BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042723
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1
Length = 237
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/236 (93%), Positives = 223/236 (94%), Gaps = 8/236 (3%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK KRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSSVEKI EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL
Sbjct: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 113 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
LRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCN KAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQ 180
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINR 228
EQ+NKDLTLQEAETIALSILKQVMEEKVTPNNVDIA+VAPTYHLYTPSEVEAVI+R
Sbjct: 181 EQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISR 236
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/236 (91%), Positives = 222/236 (94%), Gaps = 8/236 (3%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK KR+TSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSSVEKI EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA+CDL
Sbjct: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLA 120
Query: 113 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
LRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINR 228
EQYNK+LTLQEAETIALSILKQVMEEKVTPNNVDIA+V+P YHLYTP+EVEAVI R
Sbjct: 181 EQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIAR 236
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 222/236 (94%), Gaps = 8/236 (3%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTK KRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSSVEKI EID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 113 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
LRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINR 228
EQ+NKD+TLQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI+R
Sbjct: 181 EQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISR 236
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 221/236 (93%), Gaps = 8/236 (3%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTK KRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSSVEKI EID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 113 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
LRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINR 228
EQ+NKDL+LQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI R
Sbjct: 181 EQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIAR 236
>sp|Q9Z2U1|PSA5_MOUSE Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1
Length = 241
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 190/238 (79%), Gaps = 12/238 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T +KRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSS+EKI EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +L
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 113 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 226
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>sp|P28066|PSA5_HUMAN Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3
Length = 241
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 190/238 (79%), Gaps = 12/238 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T +KRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSS+EKI EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +L
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 113 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 226
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>sp|Q5E987|PSA5_BOVIN Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1
Length = 241
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 190/238 (79%), Gaps = 12/238 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T +KRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSS+EKI EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +L
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 113 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 226
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>sp|Q9UT97|PSA5_SCHPO Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup2 PE=1 SV=1
Length = 247
Score = 315 bits (808), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/241 (63%), Positives = 191/241 (79%), Gaps = 13/241 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTK KR+TSPL+E
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
SVEK+ EID HIGCA+SGL ADART++EHARV+TQNHRF+Y EP +ESTTQ++CDL
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 113 LRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADS 169
LRFGE G+E MSRPFGV+LLIAG DE+GP LY+++PSGT+++ AKAIGSGSE A S
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 170 SLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVIN 227
L ++++KD+TL+EAE + L +L+QVMEEK+ NV +A+V +H+Y E+ +
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVA 240
Query: 228 R 228
R
Sbjct: 241 R 241
>sp|P34064|PSA5_RAT Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2
SV=1
Length = 241
Score = 312 bits (800), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/238 (65%), Positives = 187/238 (78%), Gaps = 12/238 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIE KLGSTAIG++T +KRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSS+EKI EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +L
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 113 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 226
LQE Y+K TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>sp|Q55G04|PSA5_DICDI Proteasome subunit alpha type-5 OS=Dictyostelium discoideum
GN=psmA5 PE=3 SV=1
Length = 241
Score = 307 bits (786), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 148/238 (62%), Positives = 185/238 (77%), Gaps = 11/238 (4%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLG-----STAIGLKTKKRITSPLLEPSS 55
MF TR+EYDRGVNTFSPEGRLFQVEYA+EAIKLG + L +KR+TSPLLEPSS
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGIGVQCEEGVVLAVEKRLTSPLLEPSS 60
Query: 56 VEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRF 115
++K+ EID H+ CA+SGL+ADART+++HAR+ETQNHRF+Y EPM VES Q++CDL LRF
Sbjct: 61 IQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRF 120
Query: 116 GEG---DEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
GE EE MSRPFGV+LLIAG DE GPSLYY+DPSGTF Q +AKAIG+GSEGA ++LQ
Sbjct: 121 GENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQ 180
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVIN 227
E+Y+K LT+ E + +AL+ LKQVMEE +T NV++A + + +Y E+ VI
Sbjct: 181 EKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQ 238
>sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 246
Score = 281 bits (718), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 185/241 (76%), Gaps = 13/241 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF ++TEYDRGVNTFSPEGR+FQ+EYAIEAIKLGST++G++T +KR+ S L++
Sbjct: 1 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVD 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PSSV KI EID HIG +SG++ADAR LV+HARVE QNHRF+Y EPM+VES A CDL
Sbjct: 61 PSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLS 120
Query: 113 LRFGE--GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
++FGE G ++ MSRPFGVSLLIAG DENGP L+ TDPSGT+ + +A+AIG G+E A +
Sbjct: 121 VQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTV 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVIN 227
E+Y++++T++EAE + + IL+QVMEEK+T +V+IA V + +Y +++ +I+
Sbjct: 181 FSERYHRNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIID 240
Query: 228 R 228
R
Sbjct: 241 R 241
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 278 bits (712), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 166/220 (75%), Gaps = 10/220 (4%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF T+ E D GVNTFS EGRLFQVEYA EA+KLGST IG++TK KRI+SPL+
Sbjct: 1 MFMTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLML 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
SS+EKI EID+HIG A+SGL ADARTL+++AR+E QNHRF Y EP+ VE QA+ DL
Sbjct: 61 GSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLS 120
Query: 113 LRFGEGDEES--MSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 170
LRFGEG + MSRPFGV+LLIAG DE GP L+ TDPSG F + AKA G+G+E A S
Sbjct: 121 LRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI 180
Query: 171 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 210
L E+YNK +TL+EAE +ALS LKQVMEEK+ NV++A V
Sbjct: 181 LHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220
>sp|P32379|PSA5_YEAST Proteasome subunit alpha type-5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PUP2 PE=1 SV=2
Length = 260
Score = 275 bits (702), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 167/220 (75%), Gaps = 12/220 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
MF TR+EYDRGV+TFSPEGRLFQVEY++EAIKLGSTAIG+ TK KR TSPLLE
Sbjct: 1 MFLTRSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
S+EKI EID HIGCAMSGL ADAR+++EHAR H Y E + VES TQ++CDL
Sbjct: 61 SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLA 120
Query: 113 LRFGE---GDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGAD 168
LRFGE G+E MSRPFGV+LLIAG D ++G L++ +PSGTF++ NAKAIGSGSEGA
Sbjct: 121 LRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQ 180
Query: 169 SSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 208
+ L +++ LTL+EAE + L ILKQVMEEK+ NN ++
Sbjct: 181 AELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLS 220
>sp|Q95083|PSA5_DROME Proteasome subunit alpha type-5 OS=Drosophila melanogaster
GN=Prosalpha5 PE=2 SV=2
Length = 244
Score = 273 bits (699), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 177/240 (73%), Gaps = 14/240 (5%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG--------LKTKKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG L +KRITSPL+
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMV 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
PS+VEKI E+D+HIGCA SGL+ADARTL+E ARVE QNH F Y E M++ES QA+ L
Sbjct: 61 PSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLA 120
Query: 113 LRFGE-GDEE---SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGAD 168
++FG+ GD + +MSRPFGV++L AG + P L++ DPSGTF + AKAIGSGSEGA
Sbjct: 121 IQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQ 180
Query: 169 SSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 226
+LQ+ + DLTL EA I+L+ LKQVMEEK+ NV++ + ++++T EVE I
Sbjct: 181 QNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHI 240
>sp|Q95008|PSA5_CAEEL Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5
PE=1 SV=1
Length = 248
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 167/222 (75%), Gaps = 9/222 (4%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLE 52
MF TR+EYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IG+KT +KR TS L+
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
++EKI ++D+HIG +GLIAD+RTLVE A++E QN F+Y + VE TQ++ +L
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 113 LRFGEGD-EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSL 171
L+FG+ D + SMSRPFGV++L AG D+ G L++ DPSGTF C AK+IG+ S+GA+ +L
Sbjct: 121 LQFGDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNL 180
Query: 172 QEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT 213
+EQY+ LT++E +AL+ILKQVMEEK+ NV++ + PT
Sbjct: 181 KEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVIKPT 222
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 204 bits (518), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSV 56
+T YDR + FSP+GRLFQVEYA EA+K G+TA+G+K + KR+TS L+EP S+
Sbjct: 7 QTAYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESI 66
Query: 57 EKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFG 116
EK+ +ID HIG A +GL+ADAR LVE AR+E Q +R++YGEP+ V+ +A+CDL +
Sbjct: 67 EKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVY- 125
Query: 117 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 176
+ RPFG +LLIAG D G L+ TDPSG + A AIG G + A +E+Y
Sbjct: 126 --TQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYR 183
Query: 177 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 210
+D+TLQEA +A+ L + E+ T +N++IA V
Sbjct: 184 EDMTLQEAIELAVRALYEASREETTADNLEIAVV 217
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 140/226 (61%), Gaps = 11/226 (4%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+T+IG+K KR TS L+E +S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+IDEHIG A SGL+ADAR LVE ARVE Q ++ +Y EP+ V+S ++ LCD++ +
Sbjct: 69 FKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +L+I G + L+ TDPSG + A AIGSG A ++QY D+
Sbjct: 126 QNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAV 225
L EA +AL+ + + E + T NNV+IA + +YT E V
Sbjct: 186 NLNEAINLALTAINEATEHETTANNVEIAVIKCGEEVYTKLSQEEV 231
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 148/232 (63%), Gaps = 15/232 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K +RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SGL+ADAR L++ ARVE Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+RPFG++LLI G D + L+ TDPSG + A AIGSG A L+E+Y++++
Sbjct: 127 HHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVINR 228
++ E +A+ L + EE + P N+D+A V T L T E+E ++ +
Sbjct: 187 SVSEGMELAIYALSKTTEE-LKPENIDMAIVKDTGKLVEKITVFEIEKIVKK 237
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 147/231 (63%), Gaps = 15/231 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K +RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++D+
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 227
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 11/209 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+T++G+K+K KR TS L+EP S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+IDEHIG A SGL+ADAR ++E AR+E Q +R +Y EP+ VES + +CD+ +
Sbjct: 69 FQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +L+I G + G L+ TDPSG + A AIG+G A +++Y+ D+
Sbjct: 126 QHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIA 208
L +A +AL + + E K TP +V+IA
Sbjct: 186 NLNQAIELALDAVYEATEGKTTPESVEIA 214
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 142/239 (59%), Gaps = 15/239 (6%)
Query: 1 MFFTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLE 52
M + YDR + FSP+GRLFQVEYA EA+K G+TAIG+K K KR+ S LLE
Sbjct: 1 MHLPQMGYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLE 60
Query: 53 PSSVEKIKEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV 112
++EKI +IDEHI A SGL+ADAR L++ AR+E Q +R +Y EP+TV+ + +CD
Sbjct: 61 ADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFK 120
Query: 113 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 172
++ + RPFGVSLLIAG DE P LY TDPSG + A AIG G +
Sbjct: 121 QQY---TQYGGVRPFGVSLLIAGVDEV-PKLYETDPSGALLEYKATAIGMGRNAVTEFFE 176
Query: 173 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINR 228
++Y DL+ +A + L + +E ++ P N+++ V T+ +P E++ + R
Sbjct: 177 KEYRDDLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVER 235
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 148/229 (64%), Gaps = 22/229 (9%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV+YA EA+K G+TA+G+K K KR+TS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV---LRFG 116
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYG 129
Query: 117 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 176
RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYR 182
Query: 177 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEV 222
++TL+EA +A+ L ++MEE +P ++++A ++ + TP EV
Sbjct: 183 DEMTLEEAIKLAVLALSKIMEEP-SPESIEVAVISVKEKKFKKITPEEV 230
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 187 bits (474), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 147/231 (63%), Gaps = 15/231 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K +RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 227
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 187 bits (474), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 147/231 (63%), Gaps = 15/231 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K +RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 227
T+ E +AL L + EE + P N+D+A + + L + E+E ++
Sbjct: 187 TVSEGMELALYALSKTTEE-LKPENIDMAIIKDSGKLVEKISVDEIEKIVK 236
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 145/231 (62%), Gaps = 15/231 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K +RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 227
+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 IVSEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 183 bits (465), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 13/209 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K +KRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +LL+AG +E P LY TDPSG ++ A AIGSG A + +E+Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIA 208
+L+EA +A+ L + M EK + N+++A
Sbjct: 186 SLEEAIKLAIFALAKTM-EKPSAENIEVA 213
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K KRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +++Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
TL EA +A+ L + M EK + N+++A +
Sbjct: 186 TLDEAIKLAIFALAKTM-EKPSAENIEVAVI 215
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 14/232 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K KRITS L+E S+EKI
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 66
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 67 FQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 123
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 124 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 183
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINR 228
+ A + + L + E K +++ V+ + P EVE + +
Sbjct: 184 NMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQ 235
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 134/208 (64%), Gaps = 12/208 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSPEGRL+QVEYA EA++ G+TAIG+ K +RITS L++ S+EKI
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+H+ A SGL+ADAR L++ AR+E Q +R +YGE +++E + +CD+ +
Sbjct: 69 FQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYT--- 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFGVSLLIAG D+N L+ TDPSG + A AIGSG L+++Y D+
Sbjct: 126 QHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDI 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDI 207
TL E +A++ L + E+ + P NVD+
Sbjct: 186 TLDEGLELAITALTKANED-IKPENVDV 212
>sp|Q9V2V6|PSA1_HALVD Proteasome subunit alpha 1 OS=Haloferax volcanii (strain ATCC 29605
/ DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=psmA1 PE=1 SV=2
Length = 252
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 11/212 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLEPSSVEKI 59
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T KR SPL+EP+SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ D+HIG A +G +ADAR L++ AR ++Q +R YGEP+ +E+ T+ + D + ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPIGIETLTKEVTDHIQQY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFGV+LLI G + P LY TDPSGT ++ A +IG+ L+E + DL
Sbjct: 127 QVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDL 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA 211
TL E +AL + +E P+ VD+A V+
Sbjct: 187 TLDEGIELALEAIASTSDEGTAPDGVDVATVS 218
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 14/243 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K KRITS L+E S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + +Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRPMSIRRKS 236
+ A + + L + E K + +++ V+ + P EVE + + + +++
Sbjct: 186 NMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEKHKET 245
Query: 237 SLK 239
K
Sbjct: 246 ENK 248
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 137/211 (64%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K KRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +LL+AG +E P LY TDPSG +++ A AIGSG A + +E Y+ D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDI 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
++ A +A+ L + +EE +P ++++A +
Sbjct: 186 DMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 134/212 (63%), Gaps = 19/212 (8%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K +KRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV---LRFG 116
+ID+HI A SG+IADAR LV AR+E Q +R +YGEP V + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYG 129
Query: 117 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 176
RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYR 182
Query: 177 KDLTLQEAETIALSILKQVMEEKVTPNNVDIA 208
D+ L++A +AL L + ME + +N+++A
Sbjct: 183 DDMNLEDAIKLALMALAKTMENP-SADNIEVA 213
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 19/214 (8%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K KRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV---LRFG 116
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 117 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 176
RPFG +LL+AG ++ P LY TDPSG +++ A AIGSG A + ++ Y+
Sbjct: 130 G------VRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYS 182
Query: 177 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 210
DL ++ A +A+ L + +EE +P ++++A +
Sbjct: 183 DDLDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|Q18K08|PSA_HALWD Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM
16790) GN=psmA PE=3 SV=1
Length = 250
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 137/212 (64%), Gaps = 11/212 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLEPSSVEKI 59
YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T KR SPL+EP+SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ D+H+G A +G +ADAR L++ AR + Q +R YGEP+ +E+ T+ + D + ++
Sbjct: 70 HKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFGV+LLI G ++ P LY TDPSGT ++ A +IG+ L+E Y ++L
Sbjct: 127 QVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEEL 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA 211
+L E +AL + ++++T VD+A VA
Sbjct: 187 SLDEGVGLALRTIAISNDDELTAAGVDVATVA 218
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 137/234 (58%), Gaps = 14/234 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K KRITS L+E S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRPM 230
+ A + + L + E K +++ V+ + P EVE +++ +
Sbjct: 186 NIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQIL 239
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 138/235 (58%), Gaps = 20/235 (8%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K KR+ S LLEPSS+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLV---LRFG 116
+ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE ++ LCD + +FG
Sbjct: 69 FKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFG 128
Query: 117 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 176
+RP+G +LLIAG + L+ TDPSGT + A IG G +E+YN
Sbjct: 129 G------ARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYN 182
Query: 177 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVINR 228
+ ++++A + L L E K N V+I V P + + EV + + +
Sbjct: 183 PEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQ 237
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K KRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
+A +A+ L + +EE T +++A +
Sbjct: 186 GKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K KRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
+A +A+ L + +EE T +++A +
Sbjct: 186 GKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 173 bits (439), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 134/236 (56%), Gaps = 11/236 (4%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K KRITS L+E S+EKI
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 66
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID+HIG A SGL+ADAR LV+ ARVE Q +R SY E + VE ++ +CD +
Sbjct: 67 FQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---T 123
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+G +LLIAG D+ P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 124 QYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDM 183
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRPMSIRRK 235
++ A + + L + E K +++ V+ + E E V N I K
Sbjct: 184 NIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|Q5V2X8|PSA1_HALMA Proteasome subunit alpha 1 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA1 PE=3
SV=1
Length = 260
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 141/228 (61%), Gaps = 14/228 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKT--------KKRITSPLLEPSSVEKI 59
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T KRI SPL+E SSVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ D+HIG A +G +ADAR L++ AR + Q ++ YGEP+ VE+ T+ + D + ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFGV+L+I G P L+ TDPSGT ++ A A+G+ L+E Y++ +
Sbjct: 127 QVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGM 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEA 224
L E +AL+ L V +++++P + +A V T+ T E EA
Sbjct: 187 DLDEGVDLALAALASVNDDELSPEGIGVATVDVETETFGQLTDEEKEA 234
>sp|Q5V1D4|PSA2_HALMA Proteasome subunit alpha 2 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA2 PE=3
SV=1
Length = 244
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 11/211 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKKRIT--------SPLLEPSSVEKI 59
YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T+ + SPL+E S+EKI
Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
EID H+G A +G +ADAR L++ AR ++Q +R Y EP +VES T+ + D + ++
Sbjct: 69 HEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFGV+LL+AG ++ P L+ TDPSGT ++ A AIG E + L+E+Y + +
Sbjct: 126 QTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGM 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
L+ +AL L V E+ + VDIA +
Sbjct: 186 DLEGGIELALRALASVNEDGLDATGVDIATI 216
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K KR++S LLE SS+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+IDEHIG A SGL+ DAR LV+ AR+E Q +R SY E + VE+ + LCD +
Sbjct: 69 FKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTL---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+G +LLIAG + L+ TDPSGT + A IG G A +E+Y DL
Sbjct: 126 QYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADL 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
L++A + L L E K + V++ V
Sbjct: 186 ALKDAILLGLKALHSATEGKFDVDTVEMGIV 216
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 11/212 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K KR+TS LLEP S+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKI 68
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY EP+ VE + LCD + +
Sbjct: 69 FKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTY---T 125
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RP+G +LLIAG + L+ TDPSGT + A IG+G + +++Y +D
Sbjct: 126 QFGGARPYGTALLIAGVSDGEARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDA 185
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARVA 211
A + + L E K+ + ++I V+
Sbjct: 186 DFSGAIRLGIKALHAATEGKLDVSAIEIGVVS 217
>sp|Q3IPJ1|PSA_NATPD Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160
/ ATCC 35678) GN=psmA PE=3 SV=1
Length = 255
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 135/211 (63%), Gaps = 11/211 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T+ KRI SPL+E +SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKI 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ D+HIG A +G +ADAR L++ AR + Q ++ Y EP+ VE+ T+A+ D + ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ +RPFGV+L+I G ++ P LY TDPSGT ++ A A+G+ L+E Y++ L
Sbjct: 127 QVGGARPFGVALIIGGIEDGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESL 186
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIARV 210
+ +AL L V ++ +TP + +A V
Sbjct: 187 DTEAGIGLALEALASVNDDSLTPEGIGLATV 217
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 138/226 (61%), Gaps = 13/226 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLK--------TKKRITSPLLEPSSVEKI 59
YDR + FSP+GRLFQVEYA EA+K GSTA+GLK + K+I S L+E +S+EKI
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKI 67
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
+ ID+++ SGL+ADAR L++ AR+ Q + +YG + +E+ + + D + ++
Sbjct: 68 QLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---T 124
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RP+GVSL+ AG D+ GP L+ DP+GT + A AIGSG + S L+++Y + L
Sbjct: 125 QYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGL 184
Query: 180 TLQEAETIALSILKQVMEEKVTPNNVDIAR--VAPTYHLYTPSEVE 223
+ +EA T+ + LK +EE +IA V Y +Y EV+
Sbjct: 185 SEKEAVTLGIKALKASLEEGEELKAPEIASITVGSKYRIYGAEEVK 230
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K KR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 180 TLQEAETIALSILKQVME--EKVTPNNVDIA 208
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEIG 217
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K KR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 180 TLQEAETIALSILKQVME--EKVTPNNVDIA 208
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEIG 217
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K KR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 180 TLQEAETIALSILKQVME--EKVTPNNVDIA 208
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEIG 217
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 13/211 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK--------KRITSPLLEPSSVEKI 59
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K KR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 60 KEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLVLRFGEGD 119
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 120 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 179
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 180 TLQEAETIALSILKQVME--EKVTPNNVDIA 208
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEIG 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,493,074
Number of Sequences: 539616
Number of extensions: 3792943
Number of successful extensions: 11141
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 10281
Number of HSP's gapped (non-prelim): 439
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)