Query 042725
Match_columns 441
No_of_seqs 221 out of 1484
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:22:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0b_A Renin; hydrolase-hormon 100.0 5.6E-60 1.9E-64 467.7 23.9 340 36-436 11-383 (383)
2 3psg_A Pepsinogen; hydrolase(a 100.0 5.2E-60 1.8E-64 467.0 22.3 337 36-436 4-370 (370)
3 3vla_A EDGP; extracellular, in 100.0 2.3E-57 7.9E-62 453.7 24.8 337 81-436 19-399 (413)
4 1tzs_A Cathepsin E; hydrolase, 100.0 5.6E-56 1.9E-60 436.1 26.6 304 75-439 16-345 (351)
5 3cms_A Chymosin B; hydrolase, 100.0 7.6E-56 2.6E-60 430.4 24.3 294 76-436 8-323 (323)
6 1qdm_A Prophytepsin; aspartic 100.0 1.7E-55 5.7E-60 447.1 25.1 311 74-436 44-478 (478)
7 4aa9_A Chymosin; hydrolase, as 100.0 3.1E-55 1E-59 425.9 24.2 294 76-436 5-320 (320)
8 1dpj_A Proteinase A; proteinas 100.0 2.2E-54 7.5E-59 421.3 29.3 296 79-436 10-329 (329)
9 3aup_A SBG7S, BG, basic 7S glo 100.0 9.6E-55 3.3E-59 435.0 25.8 328 80-440 19-397 (403)
10 1htr_B Gastricsin; aspartyl pr 100.0 8.7E-55 3E-59 424.1 24.6 296 79-436 9-329 (329)
11 1am5_A Pepsin, acid proteinase 100.0 6.8E-55 2.3E-59 424.0 23.0 289 79-436 9-324 (324)
12 3c9x_A Trichoderma reesei aspa 100.0 1.6E-54 5.4E-59 422.1 23.8 292 80-435 13-329 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 1.2E-54 4E-59 428.6 22.5 300 77-439 13-358 (361)
14 2apr_A Rhizopuspepsin; hydrola 100.0 2.7E-54 9.3E-59 419.7 24.7 291 80-436 13-324 (325)
15 1j71_A Candidapepsin, aspartic 100.0 6E-55 2.1E-59 426.0 19.9 290 81-439 11-327 (334)
16 1miq_A Plasmepsin; aspartic pr 100.0 4.7E-54 1.6E-58 425.2 26.1 295 74-436 54-374 (375)
17 1oew_A Endothiapepsin; hydrola 100.0 2.6E-54 9E-59 420.5 22.5 290 81-435 14-329 (329)
18 3k1w_A Renin; protease, altern 100.0 3.8E-54 1.3E-58 421.9 22.5 302 75-436 11-340 (341)
19 3fv3_A SAPP1P-secreted asparti 100.0 5.3E-54 1.8E-58 420.5 22.8 295 81-440 11-333 (339)
20 3qvc_A Histo-aspartic protease 100.0 1.5E-53 5.3E-58 428.9 25.1 296 73-436 128-449 (451)
21 1yg9_A Aspartic protease BLA G 100.0 1.8E-53 6.2E-58 414.6 24.4 295 74-436 9-329 (330)
22 2qzx_A Candidapepsin-5; aspart 100.0 5.1E-54 1.7E-58 420.9 20.5 293 81-439 11-334 (342)
23 3lpj_A Beta-secretase 1; alzhe 100.0 5.3E-53 1.8E-57 428.7 28.4 316 80-439 72-423 (455)
24 2bju_A Plasmepsin II; aspartic 100.0 1.5E-53 5E-58 428.5 23.2 294 74-436 130-450 (453)
25 1izd_A Aspartic proteinase; su 100.0 9.4E-53 3.2E-57 408.4 24.9 288 80-436 13-323 (323)
26 3pvk_A Candidapepsin-2; hydrol 100.0 1.1E-53 3.6E-58 418.9 18.3 294 81-439 11-334 (342)
27 3vf3_A Beta-secretase 1; struc 100.0 8.9E-52 3.1E-56 413.8 30.0 315 81-439 27-377 (402)
28 2qp8_A Beta-secretase 1; BACE1 100.0 6.7E-52 2.3E-56 413.6 27.2 315 79-439 18-370 (395)
29 2ewy_A Beta-secretase 2; BACE2 100.0 3E-52 1E-56 414.7 24.2 314 80-439 11-358 (383)
30 1ibq_A Aspergillopepsin; aspar 100.0 3.9E-52 1.3E-56 404.5 23.6 288 81-436 13-325 (325)
31 1bxo_A Protein (penicillopepsi 100.0 3.5E-52 1.2E-56 404.5 21.2 286 81-436 14-323 (323)
32 1t6e_X Xylanase inhibitor; two 100.0 1.4E-51 4.9E-56 409.0 22.2 317 80-437 12-374 (381)
33 1wkr_A Polyporopepsin; hydrola 100.0 8.8E-51 3E-55 397.7 22.7 292 81-439 11-336 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.8E-39 6.2E-44 301.3 16.1 212 76-332 7-236 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.4E-34 4.9E-39 269.0 19.9 215 188-436 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.3E-23 4.4E-28 165.4 7.5 84 78-186 9-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 1.8E-19 6.2E-24 139.2 8.5 83 347-436 1-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 95.2 0.13 4.3E-06 42.8 9.7 28 408-435 108-135 (148)
39 2i1a_A DNA damage-inducible pr 94.1 0.18 6E-06 41.7 8.1 27 408-434 109-135 (148)
40 2i1a_A DNA damage-inducible pr 93.7 0.041 1.4E-06 45.7 3.4 28 82-111 25-52 (148)
41 2hs1_A HIV-1 protease; ultra-h 83.7 1.1 3.6E-05 34.2 3.9 24 86-111 11-34 (99)
42 1fmb_A EIAV protease; hydrolas 83.5 0.99 3.4E-05 34.8 3.7 24 86-111 11-34 (104)
43 3ec0_A Protease; HIV-2, inhibi 79.8 1.7 5.8E-05 33.1 3.7 24 86-111 11-34 (99)
44 3liy_A Protease; hydrolase, hy 76.8 2.1 7.2E-05 33.3 3.5 28 86-113 13-43 (116)
45 2hah_A Protease, retropepsin; 72.0 3.1 0.00011 32.6 3.5 23 86-111 17-39 (116)
46 3s8i_A Protein DDI1 homolog 1; 70.1 3.4 0.00012 34.0 3.5 26 84-111 25-50 (148)
47 3sqf_A Protease; folded monome 69.7 4.2 0.00014 31.7 3.7 24 86-111 12-35 (114)
48 3slz_A GAG-Pro-POL polyprotein 60.1 7.9 0.00027 31.1 3.7 24 86-111 25-48 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 54.5 10 0.00035 32.8 3.7 24 86-111 11-34 (203)
50 1lya_A Cathepsin D; lysosomal 51.7 12 0.00042 28.0 3.4 15 309-323 30-44 (97)
51 2rsp_A RSV protease; hydrolase 51.1 12 0.00041 29.6 3.4 22 89-112 26-47 (124)
52 1fmb_A EIAV protease; hydrolas 46.2 13 0.00044 28.4 2.8 34 277-325 5-38 (104)
53 2hs1_A HIV-1 protease; ultra-h 44.7 12 0.0004 28.4 2.3 30 277-321 5-34 (99)
54 3ec0_A Protease; HIV-2, inhibi 43.8 13 0.00043 28.2 2.3 29 277-320 5-33 (99)
55 2hah_A Protease, retropepsin; 43.0 15 0.00052 28.6 2.7 30 277-322 11-40 (116)
56 3slz_A GAG-Pro-POL polyprotein 36.6 26 0.0009 28.0 3.3 27 281-322 23-49 (132)
57 3ka2_A [L-Ala51;Gly51']HIV-1 p 32.6 36 0.0012 29.3 3.7 24 86-111 115-138 (203)
58 1lya_B Cathepsin D; lysosomal 25.9 54 0.0018 28.6 3.9 27 86-112 106-136 (241)
59 1bxo_A Protein (penicillopepsi 25.0 50 0.0017 30.5 3.6 30 277-324 16-45 (323)
60 3c9x_A Trichoderma reesei aspa 25.0 68 0.0023 29.6 4.6 16 309-324 32-47 (329)
61 1oew_A Endothiapepsin; hydrola 23.8 74 0.0025 29.3 4.6 15 309-323 32-46 (329)
62 1izd_A Aspartic proteinase; su 23.7 54 0.0019 30.2 3.6 30 277-324 16-45 (323)
63 2apr_A Rhizopuspepsin; hydrola 22.8 70 0.0024 29.5 4.2 29 277-323 16-46 (325)
64 1yg9_A Aspartic protease BLA G 22.6 55 0.0019 30.3 3.4 29 277-323 18-46 (330)
65 1ibq_A Aspergillopepsin; aspar 21.8 54 0.0019 30.2 3.2 31 276-324 14-44 (325)
66 2rsp_A RSV protease; hydrolase 21.5 35 0.0012 26.9 1.4 14 309-322 34-47 (124)
67 3liy_A Protease; hydrolase, hy 21.3 46 0.0016 25.8 2.0 28 280-322 10-42 (116)
68 3sqf_A Protease; folded monome 21.1 82 0.0028 24.3 3.5 27 280-321 9-35 (114)
69 1b5f_A Protein (cardosin A); h 20.9 66 0.0023 28.1 3.4 15 309-323 30-44 (239)
No 1
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=5.6e-60 Score=467.71 Aligned_cols=340 Identities=20% Similarity=0.268 Sum_probs=247.7
Q ss_pred EeecccccccCCCCCCcC-Ccccccccc----ccccCCCCCcccccccceeEEEEEEEeeCCCCceEEEEEECCCCceeE
Q 042725 36 FALISRRFSHDDLSPSYY-SSFVSQTKQ----NRKVARAPSLRYRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWI 110 (441)
Q Consensus 36 ~pl~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV 110 (441)
+||++++..|+.+.+... ....+ +++ .............+.++.+.+|+++|+||||||+|.|+|||||++|||
T Consensus 11 i~l~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV 89 (383)
T 2x0b_A 11 IFLKRMPSIRESLKERGVDMARLG-PEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV 89 (383)
T ss_dssp -----------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred EEEEECCcHHHHHHHhCchHHHHH-HhhccccccccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEE
Confidence 999998877776553221 11111 111 000000112224555566789999999999999999999999999999
Q ss_pred eCCCCC----CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCC
Q 042725 111 KCHKKA----PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSA 186 (441)
Q Consensus 111 ~c~~~~----~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~ 186 (441)
+|..|. .|..|+.||+++|+||+..+ |.|.+.|++|+ +.|.++.|+|+|++
T Consensus 90 ~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~------------------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~ 144 (383)
T 2x0b_A 90 PSSKCSRLYTACVYHKLFDASDSSSYKHNG------------------------TELTLRYSTGT-VSGFLSQDIITVGG 144 (383)
T ss_dssp EBTTSCTTSHHHHTSCCBCGGGCTTCEEEE------------------------EEEEEECSSCE-EEEEEEEEEEEETT
T ss_pred eccCCCCCcccccCCCCCCCCCCCcEEECC------------------------cEEEEEcCCcc-EEEEEEeeEEEEcC
Confidence 999995 68889999999999999865 48999999998 57999999999998
Q ss_pred CcccCCeEEEeeeCCC-------CcceeEeecCCCCCc----------cccc--ccCceeEecCCCCCCCCcCCccceee
Q 042725 187 AQSTLPLILGCAKDTS-------EDKGILGMNLGRLSF----------ASQA--KISKFSYCVPTRVSRVGYTPTGSFYL 247 (441)
Q Consensus 187 ~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~----------~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~l 247 (441)
..++ +.|||+.... .+|||||||++.++. .+|. ..+.|++||.+..... ....|.|+|
T Consensus 145 -~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~-~~~~G~l~f 221 (383)
T 2x0b_A 145 -ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENS-QSLGGQIVL 221 (383)
T ss_dssp -EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC-----CCEEEEE
T ss_pred -ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcc-cCCCcEEEE
Confidence 5788 9999998752 689999999988763 2342 2489999998753211 113899999
Q ss_pred CCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHHHHH
Q 042725 248 GENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNK 327 (441)
Q Consensus 248 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~ 327 (441)
|++|++ +|.+.+.+.+.. .+.||+|.|++|.|+++.+. +..++.+||||||+++++|.+++++
T Consensus 222 Gg~d~~---~y~G~l~~~pv~-----~~~~w~v~l~~i~v~~~~~~---------~~~~~~aiiDTGTs~~~lP~~~~~~ 284 (383)
T 2x0b_A 222 GGSDPQ---HYEGNFHYINLI-----KTGVWQIQMKGVSVGSSTLL---------CEDGCLALVDTGASYISGSTSSIEK 284 (383)
T ss_dssp SSCCGG---GEEEEEEEEEBS-----STTSCEEEECEEEESSCCCB---------STTCEEEEECTTCSSEEECHHHHHH
T ss_pred CCcChH---HcCCceEEEEcC-----CCceEEEEEeEEEeCCceEE---------cCCCcEEEEcCCCceEEcCHHHHHH
Confidence 999986 567777665443 24699999999999987642 2457789999999999999999999
Q ss_pred HHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEEEEcCCcEEEEeCC--CeEEE-EEEecCCC
Q 042725 328 IKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGG--GVHCV-GIGRSEML 404 (441)
Q Consensus 328 l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~--~~~C~-~i~~~~~~ 404 (441)
|.+++. +.. ..+.+.++|+... .+|+|+|+| +|.+|.|+|++|+++... +..|+ +|...+..
T Consensus 285 i~~~i~----a~~----~~g~~~v~C~~~~------~~P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 349 (383)
T 2x0b_A 285 LMEALG----AKK----RLFDYVVKCNEGP------TLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIP 349 (383)
T ss_dssp HHHHHT----CEE----CSSCEEEEGGGTT------TCCCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCC
T ss_pred HHHHhC----Ccc----cCCcEEEeccccc------cCceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEecccC
Confidence 886663 322 1345678998765 689999999 799999999999987642 45897 68765421
Q ss_pred --CCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 405 --GLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 405 --~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
..+.||||++|||++|+|||++|+|||||+++
T Consensus 350 ~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 350 PPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp TTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 24689999999999999999999999999974
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=5.2e-60 Score=467.03 Aligned_cols=337 Identities=21% Similarity=0.291 Sum_probs=257.9
Q ss_pred EeecccccccCCCCCCcCCccccc-cccccc--cCC---CCCcccccccceeEEEEEEEeeCCCCceEEEEEECCCCcee
Q 042725 36 FALISRRFSHDDLSPSYYSSFVSQ-TKQNRK--VAR---APSLRYRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSW 109 (441)
Q Consensus 36 ~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~---~~~~~~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lW 109 (441)
+||++++..|+.+.+......+++ +++... ..+ ......++.++.+.+|+++|+||||||+|.|+|||||++||
T Consensus 4 ipl~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lW 83 (370)
T 3psg_A 4 VPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLW 83 (370)
T ss_dssp EEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEE
T ss_pred EEeEEcCcHHHHHHhcCcHHHHHhhhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccE
Confidence 899988877765442111110110 111110 000 02334566777789999999999999999999999999999
Q ss_pred EeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCC
Q 042725 110 IKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAA 187 (441)
Q Consensus 110 V~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~ 187 (441)
|+|..|. .|..|+.||+++|+||+..+ |.|.+.|++|+ +.|.++.|+|+|++
T Consensus 84 V~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~- 137 (370)
T 3psg_A 84 VPSVYCSSLACSDHNQFNPDDSSTFEATS------------------------QELSITYGTGS-MTGILGYDTVQVGG- 137 (370)
T ss_dssp EEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------------------EEEEEESSSCE-EEEEEEEEEEEETT-
T ss_pred EECCCCCCcccCCCCCCCCccCcCcEECC------------------------cEEEEEeCCce-EEEEEEEEEEeeCC-
Confidence 9999997 79999999999999999865 48999999998 57999999999999
Q ss_pred cccCCeEEEeeeCCC-------CcceeEeecCCCCCcc----------ccc--ccCceeEecCCCCCCCCcCCccceeeC
Q 042725 188 QSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA----------SQA--KISKFSYCVPTRVSRVGYTPTGSFYLG 248 (441)
Q Consensus 188 ~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~----------~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG 248 (441)
..++++.|||+.... .++||||||++.++.. +|. ..+.|++||.+.. ...|.|+||
T Consensus 138 ~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~-----~~~G~l~fG 212 (370)
T 3psg_A 138 ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND-----DSGSVVLLG 212 (370)
T ss_dssp EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEET
T ss_pred cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC-----CCCeEEEEE
Confidence 688999999998763 4799999999876532 222 2478999998752 148999999
Q ss_pred CCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHHHHHH
Q 042725 249 ENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKI 328 (441)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l 328 (441)
++|++ +|.+.+.+.+.. .+.||+|.|++|+|+++.+. +..++.+||||||+++++|.+++++|
T Consensus 213 g~D~~---~y~g~l~~~pv~-----~~~~w~v~l~~i~v~g~~~~---------~~~~~~aiiDTGTs~~~lP~~~~~~i 275 (370)
T 3psg_A 213 GIDSS---YYTGSLNWVPVS-----VEGYWQITLDSITMDGETIA---------CSGGCQAIVDTGTSLLTGPTSAIANI 275 (370)
T ss_dssp CCCGG---GBSSCCEEEECS-----EETTEEEEECEEESSSSEEE---------CTTCEEEEECTTCCSEEEEHHHHHHH
T ss_pred eeChH---hcCCcceeeccc-----ccceeEEEEeEEEECCEEEe---------cCCCceEEEcCCCCcEECCHHHHHHH
Confidence 99986 455555443322 23599999999999998765 24567899999999999999999998
Q ss_pred HHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEEEEcCCcEEEEeCCCeEEE-EEEecCCC--C
Q 042725 329 KEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGGGVHCV-GIGRSEML--G 405 (441)
Q Consensus 329 ~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~~~~C~-~i~~~~~~--~ 405 (441)
.+++ ++... ..+.+.++|+... .+|+|+|+| +|.+|.||+++|+++ .+ ..|+ +|...+.. .
T Consensus 276 ~~~i----~a~~~---~~g~~~v~C~~~~------~lP~i~f~~-~g~~~~l~~~~yi~~-~~-~~C~~~~~~~~~~~~~ 339 (370)
T 3psg_A 276 QSDI----GASEN---SDGEMVISCSSID------SLPDIVFTI-DGVQYPLSPSAYILQ-DD-DSCTSGFEGMDVPTSS 339 (370)
T ss_dssp HHHT----TCEEC---TTCCEECCGGGGG------GCCCEEEEE-TTEEEEECHHHHEEE-CS-SCEEESEEEECCCTTS
T ss_pred HHHh----CCccc---CCCcEEEECCCcc------cCCcEEEEE-CCEEEEECHHHhccc-CC-CEEEEEEEeCCCCCCC
Confidence 8555 43321 1345778998754 689999999 799999999999998 33 4696 57664421 2
Q ss_pred CceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 406 LASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 406 ~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
++.||||++|||++|+|||++|+|||||+|+
T Consensus 340 ~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 340 GELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 3479999999999999999999999999975
No 3
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.3e-57 Score=453.65 Aligned_cols=337 Identities=19% Similarity=0.371 Sum_probs=264.5
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCC-------CC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTL-------PT 153 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~-------~~ 153 (441)
+.+|+++|.||||||+|.|+|||||+++||+|..| .+|+||+.+.|.++.|....+. .+ ..
T Consensus 19 ~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-----------~~Sst~~~v~C~s~~C~~~~~~-~~~~c~s~~~~ 86 (413)
T 3vla_A 19 TLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-----------YVSSTYRPVRCRTSQCSLSGSI-ACGDCFNGPRP 86 (413)
T ss_dssp TCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-----------CCCTTCEECBTTSHHHHHTTCC-EEECCSSCCBT
T ss_pred CCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-----------CCCCCcCccCCCcccccccccC-CCcccccCCCC
Confidence 56799999999999999999999999999999987 3899999999999999754321 11 12
Q ss_pred CCCCCCCcEEeEEeC-CCceEEeeEEEEEEeeCC--------CcccCCeEEEeeeCC------CCcceeEeecCCCCCcc
Q 042725 154 DCDQNRLCHYSYFYA-DGTFAEGNLVKEKFTFSA--------AQSTLPLILGCAKDT------SEDKGILGMNLGRLSFA 218 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg-~g~~~~G~~~~D~v~~g~--------~~~~~~~~fg~~~~~------~~~~GIlGLg~~~~s~~ 218 (441)
.|. ++.|.|.+.|+ +|+.+.|.+++|+|+|+. ...++++.|||+... ..++||||||++.++++
T Consensus 87 ~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~ 165 (413)
T 3vla_A 87 GCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALP 165 (413)
T ss_dssp TBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSSHH
T ss_pred CCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcchH
Confidence 343 46799999994 777778999999999973 146778999999874 25899999999999999
Q ss_pred ccccc-----CceeEecCCCCCCCCcCCccceeeCCCCCC--------CC-cceeeeeecCCCCCCCCC---CCceeEEe
Q 042725 219 SQAKI-----SKFSYCVPTRVSRVGYTPTGSFYLGENPNS--------AG-FRYVSFLTFPQSQRSPNL---DPLAYSVP 281 (441)
Q Consensus 219 ~q~~~-----~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~--------~~-~~~~~~~~~~~~~~~~~~---~~~~w~v~ 281 (441)
.|+.. ++|++||.+.. . ..|.|+||+.+.. +. +.|+|++..+.....+.. ...||+|.
T Consensus 166 sql~~~~~i~~~FS~cL~~~~--~---~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 166 SQFASAFSFKRKFAMCLSGST--S---SNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp HHHHHHHTCCSEEEEECCSCS--S---SCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred HHHhhhcCCCceEEEeCCCCC--C---CceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 98863 89999998741 1 4899999998742 24 778887754322111111 13599999
Q ss_pred eeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCC-CcccccccCCCcceeccCCccc
Q 042725 282 MQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGP-RMKKGYVYGGVADMCFDGNAME 360 (441)
Q Consensus 282 ~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~ 360 (441)
|++|+||++.+.++...+..+..+++++||||||++++||+++|++|.++|.+++.. ...... ...++..|+......
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~-~~~~~~~C~~~~~~~ 319 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVA-SVAPFGACFSTDNIL 319 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC-CCTTCSCEEECTTCC
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC-CCCCCcceeccCCcc
Confidence 999999999998887777766556788999999999999999999999999887631 111100 113457899876432
Q ss_pred c---cccccceEEEEcC-ceEEEEcCCcEEEEeCCCeEEEEEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 361 V---GRLIGDMVFEFER-GVEILIEKERVLADVGGGVHCVGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 361 ~---~~~lP~i~f~~~g-g~~~~i~~~~y~~~~~~~~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
. ...+|+|+|+|.| ++.|.|++++|+++..++..|++|+.......+.||||++|||++|+|||++|+|||||++.
T Consensus 320 ~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 320 STRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp EETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred ccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 1 1258999999964 38999999999998766778999877653333679999999999999999999999999953
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.6e-56 Score=436.11 Aligned_cols=304 Identities=20% Similarity=0.297 Sum_probs=240.7
Q ss_pred ccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCC
Q 042725 75 RSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLP 152 (441)
Q Consensus 75 ~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~ 152 (441)
++.+..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 16 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------------- 79 (351)
T 1tzs_A 16 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG---------------- 79 (351)
T ss_dssp TTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS----------------
T ss_pred eceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC----------------
Confidence 344445678899999999999999999999999999999997 78899999999999999854
Q ss_pred CCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCc--------
Q 042725 153 TDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSF-------- 217 (441)
Q Consensus 153 ~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~-------- 217 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++++.|||+.... .++||||||++.++.
T Consensus 80 --------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 149 (351)
T 1tzs_A 80 --------QSFSIQYGTGS-LSGIIGADQVSVEG-LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFD 149 (351)
T ss_dssp --------CEEEEESSSCE-EEEEEEEEEEEETT-EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHH
T ss_pred --------CEEEEEeCCCC-eEEEEEEeEEEECC-eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHH
Confidence 48999999998 57999999999998 588899999998753 579999999987653
Q ss_pred --cccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEee
Q 042725 218 --ASQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLD 293 (441)
Q Consensus 218 --~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~ 293 (441)
..|. ..+.|++||.+.... ...|.|+||+.|++ +|.+.+.+.+.. .+.||.|.|++|+|+++.+.
T Consensus 150 ~l~~qg~i~~~~FS~~L~~~~~~---~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 150 NMMAQNLVDLPMFSVYMSSNPEG---GAGSELIFGGYDHS---HFSGSLNWVPVT-----KQAYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp HHHHTTCCSSSEEEEECCCCC-----CTTCEEEETSCCGG---GBCSCCEEEECS-----EETTEEEEEEEEEETTEEEE
T ss_pred HHHHCCCCCCCEEEEEEcCCCCC---CCCCEEEECCCCHH---HcCCceEEEecC-----CCceEEEEeCEEEECCceEE
Confidence 2232 248999999875332 13899999999875 344444332221 23599999999999998753
Q ss_pred cCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEc
Q 042725 294 IPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFE 373 (441)
Q Consensus 294 ~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~ 373 (441)
+..++.+||||||+++++|.+++++|.+++. +.... +.+.++|+... .+|+|+|+|
T Consensus 219 ---------~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~----~~~~~----g~~~~~C~~~~------~~P~i~f~f- 274 (351)
T 1tzs_A 219 ---------CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG----AAPVD----GEYAVECANLN------VMPDVTFTI- 274 (351)
T ss_dssp ---------CTTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEECS----SSEEECGGGGG------GSCCEEEEE-
T ss_pred ---------cCCCceEEeccCCcceeCCHHHHHHHHHHhC----CcccC----CeEEEeCCCCc------cCCcEEEEE-
Confidence 1345679999999999999999999886663 22211 45668998754 589999999
Q ss_pred CceEEEEcCCcEEEEeCC--CeEEE-EEEecCCC--CCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 374 RGVEILIEKERVLADVGG--GVHCV-GIGRSEML--GLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 374 gg~~~~i~~~~y~~~~~~--~~~C~-~i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
+|.++.||+++|+++... +..|+ +|...+.. ..+.||||++|||++|+|||++++|||||+++|.+
T Consensus 275 ~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 275 NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp TTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 799999999999987542 35797 68765421 24579999999999999999999999999999865
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=7.6e-56 Score=430.42 Aligned_cols=294 Identities=23% Similarity=0.303 Sum_probs=240.7
Q ss_pred cccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCC
Q 042725 76 SKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPT 153 (441)
Q Consensus 76 ~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~ 153 (441)
+.+..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 8 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------------- 70 (323)
T 3cms_A 8 LTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG----------------- 70 (323)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------
T ss_pred eEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC-----------------
Confidence 34445778999999999999999999999999999999995 78889999999999999865
Q ss_pred CCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCcc--------
Q 042725 154 DCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA-------- 218 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~-------- 218 (441)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||+.... .++||||||++.++..
T Consensus 71 -------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 141 (323)
T 3cms_A 71 -------KPLSIHYGTGS-MQGILGYDTVTVSN-IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDN 141 (323)
T ss_dssp -------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHH
T ss_pred -------cEEEEEeCCCC-eEEEEEEEEEEECC-eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHH
Confidence 48999999998 57999999999998 588899999998753 5799999999876532
Q ss_pred --ccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeec
Q 042725 219 --SQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDI 294 (441)
Q Consensus 219 --~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~ 294 (441)
+|. ..+.|++||.+... .|.|+||+.|++ +|.+.+.+.+.. .+.||.|.+++|+|+++.+..
T Consensus 142 l~~q~~i~~~~FS~~l~~~~~------~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~~ 207 (323)
T 3cms_A 142 MMNRHLVAQDLFSVYMDRNGQ------ESMLTLGAIDPS---YYTGSLHWVPVT-----VQQYWQFTVDSVTISGVVVAC 207 (323)
T ss_dssp HHHTTCSSSSEEEEECCTTSS------CEEEEESCCCGG---GEEEEEEEEECS-----SBTTBEEEEEEEEETTEEEES
T ss_pred HHHCCCCCCCEEEEEECCCCC------CEEEEECCCChh---hccCceEEEECc-----cCCeEEEEEeeEEECCEEeec
Confidence 332 24899999976422 499999999976 566666654432 235999999999999988753
Q ss_pred CCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcC
Q 042725 295 PATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFER 374 (441)
Q Consensus 295 ~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~g 374 (441)
..++.+||||||+++++|++++++|.+++. +.... .+.+.++|+... .+|+|+|+| +
T Consensus 208 ---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----~~~~~---~g~~~~~C~~~~------~~P~i~f~f-~ 264 (323)
T 3cms_A 208 ---------EGGCQAILDTGTSKLVGPSSDILNIQQAIG----ATQNQ---YGEFDIDCDNLS------YMPTVVFEI-N 264 (323)
T ss_dssp ---------TTCEEEEECTTCCSEEECHHHHHHHHHHHT----CEEET---TTEEEECTTCTT------TSCCEEEEE-T
T ss_pred ---------CCCcEEEEecCCccEeCCHHHHHHHHHHhC----CeecC---CCcEEEECCCCc------cCceEEEEE-C
Confidence 245679999999999999999999987663 22211 244567898754 589999999 7
Q ss_pred ceEEEEcCCcEEEEeCCCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 375 GVEILIEKERVLADVGGGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 375 g~~~~i~~~~y~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
|.++.|||++|+++ ++..|+ +|+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 265 g~~~~i~~~~y~~~--~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 265 GKMYPLTPSAYTSQ--DQGFCTSGFQSEN--HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TEEEEECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHhccC--CCCEEEEEEEeCC--CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99999999999998 345797 587654 23579999999999999999999999999974
No 6
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.7e-55 Score=447.12 Aligned_cols=311 Identities=22% Similarity=0.288 Sum_probs=243.9
Q ss_pred cccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCC
Q 042725 74 YRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA---PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFT 150 (441)
Q Consensus 74 ~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~---~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~ 150 (441)
..+.++.+.+|+++|.||||||+|.|+|||||++|||+|..|. .|..|+.|||++|+||+..+
T Consensus 44 ~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-------------- 109 (478)
T 1qdm_A 44 VALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNG-------------- 109 (478)
T ss_dssp GGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCC--------------
T ss_pred EEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeCC--------------
Confidence 4555556788999999999999999999999999999999995 68889999999999999854
Q ss_pred CCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCc------
Q 042725 151 LPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSF------ 217 (441)
Q Consensus 151 ~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~------ 217 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++++.||++.... .++||||||++.++.
T Consensus 110 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~ 177 (478)
T 1qdm_A 110 ----------KPAAIQYGTGS-IAGYFSEDSVTVGD-LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPV 177 (478)
T ss_dssp ----------CEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCH
T ss_pred ----------cEEEEEcCCCC-eEEEEEEEEEEECC-eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcH
Confidence 47999999998 57999999999998 588899999998643 579999999987763
Q ss_pred ----cccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEE
Q 042725 218 ----ASQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKR 291 (441)
Q Consensus 218 ----~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~ 291 (441)
.+|. ..+.|++||.+.... ...|.|+||+.|++ +|.+.+.+.+.. ...||+|.+++|.|+++.
T Consensus 178 ~~~l~~qg~i~~~~FS~~L~~~~~~---~~~G~l~fGg~d~~---~~~G~l~~~pv~-----~~~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 178 WYKMIEQGLVSDPVFSFWLNRHVDE---GEGGEIIFGGMDPK---HYVGEHTYVPVT-----QKGYWQFDMGDVLVGGKS 246 (478)
T ss_dssp HHHHTTTTCCSSSEEEEECCCC--------CEEEEETCCCTT---SEEEEEEEEEEE-----EETTEEEEECCEEETTEE
T ss_pred HHHHHHCCCCCCCEEEEEeecCCCC---CCCeEEEeCCcCHh---hcCCCceEEecc-----CCCeEEEEEeEEEECCEE
Confidence 3332 247999999875321 14899999999986 455555543322 235999999999999987
Q ss_pred eecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHh-------------C---------C-Cc--------
Q 042725 292 LDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLA-------------G---------P-RM-------- 340 (441)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~-------------~---------~-~~-------- 340 (441)
+.+. ..++.+||||||+++++|.+++++|.++|.+.. + . +.
T Consensus 247 ~~~~--------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~ig 318 (478)
T 1qdm_A 247 TGFC--------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVG 318 (478)
T ss_dssp CSTT--------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTT
T ss_pred Eeec--------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccc
Confidence 6542 346789999999999999999999987773210 0 0 00
Q ss_pred ------------------c------------------------------------------------cccccCCCcceec
Q 042725 341 ------------------K------------------------------------------------KGYVYGGVADMCF 354 (441)
Q Consensus 341 ------------------~------------------------------------------------~~~~~~~~~~~C~ 354 (441)
. .....|.+.++|.
T Consensus 319 lC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~ 398 (478)
T 1qdm_A 319 LCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCG 398 (478)
T ss_dssp CC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGG
T ss_pred ccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecc
Confidence 0 0011345678887
Q ss_pred cCCcccccccccceEEEEcCceEEEEcCCcEEEEeCC--CeEEE-EEEecCC--CCCceeeechhhhcceEEEEECCCCE
Q 042725 355 DGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGG--GVHCV-GIGRSEM--LGLASNIFGNFHQQNLWVEFDLASRR 429 (441)
Q Consensus 355 ~~~~~~~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~--~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~r 429 (441)
... .+|+|+|+| +|..|.|+|++|+++... ...|+ +|...+. ..++.||||++|||++|+|||++|+|
T Consensus 399 ~~~------~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~r 471 (478)
T 1qdm_A 399 SLG------SMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLR 471 (478)
T ss_dssp GGT------TCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTE
T ss_pred ccc------ccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCE
Confidence 654 589999999 799999999999998653 35797 4765432 12468999999999999999999999
Q ss_pred EEEecCC
Q 042725 430 VGFAKAE 436 (441)
Q Consensus 430 iGfA~~~ 436 (441)
||||+++
T Consensus 472 IGfA~a~ 478 (478)
T 1qdm_A 472 IGFAKAA 478 (478)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999864
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.1e-55 Score=425.87 Aligned_cols=294 Identities=25% Similarity=0.320 Sum_probs=241.0
Q ss_pred cccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCC
Q 042725 76 SKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPT 153 (441)
Q Consensus 76 ~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~ 153 (441)
+.++.+.+|+++|+||||||+++|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 5 l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------------- 67 (320)
T 4aa9_A 5 LTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG----------------- 67 (320)
T ss_dssp ---CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------
T ss_pred ceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC-----------------
Confidence 34455788999999999999999999999999999999997 78889999999999999865
Q ss_pred CCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCc---------
Q 042725 154 DCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSF--------- 217 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~--------- 217 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++++.|||+.... .++||||||++.++.
T Consensus 68 -------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 138 (320)
T 4aa9_A 68 -------KPLSIHYGTGS-MEGFLGYDTVTVSN-IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDN 138 (320)
T ss_dssp -------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHH
T ss_pred -------cEEEEEECCcE-EEEEEEEEEEEECC-EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHH
Confidence 48999999998 57999999999999 688999999998754 479999999976543
Q ss_pred -cccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeec
Q 042725 218 -ASQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDI 294 (441)
Q Consensus 218 -~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~ 294 (441)
.+|. ..+.|++||.+. . ..|.|+||++|++ +|.+.+.+.+.. .+.||.|.+++|.|+++.+..
T Consensus 139 l~~~g~i~~~~Fs~~l~~~---~---~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~~i~v~~~~~~~ 204 (320)
T 4aa9_A 139 MMDRHLVARDLFSVYMDRN---G---QGSMLTLGAIDPS---YYTGSLHWVPVT-----LQQYWQFTVDSVTINGVAVAC 204 (320)
T ss_dssp HHHTTCSSSSEEEEECCSS---S---SCCEEEETCCCGG---GEEEEEEEEECS-----SBTTBEEEECEEEETTEEEES
T ss_pred HHhCCCCCCceEEEEeCCC---C---CCeEEEEcccCHH---HccCceEEEEcc-----cCCceEEEEeEEEECCEEecc
Confidence 2222 247899999875 1 4899999999986 567766654432 346999999999999988763
Q ss_pred CCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcC
Q 042725 295 PATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFER 374 (441)
Q Consensus 295 ~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~g 374 (441)
..+..+||||||+++++|++++++|++++ ++.... .+.+.++|+... .+|+|+|+| +
T Consensus 205 ---------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~----~~~~~~---~g~~~~~C~~~~------~~p~i~f~f-~ 261 (320)
T 4aa9_A 205 ---------VGGCQAILDTGTSVLFGPSSDILKIQMAI----GATENR---YGEFDVNCGNLR------SMPTVVFEI-N 261 (320)
T ss_dssp ---------TTCEEEEECTTCSSEEEEHHHHHHHHHHT----TCEECT---TSCEEECGGGGG------GCCCEEEEE-T
T ss_pred ---------CCCcEEEEECCCCcEECCHHHHHHHHHHh----CCcccC---CCcEEEeCCCCC------cCceEEEEE-C
Confidence 23567999999999999999999988665 332221 345678998754 589999999 7
Q ss_pred ceEEEEcCCcEEEEeCCCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 375 GVEILIEKERVLADVGGGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 375 g~~~~i~~~~y~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
|.++.||+++|+.+. +..|+ +|..... .+.||||++|||++|+|||++++|||||+++
T Consensus 262 g~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 262 GRDYPLSPSAYTSKD--QGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp TEEEEECHHHHEEEE--TTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHhccCC--CCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 999999999999873 35796 5776432 3579999999999999999999999999975
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.2e-54 Score=421.29 Aligned_cols=296 Identities=20% Similarity=0.327 Sum_probs=241.0
Q ss_pred ceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCC
Q 042725 79 KYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCD 156 (441)
Q Consensus 79 ~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~ 156 (441)
..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------------- 69 (329)
T 1dpj_A 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG-------------------- 69 (329)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC--------------------
Confidence 33578999999999999999999999999999999997 58889999999999999854
Q ss_pred CCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCcc----------c
Q 042725 157 QNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA----------S 219 (441)
Q Consensus 157 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~----------~ 219 (441)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||+.... .++||||||++.++.. +
T Consensus 70 ----~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 143 (329)
T 1dpj_A 70 ----TEFAIQYGTGS-LEGYISQDTLSIGD-LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQ 143 (329)
T ss_dssp ----EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred ----cEEEEEECCce-EEEEEEEEEEEECC-eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHh
Confidence 48999999995 67999999999998 588899999998643 5799999999877643 2
Q ss_pred c--cccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCC
Q 042725 220 Q--AKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPAT 297 (441)
Q Consensus 220 q--~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~ 297 (441)
| +..+.|++||.+.... ....|.|+||+.|++ +|.+.+.+.+.. .+.||.|.+++|+|+++.+..
T Consensus 144 qg~i~~~~Fs~~l~~~~~~--~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~~--- 210 (329)
T 1dpj_A 144 QDLLDEKRFAFYLGDTSKD--TENGGEATFGGIDES---KFKGDITWLPVR-----RKAYWEVKFEGIGLGDEYAEL--- 210 (329)
T ss_dssp TTCCSSSEEEEEECCGGGT--CSSSEEEEESSCCGG---GEEEEEEEEECS-----SBTTBEEEEEEEEETTEEEEC---
T ss_pred cCCcCCCEEEEEecCCCCC--CCCCcEEEEcCCChh---hcCCceEEEEcC-----CCceEEEEeeeEEECCeEecC---
Confidence 3 2348999999764321 113799999999976 566766654432 245999999999999987752
Q ss_pred ccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceE
Q 042725 298 AFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVE 377 (441)
Q Consensus 298 ~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~ 377 (441)
.+..+||||||+++++|++++++|.+++. +... ..+.+.++|+... .+|+|+|+| +|.+
T Consensus 211 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----~~~~---~~g~~~~~C~~~~------~~P~i~f~f-~g~~ 269 (329)
T 1dpj_A 211 -------ESHGAAIDTGTSLITLPSGLAEMINAEIG----AKKG---WTGQYTLDCNTRD------NLPDLIFNF-NGYN 269 (329)
T ss_dssp -------SSCEEEECTTCSCEEECHHHHHHHHHHHT----CEEC---TTSSEEECGGGGG------GCCCEEEEE-TTEE
T ss_pred -------CCccEEeeCCCCcEECCHHHHHHHHHHhC----CccC---CCCeEEEECCCCC------cCCcEEEEE-CCEE
Confidence 35679999999999999999999987763 2211 1345667897644 589999999 6999
Q ss_pred EEEcCCcEEEEeCCCeEEE-EEEecCC--CCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 378 ILIEKERVLADVGGGVHCV-GIGRSEM--LGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 378 ~~i~~~~y~~~~~~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
+.|+|++|+++.. ..|+ +|...+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 270 ~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 270 FTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9999999999875 4797 6776531 124689999999999999999999999999975
No 9
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=9.6e-55 Score=435.02 Aligned_cols=328 Identities=17% Similarity=0.289 Sum_probs=246.2
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCC-----C-CCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDF-----T-LPT 153 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~-----~-~~~ 153 (441)
.+.+|+++|.||||||+|.|+|||||++|||+|..| .+|+||+.+.|.++.|....+.. . ...
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-----------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 19 STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-----------YSSKTYQAPFCHSTQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-----------CCCSSCBCCCTTBHHHHHTTCCCEEECSSSCBT
T ss_pred CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-----------CCCCCCCccCCCCccccCccccCccccCCCCCC
Confidence 356799999999999999999999999999999876 47999999999988887543210 0 012
Q ss_pred CCCCCCCcEEeEEeC-CCceEEeeEEEEEEeeCCC----------cccCCeEEEeeeCC-------CCcceeEeecCCCC
Q 042725 154 DCDQNRLCHYSYFYA-DGTFAEGNLVKEKFTFSAA----------QSTLPLILGCAKDT-------SEDKGILGMNLGRL 215 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg-~g~~~~G~~~~D~v~~g~~----------~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~ 215 (441)
.|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++. ..++++.|||+... ..++||||||++.+
T Consensus 88 ~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 GCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp TBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred CCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 343 36799999998 7778889999999999862 36788999999874 25899999999999
Q ss_pred Ccccccc-----cCceeEecCCCCCCCCcCCccceeeCCCCCC-----------CCcceeeeeecCCCCCCCCCCCceeE
Q 042725 216 SFASQAK-----ISKFSYCVPTRVSRVGYTPTGSFYLGENPNS-----------AGFRYVSFLTFPQSQRSPNLDPLAYS 279 (441)
Q Consensus 216 s~~~q~~-----~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~w~ 279 (441)
+++.|++ .+.|++||.+... ..|.|+||+ |+. ..+.|+|++..+ ..||.
T Consensus 167 s~~~ql~~~~~~~~~FS~~L~~~~~-----~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~---------~~~y~ 231 (403)
T 3aup_A 167 SLPNQLASHFGLQRQFTTCLSRYPT-----SKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL---------QGEYN 231 (403)
T ss_dssp SHHHHHHHHHTCCSEEEEECCSCTT-----SCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT---------TSCEE
T ss_pred CHHHHHHhhcCCCCeEEEEcCCCCC-----CCeeEEECC-CchhccccccccccCceeecccccCC---------CCcce
Confidence 9988774 3789999987421 489999999 542 156677766431 14999
Q ss_pred EeeeeEEECCEEe-ecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcc-cccccCCCcceeccCC
Q 042725 280 VPMQGVRIQGKRL-DIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMK-KGYVYGGVADMCFDGN 357 (441)
Q Consensus 280 v~~~~i~v~g~~~-~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~-~~~~~~~~~~~C~~~~ 357 (441)
|.|++|+|+++.+ .++...+.++..++..+||||||++++||++++++|+++|.++++.... .......+.++|....
T Consensus 232 v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~ 311 (403)
T 3aup_A 232 VRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKIN 311 (403)
T ss_dssp ECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCC
T ss_pred EEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcC
Confidence 9999999999988 6666555544445667999999999999999999999999776543111 0000112334554332
Q ss_pred cccccccccceEEEEcCc--eEEEEcCCcEEEEeCCCeEEEEEEecCCCCCceeeechhhhcceEEEEECCCCEEEE---
Q 042725 358 AMEVGRLIGDMVFEFERG--VEILIEKERVLADVGGGVHCVGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGF--- 432 (441)
Q Consensus 358 ~~~~~~~lP~i~f~~~gg--~~~~i~~~~y~~~~~~~~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGf--- 432 (441)
.+|+|+|+|.|+ ..|.|++++|+++..++..|++|+.......+.||||++|||++|+|||++|+||||
T Consensus 312 ------~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~ 385 (403)
T 3aup_A 312 ------AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTS 385 (403)
T ss_dssp ------CCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESS
T ss_pred ------cCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecc
Confidence 589999999644 699999999999876566899988765322357999999999999999999999999
Q ss_pred ----ecCCCCcC
Q 042725 433 ----AKAECSRS 440 (441)
Q Consensus 433 ----A~~~c~~~ 440 (441)
++++|++.
T Consensus 386 ~~~~~~~~C~~~ 397 (403)
T 3aup_A 386 SLHSHGVKCADL 397 (403)
T ss_dssp CGGGGTCCGGGS
T ss_pred cccccCCCcccc
Confidence 66777653
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=8.7e-55 Score=424.14 Aligned_cols=296 Identities=22% Similarity=0.350 Sum_probs=242.0
Q ss_pred ceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCC
Q 042725 79 KYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCD 156 (441)
Q Consensus 79 ~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~ 156 (441)
..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------------- 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG-------------------- 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC--------------------
Confidence 44678999999999999999999999999999999997 58889999999999999865
Q ss_pred CCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCcc----------c
Q 042725 157 QNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA----------S 219 (441)
Q Consensus 157 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~----------~ 219 (441)
|.|.+.|++|+. .|.+++|+|+|++ ..++++.|||+.... .++||||||++.++.. +
T Consensus 69 ----~~~~i~Yg~gs~-~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 69 ----QTFSLQYGSGSL-TGFFGYDTLTVQS-IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETT-EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred ----cEEEEEeCCCCe-EEEEEeeeEEEcc-eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 489999999986 7999999999998 588899999998752 5799999999887643 2
Q ss_pred cc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCC
Q 042725 220 QA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPAT 297 (441)
Q Consensus 220 q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~ 297 (441)
|. ..+.|++||.+.... ..|.|+||+.|++ +|.+.+.+.+.. .+.||.|.+++|+|+++.+..
T Consensus 143 qg~i~~~~Fs~~L~~~~~~----~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~~--- 207 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGS----SGGAVVFGGVDSS---LYTGQIYWAPVT-----QELYWQIGIEEFLIGGQASGW--- 207 (329)
T ss_dssp TTCSSSSEEEEEECSSCSS----EEEEEEESSCCGG---GEEEEEEEEEBC-----SSSSCEEEECEEEETTEECCT---
T ss_pred cCCCCCCEEEEEEcCCCCC----CCcEEEEcccCHH---HcCCceEEEECC-----CCceEEEEEeEEEECCceeee---
Confidence 32 248999999875321 3899999999976 466666554432 245999999999999987531
Q ss_pred ccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceE
Q 042725 298 AFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVE 377 (441)
Q Consensus 298 ~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~ 377 (441)
+..++.+||||||+++++|++++++|.+++.+. ... .+.+.++|+... .+|+|+|+| +|.+
T Consensus 208 -----~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~----~~~---~g~~~~~C~~~~------~~P~i~f~f-~g~~ 268 (329)
T 1htr_B 208 -----CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ----EDE---YGQFLVNCNSIQ------NLPSLTFII-NGVE 268 (329)
T ss_dssp -----TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE----ECT---TSCEEECGGGGG------GSCCEEEEE-TTEE
T ss_pred -----cCCCceEEEecCCccEECCHHHHHHHHHHhCCe----ecC---CCeEEEeCCCcc------cCCcEEEEE-CCEE
Confidence 134567999999999999999999998766332 211 245668998754 589999999 7999
Q ss_pred EEEcCCcEEEEeCCCeEEE-EEEecCC--CCCc-eeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 378 ILIEKERVLADVGGGVHCV-GIGRSEM--LGLA-SNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 378 ~~i~~~~y~~~~~~~~~C~-~i~~~~~--~~~~-~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
+.|||++|+++.. + .|+ +|+..+. ..++ .||||++|||++|+|||++++|||||+++
T Consensus 269 ~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 269 FPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999999876 3 797 6776542 1234 89999999999999999999999999974
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.8e-55 Score=423.98 Aligned_cols=289 Identities=23% Similarity=0.374 Sum_probs=238.3
Q ss_pred ceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCC
Q 042725 79 KYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCD 156 (441)
Q Consensus 79 ~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~ 156 (441)
..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------------- 68 (324)
T 1am5_A 9 EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG-------------------- 68 (324)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC--------------------
Confidence 34678999999999999999999999999999999997 68889999999999999865
Q ss_pred CCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCCcc----------c
Q 042725 157 QNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA----------S 219 (441)
Q Consensus 157 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~----------~ 219 (441)
|.|.+.|++|+. .|.++.|+|+|++ ..++++.|||+.... .++||||||++.++.. +
T Consensus 69 ----~~~~i~Yg~Gs~-~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (324)
T 1am5_A 69 ----KTVDLTYGTGGM-RGILGQDTVSVGG-GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGS 142 (324)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEESSS-SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred ----cEEEEEECCCCe-EEEEEECceeECC-cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHh
Confidence 489999999986 7999999999998 588899999998752 5799999999876643 2
Q ss_pred cc--ccCceeEecCCCCCCCCcCCccceeeCCCCCC---CCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeec
Q 042725 220 QA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNS---AGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDI 294 (441)
Q Consensus 220 q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~ 294 (441)
|. ..+.|++||.+... ..|.|+||+.|++ +.+.|+|... +.||.|.+++|+|+++.+..
T Consensus 143 qg~i~~~~FS~~l~~~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~-----------~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 143 QSLVEKDLFSFYLSGGGA-----NGSEVMLGGVDNSHYTGSIHWIPVTA-----------EKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp TTCSSSSEEEEECCSTTC-----SCEEEEESSCCGGGBCSCCEEEEEEE-----------ETTEEEEECEEEETTEECCC
T ss_pred cCCCCCCEEEEEecCCCC-----CCcEEEECccCHHHcCCceEEEecCC-----------CcEEEEEEeEEEECCceeec
Confidence 22 24799999987521 4899999999875 3445555542 24999999999999987531
Q ss_pred CCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcC
Q 042725 295 PATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFER 374 (441)
Q Consensus 295 ~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~g 374 (441)
.+ +.+||||||+++++|++++++|.+++.+. . ..+.+.++|+... .+|+|+|+| +
T Consensus 207 ---------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~---~~g~~~~~C~~~~------~~P~i~f~f-~ 261 (324)
T 1am5_A 207 ---------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-----E---NQGEMMGNCASVQ------SLPDITFTI-N 261 (324)
T ss_dssp ---------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-----E---CCCCEECCTTSSS------SSCCEEEEE-T
T ss_pred ---------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-----c---cCCcEEEeCCCcc------cCCcEEEEE-C
Confidence 22 67999999999999999999998766332 1 1245668998754 589999999 7
Q ss_pred ceEEEEcCCcEEEEeCCCeEEE-EEEecCC--CCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 375 GVEILIEKERVLADVGGGVHCV-GIGRSEM--LGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 375 g~~~~i~~~~y~~~~~~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
|.++.||+++|+++. +..|+ +|...+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 262 g~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 262 GVKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp TEEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CEEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999999999986 45797 6876542 124589999999999999999999999999975
No 12
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.6e-54 Score=422.07 Aligned_cols=292 Identities=22% Similarity=0.322 Sum_probs=235.5
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQ 157 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~ 157 (441)
.+.+|+++|.||||+|+|.|+|||||++|||+|..|. .|..++.|||++|+||+.++|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~-------------------- 72 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG-------------------- 72 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT--------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC--------------------
Confidence 3667999999999999999999999999999999998 577899999999999998642
Q ss_pred CCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCCccc-----------
Q 042725 158 NRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLSFAS----------- 219 (441)
Q Consensus 158 ~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s~~~----------- 219 (441)
|.|.+.|++|+.+.|.++.|+|+|++ ..++++.|||+... ..++||||||++.++...
T Consensus 73 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 73 ---ASWSISYGDGSSSSGDVYTDKVTIGG-FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp ---CBEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred ---CeEEEEeCCCCcEEEEEEEEEEEECC-EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 47999999999778999999999998 58889999999864 368999999998766432
Q ss_pred --ccccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCC
Q 042725 220 --QAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPAT 297 (441)
Q Consensus 220 --q~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~ 297 (441)
|+..+.|++||.+. ..|.|+||++|++ +|.+.+.+.+... .+.||.|.+++|+|+++.+.
T Consensus 149 ~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~~~v~l~~i~v~~~~~~---- 210 (329)
T 3c9x_A 149 ASSLAEPLFTADLRHG-------QNGSYNFGYIDTS---VAKGPVAYTPVDN----SQGFWEFTASGYSVGGGKLN---- 210 (329)
T ss_dssp HTTSSSSEEEEECCSS-------SCEEEEESSCCGG---GCSSCEEEEECBC----TTSSCEEEECCEEETTCCCC----
T ss_pred HHhcCCCEEEEEecCC-------CCcEEEEeCcChh---hcccceEEEEccC----CCceEEEEEeeEEECCEecc----
Confidence 33458999999752 3899999999975 3444444433321 24599999999999997653
Q ss_pred ccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceE
Q 042725 298 AFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVE 377 (441)
Q Consensus 298 ~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~ 377 (441)
..+..+||||||+++++|++++++|++++.+ +.... ..+.+.++|+. .+|+|+|+| +|.+
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~---a~~~~--~~~~~~~~C~~--------~~P~i~f~f-~g~~ 270 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQS---AQYDN--QQEGVVFDCDE--------DLPSFSFGV-GSST 270 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCTT---CEEET--TTTEEEEETTC--------CCCCEEEEE-TTEE
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCCC---cEEcC--CCCEEEEECCC--------CCCcEEEEE-CCEE
Confidence 2356799999999999999999998865532 22111 12345678973 489999999 6999
Q ss_pred EEEcCCcEEEEeC--CCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecC
Q 042725 378 ILIEKERVLADVG--GGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKA 435 (441)
Q Consensus 378 ~~i~~~~y~~~~~--~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~ 435 (441)
+.||+++|++... +...|++ |+... ..+.||||++|||++|+|||++|+|||||+.
T Consensus 271 ~~ip~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 271 ITIPGDLLNLTPLEEGSSTCFGGLQSSS--GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEECGGGGEEEESSTTCSEEEESEEECT--TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred EEECHHHeeeeccCCCCCeEEEEEEcCC--CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 9999999998763 2368975 66553 2357999999999999999999999999974
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.2e-54 Score=428.58 Aligned_cols=300 Identities=20% Similarity=0.271 Sum_probs=243.0
Q ss_pred ccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCC
Q 042725 77 KFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA---PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPT 153 (441)
Q Consensus 77 ~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~---~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~ 153 (441)
.+..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 13 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~----------------- 75 (361)
T 1mpp_A 13 YDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETD----------------- 75 (361)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEE-----------------
T ss_pred ecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecC-----------------
Confidence 3334678999999999999999999999999999999997 79899999999999999865
Q ss_pred CCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC------------CcceeEeecCCCCCcc---
Q 042725 154 DCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS------------EDKGILGMNLGRLSFA--- 218 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~------------~~~GIlGLg~~~~s~~--- 218 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++++.|||+.... .++||||||++.++..
T Consensus 76 -------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 146 (361)
T 1mpp_A 76 -------YNLNITYGTGG-ANGIYFRDSITVGG-ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAE 146 (361)
T ss_dssp -------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHH
T ss_pred -------CeEEEEECCce-EEEEEEEEEEEECC-EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccc
Confidence 48999999998 57999999999998 588999999998642 4799999999866542
Q ss_pred -------------cc--cccCceeEecCCCCCCCCcCCccceeeCCCCCC---CCcceeeeeecCCCCCCCCCCCceeEE
Q 042725 219 -------------SQ--AKISKFSYCVPTRVSRVGYTPTGSFYLGENPNS---AGFRYVSFLTFPQSQRSPNLDPLAYSV 280 (441)
Q Consensus 219 -------------~q--~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~w~v 280 (441)
+| +..+.|++||.+. . ..|.|+||++|++ +.+.|+|.....+ ...||.|
T Consensus 147 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~---~---~~G~l~fGg~d~~~~~g~l~~~p~~~~~~-------~~~~~~v 213 (361)
T 1mpp_A 147 YGDTYNTVHVNLYKQGLISSPVFSVYMNTN---D---GGGQVVFGGVNNTLLGGDIQYTDVLKSRG-------GYFFWDA 213 (361)
T ss_dssp HSCCCCCHHHHHHHTTSSSSSEEEEECCCS---S---SEEEEEESSCCGGGBSSCCEEEECEEETT-------EEEEEEE
T ss_pred ccccCCCHHHHHHHcCCCCCcEEEEEecCC---C---CCcEEEEecCChhhcCCceEEEEcccCCC-------ceeEEEE
Confidence 23 2248999999874 1 4899999999875 3455555543221 1239999
Q ss_pred eeeeEEECCEEeecCCCccccCCCCCCcEE-EccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcc
Q 042725 281 PMQGVRIQGKRLDIPATAFHPDASGSGQTI-VDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAM 359 (441)
Q Consensus 281 ~~~~i~v~g~~~~~~~~~~~~~~~~~~~~i-vDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~ 359 (441)
.|++|+|+++.+.. ..+..+| |||||+++++|++++++|++++.+. ... ..+.+.++|+...
T Consensus 214 ~l~~i~v~~~~~~~---------~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~----~~~--~~g~~~~~C~~~~-- 276 (361)
T 1mpp_A 214 PVTGVKIDGSDAVS---------FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPD----ATE--SQQGYTVPCSKYQ-- 276 (361)
T ss_dssp EEEEEEETTEEEEE---------EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTT----CEE--ETTEEEEEHHHHT--
T ss_pred EEeEEEECCeeecc---------CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCc----ccC--CCCcEEEECCCcc--
Confidence 99999999987642 1345699 9999999999999999998776432 111 1344668998643
Q ss_pred cccccc-cceEEEEc-C-----ceEEEEcCCcEEEEeC-CCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEE
Q 042725 360 EVGRLI-GDMVFEFE-R-----GVEILIEKERVLADVG-GGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRV 430 (441)
Q Consensus 360 ~~~~~l-P~i~f~~~-g-----g~~~~i~~~~y~~~~~-~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ri 430 (441)
.+ |+|+|+|. + |.++.||+++|+++.. ++..|+ +|+... .+.||||++|||++|+|||++++||
T Consensus 277 ----~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~fl~~~yvvfD~~~~~i 349 (361)
T 1mpp_A 277 ----DSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNLFLRFFVNVYDFGKNRI 349 (361)
T ss_dssp ----TCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHHHHTTEEEEEETTTTEE
T ss_pred ----cCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChHHhccEEEEEECCCCEE
Confidence 46 99999993 4 8999999999999875 346896 787652 3579999999999999999999999
Q ss_pred EEecCCCCc
Q 042725 431 GFAKAECSR 439 (441)
Q Consensus 431 GfA~~~c~~ 439 (441)
|||+++|+.
T Consensus 350 gfa~~~~~~ 358 (361)
T 1mpp_A 350 GFAPLASGY 358 (361)
T ss_dssp EEEEBCTTT
T ss_pred EEEEcccCC
Confidence 999999975
No 14
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.7e-54 Score=419.71 Aligned_cols=291 Identities=18% Similarity=0.277 Sum_probs=232.9
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC-CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA-PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQN 158 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~-~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~ 158 (441)
.+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~~~---------------------- 70 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQADG---------------------- 70 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEEEE----------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeeeCC----------------------
Confidence 3677999999999999999999999999999998887 35678999999999999844
Q ss_pred CCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC------CcceeEeecCCCCCcc-------c----c-
Q 042725 159 RLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS------EDKGILGMNLGRLSFA-------S----Q- 220 (441)
Q Consensus 159 ~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~------~~~GIlGLg~~~~s~~-------~----q- 220 (441)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||+.... .++||||||++.++.. . |
T Consensus 71 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg 147 (325)
T 2apr_A 71 --RTWSISYGDGSSASGILAKDNVNLGG-LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQG 147 (325)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTT
T ss_pred --CEEEEEECCCCCEEEEEEEEEEEECC-EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcC
Confidence 48999999998788999999999998 588899999998753 3899999999876532 2 2
Q ss_pred -cccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCcc
Q 042725 221 -AKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATAF 299 (441)
Q Consensus 221 -~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~~ 299 (441)
+..+.|++||.+.... ..|.|+||+.|++ +|.+.+.+.+... .+.||.|.+++|+|++. +.
T Consensus 148 ~i~~~~FS~~l~~~~~~----~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~~~v~l~~i~vg~~-~~------ 209 (325)
T 2apr_A 148 LISRPIFGVYLGKAKNG----GGGEYIFGGYDST---KFKGSLTTVPIDN----SRGWWGITVDRATVGTS-TV------ 209 (325)
T ss_dssp SCSSSEEEEEECCGGGT----CCEEEEETCCCGG---GBCSCCEEEECBC----TTSSCEEEECEEEETTE-EE------
T ss_pred CCCCceEEEEecCCCCC----CCCEEEEccCCch---hccCceEEEEccC----CCCEEEEEEeEEEECCE-ec------
Confidence 2348999999654221 4899999999875 3444444433221 24599999999999993 32
Q ss_pred ccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEEE
Q 042725 300 HPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEIL 379 (441)
Q Consensus 300 ~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~~ 379 (441)
..+..+||||||+++++|+++++++.+++.+.+... +.+.++|+.. .+|+|+|+| +|.++.
T Consensus 210 ----~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-------g~~~~~C~~~-------~~p~i~f~f-~g~~~~ 270 (325)
T 2apr_A 210 ----ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-------GTYTISCDTS-------AFKPLVFSI-NGASFQ 270 (325)
T ss_dssp ----ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-------SCEEECSCGG-------GCCCEEEEE-TTEEEE
T ss_pred ----CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-------CeEEEECCCC-------CCCcEEEEE-CCEEEE
Confidence 234579999999999999999999887775443211 3456789741 389999999 566999
Q ss_pred EcCCcEEEEeCCCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 380 IEKERVLADVGGGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 380 i~~~~y~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
||+++|+++.. +..|++ |.... .+.||||++|||++|+|||++|+|||||+++
T Consensus 271 ip~~~~~~~~~-~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 271 VSPDSLVFEEF-QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ECGGGGEEEEE-TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECHHHEEEcCC-CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 99999998754 457975 55543 3579999999999999999999999999864
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6e-55 Score=426.03 Aligned_cols=290 Identities=23% Similarity=0.365 Sum_probs=237.6
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCC--CCC---------CCCCCCCCCCCCCCCcccccCCCCCCCCCccCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCH--KKA---------PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDF 149 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~--~~~---------~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~ 149 (441)
+.+|+++|.||||+|+|.|+|||||+++||+|. .|. .|..++.|||++|+||+..+
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (334)
T 1j71_A 11 GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------- 77 (334)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-------------
Confidence 567999999999999999999999999999754 443 47789999999999999865
Q ss_pred CCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCCCcceeEeecCCCC--------Cccccc
Q 042725 150 TLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTSEDKGILGMNLGRL--------SFASQA 221 (441)
Q Consensus 150 ~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~~~~GIlGLg~~~~--------s~~~q~ 221 (441)
|.|.+.|++|+.+.|.++.|+|+|++ ..++++.|||+......+||||||++.. +++.+|
T Consensus 78 -----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~GilGLg~~~~~~~~~~~~~~~~~L 145 (334)
T 1j71_A 78 -----------QDFSIEYGDLTSSQGSFYKDTVGFGG-ISIKNQQFADVTTTSVDQGIMGIGFTADEAGYNLYDNVPVTL 145 (334)
T ss_dssp -----------EEEEEEBTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEESSSSCEEECSCGGGSSTTCCCCCHHHHH
T ss_pred -----------CceEEEECCCCEEEEEEEEEEEEECC-EEEccEEEEEEEecCCCccEEEEcCCcccCccccCCcHHHHH
Confidence 48999999998888999999999998 5889999999998889999999999764 333333
Q ss_pred ----c--cCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecC
Q 042725 222 ----K--ISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIP 295 (441)
Q Consensus 222 ----~--~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~ 295 (441)
. .+.|++||.+.. ...|.|+||+.|++ +|.+.+.+.+.. ...+|.|.+++|.|+++.+..
T Consensus 146 ~~qg~i~~~~Fs~~l~~~~-----~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~~~- 211 (334)
T 1j71_A 146 KKQGIINKNAYSLYLNSED-----ASTGKIIFGGVDNA---KYTGTLTALPVT-----SSVELRVHLGSINFDGTSVST- 211 (334)
T ss_dssp HHTTSCSSSEEEEECCCTT-----CSEEEEEETEEETT---SEEEEEEEEECC-----CSSSCEEEEEEEEETTEEEEE-
T ss_pred HHCCCCCccEEEEEeCCCC-----CCCeEEEEeeechH---HccCceEEEEcc-----CCCeEEEEEeEEEECCEeccC-
Confidence 2 378999997642 14899999999876 567766654433 234999999999999988752
Q ss_pred CCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCc-ceeccCCcccccccccceEEEEcC
Q 042725 296 ATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVA-DMCFDGNAMEVGRLIGDMVFEFER 374 (441)
Q Consensus 296 ~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~lP~i~f~~~g 374 (441)
++.+||||||+++++|++++++|++++.+.. .. ..+.+. ++|+. +|+|+|+|.+
T Consensus 212 ----------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~----~~--~~~~~~~~~C~~---------~p~i~f~f~~ 266 (334)
T 1j71_A 212 ----------NADVVLDSGTTITYFSQSTADKFARIVGATW----DS--RNEIYRLPSCDL---------SGDAVFNFDQ 266 (334)
T ss_dssp ----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE----ET--TTTEEECSSSCC---------CSEEEEEEST
T ss_pred ----------CccEEEeCCCCcEecCHHHHHHHHHHcCCcc----cC--CCceEEEEcCCC---------CCceEEEEcC
Confidence 2469999999999999999999987775433 11 112345 78864 6799999976
Q ss_pred ceEEEEcCCcEEEEeCCCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 375 GVEILIEKERVLADVGGGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 375 g~~~~i~~~~y~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
|.++.||+++|+++..++..|+ +|... +.||||++|||++|+|||++++|||||+++|++
T Consensus 267 g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 267 GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 8999999999999865444596 56543 249999999999999999999999999999975
No 16
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4.7e-54 Score=425.21 Aligned_cols=295 Identities=19% Similarity=0.253 Sum_probs=243.4
Q ss_pred cccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCC
Q 042725 74 YRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTL 151 (441)
Q Consensus 74 ~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~ 151 (441)
.++.+..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 54 ~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 118 (375)
T 1miq_A 54 IELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG--------------- 118 (375)
T ss_dssp CCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE---------------
T ss_pred EEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC---------------
Confidence 4555566789999999999999999999999999999999996 78899999999999999865
Q ss_pred CCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeC----C-----CCcceeEeecCCCCCcc----
Q 042725 152 PTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKD----T-----SEDKGILGMNLGRLSFA---- 218 (441)
Q Consensus 152 ~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~----~-----~~~~GIlGLg~~~~s~~---- 218 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..+++ .|||+.. . ..++||||||++.++..
T Consensus 119 ---------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~-~Fg~~~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~ 186 (375)
T 1miq_A 119 ---------TKVDITYGSGT-VKGFFSKDLVTLGH-LSMPY-KFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDP 186 (375)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEE-EEEEEEECGGGTTHHHHSCCCEEEECSSCCTTCSSCCC
T ss_pred ---------cEEEEEeCCCe-EEEEEEEEEEEEcC-ceECc-EEEEEEeccccccccccCCCceEEeCCCCcccccCCCC
Confidence 48999999998 57999999999998 57888 9999998 3 47899999999887643
Q ss_pred ------ccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCE
Q 042725 219 ------SQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGK 290 (441)
Q Consensus 219 ------~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~ 290 (441)
+|. ..+.|++||.+... ..|.|+||++|++ +|.+.+.+.+.. .+.||.|.++ |+|+++
T Consensus 187 ~~~~l~~qg~i~~~~FS~~L~~~~~-----~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 187 IVVELKNQNKIDNALFTFYLPVHDV-----HAGYLTIGGIEEK---FYEGNITYEKLN-----HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp HHHHHHHTTSSSSSEEEEECCTTCT-----TEEEEEESSCCGG---GEEEEEEEEEBS-----SSSSSEEEEE-EEETTE
T ss_pred HHHHHHhccCcCCCEEEEEecCCCC-----CCeEEEEcccCHH---HcCCceEEEecC-----CCceEEEEEE-EEECCE
Confidence 232 24899999987521 4899999999976 566666654432 2459999999 999998
Q ss_pred EeecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEE
Q 042725 291 RLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVF 370 (441)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f 370 (441)
.+ .++.+||||||+++++|++++++|.+++.+.. .. ..+.+.++|+. . .+|+|+|
T Consensus 253 ~~------------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~--~~g~~~~~C~~-~------~~P~i~f 307 (375)
T 1miq_A 253 TM------------EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----VP--FLPFYVTTCDN-K------EMPTLEF 307 (375)
T ss_dssp EE------------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CT--TSSCEEEETTC-T------TCCCEEE
T ss_pred Ec------------ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----cC--CCCeEEEECCC-C------CCCcEEE
Confidence 76 13469999999999999999999987764321 11 13456789987 2 5899999
Q ss_pred EEcCceEEEEcCCcEEEEeC--CCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 371 EFERGVEILIEKERVLADVG--GGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 371 ~~~gg~~~~i~~~~y~~~~~--~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
.| +|.+|.|||++|+++.. ++..|+ +|+..+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 308 ~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 308 KS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDID-SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCSS-SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCC-CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99 79999999999999874 345896 78876532 2589999999999999999999999999974
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.6e-54 Score=420.51 Aligned_cols=290 Identities=22% Similarity=0.364 Sum_probs=232.6
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQN 158 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~ 158 (441)
+.+|+++|.||||+|+|.|+|||||+++||+|..|. .| .++.|||++|+||+.+.|
T Consensus 14 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~--------------------- 71 (329)
T 1oew_A 14 DDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG--------------------- 71 (329)
T ss_dssp CCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE---------------------
T ss_pred CCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC---------------------
Confidence 567899999999999999999999999999999887 55 889999999999998642
Q ss_pred CCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCCcc-------------
Q 042725 159 RLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLSFA------------- 218 (441)
Q Consensus 159 ~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------- 218 (441)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||+... ..++||||||++.++..
T Consensus 72 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 148 (329)
T 1oew_A 72 --ATWSISYGDGSSSSGDVYTDTVSVGG-LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAK 148 (329)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHT
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECC-EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHH
Confidence 48999999998778999999999998 58899999999874 36899999999876543
Q ss_pred cccccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCc
Q 042725 219 SQAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATA 298 (441)
Q Consensus 219 ~q~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~ 298 (441)
+|+..+.|++||.+. ..|.|+||++|++ +|.+.+.+.+... .+.||.|.+++|+|+++.+.
T Consensus 149 ~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~~~v~l~~i~v~~~~~~----- 209 (329)
T 1oew_A 149 ASLDSPVFTADLGYH-------APGTYNFGFIDTT---AYTGSITYTAVST----KQGFWEWTSTGYAVGSGTFK----- 209 (329)
T ss_dssp TTSSSSEEEEECCSS-------SCEEEEESCCCTT---SSSSCCEEEECBC----TTSSCEEEEEEEEETTSCCE-----
T ss_pred HhccCcEEEEEccCC-------CCeEEEEeccChH---hcccceEEEEccC----CCceEEEEEeeEEECCeecc-----
Confidence 233458999999752 3899999999976 3444444333221 24599999999999997553
Q ss_pred cccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEE
Q 042725 299 FHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEI 378 (441)
Q Consensus 299 ~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~ 378 (441)
..++.+||||||+++++|++++++|++++.+ +.... ..+.+.++|+. .+|+|+|+| +|.++
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~---a~~~~--~~g~~~~~C~~--------~~P~i~f~f-gg~~~ 270 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVSG---AKSSS--SVGGYVFPCSA--------TLPSFTFGV-GSARI 270 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEET--TTTEEEEETTC--------CCCCEEEEE-TTEEE
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCCC---cEEcC--CCCEEEEECCC--------CCCcEEEEE-CCEEE
Confidence 1245799999999999999999998866532 22111 12345678973 489999999 79999
Q ss_pred EEcCCcEEEEeC--CCeEEEE-EEecCCCCCceeeechhhhcceEEEEEC-CCCEEEEecC
Q 042725 379 LIEKERVLADVG--GGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDL-ASRRVGFAKA 435 (441)
Q Consensus 379 ~i~~~~y~~~~~--~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~riGfA~~ 435 (441)
.||+++|+++.. +...|++ |.... ..+.||||++|||++|+|||+ +++|||||++
T Consensus 271 ~ip~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 271 VIPGDYIDFGPISTGSSSCFGGIQSSA--GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EECHHHHEEEESSTTCSEEEESEEEST--TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred EECHHHeeeeecCCCCCeEEEEEEeCC--CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 999999998753 2468975 66543 235799999999999999999 9999999974
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.8e-54 Score=421.93 Aligned_cols=302 Identities=22% Similarity=0.323 Sum_probs=243.2
Q ss_pred ccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC----CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCC
Q 042725 75 RSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA----PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFT 150 (441)
Q Consensus 75 ~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~----~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~ 150 (441)
++.++.+.+|+++|.||||||+++|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 11 ~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~-------------- 76 (341)
T 3k1w_A 11 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG-------------- 76 (341)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred cceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECC--------------
Confidence 444555788999999999999999999999999999999886 57889999999999999854
Q ss_pred CCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC-------CcceeEeecCCCCC-------
Q 042725 151 LPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS-------EDKGILGMNLGRLS------- 216 (441)
Q Consensus 151 ~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s------- 216 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..+ ++.|||+.... .++||||||++..+
T Consensus 77 ----------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 143 (341)
T 3k1w_A 77 ----------TELTLRYSTGT-VSGFLSQDIITVGG-ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPI 143 (341)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETT-EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred ----------CEEEEEECCcE-EEEEEEEEEEEECC-cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCH
Confidence 48999999998 67999999999999 577 99999998754 46999999998765
Q ss_pred ---ccccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEE
Q 042725 217 ---FASQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKR 291 (441)
Q Consensus 217 ---~~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~ 291 (441)
+.+|. ..+.|++||.+..... ....|.|+||++|++ +|.+.+.+.+.. .+.+|.|.+++|.|+++.
T Consensus 144 ~~~l~~qg~i~~~~Fs~~l~~~~~~~-~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 144 FDNIISQGVLKEDVFSFYYNRDSENS-QSLGGQIVLGGSDPQ---HYEGNFHYINLI-----KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp HHHHHHHTCBSSSEEEEEECCCC------CCEEEEESSCCGG---GEEEEEEEEECS-----STTSCEEEECCEEETTEE
T ss_pred HHHHHHCCCCCCCEEEEEEeCCCCcC-CCCCCEEEECccChH---HccCceEEEecC-----CCCEEEEEEeEEEECCEE
Confidence 23332 3478999998754211 124899999999986 567776654433 346999999999999987
Q ss_pred eecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEE
Q 042725 292 LDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFE 371 (441)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~ 371 (441)
+.. ..+..+||||||+++++|++++++|++++.+. ... .| +.++|+... .+|+|+|+
T Consensus 215 ~~~---------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~~~---~g-~~~~C~~~~------~~p~i~f~ 271 (341)
T 3k1w_A 215 LLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAK----KRL---FD-YVVKCNEGP------TLPDISFH 271 (341)
T ss_dssp EEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECS---SC-EEEEGGGGG------GCCCEEEE
T ss_pred eec---------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCe----ecC---CC-eEEeCCCCC------cCCcEEEE
Confidence 542 34567999999999999999999998766322 211 23 678998654 58999999
Q ss_pred EcCceEEEEcCCcEEEEeC--CCeEEE-EEEecCC--CCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 372 FERGVEILIEKERVLADVG--GGVHCV-GIGRSEM--LGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 372 ~~gg~~~~i~~~~y~~~~~--~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
| +|.++.|++++|++... ++..|+ +|...+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 272 f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 272 L-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp E-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred E-CCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9 79999999999998753 356897 6776432 123579999999999999999999999999975
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.3e-54 Score=420.45 Aligned_cols=295 Identities=22% Similarity=0.359 Sum_probs=239.6
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEe-----CCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIK-----CHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDC 155 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~-----c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c 155 (441)
+..|+++|.||||||++.|+|||||+++||+ |..|..|..++.||+++|+||+..+
T Consensus 11 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~------------------- 71 (339)
T 3fv3_A 11 GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLG------------------- 71 (339)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEE-------------------
T ss_pred CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCC-------------------
Confidence 4568899999999999999999999999997 7666578889999999999999875
Q ss_pred CCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCCCcceeEeecCCCCC----------------ccc
Q 042725 156 DQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTSEDKGILGMNLGRLS----------------FAS 219 (441)
Q Consensus 156 ~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~~~~GIlGLg~~~~s----------------~~~ 219 (441)
|.|.+.|++|+.+.|.++.|+|+|++ ..++++.|||+......+||||||++..+ ++.
T Consensus 72 -----~~~~i~Yg~gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~ 145 (339)
T 3fv3_A 72 -----AAFTIRYGDGSTSQGTWGKDTVTING-VSITGQQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPV 145 (339)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEESSSSCEEECSCGGGCCCBCTTSCBCSCCCCCHHH
T ss_pred -----ceEEEEECCCceEEEEEEEEEEEECC-EEECceEEEEEEecCCCceeEEecCccccccccccccccCccCCcHHH
Confidence 48999999998888999999999999 58899999999998889999999997654 222
Q ss_pred cc----c--cCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEee
Q 042725 220 QA----K--ISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLD 293 (441)
Q Consensus 220 q~----~--~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~ 293 (441)
|| . .+.|++||.+... ..|.|+||++|++ +|.+.+.+.+.. .+.+|.|.+++|.|+++.+.
T Consensus 146 ~L~~~g~i~~~~fsl~l~~~~~-----~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~~ 212 (339)
T 3fv3_A 146 TLKKQGKIRTNAYSLYLNSPSA-----ETGTIIFGGVDNA---KYSGKLVAEQVT-----SSQALTISLASVNLKGSSFS 212 (339)
T ss_dssp HHHHTTSCSSSEEEEECCCTTC-----SEEEEEETEEETT---SBSSCCEEEEBC-----CSSSCEEEEEEEEESSCEEE
T ss_pred HHHHCCCCCCceEEEEECCCCC-----CCeEEEEeeechH---HeecceEEEecc-----cCccEEEEEEEEEECCEeec
Confidence 33 2 3689999976421 4899999998876 345544443322 23499999999999998775
Q ss_pred cCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEc
Q 042725 294 IPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFE 373 (441)
Q Consensus 294 ~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~ 373 (441)
. +..++|||||+++++|++++++|++++.+..... ....+.+.++|+.. .+|+|+|+|.
T Consensus 213 ~-----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~~-------~~p~i~f~f~ 271 (339)
T 3fv3_A 213 F-----------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNTD-------TSGTTVFNFG 271 (339)
T ss_dssp E-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTCC-------CCSEEEEEET
T ss_pred C-----------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCCC-------CCCcEEEEEC
Confidence 3 2459999999999999999999997775332100 00124566899862 4789999996
Q ss_pred CceEEEEcCCcEEEEeCCCeEE-EEEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCcC
Q 042725 374 RGVEILIEKERVLADVGGGVHC-VGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSRS 440 (441)
Q Consensus 374 gg~~~~i~~~~y~~~~~~~~~C-~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~~ 440 (441)
+|.++.||+++|+++..+ ..| ++|... +.||||++|||++|+|||++++|||||+++|++.
T Consensus 272 ~g~~~~v~~~~~~~~~~~-~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 333 (339)
T 3fv3_A 272 NGAKITVPNTEYVYQNGD-GTCLWGIQPS-----DDTILGDNFLRHAYLLYNLDANTISIAQVKYTTD 333 (339)
T ss_dssp TSCEEEEEGGGGEEECSS-SCEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred CCCEEEECHHHheeeCCC-CeEEEEEEeC-----CcEEeChHHHhCEEEEEECCCCEEEEEecCCCCc
Confidence 589999999999998644 468 578762 3599999999999999999999999999999853
No 20
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.5e-53 Score=428.94 Aligned_cols=296 Identities=16% Similarity=0.214 Sum_probs=243.0
Q ss_pred ccccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCC
Q 042725 73 RYRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFT 150 (441)
Q Consensus 73 ~~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~ 150 (441)
..++.+..+.+|+++|+||||||++.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 128 ~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~-------------- 193 (451)
T 3qvc_A 128 NVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD-------------- 193 (451)
T ss_dssp CCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE--------------
T ss_pred ccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC--------------
Confidence 34566667889999999999999999999999999999999996 79999999999999999854
Q ss_pred CCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeC----C-----CCcceeEeecCCCCCc----
Q 042725 151 LPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKD----T-----SEDKGILGMNLGRLSF---- 217 (441)
Q Consensus 151 ~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~----~-----~~~~GIlGLg~~~~s~---- 217 (441)
|.|.+.|++|+ +.|.++.|+|+||+ ..++ +.|||+.. . ..++||||||++.++.
T Consensus 194 ----------~~f~i~YgdGs-~~G~~~~Dtv~igg-~~v~-~~Fg~a~~t~~~~~~f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 ----------TPVKLTSKAGT-ISGIFSKDLVTIGK-LSVP-YKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp ----------EEEEEECSSEE-EEEEEEEEEEEETT-EEEE-EEEEEEEEEEECTTHHHHSCCCEEEECSSBCSSSSCCC
T ss_pred ----------CEEEEEECCCE-EEEEEEEEEEEECC-EEEE-EEEEEEEeccccCCCccCCCCCEEEecCCCcccccCCC
Confidence 48999999998 78999999999999 5788 99999987 3 3689999999987653
Q ss_pred ------cccc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECC
Q 042725 218 ------ASQA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQG 289 (441)
Q Consensus 218 ------~~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g 289 (441)
.+|. ..+.|++||.+... ..|.|+||++|++ +|.+.+.+.+.. .+.||.|.++ |.|++
T Consensus 261 ~~~~~L~~qg~I~~~~FS~~L~~~~~-----~~G~l~fGgiD~s---~y~G~l~~~pv~-----~~~~w~v~l~-I~Vgg 326 (451)
T 3qvc_A 261 PYIVELKTQNKIEQAVYSIYLPPENK-----NKGYLTIGGIEER---FFDGPLNYEKLN-----HDLMWQVDLD-VHFGN 326 (451)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTCT-----TEEEEEESSCCGG---GEEEEEEEEECS-----STTSSEEEEE-EEETT
T ss_pred CHHHHHHHcCCCCCCEEEEEEcCCCC-----CCCEEEECCcchh---hcCCceEEEEcc-----cCCeeEEEEE-EEECC
Confidence 2232 24789999987622 4899999999986 567776654433 3469999999 99999
Q ss_pred EEeecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceE
Q 042725 290 KRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMV 369 (441)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~ 369 (441)
+ . ..++.+||||||+++++|++++++|++++. +.... ..+.+.++|+ .. .+|+|+
T Consensus 327 ~-~-----------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~----a~~~~--~~g~y~v~C~-~~------~~P~it 381 (451)
T 3qvc_A 327 V-S-----------SKKANVILDSATSVITVPTEFFNQFVESAS----VFKVP--FLSLYVTTCG-NT------KLPTLE 381 (451)
T ss_dssp E-E-----------EEEEEEEECTTBSSEEECHHHHHHHHTTTT----CEECT--TSSCEEEETT-CT------TCCCEE
T ss_pred c-c-----------CCCceEEEeCCCccccCCHHHHHHHHHHcC----CeecC--CCCeEEeeCC-cC------cCCcEE
Confidence 8 1 134569999999999999999999886653 22211 1356678998 32 589999
Q ss_pred EEEcCceEEEEcCCcEEEEeC--CCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 370 FEFERGVEILIEKERVLADVG--GGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 370 f~~~gg~~~~i~~~~y~~~~~--~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
|+| +|.++.|||++|++... ++..|+ +|...+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 382 f~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 382 YRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999 79999999999999864 346796 67765432 4579999999999999999999999999975
No 21
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.8e-53 Score=414.63 Aligned_cols=295 Identities=16% Similarity=0.181 Sum_probs=239.7
Q ss_pred cccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CC--CCCCCCCCCCCCCcccccCCCCCCCCCccCC
Q 042725 74 YRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PA--PPTTSFDPSRSSSFSVLPCTHPLCKPRIVDF 149 (441)
Q Consensus 74 ~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~--~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~ 149 (441)
..+.+..+..|+++|.|| +|+|.|+|||||+++||+|..|. .| ..|+.|||++| ||+..+
T Consensus 9 ~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------- 72 (330)
T 1yg9_A 9 KLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------- 72 (330)
T ss_dssp SCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-------------
T ss_pred eeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-------------
Confidence 344445567788999999 99999999999999999999997 68 88999999999 998854
Q ss_pred CCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC------CcceeEeecCCCCC-c-----
Q 042725 150 TLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS------EDKGILGMNLGRLS-F----- 217 (441)
Q Consensus 150 ~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~------~~~GIlGLg~~~~s-~----- 217 (441)
+.|.+.|++|+. .|.+++|+|+|++ ..++++.|||++... .++||||||++.++ .
T Consensus 73 -----------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~-~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~ 139 (330)
T 1yg9_A 73 -----------NVQVKFFDTGSA-VGRGIEDSLTISQ-LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKT 139 (330)
T ss_dssp -----------EEEEEETTTEEE-EEEEEEEEEEETT-EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCC
T ss_pred -----------CEEEEEECCceE-EEEEEEEEEEECC-EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCC
Confidence 379999999986 7999999999998 588899999998753 57999999998876 2
Q ss_pred -----ccccc-cCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEE
Q 042725 218 -----ASQAK-ISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKR 291 (441)
Q Consensus 218 -----~~q~~-~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~ 291 (441)
.+|.. .+.|++||.+.... ...|.|+||++|++ +|.+.+.+.+.. .+.||.|.+++|.|+++.
T Consensus 140 ~~~~l~~qg~i~~~FS~~l~~~~~~---~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~~i~v~~~~ 208 (330)
T 1yg9_A 140 VLENFVEENLIAPVFSIHHARFQDG---EHFGEIIFGGSDWK---YVDGEFTYVPLV-----GDDSWKFRLDGVKIGDTT 208 (330)
T ss_dssp HHHHHHHTTSSCSEEEEEEEECTTS---CEEEEEEETSCCGG---GEEEEEEEEEBS-----CTTSCCEECSEEEETTEE
T ss_pred HHHHHHhcCCCCceEEEEEcCCCCC---CCCCEEEECCcCHH---HccCceEEEECC-----CCCEEEEEeCeEEECCEE
Confidence 23311 58899999875321 13899999999986 566666654433 346999999999999987
Q ss_pred eecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccC--CC-cceeccCCcccccccccce
Q 042725 292 LDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYG--GV-ADMCFDGNAMEVGRLIGDM 368 (441)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~--~~-~~~C~~~~~~~~~~~lP~i 368 (441)
+. ..++.+||||||+++++|++++++|++++. +.... .+ .+ .++|+... .+|+|
T Consensus 209 ~~----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~----~~~~~---~g~~~~~~~~C~~~~------~~p~i 265 (330)
T 1yg9_A 209 VA----------PAGTQAIIDTSKAIIVGPKAYVNPINEAIG----CVVEK---TTTRRICKLDCSKIP------SLPDV 265 (330)
T ss_dssp EE----------CTTCEEEECTTCSSEEEEHHHHHHHHHHHT----CEEEE---CSSCEEEEECGGGGG------GSCCE
T ss_pred Ec----------CCCcEEEEecCCccccCCHHHHHHHHHHhC----CcccC---CCceEEEEEECCCcc------ccCcE
Confidence 64 235679999999999999999999987763 22211 23 45 67897643 58999
Q ss_pred EEEEcCceEEEEcCCcEEEEeCCCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 369 VFEFERGVEILIEKERVLADVGGGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 369 ~f~~~gg~~~~i~~~~y~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
+|+| +|.++.||+++|+++. +..|+ +|+... ..+.||||++|||++|+|||++|+|||||+++
T Consensus 266 ~f~f-gg~~~~l~~~~y~~~~--~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 266 TFVI-NGRNFNISSQYYIQQN--GNLCYSGFQPCG--HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEEE-TTEEEEECHHHHEEEE--TTEEEESEEEET--TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEE-CCEEEEECHHHhcccC--CCcEEEEEEeCC--CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999 7999999999999987 45796 676652 23579999999999999999999999999974
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.1e-54 Score=420.95 Aligned_cols=293 Identities=20% Similarity=0.318 Sum_probs=234.5
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCC--CCC---------CCCCCCCCCCCCCCCcccccCCCCCCCCCccCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCH--KKA---------PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDF 149 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~--~~~---------~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~ 149 (441)
+.+|+++|.||||+|+|.|+|||||+++||+|. .|. .|..++.|||++|+||+..+
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (342)
T 2qzx_A 11 AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------- 77 (342)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-------------
T ss_pred CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-------------
Confidence 567999999999999999999999999999744 443 47789999999999999865
Q ss_pred CCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCCCcceeEeecCCCC--------Cccccc
Q 042725 150 TLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTSEDKGILGMNLGRL--------SFASQA 221 (441)
Q Consensus 150 ~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~~~~GIlGLg~~~~--------s~~~q~ 221 (441)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||+......+||||||++.. +++.+|
T Consensus 78 -----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~GilGLg~~~~~~~~~~~~~~~~~L 145 (342)
T 2qzx_A 78 -----------TRFDIKYGDGSYAKGKLYKDTVGIGG-VSVRDQLFANVWSTSARKGILGIGFQSGEATEFDYDNLPISL 145 (342)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECSSSCEEECSCGGGCSSSSCCCCHHHHH
T ss_pred -----------CcEEEEeCCCCeEEEEEEEEEEEECC-EEecceEEEEEEecCCCcCEEEEccccccCCCccCccHHHHH
Confidence 48999999998888999999999998 5888999999998889999999999764 333333
Q ss_pred ----c--cCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecC
Q 042725 222 ----K--ISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIP 295 (441)
Q Consensus 222 ----~--~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~ 295 (441)
. .+.|++||.+.. ...|.|+||+.|++ +|.+.+.+.+.. ...+|.|.+++|+|+++.+..
T Consensus 146 ~~qg~i~~~~Fs~~l~~~~-----~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~~~- 211 (342)
T 2qzx_A 146 RNQGIIGKAAYSLYLNSAE-----ASTGQIIFGGIDKA---KYSGSLVDLPIT-----SEKKLTVGLRSVNVRGRNVDA- 211 (342)
T ss_dssp HHTTSSSSSEEEEECCCTT-----CSEEEEEETEEETT---SBSSCCEEEECC-----CSSSCEEEEEEEEETTEEEEE-
T ss_pred HHCCCcCccEEEEEeCCCC-----CCCeEEEECccchh---hEecceEEEecc-----CCceEEEEEeEEEECCEecCC-
Confidence 2 378999997642 14899999999876 345554443322 234999999999999988752
Q ss_pred CCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCc
Q 042725 296 ATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERG 375 (441)
Q Consensus 296 ~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg 375 (441)
+..+||||||+++++|++++++|++++.+.... ... ..+.+.++|+. +|+|+|+|.+|
T Consensus 212 ----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~--~~~-~~~~~~~~C~~---------~p~i~f~f~~g 269 (342)
T 2qzx_A 212 ----------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF--DSA-GNKVYVADCKT---------SGTIDFQFGNN 269 (342)
T ss_dssp ----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE--CTT-SCEEEEECTTC---------CCEEEEEETTT
T ss_pred ----------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee--ccC-CCcEEEEECCC---------CCcEEEEECCC
Confidence 246999999999999999999998776443211 010 01245578864 67999999668
Q ss_pred eEEEEcCCcEEEEeC-----CCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 376 VEILIEKERVLADVG-----GGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 376 ~~~~i~~~~y~~~~~-----~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
.++.||+++|+++.. ++..|++ |... +.||||++|||++|+|||++++|||||+++|++
T Consensus 270 ~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 270 LKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp EEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred cEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 999999999998742 2357974 5543 249999999999999999999999999999975
No 23
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5.3e-53 Score=428.70 Aligned_cols=316 Identities=21% Similarity=0.322 Sum_probs=242.9
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNR 159 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~ 159 (441)
.+..|+++|+||||||+|+|+|||||+++||+|..| |..++.||+++|+||+..+
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~~~y~~~~SsT~~~~~----------------------- 126 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRDLR----------------------- 126 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEEEE-----------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccCCcccCCCCCCcccCC-----------------------
Confidence 345799999999999999999999999999999988 8889999999999999865
Q ss_pred CcEEeEEeCCCceEEeeEEEEEEeeCCCcccC-CeEEEeeeCC-------CCcceeEeecCCCCCcc------------c
Q 042725 160 LCHYSYFYADGTFAEGNLVKEKFTFSAAQSTL-PLILGCAKDT-------SEDKGILGMNLGRLSFA------------S 219 (441)
Q Consensus 160 ~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~-~~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------~ 219 (441)
|.|.+.|++|+. .|.+++|+|+|++...+. .+.|+++... ..++||||||++.++.. .
T Consensus 127 -~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 204 (455)
T 3lpj_A 127 -KGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 204 (455)
T ss_dssp -EEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred -ccEEEEeCCeEE-EEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHH
Confidence 489999999986 799999999998532222 3567777643 35799999999876532 2
Q ss_pred cccc-CceeEecCCCCCCCC-----cCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEee
Q 042725 220 QAKI-SKFSYCVPTRVSRVG-----YTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLD 293 (441)
Q Consensus 220 q~~~-~~Fs~~l~~~~~~~~-----~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~ 293 (441)
|..+ +.|++||.+...... ....|.|+||++|++ +|.+.+.+.+.. .+.||.|.+++|.|+++.+.
T Consensus 205 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~~i~v~g~~~~ 276 (455)
T 3lpj_A 205 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHS---LYTGSLWYTPIR-----REWYYEVIIVRVEINGQDLK 276 (455)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGG---GEEEEEEEEECC-----SBTTBBCCEEEEEETTEECC
T ss_pred ccCCCceeEEEeccccccccccccccCCCceEEECCcCcc---cccCceEEEecC-----CCceeEEEEeEEEECCEEcc
Confidence 3333 599999975421100 124899999999986 577777654433 24699999999999999887
Q ss_pred cCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCC-cccccccCCCcceeccCCcccccccccceEEEE
Q 042725 294 IPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPR-MKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEF 372 (441)
Q Consensus 294 ~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~ 372 (441)
++...+ +++.+||||||+++++|.+++++|+++|.+..... ....+ ...+.++|+....... ..+|+|+|+|
T Consensus 277 ~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~-~~g~~~~C~~~~~~~~-~~~P~i~f~f 349 (455)
T 3lpj_A 277 MDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTPW-NIFPVISLYL 349 (455)
T ss_dssp CCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHH-HTTCSCEEESTTCCCG-GGSCCEEEEE
T ss_pred cccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCccc-ccCcceecccccCCch-hcCCcEEEEE
Confidence 543322 24679999999999999999999999998875421 11111 1234689998653222 2489999999
Q ss_pred cCce-----EEEEcCCcEEEEeCCC----eEEEEEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 373 ERGV-----EILIEKERVLADVGGG----VHCVGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 373 ~gg~-----~~~i~~~~y~~~~~~~----~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
.|+. +|.|+|++|+++.... ..|+++.... ..+.||||++|||++|+|||++++|||||+++|+.
T Consensus 350 ~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~--~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 350 MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp ECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE--ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred cCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 5432 5999999999986532 4798642221 13469999999999999999999999999999965
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.5e-53 Score=428.49 Aligned_cols=294 Identities=20% Similarity=0.267 Sum_probs=238.8
Q ss_pred cccccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCC
Q 042725 74 YRSKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTL 151 (441)
Q Consensus 74 ~~~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~ 151 (441)
.++.+..+.+|+++|+||||||++.|+|||||++|||+|..|. .|..++.|||++|+||+..+
T Consensus 130 ~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~--------------- 194 (453)
T 2bju_A 130 IELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG--------------- 194 (453)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE---------------
T ss_pred eeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC---------------
Confidence 3444455778999999999999999999999999999999997 78899999999999999865
Q ss_pred CCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC---------CcceeEeecCCCCCcc----
Q 042725 152 PTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS---------EDKGILGMNLGRLSFA---- 218 (441)
Q Consensus 152 ~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~---------~~~GIlGLg~~~~s~~---- 218 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++ +.|||+.... .++||||||++.++..
T Consensus 195 ---------~~~~i~YgdGs-~~G~~~~Dtv~ig~-~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 262 (453)
T 2bju_A 195 ---------TKVEMNYVSGT-VSGFFSKDLVTVGN-LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDP 262 (453)
T ss_dssp ---------EEEEEECSSSE-EEEEEEEEEEEETT-EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCC
T ss_pred ---------cEEEEEcCCCC-eEEEEEEEEEEEeC-cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCc
Confidence 48999999998 57999999999998 5788 9999998764 5899999999876543
Q ss_pred ------cc--cccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCE
Q 042725 219 ------SQ--AKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGK 290 (441)
Q Consensus 219 ------~q--~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~ 290 (441)
+| +..+.|++||.+.. ...|.|+||+.|++ +|.+.+.+.+.. .+.||.|.++ |+|+++
T Consensus 263 ~~~~L~~qg~i~~~~FS~~L~~~~-----~~~G~l~fGg~D~~---~y~G~l~~~pv~-----~~~~w~V~l~-I~Vgg~ 328 (453)
T 2bju_A 263 IVVELKNQNKIENALFTFYLPVHD-----KHTGFLTIGGIEER---FYEGPLTYEKLN-----HDLYWQITLD-AHVGNI 328 (453)
T ss_dssp HHHHHHHTTSSSSCEEEEECCBTT-----TBCEEEEESSCCGG---GEEEEEEEEEEE-----EETTEEEEEE-EEETTE
T ss_pred HHHHHHHCCCCCCCEEEEEeCCCC-----CCCeEEEECCCCHH---HcCCceEEEecC-----CCceEEEEEE-EEECcE
Confidence 23 22489999998752 24899999999976 455555443322 2359999999 999993
Q ss_pred EeecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccC-CCcceeccCCcccccccccceE
Q 042725 291 RLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYG-GVADMCFDGNAMEVGRLIGDMV 369 (441)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~lP~i~ 369 (441)
+. .++.+||||||+++++|++++++|.+++ ++... ..| .+.++|+. . .+|+|+
T Consensus 329 -~~-----------~~~~aIiDSGTsl~~lP~~~~~~l~~~i----~~~~~---~~g~~~~v~C~~-~------~~P~it 382 (453)
T 2bju_A 329 -ML-----------EKANCIVDSGTSAITVPTDFLNKMLQNL----DVIKV---PFLPFYVTLCNN-S------KLPTFE 382 (453)
T ss_dssp -EE-----------EEEEEEECTTCCSEEECHHHHHHHTTTS----SCEEC---TTSSCEEEETTC-T------TCCCEE
T ss_pred -Ee-----------ccccEEEcCCCCeEecCHHHHHHHHHHh----CCccc---CCCceEEEecCC-C------CCCcEE
Confidence 31 2456999999999999999999988555 32211 123 56789986 2 589999
Q ss_pred EEEcCceEEEEcCCcEEEEeC--CCeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 370 FEFERGVEILIEKERVLADVG--GGVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 370 f~~~gg~~~~i~~~~y~~~~~--~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
|+| +|.++.|||++|+++.. ++..|+ +|+..+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 383 f~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 383 FTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999 79999999999999875 345896 6876653 23589999999999999999999999999976
No 25
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=9.4e-53 Score=408.39 Aligned_cols=288 Identities=20% Similarity=0.315 Sum_probs=234.7
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQ 157 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~ 157 (441)
.+.+|+++|.|| ||+|.|+|||||+++||+|..|. .|..++.|||++|+ ++..+
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~--------------------- 68 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG--------------------- 68 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE---------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC---------------------
Confidence 366799999999 89999999999999999999998 67889999999998 65322
Q ss_pred CCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCCcc------------
Q 042725 158 NRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLSFA------------ 218 (441)
Q Consensus 158 ~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------ 218 (441)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++.. ..++||||||++.++..
T Consensus 69 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 69 ---ATWSISYGDGSSASGDVYKDKVTVGG-VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred ---CeEEEEcCCCCeEEEEEEEEEEEECC-EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 58999999998778999999999998 58889999999875 36899999999876542
Q ss_pred -cccccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCC
Q 042725 219 -SQAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPAT 297 (441)
Q Consensus 219 -~q~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~ 297 (441)
+|+..+.|++||.+. ..|.|+||++|++ +|.+.+.+.+... .+.||.|.+++|+|++ .+.
T Consensus 145 ~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 145 KSSLSEPIFAVALKHN-------APGVYDFGYTDSS---KYTGSITYTDVDN----SQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp GGGSSSSEEEEECCTT-------SCEEEEESSCCTT---SEEEEEEEEECBC----TTSSCEEEESEEEETT-EEE----
T ss_pred HHhccCcEEEEEccCC-------CCCEEEECCcCcc---ccccceEEEECCC----CCceEEEEECeEEECC-ccc----
Confidence 344568999999753 3899999999986 4666666554432 2459999999999999 543
Q ss_pred ccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceE
Q 042725 298 AFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVE 377 (441)
Q Consensus 298 ~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~ 377 (441)
..++.+||||||+++++|++++++|++++.+ +.... ..+.+.++|+. .+|+|+|+| +|.+
T Consensus 206 ------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~--~~g~~~~~C~~--------~~P~i~f~f-gg~~ 265 (323)
T 1izd_A 206 ------SDSITGIADTGTTLLLLDDSIVDAYYEQVNG---ASYDS--SQGGYVFPSSA--------SLPDFSVTI-GDYT 265 (323)
T ss_dssp ------CCCEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEET--TTTEEEEETTC--------CCCCEEEEE-TTEE
T ss_pred ------CCCceEEEeCCCcceeCCHHHHHHHHHhCCC---cEEcC--cCCEEEEECCC--------CCceEEEEE-CCEE
Confidence 2356799999999999999999998866532 22111 12445678973 489999999 7999
Q ss_pred EEEcCCcEEEEeCCCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 378 ILIEKERVLADVGGGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 378 ~~i~~~~y~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
+.||+++|+++..++..|++ |...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 266 ~~i~~~~~~~~~~~~~~C~~~i~~~~--~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 266 ATVPGEYISFADVGNGQTFGGIQSNS--GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEECHHHHEEEECSTTEEEESEEECT--TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecCHHHeEEecCCCCeEEEEEEcCC--CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 99999999988755568975 76654 23579999999999999999999999999864
No 26
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.1e-53 Score=418.93 Aligned_cols=294 Identities=21% Similarity=0.354 Sum_probs=233.3
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEe-----CCCC------CCCCCCCCCCCCCCCCcccccCCCCCCCCCccCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIK-----CHKK------APAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDF 149 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~-----c~~~------~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~ 149 (441)
+.+|+++|.||||||+|.|+|||||+++||+ |.+| ..|..++.||+++|+||+..+
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (342)
T 3pvk_A 11 QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------- 77 (342)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE-------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC-------------
Confidence 4679999999999999999999999999997 5433 167789999999999999865
Q ss_pred CCCCCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCCCcceeEeecCCCC-------Cccccc-
Q 042725 150 TLPTDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTSEDKGILGMNLGRL-------SFASQA- 221 (441)
Q Consensus 150 ~~~~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~~~~GIlGLg~~~~-------s~~~q~- 221 (441)
|.|.+.|++|+.+.|.++.|+|+|++ ..++++.||++......+||||||++.. +++.+|
T Consensus 78 -----------~~~~i~Yg~gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~GilGLg~~~~~~~~~~~~~~~~L~ 145 (342)
T 3pvk_A 78 -----------TPFKIGYGDGSSSQGTLYKDTVGFGG-VSIKNQVLADVDSTSIDQGILGVGYKTNEAGGSYDNVPVTLK 145 (342)
T ss_dssp -----------EEEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEESSSSCEEECSCGGGCSSCSSCCHHHHHH
T ss_pred -----------CeEEEEecCCCeEEEEEEEEEEEECC-EEecceEEEEEEccCCCccEEEecCccccccccCCcHHHHHH
Confidence 48999999998788999999999999 6889999999998889999999999864 333333
Q ss_pred ---c--cCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCC
Q 042725 222 ---K--ISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPA 296 (441)
Q Consensus 222 ---~--~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~ 296 (441)
. .+.|++||.+... ..|.|+||++|++ +|.+.+.+.+.. .+.+|.|.+++|.|+++.+..+
T Consensus 146 ~qg~i~~~~fs~~l~~~~~-----~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~~~~- 211 (342)
T 3pvk_A 146 KQGVIAKNAYSLYLNSPDA-----ATGQIIFGGVDNA---KYSGSLIALPVT-----SDRELRISLGSVEVSGKTINTD- 211 (342)
T ss_dssp HTTSSSSSEEEEECCCTTC-----SEEEEEETEEETT---SBSSCCEEEECC-----CSSSCEEEEEEEEETTEEEEEE-
T ss_pred hcCCCCCceEEEEeCCCCC-----CCcEEEECccCcc---ceeeeeEEeecC-----ccceEEEEEeEEEECCEEecCC-
Confidence 2 3689999976421 4899999999876 355554443322 2349999999999999987632
Q ss_pred CccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCce
Q 042725 297 TAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGV 376 (441)
Q Consensus 297 ~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~ 376 (441)
+..+||||||+++++|++++++|++++.+...... .+ .+.+.++|+. +|+|+|+|.+|.
T Consensus 212 ---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~--~~~~~~~C~~---------~p~i~f~f~~g~ 270 (342)
T 3pvk_A 212 ---------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS-NG--NSFYEVDCNL---------SGDVVFNFSKNA 270 (342)
T ss_dssp ---------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT-TS--CEEEEECSCC---------CSEEEEEESTTC
T ss_pred ---------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC-CC--ceEEEEecCC---------CCceEEEECCCC
Confidence 34699999999999999999999866643321110 00 1125678874 479999996589
Q ss_pred EEEEcCCcEEEEeC--C---CeEEE-EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 377 EILIEKERVLADVG--G---GVHCV-GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 377 ~~~i~~~~y~~~~~--~---~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
++.||+++|+++.. . ...|+ ++... +.||||++|||++|+|||++++|||||+++|++
T Consensus 271 ~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 271 KISVPASEFAASLQGDDGQPYDKCQLLFDVN-----DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EEEEEGGGGEEC----------CEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEEEcHHHheeeccccCCCcCCeeEEEEeeC-----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 99999999998631 2 25796 56553 369999999999999999999999999999974
No 27
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=8.9e-52 Score=413.78 Aligned_cols=315 Identities=21% Similarity=0.319 Sum_probs=238.4
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNRL 160 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~~ 160 (441)
+..|+++|.||||||+|+|+|||||+++||+|..| |..++.|||++|+||+..+
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~~~y~~~~SsT~~~~~------------------------ 80 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRDLR------------------------ 80 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEEEE------------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--CcccCCcCcccCcccccCC------------------------
Confidence 35799999999999999999999999999999988 8889999999999999865
Q ss_pred cEEeEEeCCCceEEeeEEEEEEeeCCCcccCC-eEEEeeeCC-------CCcceeEeecCCCCCcc------------cc
Q 042725 161 CHYSYFYADGTFAEGNLVKEKFTFSAAQSTLP-LILGCAKDT-------SEDKGILGMNLGRLSFA------------SQ 220 (441)
Q Consensus 161 ~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~-~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------~q 220 (441)
|.|.+.|++|+. .|.+++|+|+|++...+.. +.|+++... ..++||||||++.++.. .|
T Consensus 81 ~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 159 (402)
T 3vf3_A 81 KGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 159 (402)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred CEEEEEECcEEE-EEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHc
Confidence 489999999985 7999999999985333332 346766542 35799999999876542 23
Q ss_pred ccc-CceeEecCCCCCCC-----CcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeec
Q 042725 221 AKI-SKFSYCVPTRVSRV-----GYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDI 294 (441)
Q Consensus 221 ~~~-~~Fs~~l~~~~~~~-----~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~ 294 (441)
..+ +.|++||....... .....|.|+||++|++ +|.+.+.+.+.. .+.||.|.+++|.|+++.+.+
T Consensus 160 ~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~w~v~l~~i~v~g~~~~~ 231 (402)
T 3vf3_A 160 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHS---LYTGSLWYTPIR-----REWYYEVIIVRVEINGQDLKM 231 (402)
T ss_dssp SCCCSCEEEEECCCC-------------EEEEESSCCGG---GEEEEEEEEECS-----SBTTBEECEEEEEETTEECCC
T ss_pred cCCccceEEEeecccccccccccccCCCCEEEeCCcCcc---cccCceEEEeCC-----cCcEEEEEEeEEEECCEEecc
Confidence 333 68999997531100 0124899999999986 577776654432 245999999999999998875
Q ss_pred CCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCC-cccccccCCCcceeccCCcccccccccceEEEEc
Q 042725 295 PATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPR-MKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFE 373 (441)
Q Consensus 295 ~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~ 373 (441)
+...+ +.+.+||||||+++++|.+++++|++++.+..... ....+ ...+.++|+....... ..+|+|+|+|.
T Consensus 232 ~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~-~~~P~i~f~f~ 304 (402)
T 3vf3_A 232 DCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTPW-NIFPVISLYLM 304 (402)
T ss_dssp CGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTG-GGTCSCEEEETTCCCG-GGSCCEEEEEE
T ss_pred ccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccc-cccccccccccccchH-hhCCceEEEEe
Confidence 43322 24579999999999999999999999998875421 11111 1234689987653222 25899999995
Q ss_pred Cce-----EEEEcCCcEEEEeCCC----eEEEEEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 374 RGV-----EILIEKERVLADVGGG----VHCVGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 374 gg~-----~~~i~~~~y~~~~~~~----~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
++. ++.|+|++|+++.... ..|+++.... ..+.||||++|||++|+|||++++|||||+++|++
T Consensus 305 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~--~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 305 GEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp CSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE--ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred cCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 432 6999999999986432 4897532211 12469999999999999999999999999999985
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.7e-52 Score=413.62 Aligned_cols=315 Identities=21% Similarity=0.326 Sum_probs=238.6
Q ss_pred ceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCC
Q 042725 79 KYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQN 158 (441)
Q Consensus 79 ~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~ 158 (441)
..+..|+++|.||||+|+|.|+|||||++|||+|..| |..++.||+++|+||+..+
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c--~~~~~~y~~~~SsT~~~~~---------------------- 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRDLR---------------------- 73 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEEEE----------------------
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCC--ccccCCcCcccCCCceeCC----------------------
Confidence 3456799999999999999999999999999999988 4568899999999999865
Q ss_pred CCcEEeEEeCCCceEEeeEEEEEEeeCCCcccC-CeEEEeeeCC-------CCcceeEeecCCCCCc------------c
Q 042725 159 RLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTL-PLILGCAKDT-------SEDKGILGMNLGRLSF------------A 218 (441)
Q Consensus 159 ~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~-~~~fg~~~~~-------~~~~GIlGLg~~~~s~------------~ 218 (441)
|.|.+.|++|+. .|.+++|+|+|++...+. .+.|++.... ..++||||||++.++. .
T Consensus 74 --~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~ 150 (395)
T 2qp8_A 74 --KGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 150 (395)
T ss_dssp --EEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ceEEEEECCcEE-EEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHH
Confidence 489999999986 699999999998322332 3557766532 3579999999987643 3
Q ss_pred ccccc-CceeEecCCCCCCC-----CcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEe
Q 042725 219 SQAKI-SKFSYCVPTRVSRV-----GYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRL 292 (441)
Q Consensus 219 ~q~~~-~~Fs~~l~~~~~~~-----~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~ 292 (441)
+|..+ +.|++||.+..... .....|.|+||++|++ +|.+.+.+.+.. .+.||.|.+++|+|+++.+
T Consensus 151 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~ 222 (395)
T 2qp8_A 151 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHS---LYTGSLWYTPIR-----REWYYEVIIVRVEINGQDL 222 (395)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGG---GEEEEEEEEECC-----SBTTBBCCEEEEEETTEEC
T ss_pred HccCCcceEEEEeccccccccccccccCCCcEEEECCcCcc---cccCceEEeccC-----CCceEEEEEEEEEECCEEc
Confidence 34333 68999997531100 0124899999999876 566666554332 2359999999999999988
Q ss_pred ecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCc-ccccccCCCcceeccCCcccccccccceEEE
Q 042725 293 DIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRM-KKGYVYGGVADMCFDGNAMEVGRLIGDMVFE 371 (441)
Q Consensus 293 ~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~ 371 (441)
.++...+ ....+||||||+++++|++++++|++++.+...... ..++ ...+.++|+...... ...+|+|+|+
T Consensus 223 ~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~-~~~~P~i~f~ 295 (395)
T 2qp8_A 223 KMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTP-WNIFPVISLY 295 (395)
T ss_dssp CCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHH-HTTCSCEEESTTCCC-GGGSCCEEEE
T ss_pred ccCcccc-----CCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccc-cccccccccccccch-HhhCCcEEEE
Confidence 6544332 235799999999999999999999999987754321 1111 112357998764322 1258999999
Q ss_pred EcCce-----EEEEcCCcEEEEeCC----CeEEE--EEEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 372 FERGV-----EILIEKERVLADVGG----GVHCV--GIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 372 ~~gg~-----~~~i~~~~y~~~~~~----~~~C~--~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
|.|+. ++.|+|++|++.... ...|+ ++... .+.||||++|||++|+|||++++|||||+++|..
T Consensus 296 f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 296 LMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 96442 799999999987642 34896 45542 2469999999999999999999999999999974
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3e-52 Score=414.73 Aligned_cols=314 Identities=22% Similarity=0.326 Sum_probs=234.7
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCC
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNR 159 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~ 159 (441)
.+..|+++|.||||+|+|.|+|||||+++||+|..|. ..++.|||++|+||+..+
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~~~~~f~~~~SsT~~~~~----------------------- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--YIDTYFDTERSSTYRSKG----------------------- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--TBSCCCCGGGCTTCEEEE-----------------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--ccccCcccccCccceeCC-----------------------
Confidence 3557999999999999999999999999999999883 457899999999999865
Q ss_pred CcEEeEEeCCCceEEeeEEEEEEeeCCCcccC-CeEEEeeeCC-------CCcceeEeecCCCCCc------------cc
Q 042725 160 LCHYSYFYADGTFAEGNLVKEKFTFSAAQSTL-PLILGCAKDT-------SEDKGILGMNLGRLSF------------AS 219 (441)
Q Consensus 160 ~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~-~~~fg~~~~~-------~~~~GIlGLg~~~~s~------------~~ 219 (441)
|.|.+.|++|+. .|.+++|+|+|++..... .+.|++.... ..++||||||++.++. ..
T Consensus 66 -~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~ 143 (383)
T 2ewy_A 66 -FDVTVKYTQGSW-TGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVT 143 (383)
T ss_dssp -EEEEEECSSCEE-EEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred -ceEEEEECCcEE-EEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHH
Confidence 479999999985 699999999998632221 3567776432 3579999999987643 33
Q ss_pred cccc-CceeEecCCCCC--CCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCC
Q 042725 220 QAKI-SKFSYCVPTRVS--RVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPA 296 (441)
Q Consensus 220 q~~~-~~Fs~~l~~~~~--~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~ 296 (441)
|..+ +.|++||..... .......|.|+||++|++ +|.+.+.+.+.. ...||+|.+++|+|+++.+.++.
T Consensus 144 q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~g~~~~~~~ 215 (383)
T 2ewy_A 144 QANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPS---LYKGDIWYTPIK-----EEWYYQIEILKLEIGGQSLNLDC 215 (383)
T ss_dssp HHTCCSCEEEEECCC---------CCEEEEETSCCGG---GCCSCEEEEECS-----SBTTBBCCEEEEEETTEECCCCT
T ss_pred ccCCCcceEEEeeccccccccCCCCCeEEEeCccchh---hccCccEEEecC-----CCceEEEEEEEEEECCEEccccc
Confidence 4444 689999864210 000124899999999875 344544443322 23599999999999999887554
Q ss_pred CccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCc-ccccccCCCcceeccCCcccccccccceEEEEcCc
Q 042725 297 TAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRM-KKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERG 375 (441)
Q Consensus 297 ~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg 375 (441)
..+ ....+||||||+++++|++++++|++++.+...... ..++ ...+.++|+....... ..+|+|+|+|.|+
T Consensus 216 ~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~-~~~P~i~f~f~g~ 288 (383)
T 2ewy_A 216 REY-----NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGF-WTGSQLACWTNSETPW-SYFPKISIYLRDE 288 (383)
T ss_dssp TTT-----TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHH-HHTSEEEEECSSSCGG-GGSCCEEEEEECS
T ss_pred ccc-----CCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCcccc-ccccccccccCCcccH-hhCCcEEEEECCC
Confidence 332 245799999999999999999999999977653211 1111 0134579987643221 2589999999643
Q ss_pred -----eEEEEcCCcEEEEeC---CCeEEEE--EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 376 -----VEILIEKERVLADVG---GGVHCVG--IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 376 -----~~~~i~~~~y~~~~~---~~~~C~~--i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
.++.|+|++|+.+.. ++..|++ +... .+.||||++|||++|+|||++|+|||||+++|..
T Consensus 289 ~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 289 NSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp STTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred CCCceEEEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 379999999998763 3457975 4432 2469999999999999999999999999999963
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-52 Score=404.50 Aligned_cols=288 Identities=19% Similarity=0.320 Sum_probs=231.2
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQN 158 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~ 158 (441)
+.+|+++|.|| +|+|.|+|||||++|||+|..|. .|..++.|||++|+ ++..
T Consensus 13 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~----------------------- 66 (325)
T 1ibq_A 13 DEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLS----------------------- 66 (325)
T ss_dssp TSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECT-----------------------
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccC-----------------------
Confidence 56789999999 99999999999999999999998 67889999999998 5431
Q ss_pred CCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCCcc-------------
Q 042725 159 RLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLSFA------------- 218 (441)
Q Consensus 159 ~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------- 218 (441)
.|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||+... ..++||||||++.++..
T Consensus 67 -~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 144 (325)
T 1ibq_A 67 -GYSWDISYGDGSSASGDVYRDTVTVGG-VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVK 144 (325)
T ss_dssp -TCBEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred -CCEEEEEeCCCCEEEEEEEEeEEEECC-EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHH
Confidence 248999999998778999999999998 58899999999874 36899999999876542
Q ss_pred cccccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCc
Q 042725 219 SQAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATA 298 (441)
Q Consensus 219 ~q~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~ 298 (441)
+|+..+.|++||.+. ..|.|+||+.|++ +|.+.+.+.+... .+.||.|.+++|+|+++.+.
T Consensus 145 ~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~w~v~l~~i~v~~~~~~----- 205 (325)
T 1ibq_A 145 SQLDSPLFAVQLKHD-------APGVYDFGYIDDS---KYTGSITYTDADS----SQGYWGFSTDGYSIGDGSSS----- 205 (325)
T ss_dssp GGSSSSEEEEEEETT-------EEEEEEESSCCGG---GBSSCCEEEECBC----TTSSCEEEECEEEETTSCCB-----
T ss_pred HhcCCcEEEEEecCC-------CCceEEECCcChh---hccCceEEEEcCC----CCceEEEEECcEEECCeecc-----
Confidence 334458999999752 3899999999975 3444444433221 24599999999999997553
Q ss_pred cccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEE
Q 042725 299 FHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEI 378 (441)
Q Consensus 299 ~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~ 378 (441)
..++.+||||||+++++|++++++|++++.+ +.... ..+.+.++|+. .+|+|+|+| +|.++
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~---a~~~~--~~g~~~~~C~~--------~~P~i~f~f-gg~~~ 266 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVSG---AQESY--EAGGYVFSCST--------DLPDFTVVI-GDYKA 266 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTSTT---CBCCS--SSSSCEEETTC--------CCCCEEEEE-TTEEE
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCCC---ceEcC--cCCeEEEEcCC--------CCCcEEEEE-CCEEE
Confidence 2356799999999999999999998866532 22211 12456689973 489999999 79999
Q ss_pred EEcCCcEEEEeC--CCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 379 LIEKERVLADVG--GGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 379 ~i~~~~y~~~~~--~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
.||+++|++... +...|++ |+... ..+.||||++|||++|+|||++|+|||||+++
T Consensus 267 ~i~~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 267 VVPGKYINYAPVSTGSSTCYGGIQSNS--GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EECHHHHEEEESSTTCSEEEESEEECT--TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhcccccCCCCCeEEEEEEcCC--CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 999999998763 3368975 66543 23579999999999999999999999999874
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.5e-52 Score=404.47 Aligned_cols=286 Identities=19% Similarity=0.324 Sum_probs=229.8
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA--PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQN 158 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~--~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~ 158 (441)
+.+|+++|+|| ||+|.|+|||||+++||+|..|. .|..++.|||++|+ ++..+
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~---------------------- 68 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG---------------------- 68 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE----------------------
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC----------------------
Confidence 56799999999 99999999999999999999998 67889999999998 65422
Q ss_pred CCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCCcc-------------
Q 042725 159 RLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLSFA------------- 218 (441)
Q Consensus 159 ~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s~~------------- 218 (441)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++.. ..++||||||++.++..
T Consensus 69 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 145 (323)
T 1bxo_A 69 --YTWSISYGDGSSASGNVFTDSVTVGG-VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVK 145 (323)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred --CeEEEEeCCCCeEEEEEEEEEEEECC-EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHH
Confidence 58999999998778999999999998 58889999999874 36799999999876542
Q ss_pred cccccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCc
Q 042725 219 SQAKISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATA 298 (441)
Q Consensus 219 ~q~~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~ 298 (441)
+|+..+.|++||.+. ..|.|+||++|++ +|.+.+.+.+... .+.||.|.+++|+|++ +.
T Consensus 146 ~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~---~~~g~l~~~p~~~----~~~~w~v~l~~i~v~~--~~----- 204 (323)
T 1bxo_A 146 SSLAQPLFAVALKHQ-------QPGVYDFGFIDSS---KYTGSLTYTGVDN----SQGFWSFNVDSYTAGS--QS----- 204 (323)
T ss_dssp GGBSSSEEEEECCSS-------SCEEEEESSCCGG---GBSSCCEEEECBC----TTSSCEEEEEEEEETT--EE-----
T ss_pred HhcCCcEEEEEEeCC-------CCceEEEeCcChh---hccCceEEEECCC----CCCeEEEEEeeEEECC--cc-----
Confidence 344458999999752 3899999999975 3444444433321 2459999999999998 21
Q ss_pred cccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEE
Q 042725 299 FHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEI 378 (441)
Q Consensus 299 ~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~ 378 (441)
..++.+||||||+++++|++++++|+++|.+ +.... ..+.+.++|+. .+|+|+|+| +|.++
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~---a~~~~--~~g~~~~~C~~--------~~P~i~f~f-gg~~~ 265 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVSG---AQQDS--NAGGYVFDCST--------NLPDFSVSI-SGYTA 265 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTSTT---CEEET--TTTEEEECTTC--------CCCCEEEEE-TTEEE
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCCC---ceEcC--cCCEEEEECCC--------CCceEEEEE-CCEEE
Confidence 1345799999999999999999998866532 22111 12345678973 489999999 79999
Q ss_pred EEcCCcEEEEeC-CCeEEEE-EEecCCCCCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 379 LIEKERVLADVG-GGVHCVG-IGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 379 ~i~~~~y~~~~~-~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
.||+++|+++.. ++..|++ |+..+. .+.||||++|||++|+|||++|+|||||+++
T Consensus 266 ~l~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 266 TVPGSLINYGPSGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECHHHHEEEECSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHeEEeccCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 999999998764 3367975 766542 3579999999999999999999999999874
No 32
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.4e-51 Score=409.01 Aligned_cols=317 Identities=18% Similarity=0.417 Sum_probs=232.9
Q ss_pred eeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCC---
Q 042725 80 YSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCD--- 156 (441)
Q Consensus 80 ~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~--- 156 (441)
.+.+|+++|.|||| |+|||||++|||+|..|. +|+.+.|.++.|....+. .+..|.
T Consensus 12 ~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~--------------~~~~~~C~s~~C~~~~~~--~~~sc~~~~ 70 (381)
T 1t6e_X 12 ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ--------------PPAEIPCSSPTCLLANAY--PAPGCPAPS 70 (381)
T ss_dssp TTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC--------------CCCCCBTTSHHHHHHHSS--CCTTCCCCC
T ss_pred CCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC--------------CCCccCCCCchhccccCC--CCCCCCCcc
Confidence 36789999999997 999999999999997651 244455555555421110 011232
Q ss_pred -----CCCCc-EEeEEeCCCceEEeeEEEEEEeeCC---CcccCCe----EEEeeeCC------CCcceeEeecCCCCCc
Q 042725 157 -----QNRLC-HYSYFYADGTFAEGNLVKEKFTFSA---AQSTLPL----ILGCAKDT------SEDKGILGMNLGRLSF 217 (441)
Q Consensus 157 -----~~~~~-~~~~~Yg~g~~~~G~~~~D~v~~g~---~~~~~~~----~fg~~~~~------~~~~GIlGLg~~~~s~ 217 (441)
.++.| .|.+.|++|+.+.|.+++|+|+|++ ...++++ .|||+... ..++||||||++.+++
T Consensus 71 ~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s~ 150 (381)
T 1t6e_X 71 CGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLAL 150 (381)
T ss_dssp C------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSH
T ss_pred CCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEEeCCCcchh
Confidence 12456 5999999999878999999999984 1344454 57999764 3689999999999999
Q ss_pred ccccc-----cCceeEecCCCCCCCCcCCccceeeCCCCCC-----CCcceeeeeecCCCCCCCCCCCceeEEeeeeEEE
Q 042725 218 ASQAK-----ISKFSYCVPTRVSRVGYTPTGSFYLGENPNS-----AGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRI 287 (441)
Q Consensus 218 ~~q~~-----~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v 287 (441)
+.|+. .++|++||.+. ..|.|+||+.+.. +.+.|+|++..+. ..+|.|.|++|+|
T Consensus 151 ~~ql~~~~~~~~~FS~~L~~~-------~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~--------~~~y~v~l~~i~v 215 (381)
T 1t6e_X 151 PAQVASAQKVANRFLLCLPTG-------GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG--------SPAHYISARSIVV 215 (381)
T ss_dssp HHHHHHHHTCCSEEEEECCSS-------SCEEEEESCCSCSCHHHHTTCCEEECBCCTT--------CCSCEECEEEEEE
T ss_pred HHHHhhhcccCceEEEEeCCC-------CCeeEEeCCcccccccccCcceeeccccCCC--------CcceEEEEEEEEE
Confidence 88875 37999999764 3899999997642 3456666654211 1256699999999
Q ss_pred CCEEeecCCCccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCC------CcccccccCCCcceeccCCccc-
Q 042725 288 QGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGP------RMKKGYVYGGVADMCFDGNAME- 360 (441)
Q Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~------~~~~~~~~~~~~~~C~~~~~~~- 360 (441)
+++.+.++...+. ++.+||||||+++++|+++|++|.+++.+++.. ...+......+..+|+..++..
T Consensus 216 g~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 216 GDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN 290 (381)
T ss_dssp TTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE
T ss_pred cCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc
Confidence 9998876554332 457999999999999999999999999876631 1111100123457898765322
Q ss_pred --ccccccceEEEEcCceEEEEcCCcEEEEeCCCeEEEEEEecCCC-----CCceeeechhhhcceEEEEECCCCEEEEe
Q 042725 361 --VGRLIGDMVFEFERGVEILIEKERVLADVGGGVHCVGIGRSEML-----GLASNIFGNFHQQNLWVEFDLASRRVGFA 433 (441)
Q Consensus 361 --~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~~~~C~~i~~~~~~-----~~~~~iLG~~fl~~~y~vfD~~~~riGfA 433 (441)
....+|+|+|+|.||.+|.|++++|+++..++..|++|+..... ..+.||||+.|||++|+|||++|+|||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 11258999999965799999999999987666789998876531 12579999999999999999999999999
Q ss_pred cCCC
Q 042725 434 KAEC 437 (441)
Q Consensus 434 ~~~c 437 (441)
+++.
T Consensus 371 ~~~~ 374 (381)
T 1t6e_X 371 RLPH 374 (381)
T ss_dssp ECCT
T ss_pred cccC
Confidence 9653
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=8.8e-51 Score=397.66 Aligned_cols=292 Identities=18% Similarity=0.276 Sum_probs=223.2
Q ss_pred eEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCC
Q 042725 81 SMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKAPAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPTDCDQNRL 160 (441)
Q Consensus 81 ~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~~c~~~~~ 160 (441)
+..|+++|.||||+|+|.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~--------~~y~~s~Ss~~~~-------------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD--------KSYVKTSTSSATS-------------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS--------SCCCCCTTCEEEE--------------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC--------CccCCcCCccccC--------------------------
Confidence 457999999999999999999999999999975 4699998886543
Q ss_pred cEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCCC---CcceeEeecCCCCCcc--------------ccc--
Q 042725 161 CHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDTS---EDKGILGMNLGRLSFA--------------SQA-- 221 (441)
Q Consensus 161 ~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~~---~~~GIlGLg~~~~s~~--------------~q~-- 221 (441)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||+.... .++||||||++.++.. .++
T Consensus 57 ~~~~i~Yg~Gs-~~G~~~~Dtv~~g~-~~v~~~~fg~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~ 134 (340)
T 1wkr_A 57 DKVSVTYGSGS-FSGTEYTDTVTLGS-LTIPKQSIGVASRDSGFDGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFS 134 (340)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEESCTTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHH
T ss_pred ceEEEEECCcE-EEEEEEEEEEEECC-EEEcceEEEEEEccCCCcCCCcEEECCccccccccccccccccCCCHHHHHHH
Confidence 48999999998 67999999999998 688999999998753 6899999999766542 121
Q ss_pred ----ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECC-EEeecCC
Q 042725 222 ----KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQG-KRLDIPA 296 (441)
Q Consensus 222 ----~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g-~~~~~~~ 296 (441)
..+.|++||.+.... ....|.|+||+.|++ +|.+.+.+.+....+ ..+.||.|. ++|.|++ +.+..
T Consensus 135 ~g~i~~~~FS~~l~~~~~~--~~~~G~l~fGg~d~~---~~~g~l~~~p~~~~~-~~~~~w~v~-~~i~v~~~~~l~~-- 205 (340)
T 1wkr_A 135 QGTIPTNLLAVSFEPTTSE--SSTNGELTFGATDSS---KYTGSITYTPITSTS-PASAYWGIN-QSIRYGSSTSILS-- 205 (340)
T ss_dssp TTSSSSSEEEEECCCCSSS--SEEEEEEEESSCCGG---GCSSCCEEEECCSST-TGGGSSEEE-EEEEETTTEEEEE--
T ss_pred cCCCCCCEEEEEecCCCCC--CCCCcEEEEcccChh---hcccceEEEECccCC-CCcceEEEE-eeEEECCCeEccC--
Confidence 237899999764221 124899999999875 333433332222111 014699999 9999998 77641
Q ss_pred CccccCCCCCCcEEEccccccccccHHHHHHHHHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCce
Q 042725 297 TAFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGV 376 (441)
Q Consensus 297 ~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~ 376 (441)
++.+||||||+++++|++++++|.+++ ++.... ..+.+.++|.... .+|+|+|.| +|.
T Consensus 206 ---------~~~aiiDSGTt~~~lP~~~~~~l~~~~----~a~~~~--~~g~~~~~C~~~~------~~p~i~f~f-~g~ 263 (340)
T 1wkr_A 206 ---------STAGIVDTGTTLTLIASDAFAKYKKAT----GAVADN--NTGLLRLTTAQYA------NLQSLFFTI-GGQ 263 (340)
T ss_dssp ---------EEEEEECTTBCSEEECHHHHHHHHHHH----TCEECT--TTSSEEECHHHHH------TCCCEEEEE-TTE
T ss_pred ---------CCeEEEeCCcccccCCHHHHHHHHHhh----CCEEcC--CCCeEEeeccccc------cCCcEEEEE-CCE
Confidence 246999999999999999999987555 332221 1234568897543 589999999 799
Q ss_pred EEEEcCCcEEEEeC-------CCeEE-EEEEecCCC--CCceeeechhhhcceEEEEECCCCEEEEecCCCCc
Q 042725 377 EILIEKERVLADVG-------GGVHC-VGIGRSEML--GLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSR 439 (441)
Q Consensus 377 ~~~i~~~~y~~~~~-------~~~~C-~~i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~c~~ 439 (441)
.|.|+|++|+++.. ....| +++...... .+..||||++|||++|+|||++++|||||+++|++
T Consensus 264 ~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 264 TFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp EEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred EEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 99999999997643 12457 467653321 12469999999999999999999999999999975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-39 Score=301.28 Aligned_cols=212 Identities=20% Similarity=0.277 Sum_probs=172.8
Q ss_pred cccceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCC
Q 042725 76 SKFKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA---PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLP 152 (441)
Q Consensus 76 ~~~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~---~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~ 152 (441)
+.+..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 7 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~---------------- 70 (239)
T 1b5f_A 7 LTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENG---------------- 70 (239)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEE----------------
T ss_pred eeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCC----------------
Confidence 34445678999999999999999999999999999999995 68889999999999999865
Q ss_pred CCCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCCCcccCCeEEEeeeCC-------CCcceeEeecCCCCC------ccc
Q 042725 153 TDCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSAAQSTLPLILGCAKDT-------SEDKGILGMNLGRLS------FAS 219 (441)
Q Consensus 153 ~~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~~~~~~~~~fg~~~~~-------~~~~GIlGLg~~~~s------~~~ 219 (441)
|.|.+.|++|+ +.|.++.|+|+|++ ..++++.||++... ..++||||||++.++ +.+
T Consensus 71 --------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~ 140 (239)
T 1b5f_A 71 --------TFGAIIYGTGS-ITGFFSQDSVTIGD-LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLN 140 (239)
T ss_dssp --------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHH
T ss_pred --------cEEEEEECCCc-EEEEEEEEEEEECC-cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHH
Confidence 47999999998 57999999999998 58889999999764 257999999999876 334
Q ss_pred cc--ccCceeEecCCCCCCCCcCCccceeeCCCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCC
Q 042725 220 QA--KISKFSYCVPTRVSRVGYTPTGSFYLGENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPAT 297 (441)
Q Consensus 220 q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~ 297 (441)
|. ..+.|++||.+.... ...|.|+||+.|++ +|.+.+.+.+.. ...||.|.+++|.|+++.+.+.
T Consensus 141 qg~i~~~~FS~~l~~~~~~---~~~G~l~fGg~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~~~-- 207 (239)
T 1b5f_A 141 QGLVKERRFSFWLNRNVDE---EEGGELVFGGLDPN---HFRGDHTYVPVT-----YQYYWQFGIGDVLIGDKSTGFC-- 207 (239)
T ss_dssp TTCCSSSEEEEEECCSCSS---SCCEEEEETSCCGG---GEEEEEEEEEEE-----EETTEEEEECCEEETTEECCTT--
T ss_pred CCCCCCCEEEEEEeCCCCC---CCCeEEEECCcChh---hccCceEEEEcc-----cCCeEEEEeeEEEECCEEeccc--
Confidence 43 247999999875322 24899999999876 455555443322 1349999999999999887542
Q ss_pred ccccCCCCCCcEEEccccccccccHHHHHHHHHHH
Q 042725 298 AFHPDASGSGQTIVDSGSEFTYLVDVAYNKIKEEI 332 (441)
Q Consensus 298 ~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l~~~i 332 (441)
..++.+||||||+++++|++++++|.++|
T Consensus 208 ------~~~~~aiiDTGTt~~~lP~~~~~~i~~~i 236 (239)
T 1b5f_A 208 ------APGCQAFADSGTSLLSGPTAIVTQINHAI 236 (239)
T ss_dssp ------TTCEEEEECTTCSSEEECHHHHHHHHHHT
T ss_pred ------CCCCEEEEecCcchhhCCHHHHHHHHHHh
Confidence 23567999999999999999999988655
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.4e-34 Score=269.03 Aligned_cols=215 Identities=20% Similarity=0.263 Sum_probs=166.4
Q ss_pred cccCCeEEEeeeCCC-------CcceeEeecCCCCCcc----------ccc--ccCceeEecCCCCCCCCcCCccceeeC
Q 042725 188 QSTLPLILGCAKDTS-------EDKGILGMNLGRLSFA----------SQA--KISKFSYCVPTRVSRVGYTPTGSFYLG 248 (441)
Q Consensus 188 ~~~~~~~fg~~~~~~-------~~~GIlGLg~~~~s~~----------~q~--~~~~Fs~~l~~~~~~~~~~~~g~l~lG 248 (441)
..++++.|||++... .++||||||++.++.. +|. ..+.|++||.+..... ..|.|+||
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~---~~G~l~fG 79 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQ---PGGELMLG 79 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCS---SCEEEEET
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCC---CCcEEEEC
Confidence 467889999998753 5799999999876542 232 2489999998763321 38999999
Q ss_pred CCCCCCCcceeeeeecCCCCCCCCCCCceeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHHHHHH
Q 042725 249 ENPNSAGFRYVSFLTFPQSQRSPNLDPLAYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAYNKI 328 (441)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~~~l 328 (441)
+.|++ +|.+.+.+.+.. .+.||.|.+++|+|+++.+. +..++.+||||||+++++|++++++|
T Consensus 80 g~d~~---~~~g~l~~~p~~-----~~~~~~v~l~~i~v~~~~~~---------~~~~~~aiiDSGTt~~~lP~~~~~~l 142 (241)
T 1lya_B 80 GTDSK---YYKGSLSYLNVT-----RKAYWQVHLDQVEVASGLTL---------CKEGCEAIVDTGTSLMVGPVDEVREL 142 (241)
T ss_dssp SCCGG---GEEEEEEEEECS-----SBTTBEEEEEEEEETTSCEE---------STTCEEEEECTTCSSEEECHHHHHHH
T ss_pred CcCHH---HcCCceEEEECc-----cccEEEEEEeEEEECCeeEe---------ccCCCEEEEECCCccccCCHHHHHHH
Confidence 99986 566766654433 24599999999999987642 13456799999999999999999999
Q ss_pred HHHHHHHhCCCcccccccCCCcceeccCCcccccccccceEEEEcCceEEEEcCCcEEEEeCC--CeEEE-EEEecCCC-
Q 042725 329 KEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGG--GVHCV-GIGRSEML- 404 (441)
Q Consensus 329 ~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~--~~~C~-~i~~~~~~- 404 (441)
++++. +.... .+.+.++|+... .+|+|+|.| +|.+++|||++|+++... +..|+ +|...+..
T Consensus 143 ~~~~~----~~~~~---~g~~~~~C~~~~------~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~ 208 (241)
T 1lya_B 143 QKAIG----AVPLI---QGEYMIPCEKVS------TLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPP 208 (241)
T ss_dssp HHHHT----CEEEE---TTEEEEEGGGGG------GSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCT
T ss_pred HHHhC----Ceecc---CCcEEEECCCCc------cCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCC
Confidence 87663 32211 245678998654 589999999 799999999999998752 46897 58765421
Q ss_pred -CCceeeechhhhcceEEEEECCCCEEEEecCC
Q 042725 405 -GLASNIFGNFHQQNLWVEFDLASRRVGFAKAE 436 (441)
Q Consensus 405 -~~~~~iLG~~fl~~~y~vfD~~~~riGfA~~~ 436 (441)
..+.||||++|||++|+|||++++|||||+++
T Consensus 209 ~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 209 PSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEechHHhcceEEEEECCCCEEEEEEcC
Confidence 24579999999999999999999999999974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.3e-23 Score=165.37 Aligned_cols=84 Identities=21% Similarity=0.364 Sum_probs=76.2
Q ss_pred cceeEEEEEEEeeCCCCceEEEEEECCCCceeEeCCCCC----CCCCCCCCCCCCCCCcccccCCCCCCCCCccCCCCCC
Q 042725 78 FKYSMALVVSLPIGTPPQTQEMVLDTGSQLSWIKCHKKA----PAPPTTSFDPSRSSSFSVLPCTHPLCKPRIVDFTLPT 153 (441)
Q Consensus 78 ~~~~~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~c~~~~----~~~~~~~y~~~~SsT~~~~~c~~~~c~~~~~~~~~~~ 153 (441)
+..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..++.|||++|+||+..+
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~----------------- 71 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNG----------------- 71 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEE-----------------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCC-----------------
Confidence 344678999999999999999999999999999999986 57789999999999999865
Q ss_pred CCCCCCCcEEeEEeCCCceEEeeEEEEEEeeCC
Q 042725 154 DCDQNRLCHYSYFYADGTFAEGNLVKEKFTFSA 186 (441)
Q Consensus 154 ~c~~~~~~~~~~~Yg~g~~~~G~~~~D~v~~g~ 186 (441)
|.|.+.|++|+ +.|.++.|+|+|++
T Consensus 72 -------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 48999999998 67999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.79 E-value=1.8e-19 Score=139.22 Aligned_cols=83 Identities=22% Similarity=0.336 Sum_probs=68.8
Q ss_pred CCCcceeccCCcccccccccceEEEEcCceEEEEcCCcEEEEeCC--CeEEE-EEEecCC-CCCceeeechhhhcceEEE
Q 042725 347 GGVADMCFDGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGG--GVHCV-GIGRSEM-LGLASNIFGNFHQQNLWVE 422 (441)
Q Consensus 347 ~~~~~~C~~~~~~~~~~~lP~i~f~~~gg~~~~i~~~~y~~~~~~--~~~C~-~i~~~~~-~~~~~~iLG~~fl~~~y~v 422 (441)
|.|.++|.... .+|+|+|.| +|.++.|+|++|+++... +..|+ +|+..+. ...+.||||++|||++|+|
T Consensus 1 G~y~v~C~~~~------~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~v 73 (87)
T 1b5f_B 1 EELQVDCNTLS------SMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTV 73 (87)
T ss_dssp CCCEECGGGGG------GCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEE
T ss_pred CcEEEECCCCC------cCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEE
Confidence 45678998754 689999999 799999999999998643 36897 5876542 1246899999999999999
Q ss_pred EECCCCEEEEecCC
Q 042725 423 FDLASRRVGFAKAE 436 (441)
Q Consensus 423 fD~~~~riGfA~~~ 436 (441)
||++|+|||||+++
T Consensus 74 fD~~~~riGfA~~~ 87 (87)
T 1b5f_B 74 FDYGNLLVGFAEAA 87 (87)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEEcC
Confidence 99999999999874
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=95.21 E-value=0.13 Score=42.79 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=25.1
Q ss_pred eeeechhhhcceEEEEECCCCEEEEecC
Q 042725 408 SNIFGNFHQQNLWVEFDLASRRVGFAKA 435 (441)
Q Consensus 408 ~~iLG~~fl~~~y~vfD~~~~riGfA~~ 435 (441)
..|||..||+++=.+.|+.++++-|...
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 3799999999999999999999988653
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.18 Score=41.74 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=24.4
Q ss_pred eeeechhhhcceEEEEECCCCEEEEec
Q 042725 408 SNIFGNFHQQNLWVEFDLASRRVGFAK 434 (441)
Q Consensus 408 ~~iLG~~fl~~~y~vfD~~~~riGfA~ 434 (441)
..|||..||+++-..+|+.++++-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 379999999999999999999998853
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.041 Score=45.72 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=23.9
Q ss_pred EEEEEEEeeCCCCceEEEEEECCCCceeEe
Q 042725 82 MALVVSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 82 ~~y~~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
..+++++.|+ .+++++++|||++.+.+.
T Consensus 25 ~~~~v~v~In--G~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 25 PMLYINIEIN--NYPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred ceEEEEEEEC--CEEEEEEEECCCCccccC
Confidence 3456899998 589999999999999884
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=83.68 E-value=1.1 Score=34.24 Aligned_cols=24 Identities=42% Similarity=0.617 Sum_probs=22.1
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
++|.|| .|.+++++|||.+++-+.
T Consensus 11 vtvkI~--Gq~~eaLLDTGAD~TVl~ 34 (99)
T 2hs1_A 11 VTIKIG--GQLKEALLDTGADDTIIE 34 (99)
T ss_dssp EEEEET--TEEEEEEECTTCSSEEES
T ss_pred EEEEEC--CEEEEEEeccCCCcEEEe
Confidence 789999 699999999999999995
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.54 E-value=0.99 Score=34.80 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=22.1
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
++|.|| .|.+++++|||.+++-+.
T Consensus 11 v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 11 TIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEC--CEEEEEEeccCCCcEEEc
Confidence 789999 699999999999999985
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=79.76 E-value=1.7 Score=33.07 Aligned_cols=24 Identities=38% Similarity=0.410 Sum_probs=22.1
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
.+|.|| .|.++.++|||.+++-+.
T Consensus 11 vti~I~--Gq~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 11 VTAYIE--GQPVEVLLDTGADDSIVA 34 (99)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEES
T ss_pred EEEEEC--CEEEEEEEecCCCceEEc
Confidence 789999 699999999999999995
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.78 E-value=2.1 Score=33.26 Aligned_cols=28 Identities=29% Similarity=0.510 Sum_probs=23.5
Q ss_pred EEEeeC---CCCceEEEEEECCCCceeEeCC
Q 042725 86 VSLPIG---TPPQTQEMVLDTGSQLSWIKCH 113 (441)
Q Consensus 86 ~~I~iG---tP~Q~~~v~~DTGSs~lWV~c~ 113 (441)
.+|.|| +|+|.++.++|||-+++-+.-.
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 556666 7899999999999999999643
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.98 E-value=3.1 Score=32.61 Aligned_cols=23 Identities=17% Similarity=0.420 Sum_probs=20.9
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
. |.|| .|.++.++|||.+++-+.
T Consensus 17 v-ikI~--Gq~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 17 L-IFVN--GYPIKFLLDTGADITVLN 39 (116)
T ss_dssp E-EEET--TEEEEEEECTTCSSCEEE
T ss_pred E-EEEC--CEEEEEEecCCCCcEEEc
Confidence 5 8898 699999999999999985
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=70.10 E-value=3.4 Score=33.95 Aligned_cols=26 Identities=15% Similarity=0.392 Sum_probs=23.1
Q ss_pred EEEEEeeCCCCceEEEEEECCCCceeEe
Q 042725 84 LVVSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 84 y~~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
|++++.|. .++++++||||++.+.+.
T Consensus 25 l~v~~~In--g~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 25 LYINCKVN--GHPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEEC--CEEEEEEEeCCCCcEeeC
Confidence 55899998 699999999999999994
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=69.71 E-value=4.2 Score=31.67 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=22.0
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
..|.|| .|.++.++|||-+++-+.
T Consensus 12 vti~I~--Gq~~eaLLDTGADdTVi~ 35 (114)
T 3sqf_A 12 LTLWLD--DKMFTGLINTGADVTIIK 35 (114)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEC--CEEEEEEEccCCCceEEe
Confidence 678999 699999999999999995
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=60.07 E-value=7.9 Score=31.06 Aligned_cols=24 Identities=33% Similarity=0.566 Sum_probs=21.9
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
+++.|+ .|.+++++|||.+++-+.
T Consensus 25 v~i~I~--G~~~~~LlDTGAd~tVl~ 48 (132)
T 3slz_A 25 ITLKVG--GQPVTFLVDTGAQHSVLT 48 (132)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEC
T ss_pred EEEEEC--CEEEEEEEeCCCCeEEEc
Confidence 788998 599999999999999985
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=54.48 E-value=10 Score=32.80 Aligned_cols=24 Identities=42% Similarity=0.602 Sum_probs=22.1
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
++|.|| .|.++.++|||.+++-+.
T Consensus 11 vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 11 VTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEC
T ss_pred EEEEEC--CEEEEEEEecCCCceEEe
Confidence 789999 699999999999999985
No 50
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=51.69 E-value=12 Score=28.02 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=13.6
Q ss_pred EEEccccccccccHH
Q 042725 309 TIVDSGSEFTYLVDV 323 (441)
Q Consensus 309 ~ivDTGTs~~~lp~~ 323 (441)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 899999999999854
No 51
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=51.11 E-value=12 Score=29.58 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.7
Q ss_pred eeCCCCceEEEEEECCCCceeEeC
Q 042725 89 PIGTPPQTQEMVLDTGSQLSWIKC 112 (441)
Q Consensus 89 ~iGtP~Q~~~v~~DTGSs~lWV~c 112 (441)
.|| .|.++.++|||-+++-+.-
T Consensus 26 ~i~--gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 26 KQR--SVYITALLDSGADITIISE 47 (124)
T ss_dssp SCS--EEEEEEEECTTCSSCEEET
T ss_pred cCC--CEEEEEEecCCCCcEEEec
Confidence 366 5889999999999999963
No 52
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=46.15 E-value=13 Score=28.41 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=27.2
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHHH
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVAY 325 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~~ 325 (441)
-|+=.+-.+.|+|+.+. +++|||.-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~e---------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPLN---------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEccccC
Confidence 45556667999999765 99999999999986654
No 53
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=44.71 E-value=12 Score=28.38 Aligned_cols=30 Identities=20% Similarity=0.491 Sum_probs=24.6
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEcccccccccc
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLV 321 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp 321 (441)
-|+-++-.+.|+|+.+. +++|||.-.+.+.
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~ 34 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIE 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEES
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEe
Confidence 45556667999999875 9999999999885
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=43.82 E-value=13 Score=28.18 Aligned_cols=29 Identities=17% Similarity=0.491 Sum_probs=24.4
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccc
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYL 320 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~l 320 (441)
-|+-++-.+.|+|+.+. +++|||.-.+.+
T Consensus 5 l~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl 33 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE---------------VLLDTGADDSIV 33 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEE
T ss_pred cccCCeEEEEECCEEEE---------------EEEecCCCceEE
Confidence 46667777999999876 999999998887
No 55
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=42.99 E-value=15 Score=28.65 Aligned_cols=30 Identities=17% Similarity=0.332 Sum_probs=25.6
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccH
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVD 322 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~ 322 (441)
-|+=++- +.|+|+.+. +++|||.-.+.+++
T Consensus 11 l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 6777778 999999875 99999999998864
No 56
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=36.58 E-value=26 Score=27.96 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=21.9
Q ss_pred eeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccH
Q 042725 281 PMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVD 322 (441)
Q Consensus 281 ~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~ 322 (441)
++-.+.|+|+.+. +++|||...+.++.
T Consensus 23 P~v~i~I~G~~~~---------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVGGQPVT---------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEETTEEEE---------------EEECTTCSSCEECS
T ss_pred CEEEEEECCEEEE---------------EEEeCCCCeEEEcc
Confidence 3445889998775 89999999999964
No 57
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=32.59 E-value=36 Score=29.32 Aligned_cols=24 Identities=42% Similarity=0.602 Sum_probs=21.8
Q ss_pred EEEeeCCCCceEEEEEECCCCceeEe
Q 042725 86 VSLPIGTPPQTQEMVLDTGSQLSWIK 111 (441)
Q Consensus 86 ~~I~iGtP~Q~~~v~~DTGSs~lWV~ 111 (441)
.++.|| .|.++.++|||.+++-+.
T Consensus 115 ~~iki~--Gq~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 115 VTIRIG--GQLKEALLDTGADDTVIE 138 (203)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEC
T ss_pred EEEEEC--CEEEeeeecccCCceeee
Confidence 788999 599999999999999984
No 58
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=25.85 E-value=54 Score=28.64 Aligned_cols=27 Identities=19% Similarity=0.223 Sum_probs=20.9
Q ss_pred EEEeeCCC----CceEEEEEECCCCceeEeC
Q 042725 86 VSLPIGTP----PQTQEMVLDTGSQLSWIKC 112 (441)
Q Consensus 86 ~~I~iGtP----~Q~~~v~~DTGSs~lWV~c 112 (441)
..|.||.- .....+++|||++.+++|-
T Consensus 106 ~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~ 136 (241)
T 1lya_B 106 DQVEVASGLTLCKEGCEAIVDTGTSLMVGPV 136 (241)
T ss_dssp EEEEETTSCEESTTCEEEEECTTCSSEEECH
T ss_pred eEEEECCeeEeccCCCEEEEECCCccccCCH
Confidence 45778752 3457899999999999973
No 59
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=24.98 E-value=50 Score=30.47 Aligned_cols=30 Identities=30% Similarity=0.492 Sum_probs=22.8
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHH
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVA 324 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~ 324 (441)
.|.+. |.||.+.+. ++||||++.+++|...
T Consensus 16 ~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 16 EYITP---VTIGGTTLN---------------LNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEE---EEETTEEEE---------------EEEETTCCCEEECBTT
T ss_pred EEEEE---EEECCEEEE---------------EEEeCCCcceEEecCC
Confidence 56554 678866554 8999999999998753
No 60
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=24.97 E-value=68 Score=29.59 Aligned_cols=16 Identities=19% Similarity=0.208 Sum_probs=14.2
Q ss_pred EEEccccccccccHHH
Q 042725 309 TIVDSGSEFTYLVDVA 324 (441)
Q Consensus 309 ~ivDTGTs~~~lp~~~ 324 (441)
++||||++.+++|...
T Consensus 32 v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 32 LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEEcCCCCCeEEecCC
Confidence 8999999999998753
No 61
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.76 E-value=74 Score=29.33 Aligned_cols=15 Identities=20% Similarity=0.222 Sum_probs=13.7
Q ss_pred EEEccccccccccHH
Q 042725 309 TIVDSGSEFTYLVDV 323 (441)
Q Consensus 309 ~ivDTGTs~~~lp~~ 323 (441)
++||||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 32 LDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEETTCCCEEECBT
T ss_pred EEECCCCCCeEEecC
Confidence 899999999999864
No 62
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=23.71 E-value=54 Score=30.22 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=22.7
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHH
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVA 324 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~ 324 (441)
.|.+. |.||.+.+. ++||||++.+++|...
T Consensus 16 ~Y~~~---i~iG~q~~~---------------v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 16 EYITQ---VTVGDDTLG---------------LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp CEEEE---EEETTEEEE---------------EEEETTCCCEEECBTT
T ss_pred EEEEE---EEECCEEEE---------------EEEcCCCcceEEecCC
Confidence 56554 678855554 8999999999998753
No 63
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=22.76 E-value=70 Score=29.45 Aligned_cols=29 Identities=28% Similarity=0.429 Sum_probs=22.1
Q ss_pred eeEEeeeeEEEC--CEEeecCCCccccCCCCCCcEEEccccccccccHH
Q 042725 277 AYSVPMQGVRIQ--GKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDV 323 (441)
Q Consensus 277 ~w~v~~~~i~v~--g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~ 323 (441)
.|.+. |.|| .+.+. ++||||++.+++|..
T Consensus 16 ~Y~~~---i~iGTP~q~~~---------------v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 16 EYYGQ---VTIGTPGKKFN---------------LDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEE---EEETTTTEEEE---------------EEEETTCCCCEEEBT
T ss_pred EEEEE---EEECCCCeEEE---------------EEEcCCCCCEEEccC
Confidence 56554 6788 55554 899999999999864
No 64
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.63 E-value=55 Score=30.28 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=22.1
Q ss_pred eeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHH
Q 042725 277 AYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDV 323 (441)
Q Consensus 277 ~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~ 323 (441)
.|.+. |.||.+.+. ++||||++.+++|..
T Consensus 18 ~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 18 QYAGI---TKIGNQNFL---------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TSEEE---EEETTEEEE---------------EEEETTCCCEEEECT
T ss_pred EEEEE---EEECCEEEE---------------EEEeCCCcceEEecC
Confidence 56554 678866554 899999999999854
No 65
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=21.80 E-value=54 Score=30.22 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=23.1
Q ss_pred ceeEEeeeeEEECCEEeecCCCccccCCCCCCcEEEccccccccccHHH
Q 042725 276 LAYSVPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVDVA 324 (441)
Q Consensus 276 ~~w~v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~~~ 324 (441)
..|.+. |.||.+.+. ++||||++.+++|...
T Consensus 14 ~~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 14 EEYLTP---VTVGKSTLH---------------LDFDTGSADLWVFSDE 44 (325)
T ss_dssp SCEEEE---EEEBTEEEE---------------EEEETTCCCEEEECTT
T ss_pred CEEEEE---EEECCEEEE---------------EEEeCCCccceEeeCC
Confidence 356555 667766554 8999999999998754
No 66
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=21.47 E-value=35 Score=26.93 Aligned_cols=14 Identities=29% Similarity=0.710 Sum_probs=12.3
Q ss_pred EEEccccccccccH
Q 042725 309 TIVDSGSEFTYLVD 322 (441)
Q Consensus 309 ~ivDTGTs~~~lp~ 322 (441)
+++|||.-.+.+++
T Consensus 34 aLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 34 ALLDSGADITIISE 47 (124)
T ss_dssp EEECTTCSSCEEET
T ss_pred EEecCCCCcEEEec
Confidence 99999999998863
No 67
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=21.30 E-value=46 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.462 Sum_probs=22.0
Q ss_pred EeeeeEEEC-----CEEeecCCCccccCCCCCCcEEEccccccccccH
Q 042725 280 VPMQGVRIQ-----GKRLDIPATAFHPDASGSGQTIVDSGSEFTYLVD 322 (441)
Q Consensus 280 v~~~~i~v~-----g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp~ 322 (441)
-.+-.+.|+ |+.+. |++|||.-.+.+++
T Consensus 10 RPlvtikI~~~~~~Gq~~e---------------aLLDTGADdTVl~~ 42 (116)
T 3liy_A 10 RPVIKAQVDTQTSHPKTIE---------------ALLDTGADMTVIPI 42 (116)
T ss_dssp CCEEEEEEECSSSCCEEEE---------------EEECTTBSSCEEEG
T ss_pred CCeEEEEEccccCCCeEeE---------------EEeccCCCccEEec
Confidence 456678888 77654 99999999999863
No 68
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=21.14 E-value=82 Score=24.33 Aligned_cols=27 Identities=15% Similarity=0.387 Sum_probs=22.0
Q ss_pred EeeeeEEECCEEeecCCCccccCCCCCCcEEEcccccccccc
Q 042725 280 VPMQGVRIQGKRLDIPATAFHPDASGSGQTIVDSGSEFTYLV 321 (441)
Q Consensus 280 v~~~~i~v~g~~~~~~~~~~~~~~~~~~~~ivDTGTs~~~lp 321 (441)
-++-.+.|+|+.+. +++|||.-.+.+.
T Consensus 9 RP~vti~I~Gq~~e---------------aLLDTGADdTVi~ 35 (114)
T 3sqf_A 9 KPSLTLWLDDKMFT---------------GLINTGADVTIIK 35 (114)
T ss_dssp CCEEEEEETTEEEE---------------EEECTTCSSCEEE
T ss_pred CCeEEEEECCEEEE---------------EEEccCCCceEEe
Confidence 34556889998875 9999999988885
No 69
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=20.87 E-value=66 Score=28.14 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=13.6
Q ss_pred EEEccccccccccHH
Q 042725 309 TIVDSGSEFTYLVDV 323 (441)
Q Consensus 309 ~ivDTGTs~~~lp~~ 323 (441)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEEcC
Confidence 899999999999854
Done!