BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042724
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 43 LYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD-FIEIQNSYATLSDPTARAVYDM 101
LY++L + T T+ EIK AY+ LAK YH D++ G D F++I N+YA LSD T +A YD
Sbjct: 3 LYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYDA 62
Query: 102 CL 103
L
Sbjct: 63 ML 64
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 42 DLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG-RDFIEIQNSYATLSDPTARAVYD 100
+LY++L + T +I EIK+AY+ LAK YH D++ G + F+EI N+Y+ LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 101 MCL 103
L
Sbjct: 62 SML 64
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2
SV=1
Length = 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 39 DGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTA 95
D RD YE+L V + T EIK AY+ LAK YH D++ G F E+Q +Y LSD
Sbjct: 3 DKRDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQK 62
Query: 96 RAVYD 100
RA YD
Sbjct: 63 RANYD 67
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 32 DACDGAEDGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGR------DFIEIQN 85
D +ED Y++L V + T+ EIK AY+ LA+ YH D+S R FI +Q
Sbjct: 57 DPVKQSEDL-SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQE 115
Query: 86 SYATLSDPTARAVYDMCL 103
+Y TLSDP R +YD L
Sbjct: 116 AYETLSDPRRRVLYDRDL 133
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
RD YEVL + T EIK AY+ LA YH D + +D F EI+ +Y LSDP R
Sbjct: 4 RDFYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKR 63
Query: 97 AVYDM 101
A YD
Sbjct: 64 AAYDQ 68
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=dnaJ PE=3
SV=1
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
+DLYE+L V+ + EIK AY+ LAK YH DL+ ++ F EI +Y LSDP R
Sbjct: 4 KDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKR 63
Query: 97 AVYD 100
A YD
Sbjct: 64 AQYD 67
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARA 97
RD YE+L V + E+K AY+ LA+ YH D++ G F EI +Y LSDP ARA
Sbjct: 3 RDFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARA 62
Query: 98 VYD 100
YD
Sbjct: 63 NYD 65
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL + + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL + + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL + + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL + + + EIK AY+ L+K YH D+ +G F EI +Y LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|Q67S53|DNAJ_SYMTH Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=dnaJ PE=3 SV=1
Length = 386
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
RD YE+L V T EIK A+++LA+ YH D + + D F EI +Y LSDP R
Sbjct: 7 RDYYEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSDPEKR 66
Query: 97 AVYD 100
A YD
Sbjct: 67 ARYD 70
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGR----DFIEIQNSYATLSDPTAR 96
RD YE+L V+ + EIK AY+ LAK YH D++ + F EI +Y LSDP R
Sbjct: 5 RDYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKR 64
Query: 97 AVYD 100
A YD
Sbjct: 65 ARYD 68
>sp|Q74H58|DNAJ_GEOSL Chaperone protein DnaJ OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=dnaJ PE=3 SV=1
Length = 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 37 AEDGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSD 92
A D RD YEVL V + EIK A++ LA YH D + + ++ F EI +Y LSD
Sbjct: 2 AADKRDYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSD 61
Query: 93 PTARAVYD 100
P RA YD
Sbjct: 62 PQKRAQYD 69
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN----GRDFIEIQNSYATLSDPTAR 96
RD YE+L V T EIK AY+ LA+ YH D++ + F EI +Y LSDP R
Sbjct: 3 RDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKR 62
Query: 97 AVYD 100
A YD
Sbjct: 63 ARYD 66
>sp|A1JJD6|DNAJ_YERE8 Chaperone protein DnaJ OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=dnaJ PE=3 SV=1
Length = 376
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN----GRDFIEIQNSYATLSDPTAR 96
RD YEVL V+ EIK AY+ LA YH D + + G +F E++ +Y L+DP R
Sbjct: 4 RDYYEVLGVKKDADEREIKKAYKRLAVKYHPDRNQDENDTGENFKEVKEAYEILTDPQKR 63
Query: 97 AVYDM 101
A YD
Sbjct: 64 AAYDQ 68
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ +G+ F E++ +Y TLSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 HYD 66
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN---GRDFIEIQNSYATLSDPTARA 97
RD YEVL V+ ++ E+K AY+ LA+ YH D++ F E++ +Y TLSDP +A
Sbjct: 4 RDYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKA 63
Query: 98 VYD 100
YD
Sbjct: 64 RYD 66
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ +G+ F E++ +Y TLSD R+
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRS 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain FZB42)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ SG F E++ +Y LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D+ +G F E++ +Y TLSD RA
Sbjct: 4 RDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 HYD 66
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psi1 PE=2 SV=2
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 43 LYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG-RDFIEIQNSYATLSDPTARAVYD 100
LY+ L V P + E+K AY+ LA YH D + NG + F EI +Y LSDP R +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>sp|Q93R26|DNAJ_TETHA Chaperone protein DnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3
SV=1
Length = 386
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG---RDFIEIQNSYATLSDPTARA 97
RD YEVL V+ + EIK AY+ L+K YH D++ F + Q TLSDP RA
Sbjct: 5 RDYYEVLGVDKGASDDEIKKAYRKLSKKYHPDVNQEADAEEKFKKFQKPMNTLSDPQKRA 64
Query: 98 VYDM 101
YD
Sbjct: 65 AYDQ 68
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 43 LYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGR-------DFIEIQNSYATLSDPTA 95
LY+VL V T +IK AY+ LA++ H D++G R +F++I +Y TLSDP
Sbjct: 66 LYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEK 125
Query: 96 RAVYD 100
R+VYD
Sbjct: 126 RSVYD 130
>sp|Q87VN8|CBPA_PSESM Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=cbpA PE=3 SV=1
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 39 DGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTA 95
D +D Y++L VEP IK AY+ LA+ YH D+S G F E +Y LS P
Sbjct: 2 DFKDYYKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEK 61
Query: 96 RAVYD 100
RA YD
Sbjct: 62 RAEYD 66
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG---RDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ LAK YH D+S F E+Q +Y LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|Q6F150|DNAJ_MESFL Chaperone protein DnaJ OS=Mesoplasma florum (strain ATCC 33453 /
NBRC 100688 / NCTC 11704 / L1) GN=dnaJ PE=3 SV=1
Length = 374
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V T+T EIK AY+ LAK YH D+ SG F E+ + + L D +A
Sbjct: 4 RDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKA 63
Query: 98 VYD 100
YD
Sbjct: 64 KYD 66
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC 3956
/ LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 42 DLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARAV 98
DLY+VL V+ + EIK AY+ LA YH D++ G + F +I +Y TLSD RA
Sbjct: 5 DLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQ 64
Query: 99 YDM 101
YD
Sbjct: 65 YDQ 67
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDL---SGNGRDFIEIQNSYATLSDPTARA 97
RD YEVL + + + EIK AY+ L+K YH D+ +G F EI +Y LSD RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 QYD 66
>sp|P47442|DNAJM_MYCGE DnaJ-like protein MG200 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG200 PE=1 SV=1
Length = 601
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 37 AEDGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSD 92
AE RD YEVL + P EIK A++ LAK YH D N D F EI + LS+
Sbjct: 2 AEQKRDYYEVLGITPDADQSEIKKAFRKLAKKYHPD-RNNAPDAAKIFAEINEANDVLSN 60
Query: 93 PTARAVYD 100
P RA YD
Sbjct: 61 PKKRANYD 68
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARA 97
+DLY+VL VE + EIK AY+ L+K YH DL+ G F + +Y TL D RA
Sbjct: 4 QDLYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRA 63
Query: 98 VYDM 101
YD
Sbjct: 64 QYDQ 67
>sp|Q0K758|DNAJ_CUPNH Chaperone protein DnaJ OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1
Length = 381
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD-------FIEIQNSYATLSDP 93
RD YEVL V + EIK AY+ LA YH D + G+D F E++ +Y LSDP
Sbjct: 4 RDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDP 63
Query: 94 TARAVYD 100
+A YD
Sbjct: 64 EKKAAYD 70
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN---GRDFIEIQNSYATLSDPTARA 97
+D YE+L V T EIK AY+ L + YH DL+ + F EI +Y LSDP RA
Sbjct: 5 KDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRA 64
Query: 98 VYD 100
YD
Sbjct: 65 QYD 67
>sp|O27352|DNAJ_METTH Chaperone protein DnaJ OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=dnaJ PE=3 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN---GRDFIEIQNSYATLSDPTARA 97
RD YE+L V+ EIK AY+ LA+ YH D+S + F EI +YA LSD RA
Sbjct: 4 RDYYEILGVDRGADKKEIKKAYRRLARKYHPDVSDDPDAAEKFKEISEAYAVLSDDEKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 RYD 66
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC
BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
+D YE+L V T EIK AY+ LAK YH D + ++ F EI +Y LSDP R
Sbjct: 5 KDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKR 64
Query: 97 AVYD 100
+YD
Sbjct: 65 KLYD 68
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D++ G F EI +Y LSD RA
Sbjct: 4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 NYD 66
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG---RDFIEIQNSYATLSDPTARA 97
RDLYEVL V EIK AY+ LA+ YH D++ F E++++Y LS+P RA
Sbjct: 3 RDLYEVLGVAKDADADEIKKAYRKLARQYHPDVNKEADAEEKFKEVKDAYDILSEPQKRA 62
Query: 98 VYD 100
YD
Sbjct: 63 QYD 65
>sp|B7IFE0|DNAJ_THEAB Chaperone protein DnaJ OS=Thermosipho africanus (strain TCF52B)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD-----FIEIQNSYATLSDPTA 95
+D YE+L V + EI+ AY+ L K +H D + R F EIQ +Y LSDP
Sbjct: 4 KDYYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRKEAEEKFKEIQEAYEVLSDPEK 63
Query: 96 RAVYD 100
RA+YD
Sbjct: 64 RAMYD 68
>sp|A6UEY1|DNAJ_SINMW Chaperone protein DnaJ OS=Sinorhizobium medicae (strain WSM419)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS-GNG---RDFIEIQNSYATLSDPTAR 96
RDLYE L V+ + E+K A++ LA YH D + G+ + F EI +Y TL DP R
Sbjct: 3 RDLYETLGVQKSADEKELKSAFRKLAMKYHPDRNPGDNEAEKSFKEINEAYETLKDPQKR 62
Query: 97 AVYD 100
A YD
Sbjct: 63 AAYD 66
>sp|Q5NSW9|DNAJ_BURM1 Chaperone protein DnaJ OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=dnaJ PE=3 SV=1
Length = 376
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
RD YEVL V + EIK AY+ LA YH D + + +D F E++ +Y LSD R
Sbjct: 4 RDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDSQKR 63
Query: 97 AVYD 100
A YD
Sbjct: 64 AAYD 67
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARA 97
RD YE+L V T E+K AY+ LA+ YH D++ G F EI +Y LS+P RA
Sbjct: 3 RDYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRA 62
Query: 98 VYD 100
YD
Sbjct: 63 RYD 65
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain Massachusetts
/ E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
+D YEVL VE EIK A++ LA YH D + ++ F EI +Y LSDP R
Sbjct: 4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKR 63
Query: 97 AVYD 100
A YD
Sbjct: 64 AQYD 67
>sp|Q56237|DNAJ2_THET8 Chaperone protein DnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ2 PE=3 SV=2
Length = 280
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNG---RDFIEIQNSYATLSDPTARA 97
+D Y +L V T EIK AY+ LA+ YH D++ + F EI +YA LSDP R
Sbjct: 5 KDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRR 64
Query: 98 VYD 100
+YD
Sbjct: 65 IYD 67
>sp|O34136|DNAJ_DEIPM Chaperone protein DnaJ OS=Deinococcus proteolyticus (strain ATCC
35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154
/ VKM Ac-1939 / CCM 2703) GN=dnaJ PE=3 SV=2
Length = 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGN----GRDFIEIQNSYATLSDPTAR 96
+D YEVL V + + +IK AY+ LAK YH D + F EI +YA LSDP R
Sbjct: 4 KDYYEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAEKFKEIGEAYAVLSDPQKR 63
Query: 97 AVYD 100
YD
Sbjct: 64 QAYD 67
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 38 EDGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD-----FIEIQNSYATLSD 92
++ +D YE+L V T EIK AY+ L K +H D R F EIQ +Y LSD
Sbjct: 3 KEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
Query: 93 PTARAVYD 100
P RA+YD
Sbjct: 63 PQKRAMYD 70
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLS---GNGRDFIEIQNSYATLSDPTARA 97
RD YEVL V + + EIK AY+ L+K YH D++ G F EI +Y LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 98 VYD 100
YD
Sbjct: 64 NYD 66
>sp|Q92T07|DNAJ_RHIME Chaperone protein DnaJ OS=Rhizobium meliloti (strain 1021) GN=dnaJ
PE=3 SV=1
Length = 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 RDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD----FIEIQNSYATLSDPTAR 96
RDLYE L V+ E+K A++ LA YH D + ++ F EI +Y TL DP R
Sbjct: 3 RDLYETLGVQKNADEKELKSAFRKLAMKYHPDRNPGDQESEKSFKEINEAYETLKDPQKR 62
Query: 97 AVYD 100
A YD
Sbjct: 63 AAYD 66
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 38 EDGRDLYEVLRVEPTTTILEIKMAYQSLAKVYHLDLSGNGRD-----FIEIQNSYATLSD 92
++ +D YE+L V T EIK AY+ L K +H D R F EIQ +Y LSD
Sbjct: 3 KEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
Query: 93 PTARAVYD 100
P RA+YD
Sbjct: 63 PQKRAMYD 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,286,623
Number of Sequences: 539616
Number of extensions: 1425885
Number of successful extensions: 4448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 3059
Number of HSP's gapped (non-prelim): 933
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)