLPPSKQ 58
I L EAD L+ DA +R +E + N F ++ S ++PI+S C + + P S +
Sbjct: 114 IFLDEADALTQDAQQALRRTMEMFSN-NVRFILSANYSSRIIEPIQSRCAIFRFRPLSDE 172
Query: 59 EIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++ + L++IAEQEG++L + + I ++ +LR+AI +A+ ++
Sbjct: 173 DVAKRLKYIAEQEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALD 219
>gi|50513624|pdb|1SXJ|D Chain D, Crystal Structure Of The Eukaryotic Clamp Loader
(Replication Factor C, Rfc) Bound To The Dna Sliding
Clamp (Proliferating Cell Nuclear Antigen, Pcna)
Length = 353
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
++ L FI+EQE ++ + E+I D S +LR+ I +++ + +G+ I +
Sbjct: 197 AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253
>gi|401837599|gb|EJT41507.1| RFC2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 353
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDSNN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L +I+EQE ++ + E+I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRYISEQENVKCDSGVLERILDISAGDLRRGITLLQSASKKAQY 244
>gi|365759876|gb|EHN01638.1| Rfc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 353
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDSNN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L +I+EQE ++ + E+I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRYISEQENVKCDSGVLERILDISAGDLRRGITLLQSASKKAQY 244
>gi|302813098|ref|XP_002988235.1| hypothetical protein SELMODRAFT_235493 [Selaginella moellendorffii]
gi|302819400|ref|XP_002991370.1| hypothetical protein SELMODRAFT_236274 [Selaginella moellendorffii]
gi|300140763|gb|EFJ07482.1| hypothetical protein SELMODRAFT_236274 [Selaginella moellendorffii]
gi|300143967|gb|EFJ10654.1| hypothetical protein SELMODRAFT_235493 [Selaginella moellendorffii]
Length = 332
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E+Y + C+ VSK+ P ++S CT + P Q
Sbjct: 113 IILDEADAMTKDAQFSLRRIIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFPPLQAQH 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
+ E LEF+ +QE + + I S ++R+A+ + S QM P V
Sbjct: 173 VRERLEFVIDQERLDVTEDGLSAIVRLSNGDMRKALNILQ-STQMAEPHV 221
>gi|365981921|ref|XP_003667794.1| hypothetical protein NDAI_0A03940 [Naumovozyma dairenensis CBS 421]
gi|343766560|emb|CCD22551.1| hypothetical protein NDAI_0A03940 [Naumovozyma dairenensis CBS 421]
Length = 354
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ + P
Sbjct: 139 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKPLDATN 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
+ LE++A +E +Q + + I D S+ +LR+AI + AS+++ Y
Sbjct: 199 SIGRLEYVAREESVQYDDDVMKCILDISEGDLRRAITLLQSASKRILY 246
>gi|159041490|ref|YP_001540742.1| replication factor C [Caldivirga maquilingensis IC-167]
gi|157920325|gb|ABW01752.1| Replication factor C [Caldivirga maquilingensis IC-167]
Length = 348
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S C + + P K+
Sbjct: 108 VILDEADNMTSDAQQALRRIMEMYASTTRFILLANYISGIIEPIQSRCAIFRFNPLPKEA 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++E L IA++ G+++ E I + S+ ++R+AI + + + N
Sbjct: 168 VIERLRQIAKETGVEVTEDGLEAIWEVSQGDMRKAINTLQTTTTTN 213
>gi|448730730|ref|ZP_21713035.1| replication factor C small subunit [Halococcus saccharolyticus DSM
5350]
gi|445793171|gb|EMA43761.1| replication factor C small subunit [Halococcus saccharolyticus DSM
5350]
Length = 325
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +++
Sbjct: 113 IFLDEADALTSDAQSALRRTMEQFANNTRFILSCNYSSQIIDPIQSRCAVFRFGPLAEEA 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ E + +AE EGI++ + + + ++R+A+ +A+ M
Sbjct: 173 VGEYIRRVAENEGIEVTDDGVDALVYAADGDMRKALNGLQAAATM 217
>gi|159041324|ref|YP_001540576.1| ATPase central domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157920159|gb|ABW01586.1| AAA ATPase central domain protein [Caldivirga maquilingensis
IC-167]
Length = 318
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S C + + P K+
Sbjct: 99 VILDEADNMTSDAQQALRRIMEMYASTTRFILLANYISGIIEPIQSRCAIFRFNPLPKEA 158
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++E L IA++ G+++ E I + S+ ++R+AI + + + N
Sbjct: 159 VIERLRQIAKETGVEVTEDGLEAIWEVSQGDMRKAINTLQTTTTTN 204
>gi|256811337|ref|YP_003128706.1| replication factor C small subunit [Methanocaldococcus fervens
AG86]
gi|256794537|gb|ACV25206.1| Replication factor C [Methanocaldococcus fervens AG86]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L+ DA +R +E+Y + + C+ SK+ PI+S C + + P K++
Sbjct: 104 IFLDESDALTPDAQNALRRTMEKYSDVCRFILSCNYPSKIIPPIQSRCAIFRFSPLKKED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + L+ IAE+EG++L E I S+ ++R+AI + + ++
Sbjct: 164 IAKKLKEIAEKEGLKLTESGLEAIIYVSEGDMRKAINVLQTAAALS 209
>gi|146101518|ref|XP_001469135.1| putative replication factor C, subunit 3 [Leishmania infantum
JPCM5]
gi|398023497|ref|XP_003864910.1| replication factor C, subunit 3, putative [Leishmania donovani]
gi|134073504|emb|CAM72235.1| putative replication factor C, subunit 3 [Leishmania infantum
JPCM5]
gi|322503146|emb|CBZ38230.1| replication factor C, subunit 3, putative [Leishmania donovani]
Length = 364
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 135 VILDEADQMSHDAQAALRRVIEKYT--RNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 192
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L F+AEQEG++ S +LR+ + + +AS
Sbjct: 193 SAMMPRLRFVAEQEGVKYTTDGLAAAFRLSHGDLRRCLNTMQAS 236
>gi|407404710|gb|EKF30062.1| replication factor C, subunit 5, putative [Trypanosoma cruzi
marinkellei]
Length = 349
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L E DK+ A +R +E+Y ++ C+ S+L P++S C +++ SK+
Sbjct: 133 VLLNEVDKMGRAAQHALRRTMEKYMSTCRLVLICNSTSRLIAPLRSRCLAVRVPSHSKEN 192
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEASRQMNYPFV--EGQVILT 116
+ +V+ + E E LP + S+ NLR+A+ EA+ F +
Sbjct: 193 LTKVIRRVCELENRPLPSPAFMATVTQRSEGNLRRALLMVEAAAMTKVDFSGNGADIPQP 252
Query: 117 GWEDDITNIATKIIEEQSPKQ 137
W + IA I+ EQ+PK+
Sbjct: 253 DWRVFLDEIANDILSEQTPKK 273
>gi|390346340|ref|XP_003726529.1| PREDICTED: replication factor C subunit 5-like [Strongylocentrotus
purpuratus]
Length = 342
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E++ + F C+ +SK+ P ++S CT + P Q+
Sbjct: 112 VILDEADAMTNDAQNALRRVIEKFTENTRFCFICNYLSKIIPALQSRCTRFRFGPLDNQQ 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TGW 118
IV LEF+ +E + + + + +K ++R+ I +++ + E V L TG
Sbjct: 172 IVPRLEFVVREENVDMTEDGKKALITLAKGDMRRVINILQSTSMAHEKVTEENVYLCTGH 231
Query: 119 --EDDITNIATKIIEE 132
DI NI ++ E
Sbjct: 232 PLRTDIENIVNWMLNE 247
>gi|327311517|ref|YP_004338414.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
gi|326947996|gb|AEA13102.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
Length = 328
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P K+
Sbjct: 107 VILDEADNMTSDAQQALRRIMEMYANTTRFILLANYVSRIIDPIISRCAVFRFPPMPKEL 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ + L +IA+QEGI + + I + S+ ++R+AI
Sbjct: 167 MAKRLAYIAKQEGITVTEDGIDAIYEISQGDMRRAI 202
>gi|323308474|gb|EGA61719.1| Rfc2p [Saccharomyces cerevisiae FostersO]
Length = 353
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L FI+EQE ++ + E I D S +LR+ I + AS++ Y
Sbjct: 197 AIDRLRFISEQENVKCDDGVLEXILDISAGDLRRGITLLQSASKRAQY 244
>gi|366988801|ref|XP_003674168.1| hypothetical protein NCAS_0A12300 [Naumovozyma castellii CBS 4309]
gi|342300031|emb|CCC67788.1| hypothetical protein NCAS_0A12300 [Naumovozyma castellii CBS 4309]
Length = 350
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD +++DA +R +E Y G+ + C+ V++ + P+ S C+ + P
Sbjct: 135 IILDEADSMTSDAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKPLDATN 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNYPFVE 110
++ L ++A +E + + + I D S +LR+AI + A++++ Y E
Sbjct: 195 AIDRLRYVATEESVSYEDDVLKTILDISAGDLRRAITLLQSAAKRIQYTGAE 246
>gi|389851690|ref|YP_006353924.1| replication factor C small subunit [Pyrococcus sp. ST04]
gi|388248996|gb|AFK21849.1| replication factor C small subunit [Pyrococcus sp. ST04]
Length = 867
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 654 IFLDEADALTQDAQQALRRTMEMFSINVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 713
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + L+FIAE EG++L + + I ++ ++R+AI +A+ ++ + V +
Sbjct: 714 IAKRLKFIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVA 771
>gi|255712103|ref|XP_002552334.1| KLTH0C02442p [Lachancea thermotolerans]
gi|238933713|emb|CAR21896.1| KLTH0C02442p [Lachancea thermotolerans CBS 6340]
Length = 356
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + P
Sbjct: 136 IILDEADSMTADAQSALRRTMENYSNVTRFCLICNYVTRIIDPLASRCSKFRFKPLDSSN 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ ++++A++E +Q + EKI D S+ +LR+AI +++ ++
Sbjct: 196 ALSRVQYVAKEERLQYDEHVLEKILDVSQGDLRRAIMLLQSTSKI 240
>gi|374633940|ref|ZP_09706305.1| DNA polymerase III, gamma/tau subunit [Metallosphaera
yellowstonensis MK1]
gi|373523728|gb|EHP68648.1| DNA polymerase III, gamma/tau subunit [Metallosphaera
yellowstonensis MK1]
Length = 326
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ PI+S + + P K++
Sbjct: 106 VLLDEADNMTADAQQALRRTMELYTETTRFILACNYLSKIIDPIQSRTALFRFYPLKKED 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ LEFIA+ E ++ + + I + + ++R+AI +AS
Sbjct: 166 VISRLEFIAKNEKVEYDPKALDTIYEITSGDMRKAINILQAS 207
>gi|300121957|emb|CBK22531.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
II+ EAD L+ DA +R ++E+Y + + F C+ +SK+ P + S C + +
Sbjct: 97 IIMDEADSLTMDAQSALRRVMEQYSRVTRFCFICNYISKIIPALSSRCARFEFGALPRGS 156
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++E L FI +E I++ ++ + I D+S+ +LR I+ + + +N
Sbjct: 157 VLERLSFICGEEKIEIENEALDFIFDHSRGDLRAGIQLLQNAETVN 202
>gi|388505532|gb|AFK40832.1| unknown [Lotus japonicus]
Length = 342
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I +EG+ L + ++ S+ +LR+AI ++S ++
Sbjct: 179 MSSRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARL 223
>gi|448084401|ref|XP_004195594.1| Piso0_004995 [Millerozyma farinosa CBS 7064]
gi|359377016|emb|CCE85399.1| Piso0_004995 [Millerozyma farinosa CBS 7064]
Length = 363
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ + S + PIKS ++++ PS+ +
Sbjct: 138 VIINEADSLSKDAQAALRRTMEKYSANIRLILVSNTTSGIIAPIKSRTLLVRVPAPSETD 197
Query: 60 IVEVLEFIAEQEGIQL-------PHQLAEKIADNSKNNLRQAIRSFEA----SRQMNYPF 108
I ++L I+++EG++ +L IA +++ NLR+ + FE S +N
Sbjct: 198 IADILSGISKKEGLKFKPDTDNAKQELFRNIALHAERNLRRTLLCFETLSMQSDTINIDK 257
Query: 109 VEGQVILTGWEDDITNIATKIIEEQS 134
++ WE I+N+A I +S
Sbjct: 258 NTLSLVSIDWEVIISNLAKSIAANKS 283
>gi|294920987|ref|XP_002778643.1| Replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
gi|239887323|gb|EER10438.1| Replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
Length = 277
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R ++E Y + + C+ VS++ +P++S C + P S +
Sbjct: 133 IVLDEADSMTKDAQAALRRIIENYTQVTRFCIICNYVSRIIEPLQSRCAKFRFEPLSDES 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
LE+IA EG+++ + E + S +LR AI + +
Sbjct: 193 QRGRLEYIANCEGVKMANGAMEALLGTSNGDLRSAINTLQ 232
>gi|18976465|ref|NP_577822.1| replication factor C small subunit [Pyrococcus furiosus DSM 3638]
gi|397652193|ref|YP_006492774.1| replication factor C small subunit [Pyrococcus furiosus COM1]
gi|42559506|sp|Q8U4J3.1|RFCS_PYRFU RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
AltName: Full=PfuRFC small subunit; Contains: RecName:
Full=Pfu RFC intein
gi|18892004|gb|AAL80217.1| replication factor C, small subunit [Pyrococcus furiosus DSM 3638]
gi|393189784|gb|AFN04482.1| replication factor C small subunit [Pyrococcus furiosus COM1]
Length = 852
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 639 IFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 698
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + L +IAE EG++L + + I ++ ++R+AI +A+ ++ + V +
Sbjct: 699 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVA 756
>gi|9453897|dbj|BAB03292.1| replication factor C small subunit precursor [Pyrococcus furiosus
DSM 3638]
Length = 268
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 55 IFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 114
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + L +IAE EG++L + + I ++ ++R+AI +A+ ++ + V +
Sbjct: 115 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVA 172
>gi|170290625|ref|YP_001737441.1| DNA replication ATPase HolB small subunit [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174705|gb|ACB07758.1| ATPase involved in DNA replication HolB, small subunit [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 331
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R ++E Y + F C+ SK+ +PI+S C V + P ++
Sbjct: 107 IHLDEADNLTADAQQALRRIMEMYSATTRFIFACNYSSKIIEPIQSRCAVFRFGPIPEEA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I L IAE+EG++ I ++ +LR+AI + + M
Sbjct: 167 IKNRLIMIAEREGLKYTEDGISAIIYVAEGDLRKAINLLQTASAM 211
>gi|14590058|ref|NP_142122.1| replication factor C small subunit [Pyrococcus horikoshii OT3]
gi|42559333|sp|O57852.1|RFCS_PYRHO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
Contains: RecName: Full=Pho RFC intein
gi|3256498|dbj|BAA29181.1| 855aa long hypothetical replication factor C subunit [Pyrococcus
horikoshii OT3]
Length = 855
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 641 IFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 700
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
I + L +IAE EG++L + + I ++ ++R+AI +A+ ++ + V +
Sbjct: 701 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMV 757
>gi|289192114|ref|YP_003458055.1| transcriptional regulator, XRE family [Methanocaldococcus sp.
FS406-22]
gi|288938564|gb|ADC69319.1| transcriptional regulator, XRE family [Methanocaldococcus sp.
FS406-22]
Length = 864
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L+ DA +R +E+Y + + C+ S++ PI+S C V + P K++
Sbjct: 652 IFLDESDALTADAQNALRRTMEKYSDVCRFILSCNYPSRIIPPIQSRCAVFRFSPLKKED 711
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + L+ IAE+EG+ L E I S+ ++R+AI + +
Sbjct: 712 IAKKLKEIAEKEGLNLTESGLEAIIYVSEGDMRKAINVLQTA 753
>gi|261402851|ref|YP_003247075.1| replication factor C [Methanocaldococcus vulcanius M7]
gi|261369844|gb|ACX72593.1| Replication factor C [Methanocaldococcus vulcanius M7]
Length = 544
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L+ DA +R +E+Y + + C+ SK+ PI+S C + + P K++
Sbjct: 332 IFLDESDALTADAQNALRRTMEKYSDVARFILSCNYPSKIIPPIQSRCAIFRFSPLKKED 391
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + L+ IAE+EG+ L + I S+ ++R+AI + + ++
Sbjct: 392 IAKKLKEIAEKEGLNLTESGLDAIIYVSEGDMRKAINVLQTAAALS 437
>gi|76801102|ref|YP_326110.1| replication factor C small subunit [Natronomonas pharaonis DSM
2160]
gi|83288436|sp|Q3ITJ2.1|RFCS_NATPD RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|76556967|emb|CAI48541.1| replication factor C small subunit [Natronomonas pharaonis DSM
2160]
Length = 325
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P
Sbjct: 112 IFLDEADALTSDAQSALRRTMEQFSDNTRFILSCNYSSQIIDPIQSRCAVFRFSPLGDAA 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ E + IA+ EGI+L + + + ++R+AI +A+ M
Sbjct: 172 VDEQIRIIADTEGIELTDDGVDALVYAADGDMRKAINGLQAAAVMG 217
>gi|429216858|ref|YP_007174848.1| DNA polymerase III, subunit gamma/tau [Caldisphaera lagunensis DSM
15908]
gi|429133387|gb|AFZ70399.1| DNA polymerase III, gamma/tau subunit [Caldisphaera lagunensis DSM
15908]
Length = 333
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD +++DA +R L+E Y + + SK+ PI+S C + K++
Sbjct: 116 VLLDEADNMTSDAQQALRRLMELYSASTRFILAANYPSKIIDPIQSRCAFFRFTSLKKED 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L++IA++EG+ + I + S+ ++R+AI +AS
Sbjct: 176 VIDRLKYIADKEGVDYEEDALDIIFEISEGDMRKAINILQAS 217
>gi|374628354|ref|ZP_09700739.1| replication factor C small subunit [Methanoplanus limicola DSM
2279]
gi|373906467|gb|EHQ34571.1| replication factor C small subunit [Methanoplanus limicola DSM
2279]
Length = 325
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E Y + C+ SK+ PI+S C + + P ++
Sbjct: 107 LFLDEADALTNDAQAALRRTMENYARTCRFILSCNYSSKIIDPIQSRCAIYRFRPLDREA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E L IAE EG+ L I S ++R+AI + + +
Sbjct: 167 ITEELMHIAENEGLTLSEDAISAIIYVSAGDMRKAINALQGA 208
>gi|15988297|pdb|1IQP|A Chain A, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
gi|15988298|pdb|1IQP|B Chain B, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
gi|15988299|pdb|1IQP|C Chain C, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
gi|15988300|pdb|1IQP|D Chain D, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
gi|15988301|pdb|1IQP|E Chain E, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
gi|15988302|pdb|1IQP|F Chain F, Crystal Structure Of The Clamp Loader Small Subunit From
Pyrococcus Furiosus
Length = 327
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P ++
Sbjct: 114 IFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDED 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + L +IAE EG++L + + I ++ ++R+AI +A+ ++ + V +
Sbjct: 174 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVA 231
>gi|406701715|gb|EKD04829.1| DNA clamp loader [Trichosporon asahii var. asahii CBS 8904]
Length = 201
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 21 LERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQL 79
+E+Y ++ C + SK+ PI+S C ++++ P+ E +A++E LP
Sbjct: 14 MEKYMTNMRLIMCANSTSKIIAPIRSRCLLVRVAAPTDDE-------VAKKERFTLPPSA 66
Query: 80 AEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--GWEDDITNIATKIIEEQSPKQ 137
++ I + + NLR+A+ EA R N P + G V + WE IA I++EQSP++
Sbjct: 67 SDAIIEAADGNLRKALLVMEAMRMQN-PDLNGDVDVAKPDWELYCAKIAESIMQEQSPQR 125
>gi|407847432|gb|EKG03143.1| replication factor C, subunit 3, putative [Trypanosoma cruzi]
Length = 355
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSGDAQAALRRIIEKYT--KNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+F+A++EG++ + S +LR+ + + +AS
Sbjct: 187 SAMLSRLKFVAQEEGVRFTDEGLVAAFRLSNGDLRRCLNTLQAS 230
>gi|71662047|ref|XP_818036.1| replication factor C, subunit 3 [Trypanosoma cruzi strain CL
Brener]
gi|70883263|gb|EAN96185.1| replication factor C, subunit 3, putative [Trypanosoma cruzi]
Length = 355
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSGDAQAALRRIIEKYT--KNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+F+A++EG++ + S +LR+ + + +AS
Sbjct: 187 SAMLSRLKFVAQEEGVRFTDEGLVAAFRLSNGDLRRCLNTLQAS 230
>gi|254168320|ref|ZP_04875166.1| Replication factor C family [Aciduliprofundum boonei T469]
gi|254169364|ref|ZP_04876193.1| Replication factor C family [Aciduliprofundum boonei T469]
gi|289595866|ref|YP_003482562.1| Replication factor C [Aciduliprofundum boonei T469]
gi|197621683|gb|EDY34269.1| Replication factor C family [Aciduliprofundum boonei T469]
gi|197622829|gb|EDY35398.1| Replication factor C family [Aciduliprofundum boonei T469]
gi|289533653|gb|ADD08000.1| Replication factor C [Aciduliprofundum boonei T469]
Length = 317
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + C+ SK+ +PI+S C V + P ++
Sbjct: 104 IFLDEADALTPDAQAALRRTMEMYSRTCRFILSCNYSSKIIEPIQSRCAVFRFTPLKSED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
I + L++IA+ EG ++ I S ++R+AI + S ++ EG V
Sbjct: 164 IKKRLKYIADSEGKKITEDALNAIVYISGGDMRKAINILQMSAAISDTIDEGVV 217
>gi|448408398|ref|ZP_21574193.1| replication factor C small subunit [Halosimplex carlsbadense 2-9-1]
gi|445674253|gb|ELZ26797.1| replication factor C small subunit [Halosimplex carlsbadense 2-9-1]
Length = 327
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P S +
Sbjct: 116 IFLDEADALTSDAQGALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFAPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +EGI+ + + + ++R+AI + +A+
Sbjct: 176 VAEEMRHIAGEEGIEFTDDGLDALVYAADGDMRKAINALQAA 217
>gi|242042039|ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
gi|241922268|gb|EER95412.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
Length = 339
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 118 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ S+ +LR+AI +++ ++
Sbjct: 178 MSSRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARL 222
>gi|20089555|ref|NP_615630.1| replication factor C small subunit [Methanosarcina acetivorans C2A]
gi|42559497|sp|Q8TSX5.1|RFCS_METAC RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|19914469|gb|AAM04110.1| replication factor C, small subunit [Methanosarcina acetivorans
C2A]
Length = 338
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +ER+ + C+ SK+ +PI+S C V + S +
Sbjct: 115 IFLDEADALTADAQSALRRTMERFSSNCRFILSCNYSSKIIEPIQSRCAVYRFRRLSDEA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E LE+IA +G+ + E + ++ ++R+A+ S +A+
Sbjct: 175 IKERLEYIAGDQGLSITEGGYEALIYVAQGDMRKAVNSLQAA 216
>gi|325969252|ref|YP_004245444.1| ATPase AAA [Vulcanisaeta moutnovskia 768-28]
gi|323708455|gb|ADY01942.1| AAA ATPase central domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 327
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + S + +PI+S C++ + P K
Sbjct: 107 IILDEADNMTPDAQQALRRIMEMYTSSVRFILLANYSSGIIEPIQSRCSLFRFSPLPKDA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++ L IA +EG+++ + E I D S+ ++R+AI + +A+ +
Sbjct: 167 VLGRLRDIASREGVKVTDEALEAIWDISQGDMRKAINTLQAAASLG 212
>gi|389594993|ref|XP_003722719.1| putative replication factor C, subunit 3 [Leishmania major strain
Friedlin]
gi|323363947|emb|CBZ12953.1| putative replication factor C, subunit 3 [Leishmania major strain
Friedlin]
Length = 364
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 135 VILDEADQMSHDAQAALRRVIEKYT--RNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 192
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L ++AEQEG++ S +LR+ + + +AS
Sbjct: 193 SSMMPRLRYVAEQEGVKYTTDGLAAAFRLSHGDLRRCLNTMQAS 236
>gi|356509379|ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
max]
Length = 342
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ VS+ ++P+ S C + P S++
Sbjct: 119 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I+++EG+ L + ++ S +LR+AI +++ ++
Sbjct: 179 MSSRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARL 223
>gi|357463531|ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
gi|357520353|ref|XP_003630465.1| Replication factor C subunit [Medicago truncatula]
gi|217073528|gb|ACJ85124.1| unknown [Medicago truncatula]
gi|355491095|gb|AES72298.1| Replication factor C subunit [Medicago truncatula]
gi|355524487|gb|AET04941.1| Replication factor C subunit [Medicago truncatula]
gi|388492316|gb|AFK34224.1| unknown [Medicago truncatula]
Length = 339
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P +++
Sbjct: 119 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I ++EGI L + +++ S+ +LR+AI +++ ++
Sbjct: 179 MSSRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARL 223
>gi|50304409|ref|XP_452154.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641286|emb|CAH02547.1| KLLA0B13992p [Kluyveromyces lactis]
Length = 352
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V+++ P+ S C+ +
Sbjct: 134 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDSSN 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ L+FIA +E ++ + E+I D S+ +LR+AI +++ ++
Sbjct: 194 ALSRLQFIANEESLKYEDGVLERILDISQGDLRKAITLLQSAAKI 238
>gi|356509381|ref|XP_003523428.1| PREDICTED: replication factor C subunit 4-like isoform 2 [Glycine
max]
Length = 330
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ VS+ ++P+ S C + P S++
Sbjct: 107 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEI 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I+++EG+ L + ++ S +LR+AI +++ ++
Sbjct: 167 MSSRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARL 211
>gi|429963225|gb|ELA42769.1| hypothetical protein VICG_00084 [Vittaforma corneae ATCC 50505]
Length = 351
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ +A+ LS DA +R +E Y G K+ C++ SKL +PI+S C ++++ E
Sbjct: 131 LVIDQAEDLSKDAQAALRRTMEMYSGHFKIIMVCTETSKLIEPIRSRCMMVRIRGFRNDE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ + IA+ EG + + I NSK N ++A+ FE
Sbjct: 191 MFRICSNIAKIEGFGVDKDAIDSICKNSKGNGKRALCLFE 230
>gi|383860560|ref|XP_003705757.1| PREDICTED: replication factor C subunit 4-like [Megachile
rotundata]
Length = 357
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P +++
Sbjct: 140 IILDEADSMTAAAQAALRRTMEKESHSTRFCLICNYVSRIIEPLTSRCTKFRFKPLGEEK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+E LE+I+ +EG++ + KI + S ++R+AI ++ ++ +E +
Sbjct: 200 IIERLEYISNEEGLKAGKPVLLKIVEASGGDMRRAITCLQSITRLKGKDIEITI------ 253
Query: 120 DDITNI 125
DDI I
Sbjct: 254 DDIVEI 259
>gi|71413122|ref|XP_808715.1| replication factor C, subunit 3 [Trypanosoma cruzi strain CL
Brener]
gi|70872975|gb|EAN86864.1| replication factor C, subunit 3, putative [Trypanosoma cruzi]
Length = 355
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSGDAQAALRRIIEKYT--KNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+F+A++EG++ + S +LR+ + + +AS
Sbjct: 187 SAMLPRLKFVAQEEGVRFTDEGLVAAFRLSNGDLRRCLNTMQAS 230
>gi|50287127|ref|XP_445993.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525300|emb|CAG58917.1| unnamed protein product [Candida glabrata]
Length = 352
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSTVTRFCLICNYVTRIIDPLASRCSKFRFKSLDSSN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L+++AE+EG+++ E I D S +LR+AI + AS+ + Y
Sbjct: 197 ALQRLKYVAEEEGVKVKAGSLETILDISAGDLRRAITLLQSASKNIGY 244
>gi|71033715|ref|XP_766499.1| replication factor C subunit 2 [Theileria parva strain Muguga]
gi|68353456|gb|EAN34216.1| replication factor C subunit 2, putative [Theileria parva]
Length = 335
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y +++ C+ + K+ PI S C+V P
Sbjct: 119 IILDEADMITADAQAALRRVIENYSSISRFVLICNYLHKIIGPIYSRCSVFHFKPIETNS 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
V+ L++I QEGI + E + S ++R++I +++
Sbjct: 179 QVDRLKYICNQEGITFDQKALEFLTTVSSGDMRKSITILQST 220
>gi|71033883|ref|XP_766583.1| replication factor C subunit 5 [Theileria parva strain Muguga]
gi|68353540|gb|EAN34300.1| replication factor C subunit 5, putative [Theileria parva]
Length = 319
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQEIVEV 63
+AD LS +A +R +E ++F +S+ + P++S C I++ + EIV +
Sbjct: 93 DADTLSQEAQAALRRTMETCIKNARMFLHVRQLSRIMAPLRSRCLCIRVRSHTNDEIVGI 152
Query: 64 LEFIAEQEGI---QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
L I E I Q Q+ IA++SK NLR++I E + +E + + WE
Sbjct: 153 LRNICNSEDITPSQASDQMLRNIAESSKRNLRRSILILETIAMGGFT-LETKNFMMPWEK 211
Query: 121 DITNIATKIIEEQSP 135
++T I ++ Q+P
Sbjct: 212 NVTQIVQSVLSSQTP 226
>gi|344299747|gb|EGW30100.1| replication factor C, subunit RFC4 [Spathaspora passalidarum NRRL
Y-27907]
Length = 346
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ S C+ + + +
Sbjct: 127 IILDEADSMTNDAQSALRRTMETYSGMTRFCLICNYITRIIDPLASRCSKFRFKLLNNDD 186
Query: 60 IVEVLEFIAEQEGIQLPHQ--LAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI 114
+ L++IAEQE + L + + +++ D S +LR+AI +++ +++ + E Q I
Sbjct: 187 GLNRLKYIAEQEDLTLDQEEPVLQQVLDISGGDLRKAITYLQSASKLSNSYDEHQEI 243
>gi|253742391|gb|EES99226.1| Replication factor C, subunit 4 [Giardia intestinalis ATCC 50581]
Length = 322
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L E D ++ A +R +++ G + C+++SK ++P++S C V++++P ++ E
Sbjct: 106 VFLDECDAMTEAAQQVLRRIMDDETGSTRFCLACNNISKVIEPVQSRCCVLRIMPATQAE 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+++ L+ I E+EG++ + +++ S N++R + S + N V + G +
Sbjct: 166 LIKYLQDICEKEGVKSDTEALKELITISGNDIRSCLNSLQLVMDANNKV----VTVAGVQ 221
Query: 120 DDITNIATKIIEE 132
++ I KII +
Sbjct: 222 KALSTIDVKIINQ 234
>gi|212224565|ref|YP_002307801.1| DNA replication ATPase [Thermococcus onnurineus NA1]
gi|212009522|gb|ACJ16904.1| ATPase involved in DNA replication [Thermococcus onnurineus NA1]
Length = 326
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + C+ SK+ +PI+S C + + P + +
Sbjct: 114 IFLDEADALTQDAQQALRRTMEMFSTNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDND 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
I + +++IAE EG++L + + ++ +LR+AI +A+ ++ + V L
Sbjct: 174 IAKRIKYIAENEGLELTEDGLQALLYVAEGDLRRAINVLQAAAALDRKITDENVFLVA 231
>gi|312377422|gb|EFR24254.1| hypothetical protein AND_11259 [Anopheles darlingi]
Length = 328
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ +PI S CT + P ++
Sbjct: 131 VILDEADAMTHAAQAALRRTMEKETKTTRFCLVCNYVSRIIEPITSRCTKFRFKPLGEER 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I+E L +I +QE + + + + I D S ++R+AI + ++ ++
Sbjct: 191 IIERLRYICDQEQVTVDEAVYKDIVDISGGDMRRAITTLQSCHRL 235
>gi|448589356|ref|ZP_21649515.1| replication factor C small subunit [Haloferax elongans ATCC
BAA-1513]
gi|445735784|gb|ELZ87332.1| replication factor C small subunit [Haloferax elongans ATCC
BAA-1513]
Length = 329
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 117 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IA+ EGI+L + + + ++R+AI S +A+
Sbjct: 177 IADQTRDIAKAEGIELTEDGLDALVYAAGGDMRRAINSLQAA 218
>gi|401429678|ref|XP_003879321.1| putative replication factor C, subunit 3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495571|emb|CBZ30876.1| putative replication factor C, subunit 3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 364
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 135 VILDEADQMSYDAQAALRRVIEKYT--RNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 192
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L ++AEQEG++ S+ +LR+ + + ++S
Sbjct: 193 SAMMPRLRYVAEQEGVKYTTDGLAAAFRLSRGDLRRCLNTMQSS 236
>gi|18312140|ref|NP_558807.1| replication factor C small subunit [Pyrobaculum aerophilum str.
IM2]
gi|42559513|sp|Q8ZYK4.1|RFCS1_PYRAE RecName: Full=Replication factor C small subunit 1; Short=RFC small
subunit 1; AltName: Full=Clamp loader small subunit 1
gi|18159573|gb|AAL62989.1| replication factor C small subunit [Pyrobaculum aerophilum str.
IM2]
Length = 329
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ E L+FIA+ EG++L I + S+ ++R+AI + + N
Sbjct: 165 MAERLKFIAKNEGVELREDAINMIYELSEGDMRKAINLLQVAAATN 210
>gi|297612760|ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa subunit [Oryza sativa Japonica Group]
gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit, putative, expressed [Oryza sativa
Japonica Group]
gi|125535960|gb|EAY82448.1| hypothetical protein OsI_37665 [Oryza sativa Indica Group]
gi|125578677|gb|EAZ19823.1| hypothetical protein OsJ_35406 [Oryza sativa Japonica Group]
gi|215737297|dbj|BAG96226.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa Japonica Group]
Length = 339
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 118 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ S +LR+AI +++ ++
Sbjct: 178 MSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARL 222
>gi|412990864|emb|CCO18236.1| predicted protein [Bathycoccus prasinos]
Length = 350
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E Y + + F C+ VSK + PI S C +
Sbjct: 132 LILDEADSMTNDAQSALRRMMETYSRVTRFFILCNYVSKIIDPISSRCAKFRFKSLDGGT 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI 114
+ E + FIA+ E +QL + + S ++R+AI +++ + P + G I
Sbjct: 192 MHERINFIAKGENLQLAEGTLQALEHVSAGDMRKAITLLQSAASLFGPELTGDRI 246
>gi|409728331|ref|ZP_11271198.1| replication factor C small subunit [Halococcus hamelinensis 100A6]
gi|448722058|ref|ZP_21704598.1| replication factor C small subunit [Halococcus hamelinensis 100A6]
gi|445790282|gb|EMA40949.1| replication factor C small subunit [Halococcus hamelinensis 100A6]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ +++ PI+S C V + P
Sbjct: 111 IFLDEADALTSDAQSALRRTMEQFANNTRFILSCNYSNQIIDPIQSRCAVFRFGPLDGDS 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IAE+EGI++ + + + ++R+AI +A+
Sbjct: 171 VAEYVRRIAEEEGIEITEDGIDALVYAADGDMRKAINGLQAA 212
>gi|393245398|gb|EJD52908.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 376
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 136 IILDEADSMTQDAQAALRRIMENYARITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSS 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMN 105
LE+IA+QEG+ + + + S +LR++I + ASR N
Sbjct: 196 THGRLEYIAQQEGVNISQDTIKSLIACSGGDLRRSITYLQTASRLAN 242
>gi|448732321|ref|ZP_21714602.1| replication factor C small subunit [Halococcus salifodinae DSM
8989]
gi|445804894|gb|EMA55124.1| replication factor C small subunit [Halococcus salifodinae DSM
8989]
Length = 325
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +++
Sbjct: 113 IFLDEADALTSDAQSALRRTMEQFANNTRFILSCNYSSQIIDPIQSRCAVFRFGPLAEEA 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + +AE+EGI++ + + + ++R+A+ +A+
Sbjct: 173 VGEYVRQVAEREGIEVTDDGVDALVYAADGDMRKALNGLQAA 214
>gi|297845144|ref|XP_002890453.1| EMB1968 [Arabidopsis lyrata subsp. lyrata]
gi|297336295|gb|EFH66712.1| EMB1968 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 179 MSNRILHICNEEGLSLGGEALSTLSSISQGDLRRAITYLQSATRL 223
>gi|407464094|ref|YP_006774976.1| replication factor C [Candidatus Nitrosopumilus sp. AR2]
gi|407047282|gb|AFS82034.1| replication factor C [Candidatus Nitrosopumilus sp. AR2]
Length = 316
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD+++ DA +R ++E + + F +++SK+ PI+S C + +++
Sbjct: 107 IILDEADEMTADAQTALRRIIEDTAKICRFIFIANNISKIIDPIQSRCATFKFTSIPEED 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++ LE IAE E ++ + + I D S+ +LR AI +A+ +
Sbjct: 167 VIARLEEIAENEKVKSDKKGLKAIYDYSEGDLRHAINLLQATASLG 212
>gi|365762051|gb|EHN03666.1| Rfc5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841849|gb|EJT44172.1| RFC5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 354
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y K + + C S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMICDSMSPIIAPIKSRCLLIRCPTPSDNE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I ++L + E I L + +KIA S NLR ++ E+ N ++ +I
Sbjct: 198 ISKILSDVVTNERINLETKDILQKIARESNGNLRISLLMLESMALNNEMTLKSSSPIIKA 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWLIVIQKLTRKIVKERS 275
>gi|242082974|ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
gi|241942605|gb|EES15750.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
Length = 339
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 118 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLSEEV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ S+ +LR+AI +++ ++
Sbjct: 178 MSNRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARL 222
>gi|119873156|ref|YP_931163.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
gi|150415671|sp|A1RV38.1|RFCS2_PYRIL RecName: Full=Replication factor C small subunit 2; Short=RFC small
subunit 2; AltName: Full=Clamp loader small subunit 2
gi|119674564|gb|ABL88820.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
Length = 320
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S +I+ P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYISGIIEPIQSRVVMIRFNPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
++ L +IAE EG+++ E I + ++ ++R+AI + +
Sbjct: 165 VISRLRYIAENEGVKISDDALETIYEFTQGDMRKAINALQ 204
>gi|312136661|ref|YP_004003998.1| replication factor c small subunit [Methanothermus fervidus DSM
2088]
gi|311224380|gb|ADP77236.1| replication factor C small subunit [Methanothermus fervidus DSM
2088]
Length = 318
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L E D ++ DA +R +E Y C+ SK+ +P++S C V + LP ++
Sbjct: 103 VFLDEVDNMTRDAQQALRREMEMYAETATFILSCNYSSKIIEPVQSRCVVFRFLPLKSKD 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I++ L++I E+E + + + I ++ +LR+AI +A+ ++ T E
Sbjct: 163 IIKRLKYICEKENVDYEEKALDAIVYFAEGDLRKAINILQAAAALDK---------TITE 213
Query: 120 DDITNIATK 128
DDI ++ +K
Sbjct: 214 DDIYDVVSK 222
>gi|428673452|gb|EKX74365.1| replication factor C subunit 5, putative [Babesia equi]
Length = 351
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEIVEV 63
+AD LS +A +R +E Y ++F +S++ P ++S C I++ + QEI+++
Sbjct: 135 DADSLSHEAQAALRRTMETYIKNARMFLHVRQLSRIMPPLRSRCLCIRIRSHTPQEILDI 194
Query: 64 LEFIAEQEGIQLPHQLAE----KIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
L I E I P Q ++ IA++S NLR++I EA + +E + + WE
Sbjct: 195 LREICNAENIT-PGQASDSMLLNIAESSNRNLRRSILMLEAVAMGGFT-LETKNFMMPWE 252
Query: 120 DDITNIATKIIEEQSP 135
+I I + Q+P
Sbjct: 253 RNIKQIVDSALSSQTP 268
>gi|159110203|ref|XP_001705363.1| Replication factor C, subunit 4 [Giardia lamblia ATCC 50803]
gi|157433446|gb|EDO77689.1| Replication factor C, subunit 4 [Giardia lamblia ATCC 50803]
Length = 322
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L E D ++ A +R +++ G + C+++SK ++P++S C V++++P ++ E
Sbjct: 106 VFLDECDAMTEAAQQVLRRIMDDETGSTRFCLACNNISKVIEPVQSRCCVLRIMPATQAE 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+++ L+ I E+EG++ + +++ S N++R + S + N + + G +
Sbjct: 166 LIKYLQEICEKEGVKSDTEALKELISISGNDVRSCLNSLQLVADANNKV----ITVAGVQ 221
Query: 120 DDITNIATKIIEE 132
++ I K+I++
Sbjct: 222 KALSTIDVKVIDQ 234
>gi|334182754|ref|NP_001185060.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
gi|332192020|gb|AEE30141.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
Length = 332
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 112 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 172 MSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRL 216
>gi|18395021|ref|NP_564148.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
gi|15810343|gb|AAL07059.1| putative replication factor [Arabidopsis thaliana]
gi|17065122|gb|AAL32715.1| Similar replication factor C, 37-kDa subunit [Arabidopsis thaliana]
gi|21536935|gb|AAM61276.1| putative replication factor [Arabidopsis thaliana]
gi|34098857|gb|AAQ56811.1| At1g21690 [Arabidopsis thaliana]
gi|332192018|gb|AEE30139.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
Length = 339
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 179 MSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRL 223
>gi|154344961|ref|XP_001568422.1| putative replication factor C, subunit 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065759|emb|CAM43533.1| putative replication factor C, subunit 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 364
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 135 VILDEADQMSHDAQAALRRVIEKYT--RNVRFCLLCNHINKIIPALQSRCTRFRFAPVKK 192
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L ++AE EG++ S+ +LR+ + + +AS
Sbjct: 193 SAMMPRLRYVAEHEGVKYTTDGLAAAYRLSQGDLRRCLNTMQAS 236
>gi|448606584|ref|ZP_21659010.1| replication factor C small subunit [Haloferax sulfurifontis ATCC
BAA-897]
gi|445738792|gb|ELZ90304.1| replication factor C small subunit [Haloferax sulfurifontis ATCC
BAA-897]
Length = 327
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA EGI++ + + + ++R+AI S +A+
Sbjct: 175 VAEQVRDIAAAEGIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|323338653|gb|EGA79869.1| Rfc5p [Saccharomyces cerevisiae Vin13]
Length = 356
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C +S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I +L + E IQL + ++IA S NLR ++ E+ N ++ +I
Sbjct: 198 ISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWIIVIHKLTXKIVKERS 275
>gi|30687479|ref|NP_849695.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
gi|332192019|gb|AEE30140.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
Length = 327
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 107 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 167 MSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRL 211
>gi|121705176|ref|XP_001270851.1| DNA replication factor C subunit Rfc2, putative [Aspergillus
clavatus NRRL 1]
gi|119398997|gb|EAW09425.1| DNA replication factor C subunit Rfc2, putative [Aspergillus
clavatus NRRL 1]
Length = 391
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ + P
Sbjct: 151 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 210
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E L+ IAEQE + L + EK+ + +LR+AI +++ ++
Sbjct: 211 AGERLKSIAEQENLNLEDGVIEKLISCGEGDLRRAITYMQSAARL 255
>gi|323310134|gb|EGA63327.1| Rfc5p [Saccharomyces cerevisiae FostersO]
Length = 317
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C +S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I +L + E IQL + ++IA S NLR ++ E+ N ++ +I
Sbjct: 198 ISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWIIVIHKLTRKIVKERS 275
>gi|448579007|ref|ZP_21644323.1| replication factor C small subunit [Haloferax larsenii JCM 13917]
gi|445724360|gb|ELZ75993.1| replication factor C small subunit [Haloferax larsenii JCM 13917]
Length = 329
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 117 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IA EGI+L + + + ++R+AI S +A+
Sbjct: 177 IADQTRDIAAAEGIELTEDGLDALVYAAGGDMRRAINSLQAA 218
>gi|452205944|ref|YP_007486066.1| replication factor C small subunit [Natronomonas moolapensis
8.8.11]
gi|452082044|emb|CCQ35295.1| replication factor C small subunit [Natronomonas moolapensis
8.8.11]
Length = 324
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+++A +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 112 IFLDEADALTSEAQSALRRTMEQFSDNTRFILSCNYSSQIIDPIQSRCAVFRFSPLGEAA 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E +E IAE EGI++ + + + ++R+AI +A+
Sbjct: 172 IEEQIEAIAEAEGIEITDDGMDALVYAAAGDMRKAINGLQAA 213
>gi|323356056|gb|EGA87861.1| Rfc5p [Saccharomyces cerevisiae VL3]
Length = 354
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C +S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I +L + E IQL + ++IA S NLR ++ E+ N ++ +I
Sbjct: 198 ISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWIIVIHKLTXKIVKERS 275
>gi|156836873|ref|XP_001642477.1| hypothetical protein Kpol_264p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113011|gb|EDO14619.1| hypothetical protein Kpol_264p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 356
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EAD L+ DA +R +E+Y K + + C S S + PIKS C +I+ P+ E
Sbjct: 138 VVINEADSLTRDAQAALRRTMEKYSKNIRLIMVCDSMSSIIPPIKSRCLMIRCSAPTDDE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
+V+ L ++++E +Q+ + + KIA S NLR + E+ N ++ +I
Sbjct: 198 VVQNLMEVSKKENLQIESNDILNKIAIESDGNLRLGLLMLESMALTNELQLKSSTAIIRP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI E+S
Sbjct: 258 DWLVVILKLTNKIQRERS 275
>gi|147918695|ref|YP_687582.1| replication factor C small subunit [Methanocella arvoryzae MRE50]
gi|121687726|sp|Q0W037.1|RFCS_UNCMA RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|110622978|emb|CAJ38256.1| replication factor C (clamp loader), small subunit [Methanocella
arvoryzae MRE50]
Length = 322
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY + C+ SK+ +PI+S C V + P + +
Sbjct: 106 IFLDEADALTSDAQSALRRTMERYAATCRFIISCNYSSKIIEPIQSRCAVYRFGPLNATD 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IA+ EG+++ + + ++ ++R+AI + +++
Sbjct: 166 ITTGITRIAKNEGLKIEKDGMDALIYVARGDMRRAINALQSA 207
>gi|448737973|ref|ZP_21720004.1| replication factor C small subunit [Halococcus thailandensis JCM
13552]
gi|445802557|gb|EMA52861.1| replication factor C small subunit [Halococcus thailandensis JCM
13552]
Length = 326
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ +++ PI+S C V + P +
Sbjct: 112 IFLDEADALTSDAQSALRRTMEQFANNTRFILSCNYSNQIIDPIQSRCAVFRFGPLPETA 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E +E IA +EGI++ + + + ++R+AI +A+
Sbjct: 172 VAEYVERIAGEEGIEITDDGVDALVYAADGDMRKAINGLQAA 213
>gi|334182756|ref|NP_001185061.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
gi|332192021|gb|AEE30142.1| replication factor C subunit 2/4 [Arabidopsis thaliana]
Length = 341
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 179 MSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRL 223
>gi|407408177|gb|EKF31712.1| replication factor C, subunit 3, putative [Trypanosoma cruzi
marinkellei]
Length = 355
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSGDAQAALRRIIEKYT--KNVRFCILCNHINKIIPALQSRCTRFRFAPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+F+A++EG++ S +LR+ + + +AS
Sbjct: 187 NAMLPRLKFVAQEEGVRFTDGGLVAAFRLSNGDLRRCLNTMQAS 230
>gi|336121562|ref|YP_004576337.1| Replication factor C [Methanothermococcus okinawensis IH1]
gi|334856083|gb|AEH06559.1| Replication factor C [Methanothermococcus okinawensis IH1]
Length = 883
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ S++ PI+S C + + P +++
Sbjct: 670 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSRIIPPIQSRCAIFRFSPLKRED 729
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I++ ++ IAE EGI + + I S+ +LR+AI + +
Sbjct: 730 IIKKIKEIAENEGITIDESGIDAIIYVSEGDLRKAINVLQTA 771
>gi|18312778|ref|NP_559445.1| replication factor C small subunit [Pyrobaculum aerophilum str.
IM2]
gi|42559510|sp|Q8ZWS2.1|RFCS2_PYRAE RecName: Full=Replication factor C small subunit 2; Short=RFC small
subunit 2; AltName: Full=Clamp loader small subunit 2
gi|18160261|gb|AAL63627.1| replication factor C small subunit [Pyrobaculum aerophilum str.
IM2]
Length = 319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS + +PI+S +I+ P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSGIIEPIQSRTVMIRFSPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ L +IAE EG+++ E I + ++ ++R+AI + +
Sbjct: 165 VFARLRYIAENEGVKVSDDALEAIYEFTQGDMRRAINALQ 204
>gi|156550041|ref|XP_001605078.1| PREDICTED: replication factor C subunit 4-like [Nasonia
vitripennis]
Length = 358
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P +++
Sbjct: 141 IILDEADSMTDAAQSALRRTMEKESQTTRFCLICNYVSRIIEPLTSRCTKFRFKPLGEEK 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE--------- 110
I+E LE+I +E ++ + + + D S +LR+AI ++ ++ +E
Sbjct: 201 IIERLEYICGEEDLKAEKSVLKLVVDASGGDLRRAITCLQSVTRLKGIGIEVTNNDVLEV 260
Query: 111 GQVILTGWEDDITNI 125
V+ T W DD+ +
Sbjct: 261 TGVVPTKWLDDLLRV 275
>gi|290986773|ref|XP_002676098.1| predicted protein [Naegleria gruberi]
gi|284089698|gb|EFC43354.1| predicted protein [Naegleria gruberi]
Length = 337
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A MR ++E Y + C+D SK+ +PI+S C +++ + E
Sbjct: 120 VILDEADSMTSAAQQAMRRIMEIYSSTTRFALACNDSSKIIEPIQSRCALVRYKRLTDAE 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
++ L I E E +Q E I S ++R AI S +A+ Q
Sbjct: 180 LLTRLIVICELEHVQKTEDGLESILYTSDGDMRNAINSLQATYQ 223
>gi|167045379|gb|ABZ10035.1| putative ATPase family associated with various cellular activities
(AAA) [uncultured marine microorganism HF4000_APKG10F13]
Length = 323
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++ A +R +E+Y + C+ SK+ +PI+S C V + P ++
Sbjct: 104 IFLDEADALTSAAQAALRRTMEKYSRTCRFVLSCNYSSKIIEPIQSRCAVFRFRPLQGED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ L+FIA +E +++ E +A ++ +LR+AI S +
Sbjct: 164 VQRYLKFIAGREKLKVNDDAYEALAYLAQGDLRRAINSLQ 203
>gi|365982197|ref|XP_003667932.1| hypothetical protein NDAI_0A05340 [Naumovozyma dairenensis CBS 421]
gi|343766698|emb|CCD22689.1| hypothetical protein NDAI_0A05340 [Naumovozyma dairenensis CBS 421]
Length = 358
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ +A+ L+ DA +R +E+Y + + + C S S + PI+S C +I++ P E
Sbjct: 138 VIINDANSLTRDAQAALRRTMEKYSRNIRLIMLCDSMSSIISPIRSRCLMIRVPAPLNGE 197
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEA---SRQMNYPFVEGQVIL 115
IV +L +A +E +++ + + IA S NLR A+ E+ + ++N V +I
Sbjct: 198 IVNILNEVASKENVKIENGSILNHIAKESNANLRVALLMLESMSLNNELNLK-VNTPIIR 256
Query: 116 TGWEDDITNIATKIIEEQS 134
W I + KI +++S
Sbjct: 257 PDWMVVILKLGNKIQKDKS 275
>gi|398364719|ref|NP_009644.3| replication factor C subunit 5 [Saccharomyces cerevisiae S288c]
gi|586518|sp|P38251.1|RFC5_YEAST RecName: Full=Replication factor C subunit 5; Short=Replication
factor C5; AltName: Full=Activator 1 40 kDa subunit
gi|476048|emb|CAA55595.1| YBR0810 [Saccharomyces cerevisiae]
gi|536354|emb|CAA85036.1| RFC5 [Saccharomyces cerevisiae]
gi|841471|gb|AAC49065.1| Rfc5p [Saccharomyces cerevisiae]
gi|51013797|gb|AAT93192.1| YBR087W [Saccharomyces cerevisiae]
gi|151946482|gb|EDN64704.1| replication factor C subunit 5 [Saccharomyces cerevisiae YJM789]
gi|190408751|gb|EDV12016.1| replication factor C subunit 5 [Saccharomyces cerevisiae RM11-1a]
gi|207347704|gb|EDZ73792.1| YBR087Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274035|gb|EEU08949.1| Rfc5p [Saccharomyces cerevisiae JAY291]
gi|285810423|tpg|DAA07208.1| TPA: replication factor C subunit 5 [Saccharomyces cerevisiae
S288c]
gi|290878103|emb|CBK39162.1| Rfc5p [Saccharomyces cerevisiae EC1118]
gi|323305938|gb|EGA59673.1| Rfc5p [Saccharomyces cerevisiae FostersB]
gi|323334562|gb|EGA75936.1| Rfc5p [Saccharomyces cerevisiae AWRI796]
gi|323349712|gb|EGA83927.1| Rfc5p [Saccharomyces cerevisiae Lalvin QA23]
gi|349576467|dbj|GAA21638.1| K7_Rfc5p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767135|gb|EHN08623.1| Rfc5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300928|gb|EIW12017.1| Rfc5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 354
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C +S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I +L + E IQL + ++IA S NLR ++ E+ N ++ +I
Sbjct: 198 ISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWIIVIHKLTRKIVKERS 275
>gi|307178287|gb|EFN67059.1| Replication factor C subunit 4 [Camponotus floridanus]
Length = 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E+ + C+ +S++ +PI S CT + P S ++
Sbjct: 140 IILDEADSMTGAAQTALRRIMEKEAHSTRFCLVCNYLSRIIKPIASRCTKFRFKPLSDEK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ LE+I +E ++ + EKI + S +LRQA+
Sbjct: 200 SISRLEYICNEENLKADRSVLEKIVEASGGDLRQAV 235
>gi|307595017|ref|YP_003901334.1| replication factor C [Vulcanisaeta distributa DSM 14429]
gi|307550218|gb|ADN50283.1| Replication factor C [Vulcanisaeta distributa DSM 14429]
Length = 327
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + S + +PI+S C++ + P K
Sbjct: 107 IILDEADNMTPDAQQALRRIMEMYTTSVRFILLANYPSGIIEPIQSRCSLFRFSPLPKDA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
++ L IA +EG+++ E I D S+ ++R+AI + +A+ +
Sbjct: 167 VLGRLREIASKEGVKVTDDALEAIWDVSQGDMRKAINTLQAAASLG 212
>gi|356515927|ref|XP_003526648.1| PREDICTED: replication factor C subunit 4-like isoform 3 [Glycine
max]
Length = 335
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ VS+ ++P+ S C + P S++
Sbjct: 112 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEI 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I+++EG+ L + ++ S +LR+AI +++ ++
Sbjct: 172 MSSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARL 216
>gi|401626895|gb|EJS44813.1| rfc5p [Saccharomyces arboricola H-6]
Length = 354
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y K + + C S + PIKS C +++ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMICNSMSPIIAPIKSRCLLVRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I ++L + E I L + +KIA S NLR ++ E+ N ++ +I
Sbjct: 198 ISKILSDVVTNERIHLETKDILQKIAYESNGNLRISLLMLESMALNNELTLKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWMIVIQKLTRKIVKERS 275
>gi|356515925|ref|XP_003526647.1| PREDICTED: replication factor C subunit 4-like isoform 2 [Glycine
max]
Length = 330
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ VS+ ++P+ S C + P S++
Sbjct: 107 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEI 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I+++EG+ L + ++ S +LR+AI +++ ++
Sbjct: 167 MSSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARL 211
>gi|268325481|emb|CBH39069.1| replication factor C, small subunit [uncultured archaeon]
gi|268325789|emb|CBH39377.1| replication factor C, small subunit [uncultured archaeon]
Length = 322
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ A +R +ERY G + C+ SK+ +PI+S C+V + S
Sbjct: 106 IFLDEADALTDAAQSALRRTMERYSGTCRFILSCNYSSKIIEPIQSRCSVYRFKSLSYDA 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I ++IA+ EG+ L I S ++R+AI + +++
Sbjct: 166 IASRAKYIADTEGLTLSEDALRAINYVSMGDMRRAINALQSA 207
>gi|242062786|ref|XP_002452682.1| hypothetical protein SORBIDRAFT_04g030580 [Sorghum bicolor]
gi|241932513|gb|EES05658.1| hypothetical protein SORBIDRAFT_04g030580 [Sorghum bicolor]
Length = 140
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 87 SKNNLRQAIRSFEASRQMNYPFVEGQVILTGWEDDITNIATKIIEEQSPKQ 137
++ NLR+AI + EA + NYPF++GQ I GWE + +A +I+++ +PK+
Sbjct: 2 ARKNLREAILALEACKGNNYPFIDGQAIPLGWEQVLEELAAEILDDPAPKR 52
>gi|356515923|ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
max]
Length = 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + + FF C+ VS+ ++P+ S C + P S++
Sbjct: 119 IVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + +I+++EG+ L + ++ S +LR+AI +++ ++
Sbjct: 179 MSSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARL 223
>gi|428673231|gb|EKX74144.1| replication factor C subunit 2, putative [Babesia equi]
Length = 228
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++DA +R ++E Y +++ C+ + K+ PI S C+ P +
Sbjct: 119 IILDEADMITSDAQAALRRVIENYSNISRFILICNYLHKIIGPIYSRCSAFHFKPIEQNS 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V+ LE+I +QEGI + + S+ ++R++I
Sbjct: 179 QVDRLEYICKQEGIAYTTSALQFLTKISQGDMRKSI 214
>gi|50513625|pdb|1SXJ|E Chain E, Crystal Structure Of The Eukaryotic Clamp Loader
(Replication Factor C, Rfc) Bound To The Dna Sliding
Clamp (Proliferating Cell Nuclear Antigen, Pcna)
Length = 354
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C +S + PIKS C +I+ PS E
Sbjct: 138 VIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQ--VILT 116
I +L + E IQL + ++IA S NLR ++ E+ N ++ +I
Sbjct: 198 ISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257
Query: 117 GWEDDITNIATKIIEEQS 134
W I + KI++E+S
Sbjct: 258 DWIIVIHKLTRKIVKERS 275
>gi|401625031|gb|EJS43057.1| rfc2p [Saccharomyces arboricola H-6]
Length = 353
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ +
Sbjct: 137 IILDEADSMTADAQSALRRTMETYSSVTRFCLICNYVTRIIDPLASRCSKFRFKALDANN 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
++ L +I+EQE ++ + E+I D S +LR+ I +++ + +G+ I +
Sbjct: 197 AIDRLRYISEQENVKCDAGVLERILDISAGDLRRGITLLQSASKRAQYLGDGKNITSTQV 256
Query: 120 DDITNIATK 128
+++ + K
Sbjct: 257 EELAGVVPK 265
>gi|159484076|ref|XP_001700086.1| DNA replication factor C complex subunit 2 [Chlamydomonas
reinhardtii]
gi|158272582|gb|EDO98380.1| DNA replication factor C complex subunit 2 [Chlamydomonas
reinhardtii]
Length = 340
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E Y G + C+ SK+ +PI+S C +++ ++
Sbjct: 125 VILDEADSMTAGAQQALRRTMEIYSGTTRFALACNMSSKIIEPIQSRCAIVRYTRIPDED 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR 102
I+ + +AE+EG+ E + + ++RQA+ + +A+
Sbjct: 185 ILARMRLVAEKEGVTYNDAGMEAVIFTADGDMRQALNNMQATH 227
>gi|313124845|ref|YP_004035109.1| replication factor c small subunit [Halogeometricum borinquense DSM
11551]
gi|448287254|ref|ZP_21478467.1| replication factor C small subunit [Halogeometricum borinquense DSM
11551]
gi|312291210|gb|ADQ65670.1| replication factor C small subunit [Halogeometricum borinquense DSM
11551]
gi|445572462|gb|ELY27000.1| replication factor C small subunit [Halogeometricum borinquense DSM
11551]
Length = 328
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTSDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E ++ IAE E I+L + + + ++R+AI S +A+
Sbjct: 175 VREQVKDIAETEEIELTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|448445134|ref|ZP_21590189.1| replication factor C small subunit [Halorubrum saccharovorum DSM
1137]
gi|445685440|gb|ELZ37794.1| replication factor C small subunit [Halorubrum saccharovorum DSM
1137]
Length = 328
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IA EGI++ + + + + ++R+AI S +A+
Sbjct: 176 VAAQTREIAAAEGIEVTDEGVDALVYAADGDMRRAINSLQAA 217
>gi|66808355|ref|XP_637900.1| replication factor C subunit [Dictyostelium discoideum AX4]
gi|74853593|sp|Q54MD4.1|RFC4_DICDI RecName: Full=Probable replication factor C subunit 4; AltName:
Full=Activator 1 subunit 4
gi|60466332|gb|EAL64392.1| replication factor C subunit [Dictyostelium discoideum AX4]
Length = 347
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++TDA +R +E + C+ +S++ P+ S C + P
Sbjct: 120 IILDEADSMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVA 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+E L+FI++QEGI+ + + I S ++R+AI +++ + F ++ E
Sbjct: 180 TIERLKFISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSA----FRFFANKI----SE 231
Query: 120 DDITNIA 126
D I NIA
Sbjct: 232 DVIYNIA 238
>gi|352683023|ref|YP_004893547.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
gi|350275822|emb|CCC82469.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
Length = 328
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD +++DA +R ++E Y + + VS++ PI S C V + P K
Sbjct: 107 VVLDEADNMTSDAQQALRRIMEMYAATTRFVLLANYVSRIIDPILSRCAVFRFPPMPKPL 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ + L++IA QE I+L + I + S+ ++R+AI
Sbjct: 167 MAQRLQYIASQERIKLTEDGIDAIYEISQGDMRRAI 202
>gi|448726685|ref|ZP_21709077.1| replication factor C small subunit [Halococcus morrhuae DSM 1307]
gi|445793731|gb|EMA44302.1| replication factor C small subunit [Halococcus morrhuae DSM 1307]
Length = 326
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ +++ PI+S C V + P +
Sbjct: 112 IFLDEADALTSDAQSALRRTMEQFANNTRFILSCNYSNQIIDPIQSRCAVFRFGPLPETA 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E +E IA +EGI++ + + + ++R+AI +A+
Sbjct: 172 VAEYVEQIAGEEGIEITDDGVDALVYAADGDMRKAINGLQAA 213
>gi|313226190|emb|CBY21333.1| unnamed protein product [Oikopleura dioica]
Length = 357
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ EA++L+ DA +R +E+Y ++ SKL P ++S C I++ PS +E
Sbjct: 132 IVITEANRLTKDAQHGLRRTMEKYMSTCRMILLSESTSKLIPALRSRCLGIRVQAPSTEE 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ + L E E ++ + +I S NLR+A+ E + N G WE
Sbjct: 192 VKQCLMQACEIERFEMTDEQINRIVKLSDRNLRKALLLGEVCKVKN--ITNGDPPAYDWE 249
Query: 120 DDITNIATKIIEEQSPKQ 137
+ + I+ QSP Q
Sbjct: 250 EFLDKTGKMILRNQSPSQ 267
>gi|345006147|ref|YP_004809000.1| replication factor C small subunit [halophilic archaeon DL31]
gi|344321773|gb|AEN06627.1| Replication factor C small subunit [halophilic archaeon DL31]
Length = 327
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 114 IFLDEADSLTSDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I L IAE E I++ + + + + ++R+ I S +A+
Sbjct: 174 IANQLGEIAEIEAIEVTDEGFDALVYAANGDMRRGINSLQAA 215
>gi|325181066|emb|CCA15478.1| replication factor C subunit 4 putative [Albugo laibachii Nc14]
Length = 333
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R ++E Y + + C+ VS++ PI S C + P +K+
Sbjct: 116 IVLDEADSMTNDAQSALRRMMEDYSKVTRFCLICNYVSRIIDPIASRCVKFRFSPLTKES 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
+ L +I QE ++L + + + D + +LR+AI +++RQ
Sbjct: 176 MAARLSYIGSQENLRLDDDIIDTLLDCANGDLRKAINLMQSARQ 219
>gi|321264422|ref|XP_003196928.1| DNA replication factor (activator 1 subunit) [Cryptococcus gattii
WM276]
gi|317463406|gb|ADV25141.1| DNA replication factor (activator 1 subunit), putative
[Cryptococcus gattii WM276]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P ++
Sbjct: 132 IILDEADSMTQDAQSALRRIMETYSKITRFCLVCNYVTRIIEPLASRCSKFRFKPLEQES 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E IAE EG+Q + I + + +LR+AI + +++++
Sbjct: 192 TRARMEMIAENEGVQTDPGVLSLILELAGGDLRKAITYLQTAQRLH 237
>gi|194700788|gb|ACF84478.1| unknown [Zea mays]
gi|194706416|gb|ACF87292.1| unknown [Zea mays]
gi|413916289|gb|AFW56221.1| replication factor C subunit 2 [Zea mays]
Length = 339
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 118 IILDEADSMTEDAQNALRRTTETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ S+ +LR+AI +++ ++
Sbjct: 178 MSSRIMHICNEEGLNLNAQAMSTLSVISQGDLRRAITYLQSAARL 222
>gi|332021958|gb|EGI62288.1| Replication factor C subunit 4 [Acromyrmex echinatior]
Length = 356
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E+ + C+ +S++ +PI S CT + P S ++
Sbjct: 141 IILDEADSMTGAAQTALRRIMEKESHSTRFCLVCNYLSRIIKPIASRCTKFRFKPLSDEK 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ LE+I +E ++ + EKI + S +LRQA+
Sbjct: 201 SIARLEYICNEENLKADKSVLEKIVEASGGDLRQAV 236
>gi|171186449|ref|YP_001795368.1| replication factor C small subunit [Pyrobaculum neutrophilum
V24Sta]
gi|170935661|gb|ACB40922.1| Replication factor C [Pyrobaculum neutrophilum V24Sta]
Length = 328
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 104 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSL 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ E L++IA++EGI++ + I + S+ ++R+AI + + N
Sbjct: 164 MAERLKYIAKREGIEVGEDALDLIYELSEGDMRKAINLLQVAAATN 209
>gi|449449767|ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
Length = 336
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E + + + FF C+ +S++ +P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + + I +EG+ L + ++ S+ +LR+AI +++ ++
Sbjct: 179 MSKRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARL 223
>gi|226492916|ref|NP_001148581.1| replication factor C subunit 2 [Zea mays]
gi|195620566|gb|ACG32113.1| replication factor C subunit 2 [Zea mays]
Length = 339
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 118 IILDEADSMTEDAQNALRRTTETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ S+ +LR+AI +++ ++
Sbjct: 178 MSSRIMHICNEEGLNLNAQAMSTLSVISQGDLRRAITYLQSAARL 222
>gi|302412925|ref|XP_003004295.1| replication factor C subunit 5 [Verticillium albo-atrum VaMs.102]
gi|261356871|gb|EEY19299.1| replication factor C subunit 5 [Verticillium albo-atrum VaMs.102]
Length = 354
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 40 LQPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ PI+S ++++ P+ EI +VL AE+EG + L +IA S NLR+A+ +E
Sbjct: 174 IAPIRSRTLLVRVAAPTHAEICDVLGQSAEREGWPVAKGLHMRIAQESGRNLRRALLMYE 233
Query: 100 ASRQMNYPFVEGQVI-LTGWEDDITNIATKIIEEQSPKQ 137
A N + I WE I IA +I+EE +P +
Sbjct: 234 AVHAQNEKVTDSTRIPPPDWEALIGQIAKEIMEEHTPAR 272
>gi|401884137|gb|EJT48309.1| DNA replication factor (activator 1 subunit) [Trichosporon asahii
var. asahii CBS 2479]
Length = 389
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 132 IILDEADSMTQDAQSALRRIMETYSRITRFCLVCNYVTRIIEPVASRCSKFRFRPLEQSS 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E IAE EG+Q + E I + +LR+AI + +++++
Sbjct: 192 SQARMEMIAENEGVQADPGVLELILQLAGGDLRKAITYLQTAQRLH 237
>gi|384252312|gb|EIE25788.1| putative replication factor C 37 kDa subunit [Coccomyxa
subellipsoidea C-169]
Length = 329
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E + + + F C+ VS+ ++P+ S C + P
Sbjct: 114 LILDEADAMTQDAQNALRRTMEAHSKVTRFIFICNYVSRIIEPLASRCAKFRFRPLHGGI 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+ + I +EG+QL E + S +LR+AI + +++ ++ VE Q +L
Sbjct: 174 MSARISHICNEEGVQLQEGAMETLGKVSGGDLRKAITTLQSAVRLKGLQVEPQTLL 229
>gi|350426161|ref|XP_003494352.1| PREDICTED: replication factor C subunit 4-like [Bombus impatiens]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P + +
Sbjct: 140 IILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRIIEPLTSRCTKFRFKPLGEDK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV------ 113
IVE LE+I ++E ++ + KI + S +LR+AI ++ ++ ++ V
Sbjct: 200 IVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQSITRLKGKGIDITVDDIIEI 259
Query: 114 ---ILTGWEDDITNI 125
+ W DD+ N+
Sbjct: 260 IGIVPDKWLDDLMNV 274
>gi|340721765|ref|XP_003399285.1| PREDICTED: replication factor C subunit 4-like [Bombus terrestris]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P + +
Sbjct: 140 IILDEADSMTNAAQAALRRTMEKESHTTRFCLICNYVSRIIEPLTSRCTKFRFKPLGEDK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV------ 113
IVE LE+I ++E ++ + KI + S +LR+AI ++ ++ + V
Sbjct: 200 IVERLEYICKEEDLKASKPVLLKIVEASGGDLRRAITCLQSITRLKGKGTDITVDDIIEI 259
Query: 114 ---ILTGWEDDITNI 125
+ W DD+ N+
Sbjct: 260 IGIVPDKWLDDLMNV 274
>gi|406695817|gb|EKC99116.1| DNA replication factor (activator 1 subunit) [Trichosporon asahii
var. asahii CBS 8904]
Length = 389
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 132 IILDEADSMTQDAQSALRRIMETYSRITRFCLVCNYVTRIIEPVASRCSKFRFRPLEQSS 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E IAE EG+Q + E I + +LR+AI + +++++
Sbjct: 192 SQARMEMIAENEGVQADPGVLELILQLAGGDLRKAITYLQTAQRLH 237
>gi|224066809|ref|XP_002302226.1| predicted protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 144 VLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPMH 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG 117
+ E L+ + E EG+ +P E + S ++R+A+ +++ + E V L TG
Sbjct: 204 VGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALNILQSTHMASQQITEETVYLCTG 262
>gi|379003246|ref|YP_005258918.1| DNA polymerase III subunit gamma and tau [Pyrobaculum oguniense
TE7]
gi|375158699|gb|AFA38311.1| DNA polymerase III, gamma/tau subunits [Pyrobaculum oguniense TE7]
Length = 322
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S +I+ P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEMYAQNTRFILLANYISGIIEPIQSRTVMIRFSPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ L +IA+ EG+++ E I + ++ ++R+AI + +
Sbjct: 165 VFARLRYIADNEGVKITDDALEAIYEFTQGDMRRAINALQ 204
>gi|145592047|ref|YP_001154049.1| replication factor C small subunit [Pyrobaculum arsenaticum DSM
13514]
gi|158514167|sp|A4WLY0.1|RFCS2_PYRAR RecName: Full=Replication factor C small subunit 2; Short=RFC small
subunit 2; AltName: Full=Clamp loader small subunit 2
gi|145283815|gb|ABP51397.1| replication factor C small subunit [Pyrobaculum arsenaticum DSM
13514]
Length = 322
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S +I+ P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEMYAQNTRFILLANYISGIIEPIQSRTVMIRFSPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ L +IA+ EG+++ E I + ++ ++R+AI + +
Sbjct: 165 VFARLRYIADNEGVKISDDALEAIYEFTQGDMRRAINALQ 204
>gi|440297885|gb|ELP90526.1| replication factor C subunit, putative [Entamoeba invadens IP1]
Length = 328
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L E+DKL+ DA +R LE+Y G + F C++V+ + P I+S C + P S +
Sbjct: 108 IVLDESDKLTKDAQNALRRTLEQYSGNCRFVFICNEVNLITPAIQSRCAKFRFGPLSPEA 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ ++++ I ++E + + + + D SK + R I + +A
Sbjct: 168 LKKIMKHITDEEKMVVDEDAQQSLIDISKGDARTIINTLQA 208
>gi|145590269|ref|YP_001152271.1| replication factor C small subunit [Pyrobaculum arsenaticum DSM
13514]
gi|158514158|sp|A4WGV2.1|RFCS1_PYRAR RecName: Full=Replication factor C small subunit 1; Short=RFC small
subunit 1; AltName: Full=Clamp loader small subunit 1
gi|145282037|gb|ABP49619.1| Replication factor C [Pyrobaculum arsenaticum DSM 13514]
Length = 329
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 105 VILDEADNMTSDAQQALRRIMEMYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L IA+ EGI+L + I + S+ ++R+AI
Sbjct: 165 MAERLRHIAKSEGIELRDDAIDLIYEVSEGDMRKAI 200
>gi|5263320|gb|AAD41422.1|AC007727_11 Similar to gb|M87339 replication factor C, 37-kDa subunit from Homo
sapiens and is a member of PF|00004 ATPases associated
with various cellular activities [Arabidopsis thaliana]
Length = 319
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ + I +EG+ L + ++ S+ +LR+AI
Sbjct: 179 MSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 214
>gi|119872170|ref|YP_930177.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
gi|150415670|sp|A1RSA2.1|RFCS1_PYRIL RecName: Full=Replication factor C small subunit 1; Short=RFC small
subunit 1; AltName: Full=Clamp loader small subunit 1
gi|119673578|gb|ABL87834.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
Length = 329
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRHL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ E L++IA+ EG+++ + I + S+ ++R+AI + + N
Sbjct: 165 MAERLKYIAKSEGVEVKEDAIDLIYELSEGDMRKAINILQVAAATN 210
>gi|452846354|gb|EME48287.1| hypothetical protein DOTSEDRAFT_147627 [Dothistroma septosporum
NZE10]
Length = 352
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCAILRYARLTDGQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L IA+ EG++ + +++ ++RQAI + + S + FV G +
Sbjct: 190 VVKRLYQIAKAEGVEYSDDGIAALVFSAEGDMRQAINNLQ-STHAGFGFVNGDNVF 244
>gi|448664377|ref|ZP_21684180.1| replication factor C small subunit [Haloarcula amylolytica JCM
13557]
gi|445775022|gb|EMA26036.1| replication factor C small subunit [Haloarcula amylolytica JCM
13557]
Length = 325
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +EGI+L + + + ++R+AI +A+
Sbjct: 174 VAEEIRNIAAEEGIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|168037225|ref|XP_001771105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677638|gb|EDQ64106.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 365
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E+Y + C+ SK+ P ++S CT + P
Sbjct: 135 VILDEADAMTKDAQFALRRVIEKYTKSTRFCLICNYASKIIPALQSRCTRFRFAPLDPAN 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV--EGQVILTG 117
+ E L ++ +QEG+ + I + +LR+A+ + S QM P + E + TG
Sbjct: 195 VTERLRYVIQQEGLDVTDGGLAAIVRLANGDLRKALNILQ-SAQMASPHLTEEAVYLCTG 253
Query: 118 --WEDDITNIATKIIEE 132
DI IA ++ E
Sbjct: 254 NPMPKDIEQIAYWLLNE 270
>gi|452825574|gb|EME32570.1| replication factor C [Galdieria sulphuraria]
Length = 354
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E++ + + F C+ V++ + P+ S C + Q
Sbjct: 118 IILDEADAITPDAQTALRRTMEQFSKITRFFLLCNYVTRVIDPLASRCAKFRFRSLPMQL 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
V+ L +I +QEGI + + + + +LR+AI + E++ Y G I
Sbjct: 178 QVDRLRYIVDQEGIMVSDDILQTLTSCCNGDLRRAIMTLESA----YCLARGSNI----T 229
Query: 120 DDITNIAT 127
D+I N T
Sbjct: 230 DEIINSVT 237
>gi|403342743|gb|EJY70695.1| Replication factor C subunit 5 [Oxytricha trifallax]
Length = 324
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL E D +++ A +R ++E+Y + F C+ VSK+ P ++S CT + P +
Sbjct: 107 VILDECDSMTSSAQFALRRIVEKYTKTTRFCFICNYVSKIIPALQSRCTRFRFGPLQTEN 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I+ L IAE E ++L AE I S ++R+ + E+
Sbjct: 167 ILPKLHEIAELENLRLDQDAAESIVKLSGGDMRKVLNVLES 207
>gi|326429974|gb|EGD75544.1| replication factor C 4 [Salpingoeca sp. ATCC 50818]
Length = 345
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+Y + + C+ +S++ +P+ S C + P S+
Sbjct: 131 IILDEADAMTAAAQSALRRTMEKYSNVTRFCLICNYISRIIEPLASRCAKFRFKPLSRDT 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+V L+ I ++E +Q ++ +I D ++RQAI +++ ++
Sbjct: 191 LVGRLQHIRDKEDVQCSDEVLARIIDLVDGDMRQAITFLQSASRL 235
>gi|156849229|ref|XP_001647495.1| hypothetical protein Kpol_1018p177 [Vanderwaltozyma polyspora DSM
70294]
gi|156118181|gb|EDO19637.1| hypothetical protein Kpol_1018p177 [Vanderwaltozyma polyspora DSM
70294]
Length = 350
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 134 IILDEADSMTADAQSALRRTMETYSNITRFCLICNYVTRIIDPLASRCSKFRFKALDETN 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMNY 106
++ L+F+A++E + + EKI + S +LR+AI + AS+ Y
Sbjct: 194 ALDRLKFVAQEENVNYKENVLEKILEISSGDLRRAITLLQSASKTSTY 241
>gi|84489225|ref|YP_447457.1| replication factor C small subunit [Methanosphaera stadtmanae DSM
3091]
gi|110287813|sp|Q2NH89.1|RFCS_METST RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|84372544|gb|ABC56814.1| RfcS [Methanosphaera stadtmanae DSM 3091]
Length = 321
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + P
Sbjct: 103 IFLDEVDNMTKDAQQALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFSPIKAAN 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I++ L++IA +EGI+ E I ++ ++R++I +AS
Sbjct: 163 IIKRLKYIASEEGIEAEQSALENIVYFTQGDMRKSINILQAS 204
>gi|357160682|ref|XP_003578842.1| PREDICTED: replication factor C subunit 4-like [Brachypodium
distachyon]
Length = 339
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S+
Sbjct: 118 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDV 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L Q ++ + +LR+AI +++ ++
Sbjct: 178 MTNRILHICHEEGLTLDAQALSTLSAICQGDLRRAITYLQSAARL 222
>gi|171185161|ref|YP_001794080.1| replication factor C small subunit [Pyrobaculum neutrophilum
V24Sta]
gi|170934373|gb|ACB39634.1| Replication factor C [Pyrobaculum neutrophilum V24Sta]
Length = 319
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS + +PI+S +++ P K
Sbjct: 104 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSGIIEPIQSRVVMVRFNPLPKDA 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
++ L +IAE EGI+ E I + ++ ++R+AI + +
Sbjct: 164 VIARLRYIAENEGIKASDDALETIFEFTQGDMRKAINALQ 203
>gi|257387186|ref|YP_003176959.1| replication factor C small subunit [Halomicrobium mukohataei DSM
12286]
gi|257169493|gb|ACV47252.1| Replication factor C [Halomicrobium mukohataei DSM 12286]
Length = 322
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 111 IFLDEADALTSDAQSALRRTMEQFSNNVRFIMSCNYSSQIIDPIQSRCAVFRFSPLGDEA 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + IA++EGI+L + + + ++R+AI +A+
Sbjct: 171 VEAEIRHIADEEGIELTDDGVDALVYAAGGDMRKAINGLQAA 212
>gi|443404662|ref|YP_007379001.1| replication factor C small subunit [Halovirus HVTV-1]
gi|441462173|gb|AGC34465.1| replication factor C small subunit [Halovirus HVTV-1]
Length = 327
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD+L+ DA +R ++E + + + F C+ +S++ PI+S C + P + +
Sbjct: 108 VFLDEADQLTKDAQTALRRIMEDHADVTRFFLSCNYLSQIIGPIQSRCAPFSISPLTDDD 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ ++ + +AE+EGI + + + + + R+ I S +A+ EG++ G
Sbjct: 168 LFQIGKNVAEEEGIAIEDDTLTLMVNAADGDARKLINSMQAA------VYEGEIDANGVN 221
Query: 120 DDITNIATKIIEE 132
++ + ++E+
Sbjct: 222 VVVSTVDDALVEQ 234
>gi|268576128|ref|XP_002643044.1| Hypothetical protein CBG22959 [Caenorhabditis briggsae]
Length = 353
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD ++ DA +R ++E+Y + V FC C+ ++ + P I+S CT + P +
Sbjct: 122 VILDEADAMTKDAQNALRRVIEKYT--DNVRFCIICNYLASIIPAIQSRCTRFRFAPLDQ 179
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
IV L+FI + EG+Q+ E + SK ++R I + +++
Sbjct: 180 SLIVPRLDFIVKSEGLQMTPDGREALLRVSKGDMRTVINTLQST 223
>gi|379005452|ref|YP_005261124.1| DNA polymerase III subunit gamma and tau [Pyrobaculum oguniense
TE7]
gi|375160905|gb|AFA40517.1| DNA polymerase III, gamma/tau subunits [Pyrobaculum oguniense TE7]
Length = 329
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 105 VILDEADNMTSDAQQALRRIMEMYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRGL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L IA+ EGI+L + I + S+ ++R+AI
Sbjct: 165 MAERLRHIAKSEGIELRDDAIDLIYEVSEGDMRKAI 200
>gi|296241869|ref|YP_003649356.1| replication factor C small subunit [Thermosphaera aggregans DSM
11486]
gi|296094453|gb|ADG90404.1| replication factor C small subunit [Thermosphaera aggregans DSM
11486]
Length = 325
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R L+E Y + + SK+ +PI+S V + P +++
Sbjct: 107 ILLDEADNMTADAQQALRRLMELYTASTRFILIANYPSKIIEPIQSRTAVFRFTPLKRED 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+VE L++I E ++ I + S+ ++R+AI +AS + VE + G
Sbjct: 167 VVERLKYICSNEKVKCHEDALNTIFELSEGDMRRAINILQASAALGEATVENVYKVVG 224
>gi|255558610|ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
gi|223540549|gb|EEF42116.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 342
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI + + ++
Sbjct: 179 MSSRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARL 223
>gi|282164500|ref|YP_003356885.1| replication factor C small subunit [Methanocella paludicola SANAE]
gi|282156814|dbj|BAI61902.1| replication factor C small subunit [Methanocella paludicola SANAE]
Length = 332
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ERY + C+ SK+ +PI+S C V + P ++
Sbjct: 116 IFLDEADALTSDAQSALRRTMERYTATCRFIISCNYSSKIIEPIQSRCAVYRFGPLGPKD 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + I + EGI++ + I ++ ++R+A+ + +++
Sbjct: 176 IETMARRIEKGEGIKITKDGLDAIIYVARGDMRRAVNALQSA 217
>gi|449523838|ref|XP_004168930.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E + + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEV 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ + + I +EG+ L + ++ S+ +LR+AI
Sbjct: 179 MSKRILHIGNEEGLSLDGEALSTLSSISQGDLRRAI 214
>gi|167390711|ref|XP_001739466.1| replication factor C subunit [Entamoeba dispar SAW760]
gi|165896845|gb|EDR24167.1| replication factor C subunit, putative [Entamoeba dispar SAW760]
Length = 539
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL E+DKL+ DA +R LE++ + F C++V + P I+S C ++ P S
Sbjct: 104 IILDESDKLTKDAQNALRRTLEQFSANCRFIFICNEVHLITPAIQSRCAKMRFGPLSPNA 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ +++E I +EG+++ + I + SK + R I + +A
Sbjct: 164 LTKIVENITTKEGMEIDDDAKKSIIEISKGDARSIINTLQA 204
>gi|392595637|gb|EIW84960.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 369
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 133 IILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSSS 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
L IA QE + + ++ + + D S +LR++I +++ +++
Sbjct: 193 TSNRLSHIAAQEHVDVSPEVIQALIDTSSGDLRRSITYLQSASRLS 238
>gi|58270226|ref|XP_572269.1| activator 1 41 kda subunit [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117646|ref|XP_772457.1| hypothetical protein CNBL0720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255071|gb|EAL17810.1| hypothetical protein CNBL0720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228527|gb|AAW44962.1| activator 1 41 kda subunit, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 363
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 132 IILDEADSMTQDAQSALRRIMETYSKITRFCLVCNYVTRIIEPLASRCSKFRFKPLEQGS 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E IAE EG+Q + I + + +LR+AI + +++++
Sbjct: 192 TRARMEMIAENEGVQTDPGVISLILELAGGDLRKAITYLQTAQRLH 237
>gi|405124075|gb|AFR98837.1| activator 1 41 kda subunit [Cryptococcus neoformans var. grubii
H99]
Length = 363
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 132 IILDEADSMTQDAQSALRRIMETYSKITRFCLVCNYVTRIIEPLASRCSKFRFKPLEQGS 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E IAE EG+Q + I + + +LR+AI + +++++
Sbjct: 192 TRARMEMIAENEGVQTDPGVISLILELAGGDLRKAITYLQTAQRLH 237
>gi|397772363|ref|YP_006539909.1| Replication factor C [Natrinema sp. J7-2]
gi|448342243|ref|ZP_21531195.1| replication factor C small subunit 2 [Natrinema gari JCM 14663]
gi|397681456|gb|AFO55833.1| Replication factor C [Natrinema sp. J7-2]
gi|445626234|gb|ELY79583.1| replication factor C small subunit 2 [Natrinema gari JCM 14663]
Length = 334
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + L P+ +E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSLPAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREGVDYDDDGLEFVAGYANGNLRQAI 218
>gi|311977902|ref|YP_003987022.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|82050828|sp|Q5UQ72.1|RFCS4_MIMIV RecName: Full=Putative replication factor C small subunit L510;
Short=RFC small subunit L510; AltName: Full=Clamp loader
small subunit L510
gi|55417124|gb|AAV50774.1| putative replication factor C subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204876|gb|ADO18677.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|339061447|gb|AEJ34751.1| putative replication factor C subunit [Acanthamoeba polyphaga
mimivirus]
gi|351737669|gb|AEQ60704.1| putative replication factor C small subunit [Acanthamoeba
castellanii mamavirus]
gi|398257335|gb|EJN40943.1| putative replication factor C subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 363
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ +A +R ++E+Y + F C+ ++K+ IKS C+ + S +
Sbjct: 116 IILDEADSMTDEAQDALRVIIEQYSTATRFCFICNYITKITDAIKSRCSSVYFKKLSDEC 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+VE L I+ +E ++LP + I D S ++R+AI
Sbjct: 176 MVEKLNDISLKESMELPKNILHTIIDVSNGDMRKAI 211
>gi|56754473|gb|AAW25424.1| SJCHGC05804 protein [Schistosoma japonicum]
Length = 335
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E Y + C+D SKL +PI+S C V++ + +
Sbjct: 122 IILDEADSMTEGAQQALRRIMELYSRTTRFALACNDSSKLIEPIQSRCAVLRYTRLTSAQ 181
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
I+ L ++ EG+ + E I + ++RQA+ + +++ Q
Sbjct: 182 IMARLLEVSHSEGVSYTEEGLEAIVFTADGDMRQALNNLQSTYQ 225
>gi|363750506|ref|XP_003645470.1| hypothetical protein Ecym_3150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889104|gb|AET38653.1| Hypothetical protein Ecym_3150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 350
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + P
Sbjct: 135 IILDEADSMTADAQSALRRTMETYSNVTRFCLICNYVTRIIDPLASRCSKFRFKPLDNSN 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ L++IA +E + L +KI D S+ +LR+ I
Sbjct: 195 ALTRLQYIASEESLTLADGALDKILDISEGDLRKGI 230
>gi|303391058|ref|XP_003073759.1| DNA replication factor C small subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302907|gb|ADM12399.1| DNA replication factor C small subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 354
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I++ A++LS +A +R +E Y + +V C+++S+L +PI+S C +++ S ++
Sbjct: 132 IVITSAEELSLEAQAALRRTIEMYSNVLRVVLMCNELSRLIEPIRSRCFFLRIPGFSDED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
I+ + I E+E +P + E+I S+ N+R+A+
Sbjct: 192 IMSNMRRILEKENYTVPEETLEEICRESEGNMRRAL 227
>gi|242010739|ref|XP_002426116.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212510163|gb|EEB13378.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 338
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ A +R +E Y + F C+D SK+ +P++S C V++ +E
Sbjct: 121 IVLDEADSMTDGAQQALRRTMEMYSQTTRFAFACNDSSKIIEPLQSRCAVLRFTKLKDEE 180
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
I++ L I E E I + E + +++ +LRQA+ + +++
Sbjct: 181 ILKKLLQICESEQISYTNDGLEAVIFSAQGDLRQALNNLQSTHN 224
>gi|67470640|ref|XP_651283.1| replication factor C familiy protein [Entamoeba histolytica
HM-1:IMSS]
gi|56468001|gb|EAL45896.1| replication factor C familiy protein [Entamoeba histolytica
HM-1:IMSS]
gi|407035358|gb|EKE37658.1| replication factor C familiy protein [Entamoeba nuttalli P19]
gi|449710429|gb|EMD49506.1| replication factor C familiy protein, putative [Entamoeba
histolytica KU27]
Length = 325
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL E+DKL+ DA +R LE++ + F C++V + P I+S C ++ P S
Sbjct: 104 IILDESDKLTKDAQNALRRTLEQFSANCRFIFICNEVHLITPAIQSRCAKMRFGPLSPDA 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ +++E I +EG+++ + I + SK + R I + +A
Sbjct: 164 LTKIVENITMKEGMEIDEDAKKSIIEISKGDARSIINTLQA 204
>gi|430811901|emb|CCJ30656.1| unnamed protein product [Pneumocystis jirovecii]
Length = 345
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ A +R ++E Y + F C+ +K+ +PI+S C +++ + Q+
Sbjct: 125 IVLDEADSMTPGAQQALRRIMEIYSNTTRFAFICNQSNKIIEPIQSRCAILRYSRLTDQQ 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I++ L I + E IQ + +S+ ++RQAI + + S M + FV+G+ +
Sbjct: 185 ILQRLLEICKIENIQYNDDGLSALIFSSEGDMRQAINNLQ-STVMGFGFVKGENVF---- 239
Query: 120 DDITNIATKIIEEQSP 135
K++++ SP
Sbjct: 240 --------KVVDQPSP 247
>gi|403221417|dbj|BAM39550.1| replication factor C subunit [Theileria orientalis strain Shintoku]
Length = 351
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEI 60
+L +AD L+ +A +R +E ++F +S++ P ++S C +++ + EI
Sbjct: 132 LLEDADTLTQEAQAALRRTMETCVKNARMFLHVRQLSRIMPPLRSRCLCVRVRSHTNAEI 191
Query: 61 VEVLEFIAEQEGIQLPHQLAE----KIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
V++L I E I P Q ++ IA++S NLR++I + EA + +E + +
Sbjct: 192 VDILRGICNAEDIT-PSQASDSMLMNIAESSNRNLRRSILTLEAVAMGGFT-LETKNFMM 249
Query: 117 GWEDDITNIATKIIEEQSP 135
WE +I I ++ Q+P
Sbjct: 250 PWEKNINQIVQSVLSNQTP 268
>gi|406607522|emb|CCH40993.1| Replication factor C subunit 2 [Wickerhamomyces ciferrii]
Length = 316
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ ++++ P+ S C+ + P +
Sbjct: 83 IILDEADSMTADAQSALRRTMETYSGVTRFCLICNYITRIIDPLASRCSKFRFKPLDNND 142
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ L+ I +QE I+L + E++ + +LR+AI +++ +++
Sbjct: 143 ALLRLQHIQQQENIRLEDGVLEEVLKIASGDLRKAITFLQSAARLH 188
>gi|154341867|ref|XP_001566885.1| putative replication factor C, subunit 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064210|emb|CAM40408.1| putative replication factor C, subunit 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 296
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E + + + C+ VS++ PI S C + P K
Sbjct: 84 IILDEADALLPDAQGALRRMMEDFSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVKSA 143
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ +E++A+ EGI L + + S +LR AI +++++ N
Sbjct: 144 LYHRIEYVAQAEGITLSPASLQALDTVSGGDLRLAIMHLQSAQKAN 189
>gi|366988537|ref|XP_003674035.1| hypothetical protein NCAS_0A10960 [Naumovozyma castellii CBS 4309]
gi|342299898|emb|CCC67654.1| hypothetical protein NCAS_0A10960 [Naumovozyma castellii CBS 4309]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERY-KGLNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+++ EA+ L+ DA +R +E+Y + + + C S S + PI+S C ++++ P E
Sbjct: 138 VVINEANSLTRDAQAALRRTMEKYSRNIRLIMLCDSMSSIISPIRSRCLMVRVPAPVNNE 197
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEA 100
IV +L + E E I L + + +IA NLR A+ E+
Sbjct: 198 IVSILGNVVEMEKINLENGSILNQIARECNGNLRTALLMLES 239
>gi|73669094|ref|YP_305109.1| replication factor C small subunit [Methanosarcina barkeri str.
Fusaro]
gi|110287811|sp|Q46C63.1|RFCS_METBF RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|72396256|gb|AAZ70529.1| replication factor C small subunit [Methanosarcina barkeri str.
Fusaro]
Length = 334
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +ER+ + C+ S++ +PI+S C V + S +
Sbjct: 111 IFLDEADALTSDAQSALRRTMERFSNNCRFILSCNYSSRIIEPIQSRCAVFRFRRLSDEA 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + LE+IA+ + + + E + S+ ++R+A+ S +A+
Sbjct: 171 IRKRLEYIAKDQVLSITEDGYEALVYVSQGDMRKAVNSLQAA 212
>gi|430814613|emb|CCJ28174.1| unnamed protein product [Pneumocystis jirovecii]
Length = 967
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ ++++ P+ S C+ Q P S Q
Sbjct: 127 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYITRIIGPLASRCSKFQFKPLSFQH 186
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+E L++IA E ++ + E + + S +LR+AI +++ ++
Sbjct: 187 SMEKLKYIASCENVKYDKGVIEMLIEQSNGDLRKAITFLQSAARL 231
>gi|448611174|ref|ZP_21661808.1| replication factor C small subunit [Haloferax mucosum ATCC
BAA-1512]
gi|445743606|gb|ELZ95087.1| replication factor C small subunit [Haloferax mucosum ATCC
BAA-1512]
Length = 379
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 167 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 226
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IAE E I+L + + + ++R+AI S +A+
Sbjct: 227 IADQTRDIAETEEIELTEDGLDALVYAAGGDMRRAINSLQAA 268
>gi|110590957|pdb|2CHG|A Chain A, Replication Factor C Domains 1 And 2
gi|110590958|pdb|2CHG|B Chain B, Replication Factor C Domains 1 And 2
gi|110590959|pdb|2CHG|C Chain C, Replication Factor C Domains 1 And 2
gi|110590960|pdb|2CHG|D Chain D, Replication Factor C Domains 1 And 2
Length = 226
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + C+ VS++ +PI+S C V + P K+
Sbjct: 106 IFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEA 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + L I E+EG+++ E + S + R+AI + + +
Sbjct: 166 MKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGA 207
>gi|409046196|gb|EKM55676.1| hypothetical protein PHACADRAFT_144345 [Phanerochaete carnosa
HHB-10118-sp]
Length = 368
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 135 IILDEADSMTQDAQAALRRIMENYVRITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNAS 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE-ASRQMN 105
L IA E I +P + + + + S +LR++I + ASR N
Sbjct: 195 TSARLAAIASAENIHIPDSVIDTLINTSHGDLRRSITYLQSASRLAN 241
>gi|70606693|ref|YP_255563.1| replication factor C small subunit [Sulfolobus acidocaldarius DSM
639]
gi|449066916|ref|YP_007433998.1| replication factor C small subunit [Sulfolobus acidocaldarius N8]
gi|449069188|ref|YP_007436269.1| replication factor C small subunit [Sulfolobus acidocaldarius
Ron12/I]
gi|73914011|sp|Q4JAB0.1|RFCS_SULAC RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|68567341|gb|AAY80270.1| replication factor C [Sulfolobus acidocaldarius DSM 639]
gi|449035424|gb|AGE70850.1| replication factor C small subunit [Sulfolobus acidocaldarius N8]
gi|449037696|gb|AGE73121.1| replication factor C small subunit [Sulfolobus acidocaldarius
Ron12/I]
Length = 325
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ DA +R +E Y + C+ +SK ++PI+S + + P K++
Sbjct: 106 ILLDEADNMTADAQQALRRTMELYTETTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L IA+ E ++ + E I D ++ ++R+AI +A+
Sbjct: 166 VVNRLIQIAKNEKVEFDPKGIETIFDITQGDMRKAINVIQAA 207
>gi|403217005|emb|CCK71500.1| hypothetical protein KNAG_0H00850 [Kazachstania naganishii CBS
8797]
Length = 357
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+++ EA L+ DA +R +E+Y ++ C +S + PI+S C +I+ P+ E
Sbjct: 138 VVINEAHSLTRDAQAALRRTMEKYSRNIRLIMICDSMSPIIAPIRSRCMLIRCPAPTDDE 197
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEASR-------QMNYPFVEG 111
+++L +A +E +++ + +KI + S NLR A E+ +M+ P ++
Sbjct: 198 TIKILAEVASKENVKVESGSVFQKIVEQSSGNLRVATLMLESMSLCNEMQLKMSTPILKP 257
Query: 112 QVILTGWEDDITNIATKIIEEQS 134
W I+NI K+ E++
Sbjct: 258 D-----WMVVISNIGVKVTRERN 275
>gi|449018110|dbj|BAM81512.1| replication factor C subunit 5 [Cyanidioschyzon merolae strain 10D]
Length = 366
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD +++ A +R ++E+Y + + FC C+ +K+ P I+S CT + P
Sbjct: 120 VILDEADAMTSAAQAALRRIMEKYT--SNIRFCLICNYANKIIPAIQSRCTRFRFQPVPV 177
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
++++ LE+IA++EG+ + + +A ++ ++R+AI
Sbjct: 178 AQMIQRLEYIADREGVPVDRAAFDALARIAQGDMRRAI 215
>gi|126179196|ref|YP_001047161.1| replication factor C small subunit [Methanoculleus marisnigri JR1]
gi|150415672|sp|A3CUX9.1|RFCS_METMJ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|125861990|gb|ABN57179.1| replication factor C small subunit [Methanoculleus marisnigri JR1]
Length = 322
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ SK+ PI+S C + + P ++
Sbjct: 107 LFLDEADALTTDAQAALRRTMETYARTCRFILSCNYSSKIIDPIQSRCAIYRFRPLDREA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++E IA EG+ + + I + ++R+AI + + +
Sbjct: 167 VIEETRRIAAAEGLTVTEGALDAIVYVASGDMRKAINALQGA 208
>gi|219852692|ref|YP_002467124.1| replication factor C small subunit [Methanosphaerula palustris
E1-9c]
gi|219546951|gb|ACL17401.1| Replication factor C [Methanosphaerula palustris E1-9c]
Length = 326
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ SK+ PI+S C + + P + +
Sbjct: 108 LFLDEADALTTDAQAALRRTMETYSRGCRFILSCNYSSKIIDPIQSRCAIYRFRPLTPEA 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E + IA +EGI + E I ++ ++R+AI + + +
Sbjct: 168 ISEEIGKIAGKEGITVTPDAIEAIVYIAQGDMRKAINALQGA 209
>gi|374325546|ref|YP_005083743.1| replication factor C small subunit [Pyrobaculum sp. 1860]
gi|356640812|gb|AET31491.1| replication factor C small subunit [Pyrobaculum sp. 1860]
Length = 319
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + +S + +PI+S + + P K+
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYISGIIEPIQSRTVMFRFSPLPKEA 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ L +IAE EG+++ E I + ++ ++R+AI + +
Sbjct: 165 VFTRLRYIAENEGVKISDDALETIYEFTQGDMRRAINALQ 204
>gi|307205986|gb|EFN84112.1| Replication factor C subunit 4 [Harpegnathos saltator]
Length = 360
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E+ + C+ +S++ +PI S CT + P S ++
Sbjct: 140 IILDEADSMTGAAQTALRRIMEKEAHSTRFCLVCNYLSRIIKPITSRCTKFRFKPLSDEK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ LE+I +E + + EKI S +LRQA+
Sbjct: 200 SIARLEYICNEENLMANRNVLEKIVAASGGDLRQAV 235
>gi|41614964|ref|NP_963462.1| replication factor C small subunit [Nanoarchaeum equitans Kin4-M]
gi|42559422|sp|P60374.1|RFCS_NANEQ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|40068688|gb|AAR39023.1| NEQ170 [Nanoarchaeum equitans Kin4-M]
Length = 322
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R ++E+Y + C+ SK ++PI+S TV + P K+
Sbjct: 103 VFLDEADALTRDAQQALRRIMEKYSQSTRFILSCNYFSKIIEPIQSRVTVFKFKPLEKEA 162
Query: 60 IVEVLEFIAEQEGIQLPH--QLAEKIADNSKNNLRQAIRSFEASRQMN 105
E++ I + EG+ L + ++ + D ++ +LR+AI +A+ M+
Sbjct: 163 FRELINRIVKGEGLILENEDEIINALYDIAEGDLRKAINILQAAAMMS 210
>gi|11499642|ref|NP_070884.1| replication factor C small subunit [Archaeoglobus fulgidus DSM
4304]
gi|42559325|sp|O28219.1|RFCS_ARCFU RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
AltName: Full=afRFC small subunit; Short=afRFCsm
gi|110590966|pdb|2CHQ|A Chain A, Replication Factor C Adpnp Complex
gi|110590967|pdb|2CHQ|B Chain B, Replication Factor C Adpnp Complex
gi|110590968|pdb|2CHQ|C Chain C, Replication Factor C Adpnp Complex
gi|110590969|pdb|2CHV|A Chain A, Replication Factor C Adpnp Complex
gi|110590970|pdb|2CHV|B Chain B, Replication Factor C Adpnp Complex
gi|110590971|pdb|2CHV|C Chain C, Replication Factor C Adpnp Complex
gi|110590972|pdb|2CHV|D Chain D, Replication Factor C Adpnp Complex
gi|110590973|pdb|2CHV|E Chain E, Replication Factor C Adpnp Complex
gi|110590974|pdb|2CHV|F Chain F, Replication Factor C Adpnp Complex
gi|2648471|gb|AAB89191.1| activator 1, replication factor C, 35 KD subunit [Archaeoglobus
fulgidus DSM 4304]
Length = 319
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + C+ VS++ +PI+S C V + P K+
Sbjct: 106 IFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEA 165
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + L I E+EG+++ E + S + R+AI + + +
Sbjct: 166 MKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGA 207
>gi|448467531|ref|ZP_21599543.1| replication factor C small subunit [Halorubrum kocurii JCM 14978]
gi|445812407|gb|EMA62401.1| replication factor C small subunit [Halorubrum kocurii JCM 14978]
Length = 327
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDAA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IA EGI++ + + + ++R+AI S +A+
Sbjct: 176 VAAQTREIAAAEGIEVTDAGVDALVYAADGDMRRAINSLQAA 217
>gi|169854167|ref|XP_001833760.1| replication factor C [Coprinopsis cinerea okayama7#130]
gi|116505157|gb|EAU88052.1| replication factor C [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 143 IILDEADSMTQDAQGALRRIMETYAKITRFCLVCNYVTRIIEPLASRCSKFRFTPLDPDS 202
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
L +IA+ E I + + + + S +LR+AI +++ L G
Sbjct: 203 ASARLSYIAQAENIDISKPVIDALISTSHGDLRRAIT-----------YLQSAARLAGSS 251
Query: 120 DDITNIATKIIEE 132
D T I + I+E
Sbjct: 252 DPPTPILPRDIQE 264
>gi|21227923|ref|NP_633845.1| replication factor C small subunit [Methanosarcina mazei Go1]
gi|42559488|sp|Q8PVY4.1|RFCS_METMA RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|20906344|gb|AAM31517.1| replication factor C subunit [Methanosarcina mazei Go1]
Length = 338
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ SK+ +PI+S C V + S +
Sbjct: 115 IFLDEADALTSDAQSALRRTMEKFSSNCRFILSCNYSSKIIEPIQSRCAVYRFRRLSDKA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E LE+IA+++ + + E + ++ ++R+A+ S +A+
Sbjct: 175 IRERLEYIAKEQDLSITDGGYEALIYVAQGDMRKAVNSLQAA 216
>gi|380016014|ref|XP_003691988.1| PREDICTED: replication factor C subunit 4-like [Apis florea]
Length = 357
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P + +
Sbjct: 140 IILDEADSMTGAAQAALRRTMEKESHSTRFCLICNYVSRIIEPLTSRCTKFRFKPLGENK 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
I+E LE+I ++E +++ + KI + S +LR+AI ++ ++ +E
Sbjct: 200 IIERLEYICKEEDLKVEKPVLLKIVEVSGGDLRRAITCLQSITKLKGKGIE 250
>gi|374327674|ref|YP_005085874.1| replication factor C small subunit [Pyrobaculum sp. 1860]
gi|356642943|gb|AET33622.1| replication factor C small subunit [Pyrobaculum sp. 1860]
Length = 329
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C + + P K
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAIFRFSPMPKNL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L IA+ EG++L + I + S+ ++R+AI
Sbjct: 165 MAERLRLIAKSEGVELRDDAIDIIYELSEGDMRKAI 200
>gi|401827719|ref|XP_003888152.1| replication factor C small subunit [Encephalitozoon hellem ATCC
50504]
gi|392999352|gb|AFM99171.1| replication factor C small subunit [Encephalitozoon hellem ATCC
50504]
Length = 354
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I + A++L+ +A +R +E Y + +V C+++S+L +PI+S C +++ S +
Sbjct: 132 IAITSAEELTLEAQAALRRTIEMYSSVLRVVLICNELSRLIEPIRSRCFFLRIPSFSDGD 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA------SRQMNYPFVEGQV 113
I+ + I+E+E +P + E+I S+ N+R+A+ E ++ G+
Sbjct: 192 IMSNMCMISEKENYAVPKERLEEICRASEGNMRRALCILELLCFNMNDKETKRLKDNGKD 251
Query: 114 ILTGWEDDITNIATKIIEEQSPK 136
+ WE +T I + I Q+P+
Sbjct: 252 LRLDWELAVTGITSIIKSNQTPE 274
>gi|254567163|ref|XP_002490692.1| Replication factor C [Komagataella pastoris GS115]
gi|238030488|emb|CAY68412.1| Replication factor C [Komagataella pastoris GS115]
gi|328351077|emb|CCA37477.1| Replication factor C subunit 5 [Komagataella pastoris CBS 7435]
Length = 369
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+I+ EA+ L+ DA +R +E+Y ++ C+ +S ++PIKS +I++ P+ +E
Sbjct: 136 VIINEAELLTRDAQAALRRTMEKYSANIRLVLVCNSISSIIEPIKSRTLLIRVAAPTDEE 195
Query: 60 IVEVLE------------FIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYP 107
+ V E F A++ Q Q+ KIA + +NLR + EA N P
Sbjct: 196 MGSVFEKVLRDQPEVAKSFPADETERQ---QIYSKIAKVTDHNLRTGLLLLEALYSYN-P 251
Query: 108 FVEGQ--VILTGWEDDITNIATKIIEEQS 134
+ + +I+ WE+ I +A I+ E++
Sbjct: 252 SITTKTPMIMPDWENVIKKLAIGIVTERT 280
>gi|224084964|ref|XP_002307456.1| predicted protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P ++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I +EG+ L + ++ S+ +LR+AI + + ++
Sbjct: 179 MSNRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARL 223
>gi|448471999|ref|ZP_21601026.1| replication factor C small subunit [Halorubrum aidingense JCM
13560]
gi|445820426|gb|EMA70249.1| replication factor C small subunit [Halorubrum aidingense JCM
13560]
Length = 327
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDAA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IA EGI++ + + + ++R+AI S +A+
Sbjct: 176 VAGQTREIAAAEGIEVTDAGVDALVYAADGDMRRAINSLQAA 217
>gi|84997984|ref|XP_953713.1| replication factor C subunit [Theileria annulata]
gi|65304710|emb|CAI73035.1| replication factor C subunit, putative [Theileria annulata]
Length = 351
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEIVEV 63
+AD L+ +A +R +E Y ++F +S++ P ++S C I++ + EIV++
Sbjct: 135 DADTLTQEAQAALRRTMETYIKNARMFLHVRQLSRIMPPLRSRCLCIRVRSHTNDEIVQI 194
Query: 64 LEFIAEQEGI---QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWED 120
L I E I Q Q+ IA++SK NLR++I + E + ++ + + WE
Sbjct: 195 LRKICNSEDITPSQASDQMLRNIAESSKRNLRRSILTLETIAMGGFT-LQTKNFMMPWEK 253
Query: 121 DIT 123
+IT
Sbjct: 254 NIT 256
>gi|358054157|dbj|GAA99693.1| hypothetical protein E5Q_06396 [Mixia osmundae IAM 14324]
Length = 446
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +PI S C+ + P
Sbjct: 201 IILDEADSMTQDAQSALRRIMENYSKITRFCLICNYVTRIIEPITSRCSKFRFKPLDTTN 260
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE++ ++E +Q + + + S+ +LR+AI +++ ++
Sbjct: 261 TQKRLEYVCQKEEVQCGEESVQALIRCSEGDLRRAITYLQSASRL 305
>gi|448302330|ref|ZP_21492312.1| replication factor C small subunit 2 [Natronorubrum tibetense GA33]
gi|445581559|gb|ELY35911.1| replication factor C small subunit 2 [Natronorubrum tibetense GA33]
Length = 334
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + PS E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVSFRAPSSPE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ + E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREGVAYENDGLEFVAGYANGNLRQAI 218
>gi|433431944|ref|ZP_20407710.1| replication factor C small subunit [Haloferax sp. BAB2207]
gi|432193760|gb|ELK50452.1| replication factor C small subunit [Haloferax sp. BAB2207]
Length = 327
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 IAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|322797318|gb|EFZ19436.1| hypothetical protein SINV_09794 [Solenopsis invicta]
Length = 353
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R ++E+ + C+ +S++ +PI S CT + P + ++
Sbjct: 173 VILDEADSMTGAAQTALRRIMEKESHSTRFCLVCNYLSRIIKPIASRCTKFRFKPLTDEK 232
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ LE+I +E ++ + EKI S +LRQA+
Sbjct: 233 SIARLEYICNEENLKADRSVLEKIVQASGGDLRQAV 268
>gi|229582086|ref|YP_002840485.1| replication factor C small subunit [Sulfolobus islandicus
Y.N.15.51]
gi|228012802|gb|ACP48563.1| Replication factor C [Sulfolobus islandicus Y.N.15.51]
Length = 330
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ +PI+S + + P K++
Sbjct: 109 VLLDEADNMTADAQQALRRTMELYTENTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L +IA+ E + + E I D + ++R++I +A+
Sbjct: 169 VVNRLVYIAKNEKAEYDQKALETIYDITMGDMRKSINILQAA 210
>gi|448573535|ref|ZP_21641018.1| replication factor C small subunit [Haloferax lucentense DSM 14919]
gi|445718441|gb|ELZ70131.1| replication factor C small subunit [Haloferax lucentense DSM 14919]
Length = 327
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 IAEQVRDIATAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|292654383|ref|YP_003534280.1| replication factor C small subunit [Haloferax volcanii DS2]
gi|448293928|ref|ZP_21484030.1| replication factor C small subunit [Haloferax volcanii DS2]
gi|448597682|ref|ZP_21654607.1| replication factor C small subunit [Haloferax alexandrinus JCM
10717]
gi|291370302|gb|ADE02529.1| replication factor C small subunit [Haloferax volcanii DS2]
gi|445569321|gb|ELY23895.1| replication factor C small subunit [Haloferax volcanii DS2]
gi|445739143|gb|ELZ90652.1| replication factor C small subunit [Haloferax alexandrinus JCM
10717]
Length = 327
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 IAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|227827646|ref|YP_002829426.1| replication factor C small subunit [Sulfolobus islandicus M.14.25]
gi|229584850|ref|YP_002843352.1| replication factor C small subunit [Sulfolobus islandicus M.16.27]
gi|238619814|ref|YP_002914640.1| replication factor C small subunit [Sulfolobus islandicus M.16.4]
gi|385773316|ref|YP_005645882.1| replication factor C [Sulfolobus islandicus HVE10/4]
gi|385775948|ref|YP_005648516.1| replication factor C [Sulfolobus islandicus REY15A]
gi|227459442|gb|ACP38128.1| Replication factor C [Sulfolobus islandicus M.14.25]
gi|228019900|gb|ACP55307.1| Replication factor C [Sulfolobus islandicus M.16.27]
gi|238380884|gb|ACR41972.1| Replication factor C [Sulfolobus islandicus M.16.4]
gi|323474696|gb|ADX85302.1| Replication factor C [Sulfolobus islandicus REY15A]
gi|323477430|gb|ADX82668.1| Replication factor C [Sulfolobus islandicus HVE10/4]
Length = 330
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ +PI+S + + P K++
Sbjct: 109 VLLDEADNMTADAQQALRRTMELYTENTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L +IA+ E + + E I D + ++R++I +A+
Sbjct: 169 VVNRLVYIAKNEKAEYDQKALETIYDITMGDMRKSINILQAA 210
>gi|227830342|ref|YP_002832122.1| replication factor C small subunit [Sulfolobus islandicus L.S.2.15]
gi|229579159|ref|YP_002837557.1| replication factor C small subunit [Sulfolobus islandicus
Y.G.57.14]
gi|284997767|ref|YP_003419534.1| replication factor C [Sulfolobus islandicus L.D.8.5]
gi|227456790|gb|ACP35477.1| Replication factor C [Sulfolobus islandicus L.S.2.15]
gi|228009873|gb|ACP45635.1| Replication factor C [Sulfolobus islandicus Y.G.57.14]
gi|284445662|gb|ADB87164.1| Replication factor C [Sulfolobus islandicus L.D.8.5]
Length = 330
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ +PI+S + + P K++
Sbjct: 109 VLLDEADNMTADAQQALRRTMELYTENTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L +IA+ E + + E I D + ++R++I +A+
Sbjct: 169 VVNRLVYIAKNEKAEYDQKALETIYDITMGDMRKSINILQAA 210
>gi|448825607|ref|YP_007418538.1| putative replication factor C small subunit [Megavirus lba]
gi|444236792|gb|AGD92562.1| putative replication factor C small subunit [Megavirus lba]
Length = 364
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ +A +R ++E+Y + F C+ +SK+ IKS CT I +
Sbjct: 118 IILDEADSMTDEAQDALRVIIEQYSTTTRFCFICNYISKITDAIKSRCTAIYFKKLDDEC 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+++ L+ I+ +E ++L +++ I D S ++R+AI
Sbjct: 178 MIDKLKEISTKESMKLSNEILSTIIDVSNGDMRKAI 213
>gi|371943985|gb|AEX61813.1| putative replication factor C small subunit [Megavirus courdo7]
gi|425701544|gb|AFX92706.1| putative replication factor C small subunit [Megavirus courdo11]
Length = 364
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ +A +R ++E+Y + F C+ +SK+ IKS CT I +
Sbjct: 118 IILDEADSMTDEAQDALRVIIEQYSTTTRFCFICNYISKITDAIKSRCTAIYFKKLDDEC 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+++ L+ I+ +E ++L +++ I D S ++R+AI
Sbjct: 178 MIDKLKEISTKESMKLSNEILSTIIDVSNGDMRKAI 213
>gi|342183622|emb|CCC93102.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 290
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S+DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSSDAQAALRRIIEKYT--RNVRFCIVCNHINKIIPALQSRCTRFRFAPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
++ L FIA++E I + S ++R+ + + +AS E V T
Sbjct: 187 AAMLPRLAFIAQEESIPFTNDGLVAAFRLSNGDMRRCLNTLQASAMSTGEITEESVYRT 245
>gi|294846008|gb|ADF43166.1| RFC4m [Chlamydomonas reinhardtii]
Length = 332
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E Y + + F C+ VS++ +P+ S C + P
Sbjct: 112 LILDEADSMTQDAQNALRRTMETYSRVTRFVFICNYVSRIIEPLASRCAKFRFKPLQPAI 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+ +E I E+E + L + ++ S +LR+AI + +++ ++ V+ +L
Sbjct: 172 MAGRIEHICERESVTLGPGALDTLSAVSGGDLRRAINTLQSAARLGAGHVDRATLL 227
>gi|432330756|ref|YP_007248899.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
gi|432137465|gb|AGB02392.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
Length = 322
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ SK+ PI+S C + + P +
Sbjct: 107 LFLDEADALTTDAQAALRRTMESYAQTCRFILSCNYSSKIIDPIQSRCAIYRFKPLGPEA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
+ E + IA +EG+ + + I ++ ++R+AI + + + +N E +V
Sbjct: 167 VREEVRRIASREGLTITDGAMDAIVYIAQGDMRKAINALQGAAIINPAIDEKRV 220
>gi|323451834|gb|EGB07710.1| hypothetical protein AURANDRAFT_59087 [Aureococcus anophagefferens]
Length = 313
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A MR +E + G + C+ SK+ +PI+S C +++ S +E
Sbjct: 103 VILDEADSMTAAAQQAMRRTMELFSGTTRFALACNTSSKISEPIQSRCAILRFTRLSDKE 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+++ L + EG+ E + ++ ++R A+ + + S + V+ Q + +
Sbjct: 163 LLKRLTHVCGAEGVAATDGGLEALIFTAEGDMRNALNNLQ-STHSGFGAVDEQSVFKVCD 221
Query: 120 DDITNIATKIIEE 132
++A KI+++
Sbjct: 222 QPHPHVARKILDD 234
>gi|397780149|ref|YP_006544622.1| Replication factor C small subunit [Methanoculleus bourgensis MS2]
gi|396938651|emb|CCJ35906.1| Replication factor C small subunit Short=RFC small subunit
[Methanoculleus bourgensis MS2]
Length = 324
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ SK+ PI+S C + + P ++
Sbjct: 109 LFLDEADALTTDAQAALRRTMETYARTCRFILSCNYSSKIIDPIQSRCAIYRFRPLDREA 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++E + IA EG+ + + I + ++R+AI + + +
Sbjct: 169 VIEEITRIAAIEGLTVTEGALDAIVYVASGDMRKAINALQGA 210
>gi|408383246|ref|ZP_11180783.1| replication factor C small subunit [Methanobacterium formicicum DSM
3637]
gi|407814028|gb|EKF84666.1| replication factor C small subunit [Methanobacterium formicicum DSM
3637]
Length = 321
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + P +
Sbjct: 103 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFAPIKGHQ 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
++E LE IA+ E + E I ++ ++R+A+ +++ M E
Sbjct: 163 VIERLEIIAKAENVNYAPGTLESIVYFAEGDMRRAVNILQSTASMGEEITE 213
>gi|399219086|emb|CCF75973.1| unnamed protein product [Babesia microti strain RI]
Length = 340
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R +E Y + + F C+ + K + P+ S C++ + P +KQ
Sbjct: 127 VILDEADMMTSDAQAALRRAIENYSTITRFIFICNYIYKIIDPLCSRCSLQRFQPIAKQA 186
Query: 60 IVEVLEFIAEQEGI-QLPHQLAEKIADNSKNNLRQAI 95
+ L FI EQE I ++ E + S+ +LR++I
Sbjct: 187 QISRLVFICEQEKISSFTNEAMEALVRVSQGDLRRSI 223
>gi|396082271|gb|AFN83881.1| DNA replication factor C small subunit [Encephalitozoon romaleae
SJ-2008]
Length = 354
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ + A++L+ +A +R +E Y + +V C+++S+L +P++S C +++ S ++
Sbjct: 132 VAITSAEELTLEAQAALRRTIEMYSSVLRVVLVCNELSRLIEPVRSRCFFLRIPGFSNED 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE------ASRQMNYPFVEGQV 113
I+ + I+E+E +P + E+I S+ N+R+A+ E ++ P + +
Sbjct: 192 IISNMCRISEKENYAIPKEKLEEICKESEGNMRRALCILELFCFNMIDKETKRPKINVKD 251
Query: 114 ILTGWEDDITNIATKIIEEQSP 135
+ WE + I++ + Q+P
Sbjct: 252 LKLDWELMVMGISSIVKSNQTP 273
>gi|15897670|ref|NP_342275.1| replication factor C small subunit [Sulfolobus solfataricus P2]
gi|284174995|ref|ZP_06388964.1| replication factor C small subunit [Sulfolobus solfataricus 98/2]
gi|384434284|ref|YP_005643642.1| replication factor C [Sulfolobus solfataricus 98/2]
gi|42559539|sp|Q9UXF5.1|RFCS_SULSO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
AltName: Full=SsoRFC small subunit
gi|6015708|emb|CAB57535.1| activator 1, replication factor C, small subunit [Sulfolobus
solfataricus P2]
gi|13813941|gb|AAK41065.1| Activator 1, replication factor C, small subunit (rfc) [Sulfolobus
solfataricus P2]
gi|261602438|gb|ACX92041.1| Replication factor C [Sulfolobus solfataricus 98/2]
Length = 330
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R +E Y + C+ +SK+ +PI+S + + P K++
Sbjct: 109 VLLDEADNMTADAQQALRRTMELYTENTRFILACNYLSKIIEPIQSRTALFRFYPLKKED 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V L +IA+ E + + E I D + ++R++I +A+
Sbjct: 169 VVNRLIYIAKNEKAEYDQKALETIYDITMGDMRKSINILQAA 210
>gi|444320537|ref|XP_004180925.1| hypothetical protein TBLA_0E03520 [Tetrapisispora blattae CBS 6284]
gi|387513968|emb|CCH61406.1| hypothetical protein TBLA_0E03520 [Tetrapisispora blattae CBS 6284]
Length = 324
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ S +E
Sbjct: 114 IILDEADSMTSGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYNKLSDEE 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+++ L I E E +Q + E I ++ ++RQAI + +++ V G ++ G
Sbjct: 174 VLKRLLQIIELENVQYTNDGLEAIIFTAEGDMRQAINNLQST-------VAGHTLVNG 224
>gi|333987924|ref|YP_004520531.1| replication factor C small subunit [Methanobacterium sp. SWAN-1]
gi|333826068|gb|AEG18730.1| Replication factor C small subunit [Methanobacterium sp. SWAN-1]
Length = 322
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + P +
Sbjct: 104 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFAPVKGRH 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
++ LE IA E +++ E I ++ ++R+A+ +AS M+ E V
Sbjct: 164 VMGRLEAIAAAENLKISPGAIESIVYFAEGDMRKAVNILQASSSMDEEVTEDSV 217
>gi|71000134|ref|XP_754784.1| DNA replication factor C subunit Rfc2 [Aspergillus fumigatus Af293]
gi|66852421|gb|EAL92746.1| DNA replication factor C subunit Rfc2, putative [Aspergillus
fumigatus Af293]
gi|159127792|gb|EDP52907.1| DNA replication factor C subunit Rfc2, putative [Aspergillus
fumigatus A1163]
Length = 394
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ + P
Sbjct: 154 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E L IA E ++L + +K+ S+ +LR+AI +++ ++
Sbjct: 214 AAERLAHIARLENLKLDEGVIDKLISCSEGDLRRAITYMQSAARL 258
>gi|11498795|ref|NP_070024.1| replication factor C large subunit [Archaeoglobus fulgidus DSM
4304]
gi|42559326|sp|O29072.1|RFCL_ARCFU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=afRFC large subunit; Short=afRFCla
gi|2649392|gb|AAB90051.1| activator 1, replication factor C, 53 KD subunit [Archaeoglobus
fulgidus DSM 4304]
Length = 479
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 30 VFFCCSDVSKLQP-IKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNSK 88
+ +D KL P +++LC +I +KQ++ VLE IA +EGI++ + KIA+N+
Sbjct: 140 LILIANDPYKLSPELRNLCEMINFKRLTKQQVARVLERIALKEGIKVDKSVLLKIAENAG 199
Query: 89 NNLRQAIRSFEASRQMNYPFVEGQVILTGW--EDDITNIATKIIEEQSP 135
+LR AI F+A + V LT E DI + I + ++P
Sbjct: 200 GDLRAAINDFQALAEGKEELKPEDVFLTKRTQEKDIFRVMQMIFKTKNP 248
>gi|45357990|ref|NP_987547.1| replication factor C small subunit [Methanococcus maripaludis S2]
gi|50400879|sp|Q6M044.1|RFCS_METMP RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|44920747|emb|CAF29983.1| Replication factor C, small subunit [Methanococcus maripaludis S2]
Length = 315
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+VE L+ I+E+E + L + I S+ ++R+AI + +
Sbjct: 164 LVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTA 205
>gi|297620154|ref|YP_003708259.1| Replication factor C [Methanococcus voltae A3]
gi|297379131|gb|ADI37286.1| Replication factor C [Methanococcus voltae A3]
Length = 314
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ + +I+E E I + ++ I S+ ++R+++ + +
Sbjct: 164 VLDYMNYISENENITIEKSGSDAIIYVSEGDMRKSVNVLQTA 205
>gi|257076223|ref|ZP_05570584.1| replication factor C small subunit [Ferroplasma acidarmanus fer1]
Length = 318
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E + + F C+ SK+ PI+S C V++ P ++
Sbjct: 104 IFLDEADHLTGDAQAALRRTMEMFYNTTRFIFSCNYSSKIIPPIQSRCVVLRFKPIDRES 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ L+ IA++E ++ + I + S ++R+A+ +A
Sbjct: 164 MKNRLKDIAKKENFEIDDDSLDAIYEISDGDMRKAVNVLQA 204
>gi|340623615|ref|YP_004742068.1| replication factor C small subunit [Methanococcus maripaludis X1]
gi|339903883|gb|AEK19325.1| replication factor C small subunit [Methanococcus maripaludis X1]
Length = 315
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+VE L+ I+E+E + L + I S+ ++R+AI + +
Sbjct: 164 LVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTA 205
>gi|291333464|gb|ADD93165.1| putative ATPase family associated with various cellular activities
AAA [uncultured archaeon MedDCM-OCT-S05-C724]
Length = 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ A +R +E+Y + C+ SK+ PI+S C V + P ++
Sbjct: 104 IFLDEADALTGAAQAALRRTMEKYSRTCRFVMSCNYSSKIIDPIQSRCAVFRFRPIKAED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
+ + L+F+A +E +++ + E + ++ +LR+AI +
Sbjct: 164 LEKYLKFVASKENVKVTKEAFESLTYLAQGDLRRAINGLQ 203
>gi|194763220|ref|XP_001963731.1| GF21175 [Drosophila ananassae]
gi|190618656|gb|EDV34180.1| GF21175 [Drosophila ananassae]
Length = 352
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ PI S C+ + +++
Sbjct: 137 VILDEADSMTHAAQSALRRTMEKESQSTRFCLICNYVSRIIVPITSRCSKFRFKSLGEEK 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYP 107
++ L+FI EQEG+Q+ + I S +LR+AI + ++ ++ P
Sbjct: 197 VIARLQFICEQEGVQIDPDAYKSIVKISGGDLRRAITTLQSCFRLKGP 244
>gi|159476624|ref|XP_001696411.1| DNA replication factor C complex subunit 4 [Chlamydomonas
reinhardtii]
gi|158282636|gb|EDP08388.1| DNA replication factor C complex subunit 4 [Chlamydomonas
reinhardtii]
gi|294845967|gb|ADF43126.1| RFC4p [Chlamydomonas reinhardtii]
Length = 332
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E Y + + F C+ VS++ +P+ S C + P
Sbjct: 112 LILDEADSMTQDAQNALRRTMETYSRVTRFVFICNYVSRIIEPLASRCAKFRFKPLQPAI 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+ +E I E+E + L + ++ S +LR+AI + +++ ++ V+ +L
Sbjct: 172 MAGRIEHICERESVTLGPGALDTLSAVSGGDLRRAINTLQSAARLGGGHVDRATLL 227
>gi|213514520|ref|NP_001135046.1| replication factor C subunit 5 [Salmo salar]
gi|209738250|gb|ACI69994.1| Replication factor C subunit 5 [Salmo salar]
Length = 335
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E+Y + C+ +SK+ P ++S CT + P S+ +
Sbjct: 116 VILDEADAMTRDAQNALRRVIEKYTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQDQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
++ LEF+ +QE I + + I S ++R+++ +++ E V TG
Sbjct: 176 MIPRLEFVIQQESIDVTPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDNVYTCTGH 235
Query: 118 -WEDDITNI 125
DI NI
Sbjct: 236 PLRSDIANI 244
>gi|320169797|gb|EFW46696.1| replication factor C subunit 4 [Capsaspora owczarzaki ATCC 30864]
Length = 347
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + C+ VS++ +P+ S C + P
Sbjct: 129 IILDEADSMTADAQSALRRMMETYSKTTRFCLICNYVSRIIEPLASRCAKFRFKPLDAGI 188
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L I ++EG+Q+ ++ S ++R+AI
Sbjct: 189 LTEKLTAIGDKEGLQIDASAINQLTAASGGDMRRAI 224
>gi|154339736|ref|XP_001565825.1| putative replication factor C, subunit 4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063143|emb|CAM45343.1| putative replication factor C, subunit 4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 360
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ A +R +E + + F C++ SK+ +PI+S C V++ S +
Sbjct: 141 VLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKIIEPIQSRCAVVRFKKLSDAD 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
I++ L ++ +QE + E + ++ +LRQA+ S +A+ Y V
Sbjct: 201 ILKRLVYVIQQESVSYTDDGLEALLYLAEGDLRQALNSLQAT-HTGYGLVNA 251
>gi|448633051|ref|ZP_21674049.1| replication factor C small subunit [Haloarcula vallismortis ATCC
29715]
gi|445752408|gb|EMA03832.1| replication factor C small subunit [Haloarcula vallismortis ATCC
29715]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA QE I+L + + + ++R+AI +A+
Sbjct: 174 VAEEIRNIAAQEDIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|440638884|gb|ELR08803.1| replication factor C subunit 3/5 [Geomyces destructans 20631-21]
Length = 393
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 159 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKERD 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVI 114
I +++ + E+E + + + E + SK ++R+A+ +A + P ++GQ I
Sbjct: 219 IRVLVDKVIEEETVNITREATEALTKLSKGDMRRALNVLQACHASSTPLHIKGQPI 274
>gi|448622422|ref|ZP_21669116.1| replication factor C small subunit [Haloferax denitrificans ATCC
35960]
gi|445754504|gb|EMA05909.1| replication factor C small subunit [Haloferax denitrificans ATCC
35960]
Length = 327
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 VAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|448582711|ref|ZP_21646215.1| replication factor C small subunit [Haloferax gibbonsii ATCC 33959]
gi|445732359|gb|ELZ83942.1| replication factor C small subunit [Haloferax gibbonsii ATCC 33959]
Length = 327
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 VAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|448560589|ref|ZP_21634037.1| replication factor C small subunit [Haloferax prahovense DSM 18310]
gi|445722239|gb|ELZ73902.1| replication factor C small subunit [Haloferax prahovense DSM 18310]
Length = 327
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 VAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|448543893|ref|ZP_21625354.1| replication factor C small subunit [Haloferax sp. ATCC BAA-646]
gi|448551053|ref|ZP_21629195.1| replication factor C small subunit [Haloferax sp. ATCC BAA-645]
gi|448558572|ref|ZP_21633129.1| replication factor C small subunit [Haloferax sp. ATCC BAA-644]
gi|445706035|gb|ELZ57922.1| replication factor C small subunit [Haloferax sp. ATCC BAA-646]
gi|445710609|gb|ELZ62407.1| replication factor C small subunit [Haloferax sp. ATCC BAA-645]
gi|445712324|gb|ELZ64106.1| replication factor C small subunit [Haloferax sp. ATCC BAA-644]
Length = 327
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P
Sbjct: 115 IFLDEADSLTNDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDA 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA E I++ + + + ++R+AI S +A+
Sbjct: 175 VAEQVRDIAAAEDIEVTEDGLDALVYAAGGDMRRAINSLQAA 216
>gi|448330306|ref|ZP_21519589.1| replication factor C small subunit 2 [Natrinema versiforme JCM
10478]
gi|445611985|gb|ELY65726.1| replication factor C small subunit 2 [Natrinema versiforme JCM
10478]
Length = 334
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + PS E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSFPSPSSDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ E +A + NLRQAI
Sbjct: 183 IVAVLERIVEREGVDYDADGLEFVAGYANGNLRQAI 218
>gi|190347750|gb|EDK40085.2| hypothetical protein PGUG_04183 [Meyerozyma guilliermondii ATCC
6260]
Length = 347
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ ++++ P+ S C+ + P +
Sbjct: 132 IILDEADSMTYDAQAALRRTMETYSGVTRFCLICNYITRIIDPLASRCSKFRFKPLANDN 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
V+ L +I +QE + + + + S +LR+AI +++ ++
Sbjct: 192 AVQRLRYIVQQEELNVDEDVFSYLLTISNGDLRRAITYLQSAARL 236
>gi|222478820|ref|YP_002565057.1| replication factor C small subunit [Halorubrum lacusprofundi ATCC
49239]
gi|222451722|gb|ACM55987.1| Replication factor C [Halorubrum lacusprofundi ATCC 49239]
Length = 327
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ +A +R +E++ + C+ SK+ PI+S C V + P S
Sbjct: 116 VFLDEADSLTDEAQAALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDAA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IA EGI++ + + + + ++R+AI S +A+
Sbjct: 176 VAAQTREIAAAEGIEVTDEGVDALVYAADGDMRRAINSLQAA 217
>gi|156083977|ref|XP_001609472.1| replication factor C 38 kDa subunit [Babesia bovis T2Bo]
gi|154796723|gb|EDO05904.1| replication factor C 38 kDa subunit [Babesia bovis]
Length = 349
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 5 EADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQEIVEV 63
+AD LS A +R +E Y ++ + +S++ P++S C I++ + EI +
Sbjct: 136 DADALSLPAQAALRRTMETYIKNARMILHVNQLSRIMLPLRSRCLCIRVGSHTIDEITTI 195
Query: 64 LEFIAEQEGI---QLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI--LTGW 118
L I + E + Q ++ +IA +S NLR+AI + E YP G + L W
Sbjct: 196 LRSICKIENVASAQSSDEVLRRIATSSGRNLRRAILTLETMTMGGYP---GNTVDFLLPW 252
Query: 119 EDDITNIATKIIEEQSP 135
E ++ I ++ QSP
Sbjct: 253 ERNVQQIVKYLMSNQSP 269
>gi|158292645|ref|XP_314028.3| AGAP005144-PA [Anopheles gambiae str. PEST]
gi|157017089|gb|EAA09454.3| AGAP005144-PA [Anopheles gambiae str. PEST]
Length = 327
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y V FC C+ +SK+ P I+S CT + P S
Sbjct: 111 IILDEADAMTNDAQNALRRIIEKYT--ENVRFCIICNYLSKIIPAIQSRCTRFRFAPLSP 168
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV---I 114
+I+ LE + E EGI + + + + ++R+ + +++ E V +
Sbjct: 169 DQILPRLEHVVEAEGIDVTDDGKKALMTLAGGDMRKVLNVLQSTWMAYKKVTEVNVYNCV 228
Query: 115 LTGWEDDITNIATKIIEEQSPK 136
++DI NI ++ E+S K
Sbjct: 229 GHPLKEDINNIIFWLLNEESFK 250
>gi|444315932|ref|XP_004178623.1| hypothetical protein TBLA_0B02620 [Tetrapisispora blattae CBS 6284]
gi|387511663|emb|CCH59104.1| hypothetical protein TBLA_0B02620 [Tetrapisispora blattae CBS 6284]
Length = 366
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+I+ EAD LS DA +R +E+Y ++ + +S + PIKS C +I+ PS +E
Sbjct: 145 VIINEADCLSRDAQAALRRTMEKYSRNIRLIMISNSLSPIISPIKSRCLLIRCPSPSDEE 204
Query: 60 IVEVLEFIAEQEGIQL-PHQLAEKIADNSKNNLRQAIRSFEA---SRQMNYPFVEGQVIL 115
+ +L+ I + E + + + +KI S NN+R ++ E+ S + N +I
Sbjct: 205 HLALLKKIVDAENVNVESDDILKKIVKESNNNIRTSVLMLESMALSNEFNLKST-SPIIK 263
Query: 116 TGWEDDITNIATKIIEEQS 134
W + I ++ KI +++S
Sbjct: 264 PDWLNTIIKLSMKIKKDRS 282
>gi|403368050|gb|EJY83856.1| ATPase involved in DNA replication [Oxytricha trifallax]
Length = 328
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL E D ++ A +R ++ Y + C+D +K+ +PI+S C +++ + +E
Sbjct: 109 IILDEGDAMTESAQQALRMIMTEYSSTTRFAIACNDSAKIIEPIQSRCAIVRFTKLNDEE 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
IVE L+ + ++E I+ E + + ++R A+ + +A+
Sbjct: 169 IVERLQIVMDREQIEYTPDGIEALVFTADGDMRYALNNLQAT 210
>gi|448531306|ref|ZP_21620993.1| replication factor C small subunit [Halorubrum hochstenium ATCC
700873]
gi|445707263|gb|ELZ59121.1| replication factor C small subunit [Halorubrum hochstenium ATCC
700873]
Length = 327
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ ++ IA E I++ + + + + ++R+AI S +A+
Sbjct: 176 VGGMVREIAAAEDIEVTDEGIDALVYAADGDMRRAINSLQAA 217
>gi|284161621|ref|YP_003400244.1| replication factor C [Archaeoglobus profundus DSM 5631]
gi|284011618|gb|ADB57571.1| Replication factor C [Archaeoglobus profundus DSM 5631]
Length = 755
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + C+ +S++ +PI+S C V + P +
Sbjct: 540 IFLDEADALTPDAQAALRRTMEMYSKTCRFILSCNYISRIIEPIQSRCAVFKFKPVPPEA 599
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ + L+ IAE+EG+++ + + + + R+AI + + + +
Sbjct: 600 MKKRLKEIAEKEGVKITDDALDALVYIANGDFRKAINALQGAAALG 645
>gi|433637069|ref|YP_007282829.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
gi|433288873|gb|AGB14696.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
Length = 329
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + S +
Sbjct: 116 IFLDEADALTSDAQSALRRTMEQFSHNTRFILSCNYSSQIIDPIQSRCAVFRFTELSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI 114
I IAE EGI L + + + ++R+AI +A+ M E V
Sbjct: 176 IEAQTREIAETEGISLTDDGVDALVYAAAGDMRKAINGLQAAAVMGEEVDEAAVF 230
>gi|320100775|ref|YP_004176367.1| replication factor C small subunit [Desulfurococcus mucosus DSM
2162]
gi|319753127|gb|ADV64885.1| replication factor C small subunit [Desulfurococcus mucosus DSM
2162]
Length = 347
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK+ +PI+S + + P K++
Sbjct: 129 VLLDEADNMTADAQQALRRLMELYSATTRFILTANYPSKIIEPIQSRTAIFRFSPLRKED 188
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+VE L +I E ++ + E I + S+ ++R+AI
Sbjct: 189 VVERLRYICNAEKVKCDERALETIYELSEGDMRRAI 224
>gi|448434836|ref|ZP_21586534.1| replication factor C small subunit [Halorubrum tebenquichense DSM
14210]
gi|445684459|gb|ELZ36835.1| replication factor C small subunit [Halorubrum tebenquichense DSM
14210]
Length = 327
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ ++ IA E I++ + + + + ++R+AI S +A+
Sbjct: 176 VGGMVREIAAAEDIEVTDEGIDALVYAADGDMRRAINSLQAA 217
>gi|302851817|ref|XP_002957431.1| DNA replication factor C complex subunit 2 [Volvox carteri f.
nagariensis]
gi|300257235|gb|EFJ41486.1| DNA replication factor C complex subunit 2 [Volvox carteri f.
nagariensis]
Length = 335
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E Y + C+ SK+ +PI+S C +++ S +
Sbjct: 121 VILDEADSMTAGAQQALRRTMEIYSNTTRFALACNQSSKIIEPIQSRCAIVRYSRISDVD 180
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
I+ L + E+EG+ + E + + ++RQA+ + +A+ + F+ + + +
Sbjct: 181 ILSRLRLVCEKEGVTYNDEGMEALIFTADGDMRQALNNLQATHS-GFGFISQENVFKVCD 239
Query: 120 DDITNIATKIIEEQS 134
+ IIE S
Sbjct: 240 QPHPKLVMSIIENCS 254
>gi|255558636|ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
gi|223540562|gb|EEF42129.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 141 VLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIH 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG 117
+ + L+ + E EG+ +P + S ++R+A+ +++ + E V L TG
Sbjct: 201 VTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNILQSTHMASQQITEEAVHLCTG 259
>gi|330834115|ref|YP_004408843.1| replication factor C small subunit [Metallosphaera cuprina Ar-4]
gi|329566254|gb|AEB94359.1| replication factor C small subunit [Metallosphaera cuprina Ar-4]
Length = 325
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L EAD +++DA +R +E Y + C+ +SK + PI+S + + P K++
Sbjct: 105 VLLDEADNMTSDAQQALRRTMELYTESTRFILACNYLSKIIDPIQSRTALFRFYPLKKED 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ LE I ++E +Q + E + D + ++R+AI +A+
Sbjct: 165 VILRLENILKEEKVQYDVKSLEVVYDVTGGDMRKAINVLQAA 206
>gi|119719184|ref|YP_919679.1| replication factor C large subunit [Thermofilum pendens Hrk 5]
gi|150415669|sp|A1RWU6.1|RFCL_THEPD RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|119524304|gb|ABL77676.1| replication factor C large subunit [Thermofilum pendens Hrk 5]
Length = 413
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 39 KLQPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSF 98
KL+P++ LC +I+ K++I++VLE I +EG++ ++ IADN+K +LR AI
Sbjct: 152 KLRPLRDLCELIEFKKIGKRDIMKVLENICSKEGVECSREVLSAIADNAKGDLRAAINDL 211
Query: 99 EA 100
++
Sbjct: 212 QS 213
>gi|448312442|ref|ZP_21502187.1| replication factor C small subunit 2 [Natronolimnobius
innermongolicus JCM 12255]
gi|445601660|gb|ELY55646.1| replication factor C small subunit 2 [Natronolimnobius
innermongolicus JCM 12255]
Length = 334
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVSVRAPASEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E EG++ E +A + NLRQAI
Sbjct: 183 IVGVLERIVEAEGVEYDADGLEFVAGYAGGNLRQAI 218
>gi|328767253|gb|EGF77303.1| hypothetical protein BATDEDRAFT_91654 [Batrachochytrium
dendrobatidis JAM81]
Length = 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD L+TDA +R ++E Y + + C+ VS+ + P+ S C ++ P
Sbjct: 114 IVLDEADSLTTDAQSALRRIMENYSKITRFCLICNYVSRIIDPLASRCAKLRFKPIPMPI 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
++E LE I E + + +A + +LR+AI ++ ++++ G +
Sbjct: 174 VIERLELICSNEKLSFAPGALDFLATSCAGDLRKAITLLQSIKKVSI----GSTVTKSLV 229
Query: 120 DDITNI 125
DI+ I
Sbjct: 230 ADISGI 235
>gi|320163538|gb|EFW40437.1| replication factor C 5 [Capsaspora owczarzaki ATCC 30864]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E+Y + C+ VSK+ P I+S CT + P S ++
Sbjct: 131 VILDEADAMTSDAQAALRRVIEKYTRNTRFCLICNYVSKITPAIQSRCTRFRFAPLSSEQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L F+ E E + + + ++ ++R+ + +++
Sbjct: 191 MLDRLNFVIESERVNVTDDGKAALMRLAQGDMRKVLNILQST 232
>gi|19115452|ref|NP_594540.1| DNA replication factor C complex subunit Rfc2 [Schizosaccharomyces
pombe 972h-]
gi|1350581|sp|Q09843.1|RFC2_SCHPO RecName: Full=Replication factor C subunit 2; Short=Replication
factor C2; AltName: Full=Activator 1 41 kDa subunit
gi|1039340|emb|CAA91237.1| DNA replication factor C complex subunit Rfc2 [Schizosaccharomyces
pombe]
Length = 340
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ ++++ P+ S C+ + P +
Sbjct: 127 IILDEADSMTQDAQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFKPLDNEN 186
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+V+ LEFIA + + + + + + S ++R+AI +++ ++
Sbjct: 187 MVKRLEFIAADQAVSMEPGVVNALVECSGGDMRKAITFLQSAANLH 232
>gi|150403344|ref|YP_001330638.1| replication factor C small subunit [Methanococcus maripaludis C7]
gi|166225156|sp|A6VJ61.1|RFCS_METM7 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|150034374|gb|ABR66487.1| Replication factor C [Methanococcus maripaludis C7]
Length = 315
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFVLSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+VE L+ I+E+E + L + I S+ ++R+AI + +
Sbjct: 164 LVENLKEISEKENLTLEKGGIDAIIYVSEGDMRKAINVLQTA 205
>gi|218884000|ref|YP_002428382.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
gi|218765616|gb|ACL11015.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
Length = 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK ++PI+S + + P S+++
Sbjct: 108 VLLDEADNMTADAQQALRRLMELYSATTRFILTANYPSKIIEPIQSRTAIFRFSPLSRED 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+V L++I E I+ + E I + S+ ++R+AI
Sbjct: 168 VVGRLKYICNAEKIECAEKALETIYELSEGDMRRAI 203
>gi|390938548|ref|YP_006402286.1| replication factor C [Desulfurococcus fermentans DSM 16532]
gi|390191655|gb|AFL66711.1| Replication factor C [Desulfurococcus fermentans DSM 16532]
Length = 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R L+E Y + + SK ++PI+S + + P S+++
Sbjct: 108 VLLDEADNMTADAQQALRRLMELYSATTRFILTANYPSKIIEPIQSRTAIFRFSPLSRED 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+V L++I E I+ + E I + S+ ++R+AI
Sbjct: 168 VVGRLKYICNAEKIECAEKALETIYELSEGDMRRAI 203
>gi|328794001|ref|XP_003251959.1| PREDICTED: replication factor C subunit 4-like, partial [Apis
mellifera]
Length = 303
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P + +
Sbjct: 113 IVLDEADSMTGAAQAALRRTMEKESHSTRFCLICNYVSRIIEPLTSRCTKFRFKPLGENK 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I+E LE+I ++E +++ + KI + S +LR+AI ++
Sbjct: 173 IIERLEYICKEEDLKVEKPVLLKIVEVSGGDLRRAITCLQS 213
>gi|327401750|ref|YP_004342589.1| replication factor C small subunit [Archaeoglobus veneficus SNP6]
gi|327317258|gb|AEA47874.1| Replication factor C small subunit [Archaeoglobus veneficus SNP6]
Length = 322
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E Y + + C+ VS++ +PI+S C V + P +
Sbjct: 107 IFLDEADALTPDAQAALRRTMEMYSKICRFILSCNYVSRIIEPIQSRCAVFKFRPVPPEA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ + L I E EG+++ E + S + R+AI + + + +
Sbjct: 167 MRKRLLEICENEGVKITEDGLEALIYVSNGDFRKAINALQGAAALG 212
>gi|171692201|ref|XP_001911025.1| hypothetical protein [Podospora anserina S mat+]
gi|170946049|emb|CAP72850.1| unnamed protein product [Podospora anserina S mat+]
Length = 357
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + ++
Sbjct: 137 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDEQ 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I + EG++ + +++ ++RQAI + + S + FV G +
Sbjct: 197 VVKRLLQIIDAEGVKFSEDGLAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 251
>gi|330845966|ref|XP_003294831.1| replication factor C subunit [Dictyostelium purpureum]
gi|325074630|gb|EGC28646.1| replication factor C subunit [Dictyostelium purpureum]
Length = 344
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++DA +R +E + C+ +S++ P+ S C + P +
Sbjct: 121 IILDEADSMTSDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDSEA 180
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+E L++I+ QEGI+ + + I S ++R+AI +++ + F ++ E
Sbjct: 181 TIERLKYISIQEGIKCTDSVYQAIQTVSDGDMRKAITYLQSA----FRFYGNKLT----E 232
Query: 120 DDITNIA 126
D I NI+
Sbjct: 233 DTIYNIS 239
>gi|159904872|ref|YP_001548534.1| replication factor C small subunit [Methanococcus maripaludis C6]
gi|226739142|sp|A9A6K6.1|RFCS_METM6 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|159886365|gb|ABX01302.1| Replication factor C [Methanococcus maripaludis C6]
Length = 315
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+VE L+ I+E+E + L + I S+ ++R+AI + +
Sbjct: 164 LVENLKDISEKETLTLEKGGIDAIIYVSEGDMRKAINVLQTA 205
>gi|254564511|ref|XP_002489366.1| replication factor C subunit [Komagataella pastoris GS115]
gi|238029162|emb|CAY67082.1| Subunit of heteropentameric Replication factor C (RF-C)
[Komagataella pastoris GS115]
gi|328349795|emb|CCA36195.1| replication factor C subunit 2/4 [Komagataella pastoris CBS 7435]
Length = 324
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E Y G + F C+ +K+ +P++S C++++ ++
Sbjct: 111 VILDEADSMTPGAQQALRRTMEIYSGTTRFVFACNMSNKIIEPLQSRCSILRYSKLYDEQ 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L +I ++EG++ E + ++ ++RQAI + +++
Sbjct: 171 VLSRLLYICKEEGVKYTDDGLEALIFTAEGDMRQAINNLQST 212
>gi|118386221|ref|XP_001026231.1| ATPase, AAA family protein [Tetrahymena thermophila]
gi|89307998|gb|EAS05986.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 321
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L+ A +R ++ + + C+D SKL I+S C +++ + ++
Sbjct: 107 IILDEADSLTEGAQQALRMIISDFADTTRFVLSCNDSSKLIDAIQSRCAILRFTKLTDEQ 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ LE I E+E I++ E + + ++RQAI + +A+
Sbjct: 167 ILRRLEEIVEKENIKIDKGGKEALLFTCEGDMRQAINNLQAT 208
>gi|307353132|ref|YP_003894183.1| Replication factor C [Methanoplanus petrolearius DSM 11571]
gi|307156365|gb|ADN35745.1| Replication factor C [Methanoplanus petrolearius DSM 11571]
Length = 324
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E Y + C+ SK+ PI+S C + + P ++
Sbjct: 107 LFLDEADALTNDAQAALRRTMENYAYTCRFILSCNYSSKIIDPIQSRCALYRFRPLDREA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E L IA+ EG+ + I ++ ++R+AI + +
Sbjct: 167 VTEELNRIAKTEGLSITEDAMSAIIYVAQGDMRKAINALQGG 208
>gi|84998148|ref|XP_953795.1| replication factor C subunit (RPC2 ) [Theileria annulata]
gi|65304792|emb|CAI73117.1| replication factor C subunit (RPC2 homologue) , putative [Theileria
annulata]
Length = 336
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y +++ C+ + K + PI S C+V P
Sbjct: 119 IILDEADMITADAQAALRRVIENYSSISRFILICNYLHKIIGPIYSRCSVFHFKPIETNS 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
++ L++I QEGI + I S ++R++I
Sbjct: 179 QIDRLKYICNQEGITFDPKFLTTI---SSGDMRKSI 211
>gi|402074193|gb|EJT69722.1| replication factor C subunit 4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 360
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 136 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYARLTDAQ 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V L I E EG++ + +++ ++RQAI + + S + FV G +
Sbjct: 196 VVRRLLQIIEAEGVRHSEDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 250
>gi|448376175|ref|ZP_21559459.1| replication factor C small subunit [Halovivax asiaticus JCM 14624]
gi|445658193|gb|ELZ11016.1| replication factor C small subunit [Halovivax asiaticus JCM 14624]
Length = 329
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + S +
Sbjct: 116 IFLDEADALTSDAQSALRRTMEQFSHNTRFILSCNYSSQIIDPIQSRCAVFRFTELSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I IAE EGI L + + + ++R+AI +A+ M
Sbjct: 176 IEAQTREIAETEGISLTDDGVDALVYAAAGDMRKAINGLQAAAVMG 221
>gi|229366198|gb|ACQ58079.1| Replication factor C subunit 5 [Anoplopoma fimbria]
Length = 335
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E+Y ++ C+ +SK+ P ++S CT + P S +
Sbjct: 116 VILDEADHMTQDAQNALRRVIEKYTENTRLCLICNYLSKIIPALQSRCTRFRFGPLSPDQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
++ LE++ +QE I + + I S ++R+++ + S M Y V + T
Sbjct: 176 MIPRLEYVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQ-STSMAYGKVTEDTVYTCTG 234
Query: 117 -GWEDDITNI 125
DI NI
Sbjct: 235 HPLRSDIANI 244
>gi|374109199|gb|AEY98105.1| FAFR422Wp [Ashbya gossypii FDAG1]
Length = 349
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + P
Sbjct: 134 IILDEADSMTADAQSALRRTMETYSSVTRFCLICNYVTRIIDPLASRCSKFRFKPLDNVN 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ LE IA+QE + EK+ ++ +LR+AI + + +M ++ + I T
Sbjct: 194 ALGRLEQIAQQEALSYEAGALEKVLHIAEGDLRKAITLLQTAAKMT-SYMAAEKITTAQV 252
Query: 120 DDITNI 125
+++ +
Sbjct: 253 EELAGV 258
>gi|398390788|ref|XP_003848854.1| replication factor C subunit 4 [Zymoseptoria tritici IPO323]
gi|339468730|gb|EGP83830.1| hypothetical protein MYCGRDRAFT_76271 [Zymoseptoria tritici IPO323]
Length = 351
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y G + F C+ +K ++P++S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSGTTRFAFACNQSNKIIEPLQSRCAILRYARLTDGQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I + E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 190 VVKRLYQICQAEKVEYSDDGIAALVFSAEGDMRQAINNLQ-STHAGFGFVNGDNVF 244
>gi|134046237|ref|YP_001097722.1| replication factor C small subunit [Methanococcus maripaludis C5]
gi|166225155|sp|A4FZ74.1|RFCS_METM5 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|132663862|gb|ABO35508.1| replication factor C small subunit [Methanococcus maripaludis C5]
Length = 315
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+VE L+ I+E+E + L + I S+ ++R+AI + +
Sbjct: 164 LVENLKDISEKETLTLEKGGIDAIIYVSEGDMRKAINVLQTA 205
>gi|448102295|ref|XP_004199768.1| Piso0_002311 [Millerozyma farinosa CBS 7064]
gi|359381190|emb|CCE81649.1| Piso0_002311 [Millerozyma farinosa CBS 7064]
Length = 360
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ S C+ + +
Sbjct: 130 IILDEADSMTNDAQSALRRTIENYSGVTRFCLICNYITRIIDPLSSRCSKFRFGLLNNDN 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNY 106
++ + +I E+E + + + E + S +LR+AI +++ ++++
Sbjct: 190 ALQRIRYIVEKENLNVDEDVPETLLSMSNGDLRKAITFLQSASRLSF 236
>gi|269859750|ref|XP_002649599.1| replication factor C subunit [Enterocytozoon bieneusi H348]
gi|220066962|gb|EED44431.1| replication factor C subunit [Enterocytozoon bieneusi H348]
Length = 349
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I++ +A+ L+ DA +R +E+Y K+F C++++ + +PIKS +I+ ++ E
Sbjct: 131 ILIDQAENLTKDAQAALRITMEQYSSYFKIFMICTNINTIIEPIKSRSLLIRCRQFAENE 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFE 99
++ +LE I+ +EG + + + IA NS + +AI E
Sbjct: 191 LITILETISLKEGYNISLDILKDIAINSNGDCGRAISLLE 230
>gi|193702269|ref|XP_001948634.1| PREDICTED: replication factor C subunit 4-like [Acyrthosiphon
pisum]
Length = 359
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVS-KLQPIKSLCTVIQLLPPSKQE 59
++L EAD ++ A +R +ER + C+ VS + P+ S C+ + P S +
Sbjct: 144 VVLDEADSMTAPAQAALRRTIERETKTTRFCLICNYVSCIIDPLTSRCSKFRFKPLSHEI 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
++ LE I ++EG++ ++ ++ D S ++R+AI S +++ ++
Sbjct: 204 MLTRLEHICKEEGVKCAPRVLARLVDASGGDMRRAITSLQSTARL 248
>gi|363539784|ref|YP_004894673.1| mg622 gene product [Megavirus chiliensis]
gi|350610949|gb|AEQ32393.1| putative replication factor C small subunit [Megavirus chiliensis]
Length = 364
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ +A +R ++E+Y + F C+ +SK+ IKS CT I
Sbjct: 118 IILDEADSMTDEAQDALRVIIEQYSTTTRFCFICNYISKITDAIKSRCTAIYFKKLDDGC 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+++ L+ I+ +E ++L +++ I D S ++R+AI
Sbjct: 178 MIDKLKEISTKESMKLSNEILSTIIDVSNGDMRKAI 213
>gi|385302248|gb|EIF46388.1| activator 1 40 kda subunit [Dekkera bruxellensis AWRI1499]
Length = 382
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKG-LNKVFFCCSDVSKLQPIKSLCTVIQLLPPSKQE 59
+I+ EA++LS DA +R +E++ + V C S + + PIKS I++ PS E
Sbjct: 145 VIINEAEQLSRDAQAALRRTMEKFSANIRLVLICTSTSNIIDPIKSRTLAIRVGLPSIDE 204
Query: 60 IVEVLEFIAEQEGI---QLPHQLAEK------IADNSKNNLRQAIRSFEASRQMNYPFV- 109
+VLE I E + + P +E+ IAD NLR I EA N
Sbjct: 205 CGQVLETILSHESMARKEFPSDQSERYEIYRHIADACNQNLRMGIMMLEALYMNNDKVTP 264
Query: 110 EGQVILTGWEDDITNIATKIIEEQS 134
VI W+ I +A I++++S
Sbjct: 265 TTXVIRPDWQLVIEELARGILKDRS 289
>gi|359492415|ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
Length = 334
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 112 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEI 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I ++E + L + ++ S+ +LR+AI + + ++
Sbjct: 172 MSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARL 216
>gi|225459625|ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
vinifera]
gi|302141781|emb|CBI18984.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I ++E + L + ++ S+ +LR+AI + + ++
Sbjct: 179 MSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARL 223
>gi|147858312|emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 119 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEI 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I ++E + L + ++ S+ +LR+AI + + ++
Sbjct: 179 MSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARL 223
>gi|452986023|gb|EME85779.1| hypothetical protein MYCFIDRAFT_41166 [Pseudocercospora fijiensis
CIRAD86]
Length = 353
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y G + F C+ +K+ +P++S C +++ + +
Sbjct: 131 VILDEADSMTSGAQQALRRTMEIYSGTTRFAFACNLSNKIIEPLQSRCAILRYSRLTDAQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 191 VVKRLYQICEAEKVEYSDDGIAALVFSAEGDMRQAINNLQ-STHAGFGFVNGDNVF 245
>gi|400594648|gb|EJP62486.1| replication factor C subunit 3 [Beauveria bassiana ARSEF 2860]
Length = 376
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P + +
Sbjct: 141 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYAHKLSPALLSRCTRFRFSPLKEAD 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + ++EG+++ + + + SK ++R+A+ +A + P
Sbjct: 201 IRQLVTRVVDEEGVRIGAEAVDALVKLSKGDMRRALNVLQACHASSTPL 249
>gi|378727708|gb|EHY54167.1| replication factor C subunit 3/5 [Exophiala dermatitidis
NIH/UT8656]
Length = 408
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P K++
Sbjct: 162 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKKED 221
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQ 112
I +++ + +E + + E + + SK ++R+A+ +A + P + GQ
Sbjct: 222 IRRLVDHVIAEEKVNIAPDAVESLVELSKGDMRRALNVLQACHAGSRPLPIRGQ 275
>gi|392573304|gb|EIW66444.1| hypothetical protein TREMEDRAFT_74703 [Tremella mesenterica DSM
1558]
Length = 490
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P ++
Sbjct: 260 IILDEADSMTHDAQSALRRIMETYSRITRFCLVCNYVTRIIEPLASRCSKFRFKPLAQGS 319
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+E I + EG+ + + ++I + + +LR+AI + +++++
Sbjct: 320 SQARMEMIVKAEGVDIEDGVLDRILELAGGDLRKAITFLQTAQRLH 365
>gi|126458633|ref|YP_001054911.1| replication factor C small subunit [Pyrobaculum calidifontis JCM
11548]
gi|158513488|sp|A3MS28.1|RFCS_PYRCJ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|126248354|gb|ABO07445.1| Replication factor C [Pyrobaculum calidifontis JCM 11548]
Length = 326
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R ++E Y + + VS++ PI S C V + P +
Sbjct: 105 VILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRHL 164
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L IA EG++L + I + S+ ++R+AI
Sbjct: 165 MAERLREIARSEGVELKDDAIDLIYEISEGDMRKAI 200
>gi|288560386|ref|YP_003423872.1| replication factor C small subunit RfcS [Methanobrevibacter
ruminantium M1]
gi|288543096|gb|ADC46980.1| replication factor C small subunit RfcS [Methanobrevibacter
ruminantium M1]
Length = 314
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y C+ SK+ PI+S C + + P +E
Sbjct: 103 IFLDEVDNMTKDAQHALRREMEMYTKTCSFILSCNYSSKIIDPIQSRCAIFRFAPIKAEE 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + L++IAE EG + + E I + ++R+++ +++
Sbjct: 163 IADRLKYIAEAEGCEYEEKAIETIVLFGEGDMRKSVNMLQSA 204
>gi|448364052|ref|ZP_21552646.1| replication factor C small subunit [Natrialba asiatica DSM 12278]
gi|445644940|gb|ELY97947.1| replication factor C small subunit [Natrialba asiatica DSM 12278]
Length = 331
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 119 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IAE EGI++ + + + ++R+AI + +A+ M
Sbjct: 179 IEAQVREIAETEGIEVTDDGVDALVYAADGDMRKAINALQAAAVMG 224
>gi|311977866|ref|YP_003986986.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|82000158|sp|Q5UQE8.1|RFCS2_MIMIV RecName: Full=Putative replication factor C small subunit L478;
Short=RFC small subunit L478; AltName: Full=Clamp loader
small subunit L478
gi|55417094|gb|AAV50744.1| putative replication factor C [Acanthamoeba polyphaga mimivirus]
gi|308204420|gb|ADO18221.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|351737631|gb|AEQ60666.1| putative replication factor C small subunit [Acanthamoeba
castellanii mamavirus]
gi|398257305|gb|EJN40913.1| putative replication factor C [Acanthamoeba polyphaga
lentillevirus]
Length = 370
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I++ + L+ ++ +R +ERY + C+++SK + P++S C + P+ +
Sbjct: 130 IVIHNIENLANNSQAALRRTMERYAKTCRFIMVCNNLSKIMDPLRSRCRTFCVPLPTIEN 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
I V+++IA E I+L + I DN NNL+ AI
Sbjct: 190 INTVVDYIAFMENIKLNKNDTKFILDNCNNNLKTAI 225
>gi|57012999|sp|Q5UZE5.2|RFCS_HALMA RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
Length = 325
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E I+L + + + ++R+AI +A+
Sbjct: 174 VAEEIRTIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|167042652|gb|ABZ07373.1| putative ATPase family associated with various cellular activities
(AAA) [uncultured marine crenarchaeote HF4000_ANIW133M9]
gi|167043915|gb|ABZ08603.1| putative ATPase family associated with various cellular activities
(AAA) [uncultured marine crenarchaeote HF4000_APKG3H9]
gi|167044610|gb|ABZ09283.1| putative ATPase family associated with various cellular activities
(AAA) [uncultured marine crenarchaeote HF4000_APKG7F11]
Length = 318
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD+++ DA +R + E + + +++SK+ +PI+S C V + S +E
Sbjct: 109 IILDEADEMTADAQTALRRITEDTAKICRFILIANNLSKIIKPIQSRCVVFKFTKISDKE 168
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA---SRQMNYPFVEGQVILT 116
I+ L+ I ++E I+ + I D + +LR AI +A S + V+ V LT
Sbjct: 169 ILSQLKSIGKKEKIKADEKGLSAICDYTDGDLRHAINILQAAASSGNVTESVVKSVVGLT 228
Query: 117 GWED 120
D
Sbjct: 229 KTND 232
>gi|121719320|ref|XP_001276359.1| DNA replication factor C subunit Rfc3, putative [Aspergillus
clavatus NRRL 1]
gi|119404557|gb|EAW14933.1| DNA replication factor C subunit Rfc3, putative [Aspergillus
clavatus NRRL 1]
Length = 395
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 158 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 217
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 218 IRSLVDHVIEKEQVQIQPEAVSSLVKLSKGDMRRALNVLQACHASSKPL 266
>gi|433589463|ref|YP_007278959.1| DNA polymerase III, gamma/tau subunit [Natrinema pellirubrum DSM
15624]
gi|448335603|ref|ZP_21524744.1| replication factor C small subunit 2 [Natrinema pellirubrum DSM
15624]
gi|433304243|gb|AGB30055.1| DNA polymerase III, gamma/tau subunit [Natrinema pellirubrum DSM
15624]
gi|445616581|gb|ELY70202.1| replication factor C small subunit 2 [Natrinema pellirubrum DSM
15624]
Length = 334
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + P+ +E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIGTRQPTKLIPPIRSRCFPVSFPSPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREGVDYDADGLEFVAGYADGNLRQAI 218
>gi|448638308|ref|ZP_21676281.1| replication factor C small subunit [Haloarcula sinaiiensis ATCC
33800]
gi|448655209|ref|ZP_21682061.1| replication factor C small subunit [Haloarcula californiae ATCC
33799]
gi|445763557|gb|EMA14744.1| replication factor C small subunit [Haloarcula sinaiiensis ATCC
33800]
gi|445765658|gb|EMA16796.1| replication factor C small subunit [Haloarcula californiae ATCC
33799]
Length = 325
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E I+L + + + ++R+AI +A+
Sbjct: 174 VAEEIRTIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|225459627|ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
vinifera]
Length = 329
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + FF C+ +S+ ++P+ S C + P S++
Sbjct: 107 IILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEI 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I ++E + L + ++ S+ +LR+AI + + ++
Sbjct: 167 MSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARL 211
>gi|10640840|emb|CAC12618.1| probable replication factor C, 40 KD subunit [Thermoplasma
acidophilum]
Length = 330
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD+L+ +A +R +E Y + F C+ SK+ PI+S V++ P +
Sbjct: 116 LFLDEADQLTAEAQAALRRTMEIYSETTRFIFSCNYSSKIIPPIQSRTVVMRFRPVPDEY 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I L+ IA+ EG Q+ + + + S ++R+AI +A
Sbjct: 176 ISRKLQEIAKNEGFQIDEESMHALVEVSAGDMRKAINVLQA 216
>gi|16082630|ref|NP_394950.1| replication factor C small subunit [Thermoplasma acidophilum DSM
1728]
gi|73920752|sp|Q9HI47.2|RFCS_THEAC RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
Length = 318
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD+L+ +A +R +E Y + F C+ SK+ PI+S V++ P +
Sbjct: 104 LFLDEADQLTAEAQAALRRTMEIYSETTRFIFSCNYSSKIIPPIQSRTVVMRFRPVPDEY 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I L+ IA+ EG Q+ + + + S ++R+AI +A
Sbjct: 164 ISRKLQEIAKNEGFQIDEESMHALVEVSAGDMRKAINVLQA 204
>gi|448388975|ref|ZP_21565470.1| replication factor C small subunit [Haloterrigena salina JCM 13891]
gi|445669262|gb|ELZ21874.1| replication factor C small subunit [Haloterrigena salina JCM 13891]
Length = 330
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IAE EGI++ + + + ++R+AI +A+ M
Sbjct: 177 IEAQVREIAENEGIEVTDDGVDALVYAADGDMRKAINGLQAAAVMG 222
>gi|55379214|ref|YP_137064.1| replication factor C small subunit [Haloarcula marismortui ATCC
43049]
gi|55231939|gb|AAV47358.1| replication factor C small subunit [Haloarcula marismortui ATCC
43049]
Length = 345
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 134 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E I+L + + + ++R+AI +A+
Sbjct: 194 VAEEIRTIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 235
>gi|225426826|ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 114 VILDEADSMTTGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQE 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E E + + E I + ++RQA+ + +A+
Sbjct: 174 ILGRLMVVVEAEKVPFVPEGLEAIIFTADGDMRQALNNLQAT 215
>gi|409082644|gb|EKM83002.1| hypothetical protein AGABI1DRAFT_69120 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 372
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 138 IILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSES 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
L +IA++E I + + + + S +LR+AI
Sbjct: 198 ATSRLTYIAKEEQIDVDTSVIDALITVSNGDLRRAI 233
>gi|384497070|gb|EIE87561.1| hypothetical protein RO3G_12272 [Rhizopus delemar RA 99-880]
Length = 259
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + C+ VS++ +PI S C + ++
Sbjct: 46 IILDEADSMTKDAQSALRRTMETYSTTTRFCIICNYVSRIIEPITSRCAKFRFTSLPVED 105
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ + LE I QEG+QL + + S +LR+AI
Sbjct: 106 LEQRLEMICLQEGVQLAPNTMQTLIQCSGGDLRKAI 141
>gi|401425841|ref|XP_003877405.1| putative replication factor C, subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493650|emb|CBZ28940.1| putative replication factor C, subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 354
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E + + + C+ VS++ PI S C + P K
Sbjct: 142 IILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVKSA 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
+ +E++A+ EGI L + S +LR AI +++++
Sbjct: 202 LYHRIEYVAQAEGITLSPASLHALDTVSGGDLRLAIMHLQSAQK 245
>gi|168030360|ref|XP_001767691.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681011|gb|EDQ67442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E Y + + F C+ VS++ +P+ S C + P +
Sbjct: 117 LILDEADSMTEDAQNALRRTMENYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLLENV 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ +++I ++EG++L + ++ S+ +LR+AI + +
Sbjct: 177 MQNRIQYICQEEGLKLDQEALSTLSRVSEGDLRRAITCLQCA 218
>gi|448098395|ref|XP_004198917.1| Piso0_002311 [Millerozyma farinosa CBS 7064]
gi|359380339|emb|CCE82580.1| Piso0_002311 [Millerozyma farinosa CBS 7064]
Length = 360
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ S C+ + + +
Sbjct: 130 IILDEADSMTNDAQSALRRTIENYSGVTRFCLICNYITRIIDPLSSRCSKFRFGLLNNEN 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
+ +++I E+E + + + E + S +LR+AI +++ ++++
Sbjct: 190 ALSRIKYIVEKENLNVDEDVPETLLSISNGDLRKAITFLQSASRLSFALA 239
>gi|339061416|gb|AEJ34720.1| putative replication factor C [Acanthamoeba polyphaga mimivirus]
Length = 227
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I++ + L+ ++ +R +ERY + C+++SK + P++S C + P+ +
Sbjct: 130 IVIHNIENLANNSQAALRRTMERYAKTCRFIMVCNNLSKIMDPLRSRCRTFCVPLPTIEN 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
I V+++IA E I+L + I DN NNL+ AI
Sbjct: 190 INTVVDYIAFMENIKLNKNDTKFILDNCNNNLKTAI 225
>gi|242066704|ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
gi|241934472|gb|EES07617.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
Length = 362
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 143 VLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSH 202
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L+ I + EG+ + + S ++R+A+ +++ + E V L TG
Sbjct: 203 VRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGN 262
Query: 118 -WEDDITNIATKIIEE 132
+DI IA ++ E
Sbjct: 263 PMPNDIERIAFWLLNE 278
>gi|398019618|ref|XP_003862973.1| replication factor C, subunit 2, putative [Leishmania donovani]
gi|322501204|emb|CBZ36283.1| replication factor C, subunit 2, putative [Leishmania donovani]
Length = 354
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E + + + C+ VS++ PI S C + P K
Sbjct: 142 IILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVKSA 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
+ +E++A+ EGI L + S +LR AI +++++
Sbjct: 202 LYHRIEYVAQAEGITLSPASLHALDTVSGGDLRLAIMHLQSAQK 245
>gi|328870657|gb|EGG19030.1| replication factor C subunit [Dictyostelium fasciculatum]
Length = 358
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E + C+ ++++ +P+ S C + P +
Sbjct: 137 IILDEADSMTQDAQAALRRTIENTSKTTRFCLLCNYITRIIEPLSSRCAKFRFKPLKSEA 196
Query: 60 IVEVLEFIAEQEGIQLPHQLA-EKIADNSKNNLRQAIRSFEASRQM 104
+ E L++IA+QEG+ L ++ + I S+ ++R+AI +++ +
Sbjct: 197 MGERLKYIADQEGVNLANESTLDAIHTVSQGDMRKAITFMQSAHRF 242
>gi|146093994|ref|XP_001467108.1| putative replication factor C, subunit 2 [Leishmania infantum
JPCM5]
gi|134071472|emb|CAM70161.1| putative replication factor C, subunit 2 [Leishmania infantum
JPCM5]
Length = 354
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E + + + C+ VS++ PI S C + P K
Sbjct: 142 IILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVKSA 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
+ +E++A+ EGI L + S +LR AI +++++
Sbjct: 202 LYHRIEYVAQAEGITLSPASLHALDTVSGGDLRLAIMHLQSAQK 245
>gi|157872662|ref|XP_001684866.1| putative replication factor C, subunit 2 [Leishmania major strain
Friedlin]
gi|68127936|emb|CAJ06571.1| putative replication factor C, subunit 2 [Leishmania major strain
Friedlin]
Length = 354
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E + + + C+ VS++ PI S C + P K
Sbjct: 142 IILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVKSA 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
+ +E++A+ EGI L + S +LR AI +++++
Sbjct: 202 LYHRIEYVAQAEGITLSPASLHALDTVSGGDLRLAIMHLQSAQK 245
>gi|50424927|ref|XP_461055.1| DEHA2F16016p [Debaryomyces hansenii CBS767]
gi|49656724|emb|CAG89431.1| DEHA2F16016p [Debaryomyces hansenii CBS767]
Length = 368
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ S C+ + +
Sbjct: 135 IILDEADSMTNDAQSALRRTMENYSGVTRFCLICNYITRIIDPLASRCSKFRFRLLNNSN 194
Query: 60 IVEVLEFIAEQEGIQLPHQ-LAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
+ L++I QE I L ++ + E++ + S +LR+AI +++ +++ F
Sbjct: 195 ALNRLKYIVGQEEIALDNEDVLEEVLNISNGDLRKAITYLQSAARLHASF 244
>gi|448498600|ref|ZP_21610886.1| replication factor C small subunit [Halorubrum coriense DSM 10284]
gi|445698349|gb|ELZ50394.1| replication factor C small subunit [Halorubrum coriense DSM 10284]
Length = 327
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDEADSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ ++ IA E I++ + + + ++R+AI S +A+
Sbjct: 176 VSGMVREIAAAEEIEVTDAGVDALVYAADGDMRRAINSLQAA 217
>gi|68471103|ref|XP_720328.1| hypothetical protein CaO19.7035 [Candida albicans SC5314]
gi|77022536|ref|XP_888712.1| hypothetical protein CaO19_7035 [Candida albicans SC5314]
gi|46442191|gb|EAL01482.1| hypothetical protein CaO19.7035 [Candida albicans SC5314]
gi|76573525|dbj|BAE44609.1| hypothetical protein [Candida albicans]
gi|238883252|gb|EEQ46890.1| activator 1 41 kDa subunit [Candida albicans WO-1]
Length = 363
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + PI S C+ + + +
Sbjct: 136 IILDEADSMTNDAQSALRRTMENYAGITRFVLICNYITRIIDPITSRCSKFRFKLLNNEN 195
Query: 60 IVEVLEFIAEQEGIQL-----PHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
L++I +QE ++ HQ+ +++ S +LR+AI +++ +++ F
Sbjct: 196 AQLRLKYIGQQENLRFESENNEHQVIQELLKISGGDLRKAITYLQSAAKLSETF 249
>gi|448401318|ref|ZP_21571554.1| replication factor C small subunit 2 [Haloterrigena limicola JCM
13563]
gi|445666581|gb|ELZ19240.1| replication factor C small subunit 2 [Haloterrigena limicola JCM
13563]
Length = 335
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + P+ E
Sbjct: 123 ILLDNAENVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSFRSPTSDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+V VLE I E+EG++ E +A + NLRQAI
Sbjct: 183 LVTVLERIVEREGVEYDADGLEFVAGYADGNLRQAI 218
>gi|302308854|ref|NP_985969.2| AFR422Wp [Ashbya gossypii ATCC 10895]
gi|299790827|gb|AAS53793.2| AFR422Wp [Ashbya gossypii ATCC 10895]
Length = 349
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + P
Sbjct: 134 IILDEADSMTADAQSALRRTMETYSSVTRFCLICNYVTRIIDPLASRCSKFRFKPLDNVN 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ LE IA+QE + EK+ ++ +LR+AI + + +M
Sbjct: 194 ALGRLEQIAQQEALSYEAGALEKVLHIAEGDLRKAITLLQTAAKMT 239
>gi|448680330|ref|ZP_21690647.1| replication factor C small subunit [Haloarcula argentinensis DSM
12282]
gi|445768774|gb|EMA19851.1| replication factor C small subunit [Haloarcula argentinensis DSM
12282]
Length = 325
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E I+L + + + ++R+AI +A+
Sbjct: 174 VAEEIRNIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|119492485|ref|XP_001263608.1| DNA replication factor C subunit Rfc2, putative [Neosartorya
fischeri NRRL 181]
gi|119411768|gb|EAW21711.1| DNA replication factor C subunit Rfc2, putative [Neosartorya
fischeri NRRL 181]
Length = 420
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V++ ++P+ S C+ + P
Sbjct: 152 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRVIEPLASRCSKFRFKPLDNSA 211
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E L IA E ++L + +K+ + +LR+AI +++ ++
Sbjct: 212 AAERLAHIARLENLKLDEGVIDKLISCGEGDLRRAITYMQSAARL 256
>gi|157123250|ref|XP_001660080.1| replication factor c / DNA polymerase iii gamma-tau subunit [Aedes
aegypti]
gi|108874432|gb|EAT38657.1| AAEL009465-PA [Aedes aegypti]
Length = 330
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + P S
Sbjct: 111 IILDEADAMTNDAQNALRRIIEKYT--DNVRFCIICNYLSKIIPALQSRCTRFRFAPLSP 168
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT- 116
+I+ LE + + EGI++ + + + ++R+ + + S M Y V + T
Sbjct: 169 DQILPRLEHVIDAEGIKVSDDGKKALMTLAGGDMRKVLNVLQ-STWMAYKDVTEDNVYTC 227
Query: 117 ---GWEDDITNIATKIIEEQSPKQ 137
+ DITNI ++ +S K+
Sbjct: 228 VGHPLKIDITNIVNWLLNVESFKE 251
>gi|367055770|ref|XP_003658263.1| hypothetical protein THITE_2124823 [Thielavia terrestris NRRL 8126]
gi|347005529|gb|AEO71927.1| hypothetical protein THITE_2124823 [Thielavia terrestris NRRL 8126]
Length = 389
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 155 IILDEADAMTNTAQMALRRIMEKYTANTRFCIIANYAHKLSPALLSRCTRFRFSPLHEQD 214
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+EG+++ + + SK ++R+A+ +A + P
Sbjct: 215 IRVLVDKVIEEEGVKIMPDAVDSLVRLSKGDMRRALNVLQACHASSTPL 263
>gi|299117347|emb|CBN75303.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 354
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ +P+ S C + +
Sbjct: 138 IILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGA 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+++ L +I+ +E +++ + I D S ++R+A+ + +++ Q
Sbjct: 198 MLDRLSYISREEDVKIAADGLQAIVDLSGGDMRKAVTAMQSASQF 242
>gi|115443244|ref|XP_001218429.1| activator 1 subunit 3 [Aspergillus terreus NIH2624]
gi|114188298|gb|EAU29998.1| activator 1 subunit 3 [Aspergillus terreus NIH2624]
Length = 398
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P + +
Sbjct: 158 IILDEADAMTSTAQMALRRIMERYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEPD 217
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E I + + + + SK ++R+A+ +A + P
Sbjct: 218 IRSLVDLVVEKEQINIQPEAVDSLVTLSKGDMRRALNVLQACHASSIPL 266
>gi|401424285|ref|XP_003876628.1| putative replication factor C, subunit 4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492871|emb|CBZ28150.1| putative replication factor C, subunit 4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 360
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ A +R +E + + F C++ SK+ +PI+S C V++ S +
Sbjct: 141 VLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKIIEPIQSRCAVVRFKKLSDAD 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
I++ L ++ +QE + E + ++ +LRQA+ + +A+ Y V
Sbjct: 201 ILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNALQAT-HTGYGLVNA 251
>gi|426200510|gb|EKV50434.1| hypothetical protein AGABI2DRAFT_200125 [Agaricus bisporus var.
bisporus H97]
Length = 349
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 138 IILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSES 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
L +IA++E I + + + + S +LR+AI
Sbjct: 198 ATSRLTYIAKEEQIDVDTSVIDALITVSNGDLRRAI 233
>gi|195578467|ref|XP_002079087.1| GD22189 [Drosophila simulans]
gi|194191096|gb|EDX04672.1| GD22189 [Drosophila simulans]
Length = 227
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I++ E D+L+ DA +R +E+Y ++ + S++ P I+S C I++ P++ E
Sbjct: 132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETE 191
Query: 60 IVEVLEFIAEQEGIQLP 76
IV +L+ ++EG+ LP
Sbjct: 192 IVSILQNTCKREGLALP 208
>gi|380471924|emb|CCF47039.1| replication factor C subunit 2 [Colletotrichum higginsianum]
Length = 315
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 77 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQGN 136
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE EG+QL + + S+ +LR+AI +++ ++
Sbjct: 137 AKKRLEDIAENEGVQLEDGALDALIKCSEGDLRKAITFLQSAARL 181
>gi|453087153|gb|EMF15194.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 349
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y G + F C+ +K+ +P++S C +++ + +
Sbjct: 127 VILDEADSMTSGAQQALRRTMEIYSGTTRFAFACNQSNKIIEPLQSRCAILRYARLTDAQ 186
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
+V+ + I + E +Q + +++ ++RQAI + + S + FV
Sbjct: 187 VVKRINQICKAENVQFSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFV 235
>gi|344213231|ref|YP_004797551.1| replication factor C small subunit [Haloarcula hispanica ATCC
33960]
gi|343784586|gb|AEM58563.1| replication factor C small subunit [Haloarcula hispanica ATCC
33960]
Length = 407
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 196 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 255
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E I+L + + + ++R+AI +A+
Sbjct: 256 VAEEIRNIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 297
>gi|242019775|ref|XP_002430334.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212515458|gb|EEB17596.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 340
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y V FC C+ + K+ P I+S CT + P
Sbjct: 115 IILDEADAMTHDAQNALRRIMEKYTA--NVRFCIICNYLGKIIPAIQSRCTKFRFAPLDS 172
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+EI+ LE++ EQE I++ + + + ++R+ + +++
Sbjct: 173 KEILPRLEYVIEQEKIKISDDGKQAVLTLGQGDMRKVLNILQST 216
>gi|452981800|gb|EME81559.1| hypothetical protein MYCFIDRAFT_188590 [Pseudocercospora fijiensis
CIRAD86]
Length = 367
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P + +
Sbjct: 158 IILDEADAMTSTAQMALRRIMERYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEPD 217
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTG 117
I +++ + +EG+ + + + SK ++R+A+ +A + P V G+ + G
Sbjct: 218 IRRLVDKVIIEEGVNIASDATDSLVTLSKGDMRRALNVLQACHASSTPLHVPGEPVKEG 276
>gi|315049065|ref|XP_003173907.1| replication factor C protein subunit 3 [Arthroderma gypseum CBS
118893]
gi|311341874|gb|EFR01077.1| replication factor C protein subunit 3 [Arthroderma gypseum CBS
118893]
Length = 397
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 156 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 215
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 216 IKRLVDTVIEKEQVQIQPDAIDSLVKLSKGDMRRALNVLQACHASSMPL 264
>gi|307110140|gb|EFN58376.1| hypothetical protein CHLNCDRAFT_59565 [Chlorella variabilis]
Length = 340
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S +E
Sbjct: 124 VILDEADSMTSGAQQALRRTMEIYSSTTRFALACNQSSKIIEPIQSRCAIVRYSKLSDKE 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L + ++EG+ E + + ++RQA+ + +A+
Sbjct: 184 LLQRLLHVCQEEGVAHTPDGLEAVVFTADGDMRQALNNVQAT 225
>gi|193676219|ref|XP_001942989.1| PREDICTED: replication factor C subunit 5-like [Acyrthosiphon
pisum]
Length = 329
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E++ + V FC C+ +SK+ P ++S CT + P
Sbjct: 110 IILDEADAMTNDAQNALRRIIEKFT--DNVRFCLICNYLSKIIPALQSRCTRFRFGPLDS 167
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT- 116
++I+ LE++ EQE +++ + + D ++ ++R+ + + S +P V + T
Sbjct: 168 KQIMPRLEYVVEQEKVKVTEDGKKALIDLAQGDMRKVLNILQ-SAATAFPEVNEDSVYTC 226
Query: 117 ---GWEDDITNI 125
+ DI NI
Sbjct: 227 VGHPLKSDIMNI 238
>gi|150400153|ref|YP_001323920.1| replication factor C small subunit [Methanococcus vannielii SB]
gi|166225157|sp|A6US36.1|RFCS_METVS RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|150012856|gb|ABR55308.1| Replication factor C [Methanococcus vannielii SB]
Length = 315
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E+D L++DA +R +E+Y + + C+ SK+ PI+S C + + P ++
Sbjct: 104 IFLDESDALTSDAQNALRRTMEKYSDICRFVLSCNYPSKIIPPIQSRCAIFRFSPLKTED 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+V+ L+ I+E+E I + + I S+ ++R+AI
Sbjct: 164 LVKNLKEISEKESINVEKSGMDAIIYVSEGDMRKAI 199
>gi|307170254|gb|EFN62614.1| Replication factor C subunit 5 [Camponotus floridanus]
Length = 329
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + LP +
Sbjct: 114 IILDEADAMTIDAQNALRRIIEKYT--DNVRFCIICNYLSKIIPALQSRCTRFRFLPLAA 171
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++I+ L ++ E E +++ E + S ++R+ + +++
Sbjct: 172 EQIIPRLNYVIEAENLKVTEDGKEALMTLSGGDMRKVLSVLQST 215
>gi|448503811|ref|ZP_21613440.1| replication factor C small subunit 2 [Halorubrum coriense DSM
10284]
gi|445692012|gb|ELZ44195.1| replication factor C small subunit 2 [Halorubrum coriense DSM
10284]
Length = 349
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I ++EG++ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICDREGVEYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|403350390|gb|EJY74655.1| ATPase, AAA family protein [Oxytricha trifallax]
Length = 374
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E+Y + C+ +SK + P+ S C + P +K+
Sbjct: 157 IILDEADSMTIDAQAALRRIIEQYSTNTRFCIICNYISKIIDPLASRCVKFRFSPIAKEA 216
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFEAS 101
+E L+ I E+E + + + + D S +LR++I + + +
Sbjct: 217 QIERLKMICERENVNVASDNVFNALVDISAGDLRRSINTLQTA 259
>gi|322787624|gb|EFZ13664.1| hypothetical protein SINV_05560 [Solenopsis invicta]
Length = 204
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + LP +
Sbjct: 36 IILDEADAMTIDAQNALRRIIEKYT--DNVRFCIICNYLSKIIPALQSRCTRFRFLPLAA 93
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++I+ L + E E +Q+ E + S ++R+ I +++
Sbjct: 94 EQIMPRLNHVIEAEKLQVTENGKEALMTLSGGDMRKVISVLQST 137
>gi|451854539|gb|EMD67832.1| hypothetical protein COCSADRAFT_112005 [Cochliobolus sativus
ND90Pr]
Length = 394
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P Q+
Sbjct: 156 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQD 215
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E + + + + SK ++R+A+ +A + P
Sbjct: 216 IRHLVDKVIEEEKVNITQDATDSLVTLSKGDMRRALNVLQACHASSTPL 264
>gi|448441571|ref|ZP_21589178.1| replication factor C small subunit 2 [Halorubrum saccharovorum DSM
1137]
gi|445688607|gb|ELZ40858.1| replication factor C small subunit 2 [Halorubrum saccharovorum DSM
1137]
Length = 379
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 153 VLLDNAEAIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRAPTTDE 212
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I E+EG+ E +A + +LR+AI S +A+
Sbjct: 213 TIDVLETICEREGVDYDGDGLEFVASAAGGDLREAILSAQAT 254
>gi|256077102|ref|XP_002574847.1| replication factor C / DNA polymerase III gamma-tau subunit
[Schistosoma mansoni]
gi|353229166|emb|CCD75337.1| putative replication factor C / DNA polymerase III gamma-tau
subunit [Schistosoma mansoni]
Length = 468
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E Y + C+D SKL +PI+S C V++ + +
Sbjct: 255 IILDEADSMTEGAQQALRRIMELYSRTTRFALACNDSSKLIEPIQSRCAVLRYARLTSAQ 314
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
++ L ++ EG+ + E I + ++RQA+ + +++ +
Sbjct: 315 VMARLLEVSRFEGVSYTEEGLEAIVFTADGDMRQALNNLQSTHE 358
>gi|407837802|gb|EKF99863.1| replication factor C, subunit 4, putative [Trypanosoma cruzi]
Length = 340
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E + + F C++ K+ +PI+S C V++ + +
Sbjct: 125 VILDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFKKLTHAD 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L +I +QE + E + ++ +LR A+ + +A+ Q Y V + +
Sbjct: 185 ILKRLTYIIQQENVTYTDDGLEALLYLAEGDLRSAVNALQAT-QSGYGMVNAENVF 239
>gi|388582885|gb|EIM23188.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 331
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +PI+S C +++ E
Sbjct: 112 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPIQSRCAILRFSKLRDIE 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR 102
+++ L IAE+E + + E + S+ ++RQA+ + +++
Sbjct: 172 LLQRLRQIAEKENADVTDEGYEALIFTSEGDMRQAVNNLQSTH 214
>gi|170094016|ref|XP_001878229.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646683|gb|EDR10928.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 359
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V+++ +P+ S C+ + P +
Sbjct: 138 IILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSKS 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
L +IA E I + + S +LR+AI +++ +++ + IL
Sbjct: 198 SFSRLSYIATAEHIDTNPAVINALISTSSGDLRRAITYLQSASRLSSSTIPPTPIL---P 254
Query: 120 DDITNIA 126
DI IA
Sbjct: 255 SDIQEIA 261
>gi|448307213|ref|ZP_21497113.1| replication factor C small subunit 2 [Natronorubrum bangense JCM
10635]
gi|445596191|gb|ELY50284.1| replication factor C small subunit 2 [Natronorubrum bangense JCM
10635]
Length = 334
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + L PS +E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSLRAPSSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE I E EG+ E +A + NLRQA+
Sbjct: 183 TVTVLERIVEAEGVAYEPDGLEFVAGYAGGNLRQAV 218
>gi|396495754|ref|XP_003844622.1| similar to replication factor C subunit 3 [Leptosphaeria maculans
JN3]
gi|312221202|emb|CBY01143.1| similar to replication factor C subunit 3 [Leptosphaeria maculans
JN3]
Length = 409
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P Q+
Sbjct: 171 IILDEADAMTATAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQD 230
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E + + + + SK ++R+A+ +A + P
Sbjct: 231 IRNLVDKVIEEENVNITQDATDSLVSLSKGDMRRALNVLQACHASSTPL 279
>gi|356509405|ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
Length = 363
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 144 VLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVH 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L+ + + EG+ + + S ++R+A+ +++ + E V L TG
Sbjct: 204 VTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEETVYLCTGN 263
Query: 118 -WEDDITNIATKIIEEQ 133
DI I+ ++ EQ
Sbjct: 264 PLPKDIEQISYWLLNEQ 280
>gi|70985298|ref|XP_748155.1| DNA replication factor C subunit Rfc3 [Aspergillus fumigatus Af293]
gi|66845783|gb|EAL86117.1| DNA replication factor C subunit Rfc3, putative [Aspergillus
fumigatus Af293]
gi|159125922|gb|EDP51038.1| DNA replication factor C subunit Rfc3, putative [Aspergillus
fumigatus A1163]
Length = 396
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P +Q+
Sbjct: 159 IILDEADAMTSTAQMALRRIMERYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E I++ + + SK ++R+A+ +A + P
Sbjct: 219 IRSLVDQVIEKEQIRIQPEAVSSLVRLSKGDMRRALNVLQACHASSRPL 267
>gi|66359384|ref|XP_626870.1| replication factor RFC3 AAA+ ATpase [Cryptosporidium parvum Iowa
II]
gi|46228358|gb|EAK89257.1| replication factor RFC3 AAA+ ATpase [Cryptosporidium parvum Iowa
II]
Length = 383
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD +++ A + +R ++ERY V FC C+ V+K+ P ++S CT + P
Sbjct: 143 IILDEADMMTSTAQMALRRIMERYS--EHVRFCIICNYVNKITPALQSRCTRFRFSPLPI 200
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
++I + IA E I + + E + +S+ ++R+ + ++ NY +E
Sbjct: 201 EDIRNRISEIALSERIFITREGQESLIKSSRGDMRKVLNVLQSCSMSNYGNIE 253
>gi|449548327|gb|EMD39294.1| hypothetical protein CERSUDRAFT_152406 [Ceriporiopsis subvermispora
B]
Length = 357
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 140 IILDEADMMTTAAQAALRRVIEQYT--KNVRFCIICNYVNKIVPAIQSRCTRFRFSPLPI 197
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
E+ + L+ + E EG++L + + SK ++R+A+ +A
Sbjct: 198 SEVEKRLQKVIESEGVKLTDDGKKALLKLSKGDMRRALNVLQA 240
>gi|410720678|ref|ZP_11360031.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410600389|gb|EKQ54917.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 321
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y + C+ SK+ PI+S C + + P +
Sbjct: 103 IFLDEVDNMTKDAQHALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFAPIKGHQ 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+++ LE IA+ E + E I ++ ++R+A+ +++ M
Sbjct: 163 VIKRLEVIAKAENVNYAPGTLESIVYFAEGDMRRAVNILQSTASMG 208
>gi|403216588|emb|CCK71084.1| hypothetical protein KNAG_0G00260 [Kazachstania naganishii CBS
8797]
Length = 350
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ ++++ P+ S C+ + +
Sbjct: 135 IILDEADSMTADAQSALRRTMETYSSVTRFCLICNYITRIIDPLASRCSKFRFKSLDESN 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM-NY 106
++ L+++A+QE + EKI S +LR+AI ++S ++ NY
Sbjct: 195 AMDRLQYVAKQESVICEDGALEKILIVSSGDLRKAITLLQSSSKLRNY 242
>gi|222480925|ref|YP_002567162.1| replication factor C small subunit 2 [Halorubrum lacusprofundi ATCC
49239]
gi|222453827|gb|ACM58092.1| AAA ATPase central domain protein [Halorubrum lacusprofundi ATCC
49239]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRAPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I E+EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICEREGVDYDGNGLEFVASAAGGDLRKAILSAQAT 224
>gi|124485340|ref|YP_001029956.1| replication factor C small subunit [Methanocorpusculum labreanum Z]
gi|158512813|sp|A2SQT3.1|RFCS_METLZ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|124362881|gb|ABN06689.1| replication factor C small subunit [Methanocorpusculum labreanum Z]
Length = 321
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+ DA +R +E Y + C+ SK+ PI+S C + + P + +
Sbjct: 107 LFLDEADALTQDAQAALRRTMENYAETCRFILSCNYSSKIIDPIQSRCAIYRFRPLTDEA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E + IA++EGI + I S ++R+AI + + +
Sbjct: 167 ISEEIARIAKKEGITIDEGAYVAITYVSLGDMRKAINALQGA 208
>gi|169771859|ref|XP_001820399.1| replication factor C subunit 3 [Aspergillus oryzae RIB40]
gi|83768258|dbj|BAE58397.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874706|gb|EIT83551.1| replication factor C, subunit RFC5 [Aspergillus oryzae 3.042]
Length = 398
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 157 IILDEADAMTATAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 216
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +++ + + + SK ++R+A+ +A + P
Sbjct: 217 IRSLVDLVIEKEEVKIQPEAVDSLVKLSKGDMRRALNVLQACHASSIPL 265
>gi|71745690|ref|XP_827475.1| replication factor C subunit 3 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831640|gb|EAN77145.1| replication factor C, subunit 3, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261331678|emb|CBH14672.1| replication factor C, subunit 3, putative [Trypanosoma brucei
gambiense DAL972]
Length = 357
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S+DA +R ++E++ V FC C+ ++K+ P ++S CT + P K
Sbjct: 129 VILDEADQMSSDAQAALRRIIEKFT--KNVRFCILCNHINKIIPALQSRCTRFRFSPVKK 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+ IA +EG+ + S ++R+ + + +AS
Sbjct: 187 SAMLPRLKLIAREEGVPFTDEGLISAFRLSDGDMRRCLNTMQAS 230
>gi|386783685|gb|AFJ24737.1| replication factor C subunit 2, partial [Schmidtea mediterranea]
Length = 341
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL E D ++ A +R +E Y + F C+D SK+ +PI+S C +++ S E
Sbjct: 124 IILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSE 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ 103
I+ L I + E + E I ++ ++RQAI + E + +
Sbjct: 184 ILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 227
>gi|156057403|ref|XP_001594625.1| hypothetical protein SS1G_04432 [Sclerotinia sclerotiorum 1980]
gi|154702218|gb|EDO01957.1| hypothetical protein SS1G_04432 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 412
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + K
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSRITRFCLICNYVTRIIDPLASRCSKFRFKSLDKGN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
V ++ IA++EG++L E + S+ +LR+AI +++ ++
Sbjct: 205 AVVRVKEIADKEGVKLEEGAVEALIRCSEGDLRKAITYLQSAARL 249
>gi|14325757|dbj|BAB60660.1| replication factor C subunit [Thermoplasma volcanium GSS1]
Length = 330
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L EAD+L+ +A +R +E Y + F C+ SK + PI+S V++ P +
Sbjct: 116 LFLDEADQLTAEAQAALRRTMEMYSETTRFVFACNYSSKIIPPIQSRTVVMRFRPVQDEF 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I + L IA+ EG + + E + + S ++R+AI +A
Sbjct: 176 IKKKLNEIAKNEGFTIDDESMEAMVEVSGGDMRKAINVLQA 216
>gi|242074030|ref|XP_002446951.1| hypothetical protein SORBIDRAFT_06g025740 [Sorghum bicolor]
gi|241938134|gb|EES11279.1| hypothetical protein SORBIDRAFT_06g025740 [Sorghum bicolor]
Length = 333
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 117 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 177 ILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 218
>gi|13542322|ref|NP_112010.1| replication factor C small subunit [Thermoplasma volcanium GSS1]
gi|73920753|sp|Q977Z9.2|RFCS_THEVO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
Length = 318
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+ L EAD+L+ +A +R +E Y + F C+ SK + PI+S V++ P +
Sbjct: 104 LFLDEADQLTAEAQAALRRTMEMYSETTRFVFACNYSSKIIPPIQSRTVVMRFRPVQDEF 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
I + L IA+ EG + + E + + S ++R+AI +A
Sbjct: 164 IKKKLNEIAKNEGFTIDDESMEAMVEVSGGDMRKAINVLQA 204
>gi|448463157|ref|ZP_21597935.1| replication factor C small subunit 2 [Halorubrum kocurii JCM 14978]
gi|445817152|gb|EMA67028.1| replication factor C small subunit 2 [Halorubrum kocurii JCM 14978]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRAPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I E+EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICEREGVDRDDDGLEFVASAAGGDLREAILSAQAT 224
>gi|328855833|gb|EGG04957.1| hypothetical protein MELLADRAFT_72257 [Melampsora larici-populina
98AG31]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 129 IILDEADSMTSGAQQALRRTMEIYANSTRFALACNFSSKIIEPIQSRCAILRYGKLSDQE 188
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L I + E ++ ++ I ++ ++RQAI + +++ + FV + +
Sbjct: 189 ILKRLVEICDAENVKYANEGLAAIIFTAEGDMRQAINNLQSTVS-GFEFVSSEAVF 243
>gi|357165331|ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-like [Brachypodium
distachyon]
Length = 333
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 118 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 178 ILGRLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 219
>gi|357137885|ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-like [Brachypodium
distachyon]
Length = 358
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 139 VLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSH 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L+ I + EG+ + + S ++R+A+ +++ + E V L TG
Sbjct: 199 VSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTHMASQQITEEAVYLCTGN 258
Query: 118 -WEDDITNIATKIIEE 132
DI IA ++ E
Sbjct: 259 PMPKDIEQIAFWLLNE 274
>gi|353238813|emb|CCA70747.1| probable RFC3-DNA replication factor C, 40 kDa subunit
[Piriformospora indica DSM 11827]
Length = 346
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 129 IILDEADMMTQAAQAALRRVIEQYT--RNVRFCIICNYVNKITPAIQSRCTRFRFSPLPV 186
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
E+ + L+ + E EG+++ + E + S+ ++R+A+ +A Y + + I T
Sbjct: 187 SEVEKRLQTVIENEGVKVSPEGKEALLKLSRGDMRRALNVLQAC-HAAYDITDEEAIYTC 245
Query: 118 WED----DITNIATKIIEEQ 133
+ DI N+ ++ ++
Sbjct: 246 TGNPHPKDIENVVNSMMSQE 265
>gi|448475487|ref|ZP_21603142.1| replication factor C small subunit 2 [Halorubrum aidingense JCM
13560]
gi|445816479|gb|EMA66376.1| replication factor C small subunit 2 [Halorubrum aidingense JCM
13560]
Length = 349
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRAPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I E+EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICEREGVTYDADGLEFVASAAGGDLREAILSAQAT 224
>gi|424513766|emb|CCO66388.1| replication factor C subunit 2 [Bathycoccus prasinos]
Length = 373
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A MR +E Y + C+ K+ +PI+S C +++ S ++
Sbjct: 126 IILDEADAMTKGAQQAMRRTMEIYSATTRFALACNLSDKIIEPIQSRCAIVRFSRLSDKQ 185
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
++E L ++ EQE + + E I ++ ++R A+ S +A
Sbjct: 186 VLERLVYVCEQEKVPHDARGLEAIVFCAEGDMRNALNSLQA 226
>gi|119499175|ref|XP_001266345.1| DNA replication factor C subunit Rfc3, putative [Neosartorya
fischeri NRRL 181]
gi|119414509|gb|EAW24448.1| DNA replication factor C subunit Rfc3, putative [Neosartorya
fischeri NRRL 181]
Length = 396
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P +Q+
Sbjct: 159 IILDEADAMTSTAQMALRRIMERYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E I + + + SK ++R+A+ +A + P
Sbjct: 219 IRSLVDQVIEKEQIHIQPEAVSSLVRLSKGDMRRALNVLQACHASSKPL 267
>gi|448375340|ref|ZP_21558906.1| replication factor C small subunit 2 [Halovivax asiaticus JCM
14624]
gi|445658894|gb|ELZ11707.1| replication factor C small subunit 2 [Halovivax asiaticus JCM
14624]
Length = 334
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 LLLDNAEAVREDFQQALRRIMEQHHRTTRFIVTTRQPTKLIPPIRSRCFPVTMRAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E EG++ E +A + NLR+AI
Sbjct: 183 IVSVLEPIVEAEGVEYDADGLEFVAGYAGGNLREAI 218
>gi|326512276|dbj|BAJ96119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 335
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 120 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 180 ILGRLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 221
>gi|339898595|ref|XP_003392626.1| putative replication factor C, subunit 4 [Leishmania infantum
JPCM5]
gi|321398414|emb|CBZ08802.1| putative replication factor C, subunit 4 [Leishmania infantum
JPCM5]
Length = 360
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ A +R +E + + F C++ S++ +PI+S C V++ S +
Sbjct: 141 VLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSRIIEPIQSRCAVVRFKKLSDAD 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
I++ L ++ +QE + E + ++ +LRQA+ + +A+ Y V
Sbjct: 201 ILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNALQAT-HTGYGLVNA 251
>gi|398392868|ref|XP_003849893.1| hypothetical protein MYCGRDRAFT_110326 [Zymoseptoria tritici
IPO323]
gi|339469771|gb|EGP84869.1| hypothetical protein MYCGRDRAFT_110326 [Zymoseptoria tritici
IPO323]
Length = 460
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P + +
Sbjct: 161 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEVD 220
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVILTGW 118
I ++++ + +E + + + + SK ++R+A+ +A + P V G+ + TG
Sbjct: 221 IRQLVDKVVREEDVNIAPDATDSLVTLSKGDMRRALNVLQACHASSTPLNVPGEKVKTGK 280
Query: 119 E---DDITN 124
+ D ITN
Sbjct: 281 DITRDLITN 289
>gi|433637534|ref|YP_007283294.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
gi|433289338|gb|AGB15161.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
Length = 334
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 LLLDNAEAVREDFQQALRRIMEQHHRTTRFIVTTRQPTKLIPPIRSRCFPVTMRAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E EG++ E +A + NLR+AI
Sbjct: 183 IVSVLEPIVEAEGVEYDADGLEFVAGYAGGNLREAI 218
>gi|195628076|gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 143 VLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSH 202
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L+ I + EG+ + + S ++R+A+ +++ + E V L TG
Sbjct: 203 VRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGN 262
Query: 118 -WEDDITNIATKIIEE 132
DI IA ++ E
Sbjct: 263 PMPKDIEQIAFWLLNE 278
>gi|88602285|ref|YP_502463.1| replication factor C small subunit [Methanospirillum hungatei JF-1]
gi|110287812|sp|Q2FQT9.1|RFCS_METHJ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|88187747|gb|ABD40744.1| replication factor C small subunit [Methanospirillum hungatei JF-1]
Length = 323
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ +K+ PI+S C + + P +Q
Sbjct: 107 LFLDEADALTTDAQSALRRTMETYAQTCRFILSCNYSAKIIDPIQSRCAIYRFRPLGRQA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E+++ I+ + + + ++ + I ++ ++R+AI + + +
Sbjct: 167 VSEMVKRISADQNLTVTEEVIDAIFYVAQGDMRKAINALQGA 208
>gi|303390791|ref|XP_003073626.1| replication factor C [Encephalitozoon intestinalis ATCC 50506]
gi|303302773|gb|ADM12266.1| replication factor C [Encephalitozoon intestinalis ATCC 50506]
Length = 309
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++T A MR ++E + + C+ ++K+ +PI+S C +++
Sbjct: 100 IILDEADSMTTAAQQAMRRVMEVHSSECRFILICNTLTKIFEPIQSRCAILRFDRIENSM 159
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI 114
I+E L I++ EGI++ + + I + S ++RQ++ +A + +G +I
Sbjct: 160 ILERLREISKDEGIKISKEALDLIVELSDGDMRQSLNILQACISSSETIDQGYII 214
>gi|154324182|ref|XP_001561405.1| hypothetical protein BC1G_00490 [Botryotinia fuckeliana B05.10]
Length = 344
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + K
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSRITRFCLICNYVTRIIDPLASRCSKFRFKSLDKGN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
V + IA++EG++L E + S+ +LR+AI +++ ++
Sbjct: 205 AVVRVREIADKEGVRLEEGAVEALIKCSEGDLRKAITYLQSAARL 249
>gi|451999620|gb|EMD92082.1| hypothetical protein COCHEDRAFT_1193657 [Cochliobolus
heterostrophus C5]
Length = 392
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
I+L EAD +++ A + +R ++E+Y + + KL P + S CT + P Q+
Sbjct: 154 IVLDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQD 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E + + + + SK ++R+A+ +A + P
Sbjct: 214 IRHLVDKVIEEEKVNITQDATDSLVTLSKGDMRRALNVLQACHASSTPL 262
>gi|396478172|ref|XP_003840471.1| similar to replication factor C subunit [Leptosphaeria maculans
JN3]
gi|312217043|emb|CBX96992.1| similar to replication factor C subunit [Leptosphaeria maculans
JN3]
Length = 350
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 131 VILDEADSMTSGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCAILRYARLTDAQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V + I E E +Q + +++ ++RQAI + + S + FV G +
Sbjct: 191 VVRRVMQICEAEDVQYSDDGIAALVFSAEGDMRQAINNLQ-STHAGFGFVNGDNVF 245
>gi|213403013|ref|XP_002172279.1| replication factor C subunit 2 [Schizosaccharomyces japonicus
yFS275]
gi|212000326|gb|EEB05986.1| replication factor C subunit 2 [Schizosaccharomyces japonicus
yFS275]
Length = 340
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R +E + + C+ V+++ P+ S C+ + P Q+
Sbjct: 128 VILDEADSMTQDAQAALRRTMEATARITRFCLVCNYVTRIIDPLASRCSKYRFKPLDAQD 187
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + LEFIA + + L + + + S ++R+AI +++ ++
Sbjct: 188 IAKRLEFIAADQTVALEPGVIDALVSVSGGDMRKAITFLQSAATLH 233
>gi|219363377|ref|NP_001136580.1| replication factor C subunit 3 [Zea mays]
gi|194696262|gb|ACF82215.1| unknown [Zea mays]
gi|413939151|gb|AFW73702.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 143 VLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSH 202
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L+ I + EG+ + + S ++R+A+ +++ + E V L TG
Sbjct: 203 VRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGN 262
Query: 118 -WEDDITNIATKIIEE 132
DI IA ++ E
Sbjct: 263 PMPKDIEQIAFWLLNE 278
>gi|169626367|ref|XP_001806584.1| hypothetical protein SNOG_16470 [Phaeosphaeria nodorum SN15]
gi|111055048|gb|EAT76168.1| hypothetical protein SNOG_16470 [Phaeosphaeria nodorum SN15]
Length = 393
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P Q+
Sbjct: 155 IILDEADAMTATAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQD 214
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E E + + A + SK ++R+A+ +A + P
Sbjct: 215 IRNLVDKVIEDEKVNITQDAASSLVTLSKGDMRRALNVLQACHASSTPL 263
>gi|48477659|ref|YP_023365.1| replication factor C small subunit [Picrophilus torridus DSM 9790]
gi|50400868|sp|Q6L1I0.1|RFCS_PICTO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|48430307|gb|AAT43172.1| replication factor C, small subunit [Picrophilus torridus DSM 9790]
Length = 318
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD+L+ +A +R +E + + F C+ SK+ PI+S C V++ P K+
Sbjct: 104 IFLDEADQLTNEAQAALRRTMEMFYSTTRFIFSCNYSSKIIPPIQSRCVVLRFRPLDKEA 163
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ L IA+ E + + I + S ++R+AI +A
Sbjct: 164 MERKLREIAKNEKFDIDDDSLDAIYEISDGDMRKAINVMQA 204
>gi|393218168|gb|EJD03656.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 338
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ +K+ +PI+S C +++ QE
Sbjct: 119 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAILRYAKLRDQE 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
I++ L I E E +Q + S+ ++RQAI + +++ + FV G
Sbjct: 179 ILKRLLEICEMEQVQYNDDGLTALIFTSEGDMRQAINNLQSTHS-GFGFVSG 229
>gi|448727073|ref|ZP_21709450.1| replication factor C small subunit 2 [Halococcus morrhuae DSM 1307]
gi|445792273|gb|EMA42884.1| replication factor C small subunit 2 [Halococcus morrhuae DSM 1307]
Length = 334
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++ER+ + SKL PI+S C I + P+ E
Sbjct: 125 ILLDNAEAIREDFQQALRRVMERHHETTQFVVTTRQPSKLIPPIRSRCFSIAVRAPTADE 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I +E ++ E +A+ + +LRQAI
Sbjct: 185 IVSVLEHIVAEEDVEHDADGLEYVANYADGDLRQAI 220
>gi|448433373|ref|ZP_21585894.1| replication factor C small subunit 2 [Halorubrum tebenquichense DSM
14210]
gi|445686386|gb|ELZ38710.1| replication factor C small subunit 2 [Halorubrum tebenquichense DSM
14210]
Length = 349
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I ++EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLEAICDREGVDYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|389745640|gb|EIM86821.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 358
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 138 IILDEADMMTTAAQAALRRVIEQY--TKNVRFCIICNYVNKIVPAIQSRCTRFRFSPLPM 195
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+E+ + ++ + EG++L + + SK ++R+A+ +A
Sbjct: 196 KEVEKRVDHVVAAEGVKLTEDGKKALLKLSKGDMRRALNILQA 238
>gi|354492255|ref|XP_003508264.1| PREDICTED: replication factor C subunit 4 [Cricetulus griseus]
gi|344245879|gb|EGW01983.1| Replication factor C subunit 4 [Cricetulus griseus]
Length = 362
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E+ + C+ VS++ +P+ S C+ + P S +
Sbjct: 145 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKI 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
E L IAE+E +++ H++ + S+ +LR+AI F++ LTG +
Sbjct: 205 QRERLLDIAEKENVKISHEVIAYLVKVSEGDLRKAI-----------TFLQSATRLTGGK 253
Query: 120 DDITNIATKI 129
+ + ++ T I
Sbjct: 254 EVMRDVITDI 263
>gi|225554309|gb|EEH02609.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|240277074|gb|EER40584.1| activator 1 37 kDa subunit [Ajellomyces capsulatus H143]
gi|325095015|gb|EGC48325.1| activator 1 37 kDa subunit [Ajellomyces capsulatus H88]
Length = 354
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSTTTRFAFACNQSNKIIEPLQSRCAILRYARLTDGQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L I E E ++ E + +++ ++RQAI + + S + FV G+ +
Sbjct: 190 ILKRLTQICEAEKVKYSEDGLEALIFSAEGDMRQAINNLQ-STWAGFGFVSGENVF 244
>gi|448535940|ref|ZP_21622324.1| replication factor C small subunit 2 [Halorubrum hochstenium ATCC
700873]
gi|445702749|gb|ELZ54690.1| replication factor C small subunit 2 [Halorubrum hochstenium ATCC
700873]
Length = 349
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I ++EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLEAICDREGVDYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|356563210|ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 332
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ +K+ +PI+S C +++ S QE
Sbjct: 116 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQE 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + + E + + E I + ++RQA+ + +A+
Sbjct: 176 ILGRLMVVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 217
>gi|347829788|emb|CCD45485.1| similar to replication factor C subunit [Botryotinia fuckeliana]
Length = 379
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + K
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSRITRFCLICNYVTRIIDPLASRCSKFRFKSLDKGN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
V + IA++EG++L E + S+ +LR+AI +++ ++
Sbjct: 205 AVVRVREIADKEGVRLEEGAVEALIKCSEGDLRKAITYLQSAARL 249
>gi|326475565|gb|EGD99574.1| DNA replication factor C subunit Rfc3 [Trichophyton tonsurans CBS
112818]
gi|326483166|gb|EGE07176.1| DNA replication factor C subunit Rfc3 [Trichophyton equinum CBS
127.97]
Length = 397
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 156 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEKD 215
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 216 IRRLVDTVIEKEEVQIQPDAVDSLVTLSKGDMRRALNVLQACHASSMPL 264
>gi|154276822|ref|XP_001539256.1| activator 1 37 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150414329|gb|EDN09694.1| activator 1 37 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 354
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSTTTRFAFACNQSNKIIEPLQSRCAILRYARLTDGQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L I E E ++ E + +++ ++RQAI + + S + FV G+ +
Sbjct: 190 ILKRLTQICEAEKVKYSEDGLEALIFSAEGDMRQAINNLQ-STWAGFGFVSGENVF 244
>gi|356514052|ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 331
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ +K+ +PI+S C +++ S QE
Sbjct: 115 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQE 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + + E + + E I + ++RQA+ + +A+
Sbjct: 175 ILGRLMVVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 216
>gi|367037019|ref|XP_003648890.1| hypothetical protein THITE_2106865 [Thielavia terrestris NRRL 8126]
gi|346996151|gb|AEO62554.1| hypothetical protein THITE_2106865 [Thielavia terrestris NRRL 8126]
Length = 358
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 136 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRFAKLTDAQ 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 196 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 250
>gi|448683820|ref|ZP_21692440.1| replication factor C small subunit [Haloarcula japonica DSM 6131]
gi|445783393|gb|EMA34222.1| replication factor C small subunit [Haloarcula japonica DSM 6131]
Length = 325
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + P +
Sbjct: 114 IFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDA 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ + + IA +E I+L + + + ++R+AI +A+
Sbjct: 174 VADEIRNIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAA 215
>gi|296817467|ref|XP_002849070.1| replication factor C subunit 3 [Arthroderma otae CBS 113480]
gi|238839523|gb|EEQ29185.1| replication factor C subunit 3 [Arthroderma otae CBS 113480]
Length = 397
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 156 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEQD 215
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I ++++ + ++E +Q+ + + SK ++R+A+ +A + P
Sbjct: 216 IRKLVDTVIDKEQVQIQPDAIDSLVKLSKGDMRRALNVLQACHASSMPL 264
>gi|51467970|ref|NP_001003862.1| replication factor C subunit 5 [Danio rerio]
gi|49618977|gb|AAT68073.1| replication factor C subunit RFC5 [Danio rerio]
Length = 334
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E++ + C+ +SK+ P ++S CT + P S+ +
Sbjct: 116 VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
++ LE + +QE I + + I S ++R+++ + S M Y V + + T
Sbjct: 176 MIPRLEHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQ-STHMAYGKVTEETVYTCTG 234
Query: 117 -GWEDDITNI 125
DI NI
Sbjct: 235 HPLRSDIANI 244
>gi|403163867|ref|XP_003323926.2| replication factor C subunit 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164648|gb|EFP79507.2| replication factor C subunit 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 342
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + C++ SK+ +PI+S C +++ QE
Sbjct: 123 IILDEADSMTAGAQQALRRTMEIYSNTTRFALACNNSSKIIEPIQSRCAILRYGKLKDQE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+++ L IA E ++ + S+ ++RQAI + +++ + FV + +
Sbjct: 183 VLKRLVEIATAENVKYAEDGLAALIFTSEGDMRQAINNLQSTVS-GFGFVSAESVF 237
>gi|448320843|ref|ZP_21510328.1| replication factor C small subunit 2 [Natronococcus amylolyticus
DSM 10524]
gi|445605270|gb|ELY59200.1| replication factor C small subunit 2 [Natronococcus amylolyticus
DSM 10524]
Length = 334
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVSVRAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE I + EG+ + E +A + NLRQAI
Sbjct: 183 TVAVLERIVDAEGVDYDDEGLEFVAGYANGNLRQAI 218
>gi|342876153|gb|EGU77811.1| hypothetical protein FOXB_11675 [Fusarium oxysporum Fo5176]
Length = 382
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQSN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM---NYPF--VEGQVI 114
LE IAE+EG+ L + + S+ +LR+AI +++ ++ N P EG +
Sbjct: 205 AKRRLEEIAEKEGVALEDGAVDALIKCSEGDLRKAITFLQSAARLVSANAPDKEAEGDEV 264
Query: 115 LTGWEDDITNIATKIIEE 132
+ + D + KI+E+
Sbjct: 265 M---DVDKKAVTVKIVED 279
>gi|296421403|ref|XP_002840254.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636469|emb|CAZ84445.1| unnamed protein product [Tuber melanosporum]
Length = 372
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V++ + P+ S C+ + P ++
Sbjct: 146 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKPLDEEN 205
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
LE IA+ E ++ + + + S+ +LR+AI +++ +++ P +
Sbjct: 206 AKLRLEEIAKMENVEYEDGVIDALIKVSEGDLRKAITYLQSAARLHNPII 255
>gi|302690912|ref|XP_003035135.1| hypothetical protein SCHCODRAFT_52161 [Schizophyllum commune H4-8]
gi|300108831|gb|EFJ00233.1| hypothetical protein SCHCODRAFT_52161 [Schizophyllum commune H4-8]
Length = 376
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E + + + C+ V+++ +P+ S C+ + P
Sbjct: 142 IILDEADSMTQDAQGALRRIMETHARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSSS 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
L +IA E + + + + + S +LR+AI +++ +++
Sbjct: 202 AAARLSYIATNENVAVSPPVIDTLISTSGGDLRRAITYLQSASRLS 247
>gi|449460473|ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ + QE
Sbjct: 115 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQE 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
I+ L + + E + + E I + ++RQA+ + +A+ + FV
Sbjct: 175 ILGRLMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHS-GFRFV 223
>gi|448346774|ref|ZP_21535655.1| replication factor C small subunit 2 [Natrinema altunense JCM
12890]
gi|445631727|gb|ELY84954.1| replication factor C small subunit 2 [Natrinema altunense JCM
12890]
Length = 334
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL P++S C + L P+ +
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPLRSRCFPVSLPAPTSEA 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREGVDYDADGLEFVAGYANGNLRQAI 218
>gi|448304145|ref|ZP_21494089.1| replication factor C small subunit [Natronorubrum sulfidifaciens
JCM 14089]
gi|445591898|gb|ELY46094.1| replication factor C small subunit [Natronorubrum sulfidifaciens
JCM 14089]
Length = 329
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + S+
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELSEDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IAE EGI + + + + ++R+AI + +A+ M
Sbjct: 177 IEAQIREIAEIEGITVTDDGIDALVYAADGDMRKAINALQAAAVMG 222
>gi|63102390|gb|AAH95222.1| Rfc5 protein [Danio rerio]
gi|182889646|gb|AAI65456.1| Replication factor C (activator 1) 5 [Danio rerio]
Length = 334
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E++ + C+ +SK+ P ++S CT + P S+ +
Sbjct: 116 VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
++ LE + +QE I + + I S ++R+++ +++ M Y V + + T
Sbjct: 176 MIPRLEHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQST-HMAYGKVTEETVYTCTG 234
Query: 117 -GWEDDITNI 125
DI NI
Sbjct: 235 HPLRSDIANI 244
>gi|198426342|ref|XP_002130063.1| PREDICTED: similar to Replication factor C (activator 1) 2, 40kDa
[Ciona intestinalis]
Length = 336
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ A +R +E Y + C+ K+ +PI+S C V++ S ++
Sbjct: 119 IILDEADSMTSGAQQALRRTMEIYSKTTRFALACNQSDKIIEPIQSRCAVLRYSKLSDEQ 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
I+ L + ++EG++ E + ++ ++RQA+ + +++ Q + F+
Sbjct: 179 ILSRLMEVIDKEGVRYDDSGLEALLFTAQGDMRQALNNLQSTHQ-GFSFI 227
>gi|336472626|gb|EGO60786.1| hypothetical protein NEUTE1DRAFT_144139 [Neurospora tetrasperma
FGSC 2508]
gi|350294141|gb|EGZ75226.1| putative replication factor C [Neurospora tetrasperma FGSC 2509]
Length = 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRFAKLTDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 249
>gi|28950096|emb|CAD70859.1| probable REPLICATION FACTOR C (40 KDA SUBUNIT) [Neurospora crassa]
Length = 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRFAKLTDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 249
>gi|164426330|ref|XP_001728317.1| activator 1 37 kDa subunit [Neurospora crassa OR74A]
gi|157071292|gb|EDO65226.1| activator 1 37 kDa subunit [Neurospora crassa OR74A]
Length = 353
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 131 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRFAKLTDAQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 191 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 245
>gi|358367795|dbj|GAA84413.1| DNA replication factor C subunit Rfc2 [Aspergillus kawachii IFO
4308]
Length = 389
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ +
Sbjct: 150 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKALDNSA 209
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E LE IA+ E ++L + +K+ S+ ++R+AI +++ ++
Sbjct: 210 AGERLEHIAKVENLRLEDGVVDKLIACSEGDMRRAITYMQSAAKL 254
>gi|46108652|ref|XP_381384.1| hypothetical protein FG01208.1 [Gibberella zeae PH-1]
Length = 314
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 77 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQSN 136
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE+EG+ L + + S+ +LR+AI +++ ++
Sbjct: 137 AKKRLEEIAEKEGVPLEDGAVDALIKCSEGDLRKAITYLQSAARL 181
>gi|448424755|ref|ZP_21582611.1| replication factor C small subunit, partial [Halorubrum terrestre
JCM 10247]
gi|445681965|gb|ELZ34390.1| replication factor C small subunit, partial [Halorubrum terrestre
JCM 10247]
Length = 223
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L E+D L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDESDSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ ++ IA E I++ + + + ++R+AI S +A+
Sbjct: 176 VGGMVREIAAAEEIEVTDAGVDALVYAADGDMRRAINSLQAA 217
>gi|428174860|gb|EKX43753.1| hypothetical protein GUITHDRAFT_140204 [Guillardia theta CCMP2712]
Length = 331
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ + MR +E Y + C++ S++ +PI+S C +++ S +E
Sbjct: 114 IILDEADSMTSASQQAMRRTMELYSNTTRFALACNNSSEIIEPIQSRCAILRFAKLSDKE 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++ L+ I E+E + E + + ++RQA+ S +++
Sbjct: 174 LLSRLQDICEKEEVLASTDGLEALIFTADGDMRQAVNSLQST 215
>gi|255955413|ref|XP_002568459.1| Pc21g14450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590170|emb|CAP96342.1| Pc21g14450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 392
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P + +
Sbjct: 153 IILDEADAMTSTAQMALRRIMERYTANTRFCVIANYTHKLSPALLSRCTRFRFSPLKEVD 212
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+EG+++ + + SK ++R+A+ +A + P
Sbjct: 213 IRTLVDQVIEKEGVKIQPDAVDSLVTLSKGDMRRALNVLQACFASSIPL 261
>gi|449300715|gb|EMC96727.1| hypothetical protein BAUCODRAFT_34119 [Baudoinia compniacensis UAMH
10762]
Length = 350
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y G + F C+ +K ++P++S C +++ + +
Sbjct: 129 VILDEADSMTSGAQQALRRTMEIYSGTTRFAFACNQSNKIIEPLQSRCAILRYSRLTDAQ 188
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I + E ++ + +++ ++RQAI + +++ + FV G +
Sbjct: 189 VVKRLYQICKAENVEYSDDGIAALVFSAEGDMRQAINNLQSTFA-GFGFVSGDNVF 243
>gi|429856209|gb|ELA31133.1| activator 1 41 kda subunit [Colletotrichum gloeosporioides Nara
gc5]
Length = 381
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 144 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQGN 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
LE IA+ EG+QL + + S+ +LR+AI +++ ++
Sbjct: 204 AKRRLEDIAQNEGVQLEDGAVDALIKCSEGDLRKAITFLQSAARL 248
>gi|222445467|ref|ZP_03607982.1| hypothetical protein METSMIALI_01106 [Methanobrevibacter smithii
DSM 2375]
gi|261349971|ref|ZP_05975388.1| replication factor C small subunit [Methanobrevibacter smithii DSM
2374]
gi|222435032|gb|EEE42197.1| replication factor C small subunit [Methanobrevibacter smithii DSM
2375]
gi|288860754|gb|EFC93052.1| replication factor C small subunit [Methanobrevibacter smithii DSM
2374]
Length = 315
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L E D ++ DA +R +E Y C+ SK+ PI+S C + + P +E
Sbjct: 103 IFLDEVDNMTKDAQHALRREMEMYTKTASFILSCNYSSKIIDPIQSRCAIFRFGPIKGEE 162
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS----RQMNYPFVEGQVIL 115
I L++I EG + E I ++ ++R+A+ +A+ +Q++ V +V+
Sbjct: 163 IANRLKYICTSEGFEYTDGGIEAIEYFAEGDMRKAVNVLQAAASEGKQVDEDAVY-EVVS 221
Query: 116 TGWEDDITNIATKII 130
D+ N+ TK +
Sbjct: 222 KAKPQDVHNLITKAL 236
>gi|317027180|ref|XP_001400326.2| replication factor C subunit 2 [Aspergillus niger CBS 513.88]
Length = 389
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ +
Sbjct: 150 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKALDNTA 209
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E LE IA+ E ++L + +K+ S+ ++R+AI +++ ++
Sbjct: 210 AGERLEHIAKVENLRLEDGVVDKLIACSEGDMRRAITYMQSAAKL 254
>gi|255944955|ref|XP_002563245.1| Pc20g07200 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587980|emb|CAP86049.1| Pc20g07200 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ +P+ S C+ +
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSRITRFCLVCNYVTRIIEPLASRCSKFRFKMLDNSA 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E + IAEQEG+QL + + + +LR+AI +++ ++
Sbjct: 205 AGERIGNIAEQEGLQLEDGVIDTLIRCGDGDLRRAITYLQSAARL 249
>gi|448366855|ref|ZP_21554886.1| replication factor C [Natrialba aegyptia DSM 13077]
gi|445653764|gb|ELZ06624.1| replication factor C [Natrialba aegyptia DSM 13077]
Length = 1030
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 818 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 877
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I + IAE EGI++ + + + ++R+AI + +A+ M
Sbjct: 878 IEAQVREIAETEGIEVTDDGVDALVYAADGDMRKAINALQAAAVM 922
>gi|195473665|ref|XP_002089113.1| GE18941 [Drosophila yakuba]
gi|194175214|gb|EDW88825.1| GE18941 [Drosophila yakuba]
Length = 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + P S+
Sbjct: 113 IILDEADAMTNDAQNALRRIIEKYT--DNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQ 170
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ LE I E E +Q+ + +K ++R+ + +++
Sbjct: 171 NQMMPRLEKIIEAEAVQITDDGKRALLTLAKGDMRKVLNVLQST 214
>gi|449301028|gb|EMC97039.1| hypothetical protein BAUCODRAFT_147217 [Baudoinia compniacensis
UAMH 10762]
Length = 397
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +
Sbjct: 159 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDAD 218
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQVI 114
I +++ + +EG+ + + + SK ++R+A+ +A + P V GQ +
Sbjct: 219 IRHLVDKVIVEEGVNIAPDAVDSLVSLSKGDMRRALNVLQACHASSTPLHVPGQPV 274
>gi|310790808|gb|EFQ26341.1| replication factor C [Glomerella graminicola M1.001]
Length = 383
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQGN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ L IAE EG+QL + + S+ +LR+AI +++ ++
Sbjct: 205 AKKRLGDIAENEGVQLEDGAVDALIKCSEGDLRKAITYLQSAARL 249
>gi|302421348|ref|XP_003008504.1| replication factor C subunit 4 [Verticillium albo-atrum VaMs.102]
gi|261351650|gb|EEY14078.1| replication factor C subunit 4 [Verticillium albo-atrum VaMs.102]
Length = 361
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 139 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYGRLTDAQ 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
+V+ L I E E +Q + +++ ++RQAI + +++ + FV G
Sbjct: 199 VVKRLMQIIEAESVQYSDDGLAALVFSAEGDMRQAINNLQSTFS-GFGFVSG 249
>gi|425772715|gb|EKV11110.1| hypothetical protein PDIG_52530 [Penicillium digitatum PHI26]
gi|425775221|gb|EKV13502.1| hypothetical protein PDIP_47760 [Penicillium digitatum Pd1]
Length = 393
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++ERY + + KL P + S CT + P + +
Sbjct: 154 IILDEADAMTSTAQMALRRIMERYTSNTRFCVIANYTHKLSPALLSRCTRFRFSPLKEVD 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E EG+++ + + SK ++R+A+ +A + P
Sbjct: 214 IRTLVDKVIENEGVRMQPDAVDSLVTLSKGDMRRALNVLQACFASSIPL 262
>gi|341038392|gb|EGS23384.1| DNA replication factor C-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 154 IILDEADAMTNTAQMALRRIMEKYTANTRFCIIANYSHKLSPALLSRCTRFRFSPLKEQD 213
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +++ E + S+ ++R+A+ +A + P
Sbjct: 214 IRSLVDKVIEEENVKITPDAVESLVKLSRGDMRRALNVLQACHASSTPL 262
>gi|194706108|gb|ACF87138.1| unknown [Zea mays]
Length = 331
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 115 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 175 ILGRLMIVVAAEKVPYAPEGLEAIIFTADGDMRQALNNLQAT 216
>gi|448712798|ref|ZP_21701827.1| replication factor C small subunit [Halobiforma nitratireducens JCM
10879]
gi|445790224|gb|EMA40893.1| replication factor C small subunit [Halobiforma nitratireducens JCM
10879]
Length = 335
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + +
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSSNTRFILSCNYSSQIIDPIQSRCAVFRFTELTDDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI 114
I + IA +EGI+L + + + ++R+ I +A+ M E V
Sbjct: 177 IEAQVREIATEEGIELTDDGVDALVYAADGDMRKGINGLQAAAVMGETVDEDTVF 231
>gi|19921076|ref|NP_609399.1| replication factor C subunit 3 [Drosophila melanogaster]
gi|195339815|ref|XP_002036512.1| GM18361 [Drosophila sechellia]
gi|195578201|ref|XP_002078954.1| GD23698 [Drosophila simulans]
gi|7533196|gb|AAF63387.1|AF247499_1 replication factor C subunit 3 [Drosophila melanogaster]
gi|21430740|gb|AAM51048.1| SD11293p [Drosophila melanogaster]
gi|22946159|gb|AAF52944.2| replication factor C subunit 3 [Drosophila melanogaster]
gi|194130392|gb|EDW52435.1| GM18361 [Drosophila sechellia]
gi|194190963|gb|EDX04539.1| GD23698 [Drosophila simulans]
gi|220950744|gb|ACL87915.1| RfC3-PA [synthetic construct]
gi|220959368|gb|ACL92227.1| RfC3-PA [synthetic construct]
Length = 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + P S+
Sbjct: 113 IILDEADAMTNDAQNALRRIIEKYT--DNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQ 170
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ LE I E E +Q+ + +K ++R+ + +++
Sbjct: 171 DQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQST 214
>gi|448351100|ref|ZP_21539909.1| replication factor C [Natrialba taiwanensis DSM 12281]
gi|445634784|gb|ELY87958.1| replication factor C [Natrialba taiwanensis DSM 12281]
Length = 1031
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 819 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 878
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I + IAE EGI++ + + + ++R+AI + +A+ M
Sbjct: 879 IEAQVREIAETEGIEVTDDGVDALVYAADGDMRKAINALQAAAVM 923
>gi|346974683|gb|EGY18135.1| replication factor C subunit 4 [Verticillium dahliae VdLs.17]
Length = 361
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 139 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYGRLTDAQ 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEG 111
+V+ L I E E +Q + +++ ++RQAI + +++ + FV G
Sbjct: 199 VVKRLMQIIEAESVQYSDDGLAALVFSAEGDMRQAINNLQSTFS-GFGFVSG 249
>gi|226493143|ref|NP_001149058.1| LOC100282678 [Zea mays]
gi|195624372|gb|ACG34016.1| replication factor C subunit 4 [Zea mays]
Length = 331
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 115 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 175 ILGRLMIVVAAEKVPYAPEGLEAIIFTADGDMRQALNNLQAT 216
>gi|146414968|ref|XP_001483454.1| hypothetical protein PGUG_04183 [Meyerozyma guilliermondii ATCC
6260]
Length = 347
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ C+ + P +
Sbjct: 132 IILDEADSMTYDAQAALRRTMETYSGVTRFCLICNYITRIIDPLALRCSKFRFKPLANDN 191
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
V+ L +I +QE + + + + S +LR+AI +++ ++
Sbjct: 192 AVQRLRYIVQQEELNVDEDVFSYLLTISNGDLRRAITYLQSAARL 236
>gi|448450551|ref|ZP_21592370.1| replication factor C small subunit [Halorubrum litoreum JCM 13561]
gi|448522065|ref|ZP_21618330.1| replication factor C small subunit [Halorubrum distributum JCM
10118]
gi|445702339|gb|ELZ54293.1| replication factor C small subunit [Halorubrum distributum JCM
10118]
gi|445811665|gb|EMA61668.1| replication factor C small subunit [Halorubrum litoreum JCM 13561]
Length = 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L E+D L+ DA +R +E++ + C+ SK+ PI+S C V + P S +
Sbjct: 116 VFLDESDSLTDDAQSALRRTMEQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSDEA 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ ++ IA E I++ + + + ++R+AI S +A+
Sbjct: 176 VGGMVREIAAAEEIEVTDAGVDALVYAADGDMRRAINSLQAA 217
>gi|385804979|ref|YP_005841379.1| replication factor C small subunit [Haloquadratum walsbyi C23]
gi|339730471|emb|CCC41810.1| replication factor C small subunit [Haloquadratum walsbyi C23]
Length = 649
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S+
Sbjct: 438 IFLDEADSLTDDAQSALRRTMEQFADNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSETA 497
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IA E I+L + + + ++R+AI S +A+
Sbjct: 498 IRGQTKDIAAAENIELTEDGLDALVYAAGGDMRRAINSLQAA 539
>gi|242211529|ref|XP_002471602.1| predicted protein [Postia placenta Mad-698-R]
gi|220729278|gb|EED83155.1| predicted protein [Postia placenta Mad-698-R]
Length = 350
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 132 IILDEADMMTTAAQAALRRVIEQYT--KNVRFCIICNYVNKIIPAIQSRCTRFRFSPLPI 189
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
E+ L + E EG++L + + SK ++R+A+ +A
Sbjct: 190 TEVERRLSGVIEAEGVKLTEDGKKALLKLSKGDMRRALNVLQA 232
>gi|115384904|ref|XP_001208999.1| activator 1 41 kDa subunit [Aspergillus terreus NIH2624]
gi|114196691|gb|EAU38391.1| activator 1 41 kDa subunit [Aspergillus terreus NIH2624]
Length = 319
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V++ + P+ S C+ +
Sbjct: 80 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIDPLASRCSKFRFKALDNSA 139
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E LE IA+ E + L + +K+ S+ +LR+AI +++ ++
Sbjct: 140 AGERLEHIAKLENLTLESGVVDKLIQCSEGDLRRAITYMQSAARL 184
>gi|110669521|ref|YP_659332.1| replication factor C small subunit I [Haloquadratum walsbyi DSM
16790]
gi|121684598|sp|Q18E75.1|RFCS_HALWD RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
Contains: RecName: Full=Hwa RFC intein
gi|109627268|emb|CAJ53758.1| replication factor C small subunit [Haloquadratum walsbyi DSM
16790]
Length = 649
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V + P S+
Sbjct: 438 IFLDEADSLTDDAQSALRRTMEQFADNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSETA 497
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I + IA E I+L + + + ++R+AI S +A+
Sbjct: 498 IRGQTKDIAAAENIELTEDGLDALVYAAGGDMRRAINSLQAA 539
>gi|260939858|ref|XP_002614229.1| hypothetical protein CLUG_05714 [Clavispora lusitaniae ATCC 42720]
gi|238852123|gb|EEQ41587.1| hypothetical protein CLUG_05714 [Clavispora lusitaniae ATCC 42720]
Length = 339
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ +++ + P+ S C+ + +
Sbjct: 124 IILDEADSMTNDAQSALRRTMENYSGVTRFCLICNYITRIIDPLASRCSKFRFRSLDGEN 183
Query: 60 IVEVLEFIAEQEGIQLPH-QLAEKIADNSKNNLRQAIRSFE-ASRQMNYPFVEGQVI--L 115
+ L ++ EQE I L + I S +LR+AI + A+R + V I +
Sbjct: 184 ALSRLRYVVEQEHIPLASDSVLNDILAVSGGDLRKAITYLQSATRSGDAGGVSSAKIKEI 243
Query: 116 TGWEDDIT-NIATKIIEEQSPKQ 137
+G DD + I ++PKQ
Sbjct: 244 SGVVDDASMETLVGAIRAKNPKQ 266
>gi|194859928|ref|XP_001969482.1| GG10129 [Drosophila erecta]
gi|190661349|gb|EDV58541.1| GG10129 [Drosophila erecta]
Length = 332
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + P S+
Sbjct: 113 IILDEADAMTNDAQNALRRIIEKYT--DNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQ 170
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ LE I E E +Q+ + +K ++R+ + +++
Sbjct: 171 DQMMPRLEKIIEAEAVQITDDGKRALLTLAKGDMRKVLNVLQST 214
>gi|134057264|emb|CAK96427.1| unnamed protein product [Aspergillus niger]
Length = 388
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ +
Sbjct: 149 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKALDNTA 208
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E LE IA+ E ++L + +K+ S+ ++R+AI +++ ++
Sbjct: 209 AGERLEHIAKVENLRLEDGVVDKLIACSEGDMRRAITYMQSAAKL 253
>gi|15791090|ref|NP_280914.1| replication factor C small subunit [Halobacterium sp. NRC-1]
gi|169236842|ref|YP_001690042.1| replication factor C small subunit [Halobacterium salinarum R1]
gi|42559530|sp|Q9HN27.1|RFCS_HALSA RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|226739141|sp|B0R7H7.1|RFCS_HALS3 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|10581691|gb|AAG20394.1| replication factor C small subunit [Halobacterium sp. NRC-1]
gi|167727908|emb|CAP14696.1| replication factor C small subunit [Halobacterium salinarum R1]
Length = 322
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + C+ SK+ PI+S C V +
Sbjct: 110 IFLDEADALTDDAQSALRRTMEQFSNNTRFILSCNYSSKIIDPIQSRCAVFRFAQLGDDA 169
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ L IAE EG++ + + + ++R+AI + +A+
Sbjct: 170 VAAHLREIAETEGLEHTDDGIDALVYAADGDMRRAINALQAA 211
>gi|71986063|ref|NP_498750.2| Protein F44B9.8 [Caenorhabditis elegans]
gi|55584161|sp|P34429.3|RFC5_CAEEL RecName: Full=Probable replication factor C subunit 5; AltName:
Full=Activator 1 subunit 5
gi|351021183|emb|CCD63451.1| Protein F44B9.8 [Caenorhabditis elegans]
Length = 368
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD ++ DA +R ++E+Y + V FC C+ ++ + P I+S CT + P +
Sbjct: 140 VILDEADAMTKDAQNALRRVIEKYT--DNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQ 197
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IV LE+I E E +++ + + SK ++R I + +++
Sbjct: 198 KLIVPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQST 241
>gi|320580296|gb|EFW94519.1| replication factor C subunit 2 [Ogataea parapolymorpha DL-1]
Length = 334
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
+IL EAD +++DA +R +E Y G+ + C+ +++ + P+ S C+ + ++
Sbjct: 108 LILDEADSMTSDAQSALRRTMETYSGITRFCLICNYITRIIDPLASRCSKFRFKMLDEEN 167
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
++ L++I +E + + ++I S +LR+AI ++ +M P E ++ E
Sbjct: 168 SIKRLQYICNEENVTASTPVLKEILRISDGDLRKAINFLQSVHKMLMP-AEDEMADDVTE 226
Query: 120 DDITNIATKIIEEQ 133
D I ++ + ++Q
Sbjct: 227 DQIRDVFGYLPKDQ 240
>gi|448460242|ref|ZP_21597067.1| replication factor C small subunit 2 [Halorubrum lipolyticum DSM
21995]
gi|445806983|gb|EMA57069.1| replication factor C small subunit 2 [Halorubrum lipolyticum DSM
21995]
Length = 349
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAESIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRAPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I ++EG+ E +A + +LR+AI S +A+
Sbjct: 183 AIDVLETICDREGVDYDGDGLEFVASAAGGDLREAILSAQAA 224
>gi|358388819|gb|EHK26412.1| hypothetical protein TRIVIDRAFT_63722 [Trichoderma virens Gv29-8]
Length = 378
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 144 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQSN 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE EG+ L + + S+ +LR+AI +++ ++
Sbjct: 204 AKKRLESIAEAEGVTLEDGAVDALIKCSEGDLRKAITFLQSAARL 248
>gi|302925691|ref|XP_003054145.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735086|gb|EEU48432.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 314
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 77 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQSN 136
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE+EG+ L + + S+ +LR+AI +++ ++
Sbjct: 137 AKKRLEEIAEKEGVPLEDGAVDTLIKCSEGDLRKAITFLQSAARL 181
>gi|406866228|gb|EKD19268.1| activator 1 41 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 385
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ +
Sbjct: 144 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDVGN 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+E IAE+EG+ L AE + S+ +LR+AI +++ ++
Sbjct: 204 AKRRVEEIAEKEGVSLEDGAAETLIRCSEGDLRKAITFLQSAARL 248
>gi|392565350|gb|EIW58527.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 353
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 135 IILDEADMMTTAAQSALRRVIEQYT--KNVRFCIICNYVNKIIPAIQSRCTRFRFSPLPI 192
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
E+ + L + E EG++L + + SK ++R+A+ +A
Sbjct: 193 TEVEKRLNSVIEAEGVKLTEDGKKALLKLSKGDMRRALNVLQA 235
>gi|448337563|ref|ZP_21526640.1| replication factor C small subunit 2 [Natrinema pallidum DSM 3751]
gi|445625469|gb|ELY78829.1| replication factor C small subunit 2 [Natrinema pallidum DSM 3751]
Length = 334
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + L P+ +E
Sbjct: 123 ILLDNAENVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSLPAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+E + E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREVVDYDADGLEFVAGYANGNLRQAI 218
>gi|47213597|emb|CAG07263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R ++E Y + C+ K+ +PI+S C V++ + +
Sbjct: 134 IILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLTDGQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L+ + E+EG+ + E + ++ ++RQA+ + +++
Sbjct: 194 ILARLQDVVEKEGLSVSEDGLEAVIFTAQGDMRQALNNLQST 235
>gi|354545639|emb|CCE42366.1| hypothetical protein CPAR2_200090 [Candida parapsilosis]
Length = 320
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ SK+ +P++S C +++ S +E
Sbjct: 110 IILDEADSMTPGAQQALRRTMEIYSNTTRFAFACNQSSKIIEPLQSRCAILRYNKLSDEE 169
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L I + E +Q ++ + + +++ ++RQAI + +++
Sbjct: 170 VLKRLLDIIKSENVQYNNEGLQALIFSAEGDMRQAINNLQST 211
>gi|302501939|ref|XP_003012961.1| hypothetical protein ARB_00844 [Arthroderma benhamiae CBS 112371]
gi|291176522|gb|EFE32321.1| hypothetical protein ARB_00844 [Arthroderma benhamiae CBS 112371]
Length = 417
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 176 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEKD 235
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 236 IRRLVDTVIEKEEVQIQPDAIDSLVKLSKGDMRRALNVLQACHASSMPL 284
>gi|284163346|ref|YP_003401625.1| replication factor C [Haloterrigena turkmenica DSM 5511]
gi|284013001|gb|ADB58952.1| Replication factor C [Haloterrigena turkmenica DSM 5511]
Length = 334
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 VLLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVPVRAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE I E EG++ E +A + NLRQAI
Sbjct: 183 TVGVLERIVEAEGVEYDADGLEFVAGYANGNLRQAI 218
>gi|116785245|gb|ABK23650.1| unknown [Picea sitchensis]
gi|224286688|gb|ACN41047.1| unknown [Picea sitchensis]
Length = 339
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + F C+ VS+ ++P+ S C + P +
Sbjct: 118 IILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLVEDI 177
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + I ++EG+ L ++ S+ +LR+AI +++ ++
Sbjct: 178 MTGRILHICKEEGVHLDSDALTMLSSISEGDLRRAITYLQSAARL 222
>gi|408398889|gb|EKJ78015.1| hypothetical protein FPSE_01803 [Fusarium pseudograminearum CS3096]
Length = 382
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 145 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQSN 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE+EG+ L + + S+ +LR+AI +++ ++
Sbjct: 205 AKKRLEEIAEKEGVPLEDGAVDALIKCSEGDLRKAITFLQSAARL 249
>gi|407399789|gb|EKF28431.1| replication factor C, subunit 4, putative [Trypanosoma cruzi
marinkellei]
Length = 340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E + + F C++ K+ +PI+S C V++ + +
Sbjct: 125 VILDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFKKLTHAD 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L +I +QE + E + ++ +LR A+ + +A+ Y V + +
Sbjct: 185 ILKRLTYIIQQENVTYTDDGLEALLYLAEGDLRSAVNALQATHS-GYGMVNAENVF 239
>gi|340056431|emb|CCC50763.1| putative replication factor C, subunit 3 [Trypanosoma vivax Y486]
Length = 374
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD++S DA +R ++E+Y V FC C+ ++K+ P ++S CT + P K
Sbjct: 147 VILDEADQMSGDAQAALRRIIEKYT--KNVRFCIICNRINKIIPALQSRCTRFRFAPVKK 204
Query: 58 QEIVEVLEFIAEQEGIQL 75
++ L+F+ ++EG++
Sbjct: 205 GAMLPRLKFVVQEEGVRF 222
>gi|159115535|ref|XP_001707990.1| Replication factor C, subunit 5 [Giardia lamblia ATCC 50803]
gi|157436099|gb|EDO80316.1| Replication factor C, subunit 5 [Giardia lamblia ATCC 50803]
Length = 373
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L +ADKLS A +R L+E+Y K+ +S L PI S C I++ S +E
Sbjct: 125 VVLQDADKLSFTAQQALRRLMEQYAATCKLILMAESISGLIPPIVSRCFCIRVPGFSDEE 184
Query: 60 IVEVLEFIAEQEGI------QLPHQLAEKIADNSKNNLRQA---IRSFE-ASRQMNYPFV 109
IV LE + + + H L ++A ++ +LR+A +++++ AS + N V
Sbjct: 185 IVHALETTITKHRLMQGFTKESLHALLPEVATVARGDLRRAFLLLQTYQYASSKKN---V 241
Query: 110 EGQVILTGWEDDITNIATKI 129
Q ++ WE TNIA+++
Sbjct: 242 SVQSLVPEWETLCTNIASQV 261
>gi|340517381|gb|EGR47625.1| predicted protein [Trichoderma reesei QM6a]
Length = 351
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 144 IILDEADSMTQDAQSALRRTMETYSKITRFCLICNYVTRIIDPLASRCSKFRFKSLDQGN 203
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ LE IAE EG+ L + + S+ +LR+AI +++ ++
Sbjct: 204 AKKRLESIAEAEGVALEDGAVDTLIKCSEGDLRKAITYLQSAARL 248
>gi|385304250|gb|EIF48275.1| activator 1 41 kda subunit [Dekkera bruxellensis AWRI1499]
Length = 380
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y G+ + C+ V++ + P+ S C+ + +
Sbjct: 133 IILDEADSMTGDAQSALRRTMETYSGITRFCLICNYVTRIIDPLASRCSKFRFKSLDEGS 192
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+ LE+I +E I + + ++I S+ +LR+AI ++
Sbjct: 193 ALTRLEYICGKESIDVDTNILKEILRISEGDLRRAINYLQS 233
>gi|257387303|ref|YP_003177076.1| replication factor C small subunit 2 [Halomicrobium mukohataei DSM
12286]
gi|257169610|gb|ACV47369.1| Replication factor C [Halomicrobium mukohataei DSM 12286]
Length = 340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E+Y + S+L PI+S C I + P+ +E
Sbjct: 125 ILLDNAEGMREDFQQALRRVMEQYYEATQFVIATRQPSQLIPPIRSRCFPIVMRAPTHEE 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V LE +AE+EG+ E +A + +LRQA+
Sbjct: 185 TVGALERVAEREGVDYDADGLEYVAGYADGDLRQAV 220
>gi|327301329|ref|XP_003235357.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
gi|326462709|gb|EGD88162.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
Length = 397
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 156 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEKD 215
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 216 IRRLVDTVIEKEEVQIQPDAIDSLVKLSKGDMRRALNVLQACHASSMPL 264
>gi|18859927|ref|NP_573245.1| CG8142 [Drosophila melanogaster]
gi|17862532|gb|AAL39743.1| LD35209p [Drosophila melanogaster]
gi|22832754|gb|AAF48768.2| CG8142 [Drosophila melanogaster]
Length = 353
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E+ + C+ VS++ PI S C+ + + +
Sbjct: 138 IILDEADSMTHAAQSALRRTMEKESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDK 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYP 107
+++ L++I E EG+++ + I S +LR+AI + ++ ++ P
Sbjct: 198 VIDRLKYICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGP 245
>gi|71654812|ref|XP_816018.1| replication factor C, subunit 4 [Trypanosoma cruzi strain CL
Brener]
gi|70881118|gb|EAN94167.1| replication factor C, subunit 4, putative [Trypanosoma cruzi]
Length = 340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E + + F C++ K+ +PI+S C V++ + +
Sbjct: 125 VILDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFKKLTHAD 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
I++ L +I +QE + E + ++ +LR A+ + +A+ Y V + +
Sbjct: 185 ILKRLTYIIQQENVTYTDDGLEALLYLAEGDLRSAVNALQATHS-GYGMVNAENVF 239
>gi|291238303|ref|XP_002739068.1| PREDICTED: replication factor C 5-like [Saccoglossus kowalevskii]
Length = 331
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E++ + C+ +SK+ P I+S CT + P Q+
Sbjct: 112 VILDEADAMTNDAQNALRRVIEKFTENTRFCLICNYLSKIIPAIQSRCTRFRFGPLDNQQ 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
+V LE + +QE + + + + ++R+++ + S M Y V + T
Sbjct: 172 MVPRLEHVIQQERVDVTEDGMNALVTLANGDMRKSLNILQ-STSMAYDVVNEVNVYTCVG 230
Query: 117 -GWEDDITNIATKIIEE 132
++DI+NI ++ E
Sbjct: 231 HPLKEDISNIVNWMLNE 247
>gi|255513870|gb|EET90135.1| Replication factor C [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 316
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ DA +R +E++ + + SK+ +PI+S C V + P ++ +
Sbjct: 102 IFLDEADALTADAQHALRRTMEKFSAETRFILSANYASKIIEPIQSRCVVFRFKPLTEDD 161
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV 113
+ E + I + EGI L E + +LR+ +++ + EG +
Sbjct: 162 MKEYVNRIVKGEGITLEKNAMEALIYVGDGDLRKLTNVLQSAAMKSEKITEGDI 215
>gi|449018306|dbj|BAM81708.1| replication factor C subunit 3 [Cyanidioschyzon merolae strain 10D]
Length = 386
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
++L + D+L+ +A +R +E+Y ++ ++ L+P++S C I++ PS+ E
Sbjct: 165 VVLHDVDRLTREAQQALRRTMEKYAQTCRLVLIADSATRVLEPLRSRCLGIRVRAPSETE 224
Query: 60 IVEVLEFIAEQ---EGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL- 115
+ VL + ++ P L + S NLR A+ S EAS + +G +
Sbjct: 225 LRTVLRQVWQRMVHSAESPPEALLDHAIRASDGNLRSALLSLEASYWTSKAGRKGSALPE 284
Query: 116 TGWEDDITNIATKIIEEQSP 135
W IA +I +EQ+P
Sbjct: 285 PDWRSICDEIADQIRKEQTP 304
>gi|259486085|tpe|CBF83646.1| TPA: subunit of heteropentameric Replication factor C (RF-C)
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 387
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ + P
Sbjct: 149 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 208
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ L IA+ E + L + + +K+ S +LR+AI +++ ++
Sbjct: 209 AGDRLAQIAQLEKLSLENGVVDKLISCSDGDLRRAITYLQSAARL 253
>gi|358389695|gb|EHK27287.1| hypothetical protein TRIVIDRAFT_82171 [Trichoderma virens Gv29-8]
Length = 357
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + ++
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDEQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 249
>gi|350635059|gb|EHA23421.1| hypothetical protein ASPNIDRAFT_47138 [Aspergillus niger ATCC 1015]
Length = 758
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ +
Sbjct: 519 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKALDNTA 578
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
E LE IA+ E ++L + +K+ S+ ++R+AI +++ ++
Sbjct: 579 AGERLEHIAKVENLRLEDGVVDKLIACSEGDMRRAITYMQSAAKL 623
>gi|448381385|ref|ZP_21561588.1| replication factor C small subunit 2 [Haloterrigena thermotolerans
DSM 11522]
gi|445663193|gb|ELZ15947.1| replication factor C small subunit 2 [Haloterrigena thermotolerans
DSM 11522]
Length = 334
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + P+ +
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIGTRQPTKLIPPIRSRCFPVSFPAPTSEA 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E+EG+ E +A + NLRQAI
Sbjct: 183 IVTVLERIVEREGVDYDADGLEFVAGYADGNLRQAI 218
>gi|367024189|ref|XP_003661379.1| hypothetical protein MYCTH_2300696 [Myceliophthora thermophila ATCC
42464]
gi|347008647|gb|AEO56134.1| hypothetical protein MYCTH_2300696 [Myceliophthora thermophila ATCC
42464]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 134 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDAQ 193
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + ++ ++RQAI + + S + FV G +
Sbjct: 194 VVKRLLQIIEAEKVEYSDDGLAALVFTAEGDMRQAINNLQ-STHAGFGFVSGDNVF 248
>gi|403415842|emb|CCM02542.1| predicted protein [Fibroporia radiculosa]
Length = 358
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P I+S CT + P
Sbjct: 140 IILDEADMMTTAAQAALRRVIEQYT--KNVRFCIICNYVNKIIPAIQSRCTRFRFSPLPI 197
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
E+ L + E EG++L + + SK ++R+A+ +A
Sbjct: 198 PEVERRLNSVIEAEGVKLTEDGKKALLKLSKGDMRRALNVLQA 240
>gi|384248690|gb|EIE22173.1| DNA replication factor C complex subunit 2 [Coccomyxa
subellipsoidea C-169]
Length = 366
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++T A +R +E Y + C+ SK+ +PI+S C +++ S +E
Sbjct: 145 VILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRYTKLSDKE 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++E L + E + + + + ++RQA+ + +A+
Sbjct: 205 VLERLLVVCRSESVPYVDEGLGAVIFTADGDMRQALNNLQAT 246
>gi|358401379|gb|EHK50685.1| hypothetical protein TRIATDRAFT_157714 [Trichoderma atroviride IMI
206040]
Length = 357
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + ++
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDEQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 249
>gi|258569615|ref|XP_002543611.1| activator 1 40 kDa subunit [Uncinocarpus reesii 1704]
gi|237903881|gb|EEP78282.1| activator 1 40 kDa subunit [Uncinocarpus reesii 1704]
Length = 278
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSTTTRFAFACNQSNKIIEPLQSRCAILRYSRLTDTQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IVE L+ I + E ++ + +++ ++RQAI + + S + F+ G +
Sbjct: 190 IVERLDQICKAEDVKHSDDGIAALVFSAEGDMRQAINNLQ-STWAGFGFISGDNVF 244
>gi|367007401|ref|XP_003688430.1| hypothetical protein TPHA_0O00240 [Tetrapisispora phaffii CBS 4417]
gi|357526739|emb|CCE65996.1| hypothetical protein TPHA_0O00240 [Tetrapisispora phaffii CBS 4417]
Length = 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ P+ S C+ + +
Sbjct: 136 IILDEADSMTADAQSALRRTMETYSTVTRFCLICNYVTRIIDPLASRCSKFRFKALDETN 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
++ L+++A QE + EKI S +LR+AI
Sbjct: 196 ALDRLKYVATQESTKYEEGTLEKILQISAGDLRRAI 231
>gi|154151216|ref|YP_001404834.1| replication factor C small subunit [Methanoregula boonei 6A8]
gi|166225154|sp|A7I8Y0.1|RFCS_METB6 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|153999768|gb|ABS56191.1| Replication factor C [Methanoregula boonei 6A8]
Length = 322
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+ L EAD L+TDA +R +E Y + C+ SK+ PI+S C + + P Q
Sbjct: 107 LFLDEADALTTDAQAALRRTMESYAKTCRFILSCNYSSKIIDPIQSRCAIYRFRPLGPQA 166
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ E + IA +E + + + + + ++ ++R+AI + + +
Sbjct: 167 VKEEITRIAAREHLDVTPEAMDAMVYIAQGDMRKAINALQGA 208
>gi|336266754|ref|XP_003348144.1| hypothetical protein SMAC_03989 [Sordaria macrospora k-hell]
gi|380091080|emb|CCC11286.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 249
>gi|378730119|gb|EHY56578.1| replication factor C subunit 4 [Exophiala dermatitidis NIH/UT8656]
Length = 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 131 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYSRLTDAQ 190
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E +Q + +++ ++RQAI + + S + FV G +
Sbjct: 191 VVQRLLQIIEAEKVQYSEDGLAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 245
>gi|367013632|ref|XP_003681316.1| hypothetical protein TDEL_0D05210 [Torulaspora delbrueckii]
gi|359748976|emb|CCE92105.1| hypothetical protein TDEL_0D05210 [Torulaspora delbrueckii]
Length = 322
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ +K+ +P++S C +++ S ++
Sbjct: 113 IILDEADSMTAGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQ 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+++ L I + E + + E I ++ ++RQAI + +++ V G +++G
Sbjct: 173 VLKRLMEIIKAENVSFTNDGLEAIIFTAEGDMRQAINNLQST-------VAGHGLVSG 223
>gi|340054249|emb|CCC48545.1| putative replication factor C, subunit 2 [Trypanosoma vivax Y486]
Length = 347
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD L DA +R ++E Y + + C+ VS+ + PI S C + P +
Sbjct: 135 IILDEADALLPDAQAALRRMMEDYSDVTRFCILCNYVSRIIDPIASRCAKYRFKPLVRHA 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQ------MNYPFVE--G 111
+ E + +A +EG+++ + + S ++R AI + +++ N FVE G
Sbjct: 195 LRERILEVATREGLRMSDASIDALDRTSGGDMRLAIMYLQHAQKAHGDDLTNEDFVEVSG 254
Query: 112 QV-----------ILTGWEDDITNIATKIIEEQSP 135
+V +L+ DD+ + +II++ P
Sbjct: 255 KVPAGLLDNYVAALLSKKFDDVFMVTKQIIQQGYP 289
>gi|322703485|gb|EFY95093.1| putative replication factor C [Metarhizium anisopliae ARSEF 23]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ S +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLSDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + +++ + FV G +
Sbjct: 195 VVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTFA-GFGFVSGDNVF 249
>gi|384486424|gb|EIE78604.1| hypothetical protein RO3G_03308 [Rhizopus delemar RA 99-880]
Length = 253
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ A +R ++E+Y V FC C+ VSK+ P I+S CT + P
Sbjct: 37 IILDEADSMTNQAQSALRRVIEKYT--KNVRFCIVCNYVSKIIPAIQSRCTRFRFAPLEM 94
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEA 100
+++ L+ I +QE + L + + SK ++R+A+ +A
Sbjct: 95 EQVESRLQTIVDQEKVDLTEDGKKALLQLSKGDMRRALNILQA 137
>gi|358375659|dbj|GAA92238.1| activator 1 37 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +PI+S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPIQSRCAILRYARLTDAQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IV+ L+ + + E ++ + + +++ ++RQAI + +++ + FV G +
Sbjct: 190 IVKRLKQVCDAEKVEHNEEGIAALVFSAEGDMRQAINNLQSTWS-GFGFVSGDNVF 244
>gi|358059664|dbj|GAA94596.1| hypothetical protein E5Q_01248 [Mixia osmundae IAM 14324]
Length = 414
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+++ P ++S CT + P
Sbjct: 196 IILDEADMMTTTAQNALRRVIEQYT--KNVRFCIICNYVNRIIPAVQSRCTRFRFGPLET 253
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
E+ ++ + + E + L E + SK ++R+A+ +A YP V+
Sbjct: 254 TEVDRRIQHVVDAESVNLTQDGREALLKLSKGDMRRALNVLQACHSA-YPVVD 305
>gi|284163322|ref|YP_003401601.1| replication factor C [Haloterrigena turkmenica DSM 5511]
gi|284012977|gb|ADB58928.1| Replication factor C [Haloterrigena turkmenica DSM 5511]
Length = 330
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IA EGI++ + + + ++R+AI +A+ M
Sbjct: 177 IEAQVREIAANEGIEVTDDGVDALVYAADGDMRKAINGLQAAAVMG 222
>gi|91081833|ref|XP_974716.1| PREDICTED: similar to replication factor C, 37-kDa subunit,
putative [Tribolium castaneum]
gi|270006308|gb|EFA02756.1| hypothetical protein TcasGA2_TC008489 [Tribolium castaneum]
Length = 355
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E+ + C+ VS++ +P+ S CT + P ++
Sbjct: 138 VILDEADSMTHAAQAALRRTMEKESRSTRFCLICNYVSRIIEPLTSRCTKFRFKPLNEAM 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I+E L FI +E ++ + + + S ++R+AI S ++ ++
Sbjct: 198 ILERLSFICGKENVECSDKTLAALVETSGGDMRRAITSLQSCAKL 242
>gi|255931513|ref|XP_002557313.1| Pc12g04440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581932|emb|CAP80071.1| Pc12g04440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 130 VILDEADSMTAGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCAILRYARLTDAQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E +Q + +++ ++RQAI + +++ + FV G +
Sbjct: 190 VVKRLMQICEAEKVQHSEDGIAALVFSAEGDMRQAINNLQSTWS-GFGFVSGDNVF 244
>gi|145250105|ref|XP_001396566.1| replication factor C subunit 4 [Aspergillus niger CBS 513.88]
gi|134082079|emb|CAK42196.1| unnamed protein product [Aspergillus niger]
Length = 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +PI+S C +++ + +
Sbjct: 130 VILDEADSMTSGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPIQSRCAILRYARLTDAQ 189
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IV+ L+ + + E ++ + + +++ ++RQAI + +++ + FV G +
Sbjct: 190 IVKRLKQVCDAEKVEHNEEGIAALVFSAEGDMRQAINNLQSTWS-GFGFVSGDNVF 244
>gi|115459988|ref|NP_001053594.1| Os04g0569000 [Oryza sativa Japonica Group]
gi|38344372|emb|CAE02250.2| OSJNBb0032E06.6 [Oryza sativa Japonica Group]
gi|113565165|dbj|BAF15508.1| Os04g0569000 [Oryza sativa Japonica Group]
Length = 335
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 119 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 179 ILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 220
>gi|15991286|dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza sativa Indica Group]
gi|218195393|gb|EEC77820.1| hypothetical protein OsI_17026 [Oryza sativa Indica Group]
Length = 335
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 119 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 178
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 179 ILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 220
>gi|67525023|ref|XP_660573.1| hypothetical protein AN2969.2 [Aspergillus nidulans FGSC A4]
gi|40744364|gb|EAA63540.1| hypothetical protein AN2969.2 [Aspergillus nidulans FGSC A4]
Length = 754
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E+Y + + C+ V+++ +P+ S C+ + P
Sbjct: 516 IILDEADSMTQDAQSALRRTMEQYSRITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 575
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ L IA+ E + L + + +K+ S +LR+AI +++ ++
Sbjct: 576 AGDRLAQIAQLEKLSLENGVVDKLISCSDGDLRRAITYLQSAARL 620
>gi|350636056|gb|EHA24416.1| hypothetical protein ASPNIDRAFT_40316 [Aspergillus niger ATCC 1015]
Length = 342
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +PI+S C +++ + +
Sbjct: 120 VILDEADSMTSGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPIQSRCAILRYARLTDAQ 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IV+ L+ + + E ++ + + +++ ++RQAI + +++ + FV G +
Sbjct: 180 IVKRLKQVCDAEKVEHNEEGIAALVFSAEGDMRQAINNLQSTWS-GFGFVSGDNVF 234
>gi|367036204|ref|XP_003667384.1| hypothetical protein MYCTH_2313161 [Myceliophthora thermophila ATCC
42464]
gi|347014657|gb|AEO62139.1| hypothetical protein MYCTH_2313161 [Myceliophthora thermophila ATCC
42464]
Length = 389
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 155 IILDEADAMTNTAQMALRRIMEKYTANTRFCIIANYSHKLSPALLSRCTRFRFSPLKEQD 214
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +++ + + + SK ++R+A+ +A + P
Sbjct: 215 IRGLIDKVIEEENVKIMPEATDSLVRLSKGDMRRALNVLQACHASSTPL 263
>gi|67610162|ref|XP_667086.1| replication factor C3 [Cryptosporidium hominis TU502]
gi|54658182|gb|EAL36856.1| replication factor C3 [Cryptosporidium hominis]
Length = 377
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD +++ A + +R ++ERY V FC C+ V+K+ P ++S CT + P
Sbjct: 137 IILDEADMMTSTAQMALRRIMERYS--EHVRFCIICNYVNKITPALQSRCTRFRFSPLPI 194
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
++I + IA E I + + E + +S+ ++R+ + ++ NY ++
Sbjct: 195 EDIRNRISEIALSERIFVTREGQESLIKSSRGDMRKVLNVLQSCSMSNYGNIQ 247
>gi|392571020|gb|EIW64192.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 345
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E Y + C+ +K+ +PI+S C +++ QE
Sbjct: 126 VILDEADSMTAGAQQALRRTMEIYANTTRFALACNMSNKIIEPIQSRCAILRYSKLRDQE 185
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+++ L I E E ++ ++ E + ++ ++RQAI + +++ + FV G +
Sbjct: 186 VLKRLLEICEMEKVEYSNEGLEALIFTAEGDMRQAINNLQSTWS-GFGFVSGDNVF 240
>gi|302843932|ref|XP_002953507.1| DNA replication factor C complex subunit 5 [Volvox carteri f.
nagariensis]
gi|300261266|gb|EFJ45480.1| DNA replication factor C complex subunit 5 [Volvox carteri f.
nagariensis]
Length = 356
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL E D ++ DA +R ++E+Y + C+ VSK+ P ++S CT + P Q
Sbjct: 137 IILDECDAMTNDAQFALRRVIEKYTRNARFCLICNYVSKVIPALQSRCTKFRFAPLDPQF 196
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL--TG 117
+ E L+++A E + L + + + ++R+++ + S + + V+ Q + TG
Sbjct: 197 VHERLQYVASTERVNLGSGALDAVVELGNGDMRRSLNILQ-SCHLAFDVVDQQAVYLCTG 255
Query: 118 --WEDDITNIATKIIEE 132
DI+ + T ++ E
Sbjct: 256 NPLPADISQVLTWLLNE 272
>gi|448357147|ref|ZP_21545853.1| replication factor C small subunit 2 [Natrialba chahannaoensis JCM
10990]
gi|445649955|gb|ELZ02886.1| replication factor C small subunit 2 [Natrialba chahannaoensis JCM
10990]
Length = 334
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + PS E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVSFRSPSSAE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE IAE E + E +A + NLRQAI
Sbjct: 183 TVTVLEHIAEAEDVDYEPDGLEFVAGYANGNLRQAI 218
>gi|20093446|ref|NP_613293.1| replication factor C (DNA replication ATPase) intein containing
[Methanopyrus kandleri AV19]
gi|42559498|sp|Q8TZC4.1|RFCS_METKA RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
Contains: RecName: Full=Mkn RFC intein
gi|19886265|gb|AAM01223.1| Replication factor C (ATPase involved in DNA replication) intein
containing [Methanopyrus kandleri AV19]
Length = 635
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L+ D+ +R ++E Y + + S + PI+S C V + +
Sbjct: 417 IFLDEADNLTRDSQQALRRIMEMYSDACRFILAANYSSAIIDPIQSRCVVFKFTKLPESA 476
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I E L IAE EG+++ + I S+ ++R+AI +A+
Sbjct: 477 IKERLRKIAESEGVEITEDALDAIVYVSEGDMRRAINVLQAA 518
>gi|405961159|gb|EKC27004.1| Replication factor C subunit 4 [Crassostrea gigas]
Length = 343
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ A +R +E+ + C+ VS++ +PI S C + P + Q
Sbjct: 145 IILDEADSMTSPAQAALRRTMEKESKSTRFCLICNYVSRIIEPIASRCAKFRFKPLADQI 204
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+ E L+ I E E I + + + D+S+ ++R+AI
Sbjct: 205 LTERLQGICEAEKISYDKESIKALIDSSEGDMRKAI 240
>gi|332023241|gb|EGI63497.1| Replication factor C subunit 5 [Acromyrmex echinatior]
Length = 327
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + LP +
Sbjct: 112 IILDEADAMTIDAQNALRRIIEKYT--DNVRFCIICNYLSKIIPALQSRCTRFRFLPLAA 169
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++I+ L + E E +++ + + S ++R+ I +++
Sbjct: 170 EQIIPRLNHVIEAENLKVTEDGKQALITLSGGDMRKVISVLQST 213
>gi|452840856|gb|EME42793.1| hypothetical protein DOTSEDRAFT_80413 [Dothistroma septosporum
NZE10]
Length = 401
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +
Sbjct: 163 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDAD 222
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF-VEGQ 112
I ++++ + +E + + + A+ + SK ++R+A+ +A + P V GQ
Sbjct: 223 IRQLVDKVISEEVVNIAPEAADSLVTLSKGDMRRALNVLQACHASSTPLHVPGQ 276
>gi|326429717|gb|EGD75287.1| replication factor C subunit 5 [Salpingoeca sp. ATCC 50818]
Length = 330
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E+Y + C+ VSK+ P ++S CT + P + +
Sbjct: 111 IILDEADAMTNDAQAALRRVIEKYTKHTRFCLICNYVSKISPALQSRCTRFRFAPLATEH 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIR----SFEASRQMNYPFVEGQVIL 115
+++ ++ + + E I+ E + + ++R+A+ +F A ++N EG +
Sbjct: 171 MIQQVQRVIDAEHIETTPAGIEALVKLASGDMRKALNILQSTFMAFNKVND---EGVYLC 227
Query: 116 TG 117
TG
Sbjct: 228 TG 229
>gi|303271997|ref|XP_003055360.1| replication factor c, subunit 2 [Micromonas pusilla CCMP1545]
gi|226463334|gb|EEH60612.1| replication factor c, subunit 2 [Micromonas pusilla CCMP1545]
Length = 335
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD +++ A MR +E Y + C+ K+ +PI+S C +++ S QE
Sbjct: 113 VLLDEADSMTSAAQQAMRRTMEIYSNTTRFALACNASEKIIEPIQSRCAIVRFTRLSDQE 172
Query: 60 IVE-VLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR 102
++E V++ + ++E +P L E + + ++RQA+ + +A+
Sbjct: 173 VLERVMKVVEKEEVPYVPDGL-EAVVFTADGDMRQALNNLQATH 215
>gi|448312591|ref|ZP_21502333.1| replication factor C small subunit [Natronolimnobius
innermongolicus JCM 12255]
gi|445601042|gb|ELY55036.1| replication factor C small subunit [Natronolimnobius
innermongolicus JCM 12255]
Length = 330
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + +
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTDDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
I + IA+ EGI + + + + ++R+AI +A+ M
Sbjct: 177 IEAQVREIADTEGIAVTDDGVDALVYAADGDMRKAINGLQAAAVMG 222
>gi|389749254|gb|EIM90431.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 379
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V++ ++P+ S C+ + P
Sbjct: 138 IILDEADSMTQDAQAALRRIMETYAHITRFCLVCNYVTRIIEPLASRCSKFRFKPLDDSS 197
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
LE IA E +++ + + S +LR+AI +++ +++
Sbjct: 198 STNRLEHIALSEQLRVKPDVFSALISTSGGDLRRAITYLQSAARLS 243
>gi|224000545|ref|XP_002289945.1| replication factor C 37 KD subunit [Thalassiosira pseudonana
CCMP1335]
gi|220975153|gb|EED93482.1| replication factor C 37 KD subunit [Thalassiosira pseudonana
CCMP1335]
Length = 346
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V++ ++P+ S C + P +
Sbjct: 124 IILDEADTVTRDAQAALRRVIEAYSKVTRFILICNYVTRIIEPLASRCAKFRFQPLPVES 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADN----SKNNLRQAIRSFEASRQMN 105
+ +++IA +E Q E++ D S+ ++R+A+ + +++ ++
Sbjct: 184 MKARIKYIAHEEHCQFEEGKEEEVVDEILTLSQGDMRRAVTTLQSAHSLS 233
>gi|354609685|ref|ZP_09027641.1| Replication factor C [Halobacterium sp. DL1]
gi|353194505|gb|EHB60007.1| Replication factor C [Halobacterium sp. DL1]
Length = 334
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++ER+ + SKL PI S C + + P+ +E
Sbjct: 125 ILLDNAEAIREDFQQALRRVMERHHEATQFIIGTRQPSKLIPPIHSRCFPVSMRAPTPEE 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VL I E EG+ E +A + NLR+A+
Sbjct: 185 IVAVLRDIVEAEGVDHDDDGLEFVAGYADGNLRKAV 220
>gi|308479944|ref|XP_003102180.1| hypothetical protein CRE_06764 [Caenorhabditis remanei]
gi|308262335|gb|EFP06288.1| hypothetical protein CRE_06764 [Caenorhabditis remanei]
Length = 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
+IL EAD ++ DA +R ++E+Y + V FC C+ ++ + P I+S CT + P +
Sbjct: 122 VILDEADAMTKDAQNALRRVIEKYT--DNVRFCIICNYLASIIPAIQSRCTRFRFAPLDQ 179
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+ IV L+FI E I++ + + S ++R I + +++
Sbjct: 180 KLIVPRLDFIVNSENIKMTSDGRQALLTVSNGDMRTVINTLQST 223
>gi|241839414|ref|XP_002415236.1| replication factor C, subunit RFC2, putative [Ixodes scapularis]
gi|215509448|gb|EEC18901.1| replication factor C, subunit RFC2, putative [Ixodes scapularis]
Length = 252
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E++ + C+ +SK+ P ++S CT + P S +
Sbjct: 37 IILDEADAMTNDAQNALRRVIEKFTENARFCLICNYLSKIIPALQSRCTRFRFGPLSLSQ 96
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV---ILT 116
+ +E + EQE + + + + D ++ ++R+A+ +++ E V +
Sbjct: 97 MSPRIEHVIEQERLTVTEDGKKALMDLAQGDMRKALNILQSTSMAFEEVTENNVYQCVGH 156
Query: 117 GWEDDITNIATKIIEE 132
+ DI+N+ T ++ E
Sbjct: 157 PLKSDISNMVTTLLNE 172
>gi|448426612|ref|ZP_21583461.1| replication factor C small subunit 2 [Halorubrum terrestre JCM
10247]
gi|445679492|gb|ELZ31959.1| replication factor C small subunit 2 [Halorubrum terrestre JCM
10247]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I +EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICGREGVDYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|225716862|gb|ACO14277.1| Replication factor C subunit 5 [Esox lucius]
Length = 335
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E+Y + C+ +SK+ P ++S CT + P S+ +
Sbjct: 116 VILDEADAMTRDAQNALRRVIEKYTENTRFCLICNYLSKIIPALQSRCTRSRFGPLSQDQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
++ LE + +QE I + + I S ++R+++ +++ E V TG
Sbjct: 176 MIPRLEHVIQQESIDVTPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDNVYTCTGH 235
Query: 118 -WEDDITNI 125
DI NI
Sbjct: 236 PLRSDIANI 244
>gi|222629391|gb|EEE61523.1| hypothetical protein OsJ_15825 [Oryza sativa Japonica Group]
Length = 306
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 90 VILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 149
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L + E + + E I + ++RQA+ + +A+
Sbjct: 150 ILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 191
>gi|448484151|ref|ZP_21605936.1| replication factor C small subunit 2 [Halorubrum arcis JCM 13916]
gi|445820324|gb|EMA70150.1| replication factor C small subunit 2 [Halorubrum arcis JCM 13916]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I +EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICGREGVDYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|448451877|ref|ZP_21593049.1| replication factor C small subunit 2 [Halorubrum litoreum JCM
13561]
gi|448508998|ref|ZP_21615674.1| replication factor C small subunit 2 [Halorubrum distributum JCM
9100]
gi|448525162|ref|ZP_21619580.1| replication factor C small subunit 2 [Halorubrum distributum JCM
10118]
gi|445697021|gb|ELZ49098.1| replication factor C small subunit 2 [Halorubrum distributum JCM
9100]
gi|445700134|gb|ELZ52149.1| replication factor C small subunit 2 [Halorubrum distributum JCM
10118]
gi|445810093|gb|EMA60125.1| replication factor C small subunit 2 [Halorubrum litoreum JCM
13561]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + SKL PI+S C +++ P+ E
Sbjct: 123 VLLDNAEAIREDFQQALRRVMEKHHRTTQFVIATRQPSKLIAPIRSRCFPVRVRSPTTDE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I +EG+ E +A + +LR+AI S +A+
Sbjct: 183 TIDVLETICGREGVDYDGDGLEFVASAAGGDLREAILSAQAT 224
>gi|45187984|ref|NP_984207.1| ADR111Wp [Ashbya gossypii ATCC 10895]
gi|44982768|gb|AAS52031.1| ADR111Wp [Ashbya gossypii ATCC 10895]
gi|374107422|gb|AEY96330.1| FADR111Wp [Ashbya gossypii FDAG1]
Length = 321
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ S ++
Sbjct: 112 IILDEADSMTSGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQ 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L I + E +Q + E + ++ ++RQAI + +++
Sbjct: 172 VLKRLFEIIKAENVQYTNDGLEALIFTAEGDMRQAINNLQST 213
>gi|254568858|ref|XP_002491539.1| Subunit of heteropentameric Replication factor C (RF-C)
[Komagataella pastoris GS115]
gi|238031336|emb|CAY69259.1| Subunit of heteropentameric Replication factor C (RF-C)
[Komagataella pastoris GS115]
gi|328351952|emb|CCA38351.1| Replication factor C subunit 2 [Komagataella pastoris CBS 7435]
Length = 324
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ ++++ PI S C+ + P +
Sbjct: 115 IILDEADSMTFDAQSALRRIMENYSHITRFCIICNYITRIIDPITSRCSKFRFSPLNSAN 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ L+ I++ E + + +I D S +LR++I + ++ E
Sbjct: 175 SLATLKMISQSEELDIDDDSLTQILDISNGDLRKSINFLQTGHKL------------FGE 222
Query: 120 DDITNIATKI 129
D I NIA I
Sbjct: 223 DSIENIAGLI 232
>gi|76801186|ref|YP_326194.1| replication factor C small subunit 2 [Natronomonas pharaonis DSM
2160]
gi|76557051|emb|CAI48625.1| replication factor C small subunit [Natronomonas pharaonis DSM
2160]
Length = 332
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + SKL PI+S C + + PS +E
Sbjct: 123 ILLDNAEAIREDFQQALRRVMEKHYEATQFVIATRQPSKLIAPIESRCFPVPVRAPSHEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE I E EG++ E +A +LR+AI
Sbjct: 183 TVSVLESIVEAEGVEYDADGLEYVAGYGDGDLRKAI 218
>gi|307191665|gb|EFN75139.1| Replication factor C subunit 5 [Harpegnathos saltator]
Length = 329
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y + V FC C+ +SK+ P ++S CT + LP +
Sbjct: 114 IILDEADAMTIDAQNALRRIIEKYT--DNVRFCIICNYLSKIIPALQSRCTRFRFLPLAA 171
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV-EGQV--- 113
++I+ L + E E + + + + S ++R+ I + S Y V EG V
Sbjct: 172 EQIIPRLNHVIEAENLNVTEDGKQALMTLSGGDMRKVISVLQ-STWFAYGIVNEGNVYNC 230
Query: 114 ILTGWEDDITNIATKIIEE 132
+ DI NI ++ E
Sbjct: 231 VGHPLPSDIRNIVNWLLNE 249
>gi|300709798|ref|YP_003735612.1| replication factor C small subunit 2 [Halalkalicoccus jeotgali B3]
gi|448297432|ref|ZP_21487478.1| replication factor C small subunit 2 [Halalkalicoccus jeotgali B3]
gi|299123481|gb|ADJ13820.1| replication factor C small subunit 2 [Halalkalicoccus jeotgali B3]
gi|445579741|gb|ELY34134.1| replication factor C small subunit 2 [Halalkalicoccus jeotgali B3]
Length = 334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++ER+ + S L PI S C + + P+ E
Sbjct: 124 ILLDNAEAIREDFQQALRRVMERHHEAAQFVITTRQPSALIAPIVSRCFPVPVRAPTTAE 183
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE IA+ EG++ + E +A ++ +LR+AI
Sbjct: 184 IVAVLEGIAKDEGVEYDREGLEYVASYAEGDLRKAI 219
>gi|401408351|ref|XP_003883624.1| putative replication factor c [Neospora caninum Liverpool]
gi|325118041|emb|CBZ53592.1| putative replication factor c [Neospora caninum Liverpool]
Length = 403
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQEI 60
I +AD LS A +R LE Y K F + + P+KS C +++ PS +E+
Sbjct: 139 IFQDADLLSEGAQHALRRTLEIYSSRLKFVFLVERLERFSAPLKSRCFCVRVPLPSHREV 198
Query: 61 VEVLEFIAEQEGI---QLPHQLAEKIADNSKNNLRQAIRSFE--ASRQMNYPFVEGQVIL 115
V L I ++EG+ P L + I++ S NLR+A + E A+ P I
Sbjct: 199 VTYLRSICDREGLTPEMAPDALLQTISEQSGRNLRRAGLALECIATHNFTAPLSSSLSIP 258
Query: 116 TG--------WEDDITNIATKIIEEQSP 135
G WE A +Q+P
Sbjct: 259 RGEASPFPLPWERLCDEAAVCAFRQQNP 286
>gi|169767788|ref|XP_001818365.1| replication factor C subunit 2 [Aspergillus oryzae RIB40]
gi|83766220|dbj|BAE56363.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870557|gb|EIT79737.1| replication factor C, subunit RFC4 [Aspergillus oryzae 3.042]
Length = 391
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 151 IILDEADSMTQDAQSALRRTMETYSKITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 210
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTGWE 119
+ L IA+ E ++L + +K+ S +LR+AI ++ ++ G +
Sbjct: 211 AGDRLAQIAKLENLELEDGVVDKLIQCSDGDLRRAITYMQSGARLVGATGNSGRQDGGED 270
Query: 120 DDITNIATKII 130
++T+ ++++I
Sbjct: 271 AEMTDASSQVI 281
>gi|448315838|ref|ZP_21505477.1| replication factor C small subunit [Natronococcus jeotgali DSM
18795]
gi|445610597|gb|ELY64367.1| replication factor C small subunit [Natronococcus jeotgali DSM
18795]
Length = 330
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 117 IFLDEADALTSDAQSALRRTMEQFSSNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
+ + IA +EGI++ + + + ++R+AI +A+ M
Sbjct: 177 VEAQIREIATEEGIEVTDDGVDALIYAADGDMRKAINGLQAAAVMG 222
>gi|356515902|ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
Length = 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 142 VLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVH 201
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG 117
+ E L+ + + EG+ + S ++R+A+ +++ + E V L TG
Sbjct: 202 VTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTG 260
>gi|409041157|gb|EKM50643.1| hypothetical protein PHACADRAFT_152803 [Phanerochaete carnosa
HHB-10118-sp]
Length = 358
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++T A +R ++E+Y V FC C+ V+K+ P ++S CT + P
Sbjct: 141 IILDEADMMTTAAQAALRRVIEQY--TKNVRFCIICNYVNKIIPAVQSRCTRFRFSPLPV 198
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVI-LT 116
E+ + + E EG+++ + + SK ++R+A+ +A E +V T
Sbjct: 199 PEVERRINGVIETEGVKITGDGRKALLKLSKGDMRRALNVLQACHAAYDETGEREVYHCT 258
Query: 117 GWED--DITNIATKIIEEQ 133
G D DI NI + ++
Sbjct: 259 GTPDPADIANIVNSMFSDE 277
>gi|340522843|gb|EGR53076.1| replication factor C subunit 4 [Trichoderma reesei QM6a]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + ++
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLTDEQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 249
>gi|448388883|ref|ZP_21565442.1| replication factor C small subunit 2 [Haloterrigena salina JCM
13891]
gi|445669341|gb|ELZ21952.1| replication factor C small subunit 2 [Haloterrigena salina JCM
13891]
Length = 334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L A+ + D +R ++E++ + +KL PI+S C + + P+ +E
Sbjct: 123 VLLDNAEDVREDFQQALRRIMEQHHRTTQFIIATRQPTKLIPPIRSRCFPVPVRAPTSEE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
V VLE I E EG+ E +A + NLRQAI
Sbjct: 183 TVAVLERIVEAEGVAYDADGLEFVAGYANGNLRQAI 218
>gi|385806402|ref|YP_005842800.1| replication factor C small subunit [Fervidicoccus fontis Kam940]
gi|383796265|gb|AFH43348.1| replication factor C small subunit [Fervidicoccus fontis Kam940]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL E+D L++DA +R ++E + ++ + SK ++PI+S + + P K++
Sbjct: 111 IILDESDNLTSDAQQALRRMMENFTLTSRFILIANYPSKIIEPIQSRTALFRFSPLKKED 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L++I E E + E + + S+ ++R+AI +++
Sbjct: 171 VIKRLKWILENESVSYEESALEAVFEISEGDMRKAINVLQSA 212
>gi|326489719|dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 359
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
++L EAD ++ DA +R ++E+Y + C+ V+K+ P ++S CT + P
Sbjct: 140 VLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSH 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL-TG- 117
+ E L I + EG+ + + S ++R+++ +++ + E V L TG
Sbjct: 200 VSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTHMASQQITEEAVYLCTGN 259
Query: 118 -WEDDITNIATKIIEE 132
DI IA ++ E
Sbjct: 260 PMPKDIEQIAFWLLNE 275
>gi|320593090|gb|EFX05499.1| aaa ATPase domain containing protein [Grosmannia clavigera kw1407]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 136 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYARLTDAQ 195
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 196 VVKRLLQIIEAEQVRYSDDGLAALVFSAEGDMRQAINNLQ-STHAGFGFVSGDNVF 250
>gi|380470252|emb|CCF47823.1| replication factor C subunit 4 [Colletotrichum higginsianum]
Length = 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + ++
Sbjct: 139 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYARLTDEQ 198
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + +++ + FV G +
Sbjct: 199 VVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTFA-GFGFVSGDNVF 253
>gi|448302355|ref|ZP_21492337.1| Replication factor C small subunit [Natronorubrum tibetense GA33]
gi|445581584|gb|ELY35936.1| Replication factor C small subunit [Natronorubrum tibetense GA33]
Length = 1029
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + S++
Sbjct: 816 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELSEKA 875
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
I + IA EGI++ + + + ++R+AI +A+ M
Sbjct: 876 IEAQVREIAANEGIEVTDDGVDALVYAADGDMRKAINGLQAAAVM 920
>gi|225718574|gb|ACO15133.1| Replication factor C subunit 2 [Caligus clemensi]
Length = 325
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
I+L EAD ++ A +R +E Y + C+ K ++PI+S C +++ PS E
Sbjct: 112 IVLDEADSMTEAAQQALRRTMEIYSDTTRFCLACNSSEKVIEPIQSRCAMLRYSRPSDAE 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASR 102
++ + + ++EG+ + E I ++ ++RQA+ + +++
Sbjct: 172 VLAQVIKVCDKEGVSYTSEGLEAIVFTAQGDMRQALNNLQSTH 214
>gi|116205575|ref|XP_001228598.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88176799|gb|EAQ84267.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 389
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ A + +R ++E+Y + + KL P + S CT + P +Q+
Sbjct: 155 IILDEADAMTNTAQMALRRIMEKYTANTRFCIIANYSHKLSPALLSRCTRFRFSPLKEQD 214
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +++ + E + SK ++R+A+ +A + P
Sbjct: 215 IRVLVDKVIEEETVKIIPEATEALVRLSKGDMRRALNVLQACHASSTPL 263
>gi|389593215|ref|XP_003721861.1| putative replication factor C, subunit 4 [Leishmania major strain
Friedlin]
gi|321438363|emb|CBZ12115.1| putative replication factor C, subunit 4 [Leishmania major strain
Friedlin]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
++L EAD ++ A +R +E + + F C++ S++ +PI+S C V++ S +
Sbjct: 141 VLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSRIIEPIQSRCAVVRFKKLSDAD 200
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
I++ L ++ + E + E + ++ +LRQA+ + +A+ Y V
Sbjct: 201 ILKRLVYVIQHENVSYTDDGLEALLYLAEGDLRQALNALQAT-HTGYGLV 249
>gi|322701219|gb|EFY92969.1| putative replication factor C [Metarhizium acridum CQMa 102]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ S +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYAKLSDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+V+ L I E E ++ + +++ ++RQAI + +++ + FV G +
Sbjct: 195 VVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTFA-GFGFVSGDNVF 249
>gi|303322344|ref|XP_003071165.1| activator 1 subunit, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240110864|gb|EER29020.1| activator 1 subunit, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 283
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 135 VILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAILRYSRLTDAQ 194
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IV+ L I E E ++ + +++ ++RQAI + + S + FV G +
Sbjct: 195 IVKRLMQICEAEDVKHSDDGIAALVFSAEGDMRQAINNLQ-STWAGFGFVSGDNVF 249
>gi|156088043|ref|XP_001611428.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798682|gb|EDO07860.1| conserved hypothetical protein [Babesia bovis]
Length = 336
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E + +++ C+ V K + PI S C+ P S+
Sbjct: 117 IILDEADMITPDAQAALRRIIENFSNISRFILICNYVHKIIGPIYSRCSAFHFKPISQDA 176
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
+E L +I E ++ + + S+ ++R+++
Sbjct: 177 QIERLRYICTAESLEYEDHALDFLTQVSQGDMRRSV 212
>gi|448364176|ref|ZP_21552770.1| replication factor C small subunit 2 [Natrialba asiatica DSM 12278]
gi|445645064|gb|ELY98071.1| replication factor C small subunit 2 [Natrialba asiatica DSM 12278]
Length = 334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + +KL PI+S C + P+ E
Sbjct: 123 ILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSFRSPTTAE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
IV VLE I E E ++ E +A + NLRQAI
Sbjct: 183 IVTVLERIVEAEAVEYDEDGLEFVAGYADGNLRQAI 218
>gi|340059147|emb|CCC53529.1| putative replication factor C, subunit 4 [Trypanosoma vivax Y486]
Length = 339
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E + G + F C++ K+ +PI+S C V++ + +
Sbjct: 125 VILDEADSMTPAAQQALRRTIELHSGTTRFAFACNNSHKIIEPIQSRCAVVRFRKLTHGD 184
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I++ L I +QE + E + + +LR A+ + +A+
Sbjct: 185 ILKRLMHIIKQENVTYTDDGLEALLYLADGDLRSAVNALQAT 226
>gi|312372786|gb|EFR20672.1| hypothetical protein AND_19724 [Anopheles darlingi]
Length = 335
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFC--CSDVSKLQP-IKSLCTVIQLLPPSK 57
IIL EAD ++ DA +R ++E+Y V FC C+ +SK+ P I+S CT + P
Sbjct: 119 IILDEADAMTNDAQNALRRIIEKYT--ENVRFCIICNYLSKIIPAIQSRCTRFRFAPLGV 176
Query: 58 QEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++I+ LE + E EGI+ + + + ++R+ + +++
Sbjct: 177 EQILPRLEHVIEAEGIEATEDGKKALITLAGGDMRKVLNVLQST 220
>gi|332158284|ref|YP_004423563.1| putative replication factor C small subunit [Pyrococcus sp. NA2]
gi|331033747|gb|AEC51559.1| putative protein replication factor C small subunit [Pyrococcus sp.
NA2]
Length = 1267
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 34 CSDVSKL-QPIKSLCTVIQLLPPSKQEIVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLR 92
C+ SK+ +PI+S C + + P + ++I + L+FIAEQEG++L + + I ++ ++R
Sbjct: 1087 CNYSSKIIEPIQSRCAIFRFRPLNDEDIAKRLKFIAEQEGLELTEEGLQAILYIAEGDMR 1146
Query: 93 QAIRSFEASRQMNYPFVEGQVILTG 117
+AI +A+ ++ + V +
Sbjct: 1147 RAINILQAAAALDRKITDENVFMVA 1171
>gi|237833397|ref|XP_002365996.1| replication factor C, putative [Toxoplasma gondii ME49]
gi|211963660|gb|EEA98855.1| replication factor C, putative [Toxoplasma gondii ME49]
gi|221488458|gb|EEE26672.1| replication factor C, putative [Toxoplasma gondii GT1]
gi|221508964|gb|EEE34533.1| replication factor C, putative [Toxoplasma gondii VEG]
Length = 396
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 2 ILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQ-PIKSLCTVIQLLPPSKQEI 60
I +AD LS A +R LE Y K F + + P+KS C +++ PS + +
Sbjct: 139 IFQDADLLSESAQHALRRTLEIYSSRLKFVFLVERLERFSAPLKSRCFCVRVPLPSHRAV 198
Query: 61 VEVLEFIAEQEGIQ---LPHQLAEKIADNSKNNLRQA------------IRSFEASRQMN 105
L + ++EG+ P L + I++ S NLR+A S S ++
Sbjct: 199 ASFLRSLCDKEGLPPQVAPDALLQTISEKSARNLRRAGLALECLATHNFTASLSPSTALS 258
Query: 106 YPFVEGQVILTGWEDDITNIATKIIEEQSPK 136
P E WE IA +QSP+
Sbjct: 259 LPRGEASPFPLPWERLCDEIAVCAFRQQSPR 289
>gi|399576126|ref|ZP_10769883.1| hypothetical protein HSB1_19220 [Halogranum salarium B-1]
gi|399238837|gb|EJN59764.1| hypothetical protein HSB1_19220 [Halogranum salarium B-1]
Length = 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + SKL PI+S C + + P+ E
Sbjct: 143 IVLDNAEAIREDFQQALRRVMEQHHRTTQFVIATRQPSKLIPPIRSRCFPVPIRAPTTDE 202
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
++VLE I E E ++ E +A + NLR+A+ S +A+
Sbjct: 203 TIDVLEGIVEAEDVEYDSNGLEFVASAAGGNLRKAVLSAQAT 244
>gi|353241984|emb|CCA73760.1| probable RFC2-DNA replication factor C, 41 KD subunit
[Piriformospora indica DSM 11827]
Length = 358
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V++ ++P+ S C+ + P
Sbjct: 115 IILDEADSMTQDAQGALRRIMETYAKITRFCLICNYVTRIIEPLTSRCSKFRFKPLDTSS 174
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVE 110
L+ IA E +++ + + S +LR+AI ++ ++ + V+
Sbjct: 175 TSIRLKEIAAAENVEVSDDVVSALVTTSGGDLRRAITYLQSCSRLAHATVD 225
>gi|150865911|ref|XP_001385318.2| Replication factor C, subunit RFC4 [Scheffersomyces stipitis CBS
6054]
gi|149387167|gb|ABN67289.2| Replication factor C, subunit RFC4 [Scheffersomyces stipitis CBS
6054]
Length = 369
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V++ + P+ S C+ + + +
Sbjct: 135 IILDEADSMTNDAQAALRRTIENYSNITRFCLICNYVTRIIDPLASRCSKFRFRLLNNEN 194
Query: 60 IVEVLEFIAEQEGIQL-PHQLA-EKIADNSKNNLRQAIRSFEASRQMN 105
+ L++IAEQE I L +QL +++ S +LR+AI +++ +++
Sbjct: 195 ALNRLKYIAEQEHISLDSNQLVLQEVLRISGGDLRKAITFLQSATKLH 242
>gi|391342410|ref|XP_003745513.1| PREDICTED: replication factor C subunit 5-like [Metaseiulus
occidentalis]
Length = 327
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E+Y + C+ +SK + P++S CT + P S +
Sbjct: 110 IILDEADAMTHDAQNALRRVIEKYADNARFCIICNYLSKIIPPLQSRCTRFRFGPLSVSQ 169
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+V +E + + E + + + I D ++ ++R+++ +AS
Sbjct: 170 MVPRIEMVIKTEDVPITPAGKQAIVDLAEGDMRKSLNILQAS 211
>gi|254578476|ref|XP_002495224.1| ZYRO0B06248p [Zygosaccharomyces rouxii]
gi|238938114|emb|CAR26291.1| ZYRO0B06248p [Zygosaccharomyces rouxii]
Length = 321
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ +K+ +P++S C +++ S ++
Sbjct: 112 IILDEADSMTAGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQ 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILTG 117
+++ L I + E +Q + E + ++ ++RQA+ + +++ V G +++G
Sbjct: 172 VLKRLLEIIKAENVQYTNDGLEALIFTAEGDMRQAVNNLQST-------VAGHSLVSG 222
>gi|238484697|ref|XP_002373587.1| DNA replication factor C subunit Rfc2, putative [Aspergillus flavus
NRRL3357]
gi|220701637|gb|EED57975.1| DNA replication factor C subunit Rfc2, putative [Aspergillus flavus
NRRL3357]
Length = 320
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R +E Y + + C+ V+++ +P+ S C+ + P
Sbjct: 80 IILDEADSMTQDAQSALRRTMETYSKITRFCLVCNYVTRIIEPLASRCSKFRFKPLDNSA 139
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ L IA+ E ++L + +K+ S +LR+AI ++ ++
Sbjct: 140 AGDRLAQIAKLENLELEDGVVDKLIQCSDGDLRRAITYMQSGARL 184
>gi|452208185|ref|YP_007488307.1| replication factor C small subunit [Natronomonas moolapensis
8.8.11]
gi|452084285|emb|CCQ37624.1| replication factor C small subunit [Natronomonas moolapensis
8.8.11]
Length = 341
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L A+ + D +R ++E++ + SKL PI+S C I + P+ E
Sbjct: 123 ILLDNAEAIREDFQQALRRVMEKHYEATQFVIATRQPSKLIPPIESRCFPIPVRAPTHAE 182
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAI 95
VEVLE I +EG++ E +A NLR AI
Sbjct: 183 TVEVLERIVTREGVEYDADGLEYVAGYGDGNLRTAI 218
>gi|255070803|ref|XP_002507483.1| replication factor c, subunit 2 [Micromonas sp. RCC299]
gi|226522758|gb|ACO68741.1| replication factor c, subunit 2 [Micromonas sp. RCC299]
Length = 334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I+L EAD +++ A +R +E Y + C+ K+ +PI+S C +++ S QE
Sbjct: 112 ILLDEADSMTSAAQQALRRTMELYSSTTRFALACNASEKIIEPIQSRCAIVRFTRLSDQE 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
++E + + E+E + E + + ++RQA+ + +A+ + FV
Sbjct: 172 VLERIVKVVEREEVPYVPDGLEAVVFTADGDMRQALNNVQATHS-GFGFV 220
>gi|406605842|emb|CCH42728.1| Replication factor C subunit 4 [Wickerhamomyces ciferrii]
Length = 324
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ +K+ +P++S C +++ S +E
Sbjct: 111 IILDEADSMTPGAQQALRRTMEIYSNTTRFAFACNVSNKIIEPLQSRCAILRYTKLSDEE 170
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+++ L I + E ++ + E + ++ ++RQAI + + S + FV G+ +
Sbjct: 171 VLKRLLDIIKFEKVEYSNDGLEALIFTAEGDMRQAINNLQ-STVAGFGFVNGENVF 225
>gi|390594192|gb|EIN03605.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 364
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSK-LQPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E Y + + C+ V++ ++P+ S C+ + P
Sbjct: 140 IILDEADSMTQDAQAALRRIMENYARITRFCLVCNYVTRIIEPLASRCSKFRFKPLDPTS 199
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMN 105
L+ +A+ E + + + + + S+ +LR++I +++ +++
Sbjct: 200 TSSRLQHVADAERVPVTPAVLDTLVSASQGDLRRSITYLQSASRLS 245
>gi|47221499|emb|CAG08161.1| unnamed protein product [Tetraodon nigroviridis]
Length = 335
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
+IL EAD ++ DA +R ++E++ + C+ +SK+ P ++S CT + P S +
Sbjct: 116 VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQ 175
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT--- 116
+V LE + +QE I + + I S ++R+++ +++ M Y V + T
Sbjct: 176 MVPRLEHVIQQESIDVTPDGMKAIVTLSSGDMRRSLNILQST-SMAYGKVTEDTVYTCTG 234
Query: 117 -GWEDDITNI 125
DI NI
Sbjct: 235 HPLRSDIANI 244
>gi|448524726|ref|XP_003869003.1| Rfc4 heteropentameric replication factor C subunit [Candida
orthopsilosis Co 90-125]
gi|380353356|emb|CCG22866.1| Rfc4 heteropentameric replication factor C subunit [Candida
orthopsilosis]
Length = 320
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ SK+ +P++S C +++ S +E
Sbjct: 110 IILDEADSMTPGAQQALRRTMEIYSNTTRFAFACNQSSKIIEPLQSRCAILRYNKLSDEE 169
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L I + E +Q ++ + + +++ ++RQAI + +++
Sbjct: 170 VLKRLLDIIKLENVQYNNEGLQALIFSAEGDMRQAINNMQST 211
>gi|340904964|gb|EGS17332.1| DNA replication factor C-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 803
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + F C+ +K+ +P++S C +++ + +
Sbjct: 581 VILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLTDAQ 640
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
IV+ L I E E ++ + ++ ++RQAI + + S + FV G +
Sbjct: 641 IVKRLMQIIEAEKVEYSDDGLAALVFTAEGDMRQAINNLQ-STVAGFGFVSGDNVF 695
>gi|302653321|ref|XP_003018488.1| hypothetical protein TRV_07502 [Trichophyton verrucosum HKI 0517]
gi|291182138|gb|EFE37843.1| hypothetical protein TRV_07502 [Trichophyton verrucosum HKI 0517]
Length = 416
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 175 IILDEADAMTSAAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEKD 234
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E E +Q+ + + SK ++R+A+ +A + P
Sbjct: 235 IRRLVDTVIETEEVQIQPDAIDSLVKLSKGDMRRALNVLQACHASSMPL 283
>gi|224074887|ref|XP_002304476.1| predicted protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD +++ A +R +E Y + C+ SK+ +PI+S C +++ S QE
Sbjct: 114 VILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQE 173
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFV 109
I+ L + E + + E I + ++RQA+ + +A+ + FV
Sbjct: 174 ILGRLMVVVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHS-GFHFV 222
>gi|448320709|ref|ZP_21510195.1| replication factor C [Natronococcus amylolyticus DSM 10524]
gi|445605611|gb|ELY59533.1| replication factor C [Natronococcus amylolyticus DSM 10524]
Length = 1029
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
I L EAD L++DA +R +E++ + C+ S++ PI+S C V + ++
Sbjct: 816 IFLDEADALTSDAQSALRRTMEQFSNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDA 875
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQM 104
+ + IAE EGI++ + + + ++R+AI +A+ M
Sbjct: 876 VEAQIRDIAENEGIEVTDDGVDALVYAADGDMRKAINGLQAAAVM 920
>gi|50290299|ref|XP_447581.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526891|emb|CAG60518.1| unnamed protein product [Candida glabrata]
Length = 322
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++ A +R +E Y + F C+ +K+ +P++S C +++ S ++
Sbjct: 112 IILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQ 171
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVIL 115
+++ L I + E +Q + E I ++ ++RQAI + + S + V G+ +
Sbjct: 172 VLKRLLEIIKAEDVQYTNDGLEAIIFTAEGDMRQAINNLQ-STVAGHGLVNGENVF 226
>gi|71756209|ref|XP_829019.1| replication factor C subunit 4 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834405|gb|EAN79907.1| replication factor C, subunit 4, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261334959|emb|CBH17953.1| replication factor C, subunit 4, putative [Trypanosoma brucei
gambiense DAL972]
Length = 341
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
+IL EAD ++ A +R +E + + F C++ K+ +PI+S C V++ S +
Sbjct: 127 VILDEADSMTPAAQQALRRTIELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFRKLSHTD 186
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
I+ L +I +QE + E + + +LR A+ + +A+
Sbjct: 187 ILRRLMYIIQQENVAYTDDGLEALLYLADGDLRSAVNALQAT 228
>gi|219117762|ref|XP_002179670.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408723|gb|EEC48656.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 338
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++DA +R ++E+Y + C+ VSK+ P ++S CT + P S+ +
Sbjct: 120 IILDEADAMTSDAQFALRRIIEKYTKNARFCLVCNYVSKIIPALQSRCTRFRFAPLSRDQ 179
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQVILT 116
I L +AE E + + I S ++R+ + +++ E V LT
Sbjct: 180 IEGRLTEVAEAEKCKTTQDGIDAILRLSGGDMRRVLNLLQSTAMSAEVVDETSVYLT 236
>gi|342320961|gb|EGU12899.1| Replication factor C subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 438
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKL-QPIKSLCTVIQLLPPSKQE 59
IIL EAD ++T A +R +E Y + C+ +K+ +PI+S C +++ S +E
Sbjct: 211 IILDEADSMTTGAQQALRRTMELYSNTTRFALACNQSNKIIEPIQSRCAILRYARLSDKE 270
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEAS 101
+++ L+ I E E + Q + S+ ++RQAI + +++
Sbjct: 271 LLKRLKEICEIEKVPHNEQGLTALIFTSEGDMRQAINNLQST 312
>gi|336258765|ref|XP_003344190.1| hypothetical protein SMAC_08123 [Sordaria macrospora k-hell]
gi|380095124|emb|CCC07626.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 389
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD +++ A + +R ++E+Y + + KL P + S CT + P +++
Sbjct: 155 IILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYSHKLSPALLSRCTRFRFSPLKEKD 214
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPF 108
I +++ + E+E +Q+ + + SK ++R+A+ +A + P
Sbjct: 215 IRVLVDKVIEEENVQIMPDATDALVKLSKGDMRRALNVLQACHASSTPL 263
>gi|442754535|gb|JAA69427.1| Putative replication factor c subunit rfc5 [Ixodes ricinus]
Length = 328
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 1 IILCEADKLSTDALLYMRWLLERYKGLNKVFFCCSDVSKLQP-IKSLCTVIQLLPPSKQE 59
IIL EAD ++ DA +R ++E++ + C+ +SK+ P ++S CT + P S +
Sbjct: 113 IILDEADAMTNDAQNALRRVIEKFTENARFCLICNYLSKIIPALQSRCTRFRFGPLSLSQ 172
Query: 60 IVEVLEFIAEQEGIQLPHQLAEKIADNSKNNLRQAIRSFEASRQMNYPFVEGQV---ILT 116
+ +E++ EQE + + + + D ++ ++R+A+ +++ E V +
Sbjct: 173 MSPRIEYVIEQERLTVTDDGKKALMDLAQGDMRKALNILQSTSMAFEEVTENNVYQCVGL 232
Query: 117 GWEDDITNIATKIIEE 132
+ DI+N+ ++ E
Sbjct: 233 PLKSDISNMVITLLNE 248
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,900,645,259
Number of Sequences: 23463169
Number of extensions: 62403486
Number of successful extensions: 192573
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 1429
Number of HSP's that attempted gapping in prelim test: 190147
Number of HSP's gapped (non-prelim): 2162
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)