Query 042730
Match_columns 88
No_of_seqs 112 out of 631
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 15:26:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042730.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042730hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 66.5 1.1 8E-05 23.1 1.2 18 46-63 1-18 (36)
2 d1nn7a_ d.42.1.2 (A:) Potassiu 66.2 0.76 5.5E-05 27.9 0.6 55 28-87 2-57 (105)
3 d1y6ia2 a.261.1.1 (A:83-233) M 64.2 0.26 1.9E-05 32.7 -2.1 31 21-54 118-148 (151)
4 d1z3xa2 a.261.1.1 (A:88-235) G 49.0 0.24 1.7E-05 32.8 -4.4 29 21-52 118-146 (148)
5 d3kvta_ d.42.1.2 (A:) akv3.1 v 47.9 2.1 0.00015 25.7 0.3 55 27-87 3-60 (103)
6 d1yu5x1 a.14.1.1 (X:10-76) Vil 46.3 3.6 0.00026 23.7 1.2 19 45-63 31-49 (67)
7 d1qzpa_ a.14.1.1 (A:) Dematin 40.9 3.8 0.00028 23.6 0.7 19 45-63 32-50 (68)
8 d1tjya_ c.93.1.1 (A:) AI-2 rec 39.8 15 0.0011 23.0 3.8 29 38-66 4-35 (316)
9 d1ujsa_ a.14.1.1 (A:) Actin-bi 39.4 5.6 0.0004 24.0 1.3 21 44-64 45-65 (88)
10 d1b0aa2 c.58.1.2 (A:2-122) Tet 35.6 26 0.0019 21.0 4.2 52 23-87 31-84 (121)
11 d1yu8x1 a.14.1.1 (X:42-76) Vil 35.4 6.8 0.0005 19.7 1.1 17 47-63 1-17 (35)
12 d1y74b1 a.194.1.1 (B:83-132) P 32.4 6.4 0.00046 21.4 0.7 20 45-64 26-49 (50)
13 d1t1da_ d.42.1.2 (A:) Shaker p 32.1 4.9 0.00036 23.9 0.2 54 28-87 3-59 (100)
14 d2bkfa1 d.15.2.2 (A:1-85) Next 30.3 48 0.0035 19.2 5.2 51 29-82 8-66 (85)
15 d1qusa_ d.2.1.6 (A:) 36 kDa so 29.6 14 0.001 26.3 2.4 24 44-67 13-36 (322)
16 d1dkgd1 c.55.1.1 (D:3-185) Hea 28.8 12 0.00091 23.2 1.8 40 43-82 109-148 (183)
17 d1nnfa_ c.94.1.1 (A:) Ferric-b 28.1 24 0.0018 22.3 3.2 26 28-66 2-27 (308)
18 d2c35b2 d.230.1.1 (B:1-77) N-t 26.8 42 0.0031 18.2 3.8 37 38-74 9-46 (77)
19 d2r85a1 c.30.1.8 (A:1-99) 5-fo 24.5 0.36 2.6E-05 30.2 -6.4 28 17-44 61-88 (99)
20 d1vi7a2 d.58.11.2 (A:138-208) 22.7 43 0.0031 17.6 3.2 46 38-86 3-56 (71)
21 d1mlaa1 c.19.1.1 (A:3-127,A:19 21.8 13 0.00098 24.3 0.9 20 47-66 22-41 (235)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.47 E-value=1.1 Score=23.10 Aligned_cols=18 Identities=28% Similarity=0.595 Sum_probs=16.8
Q ss_pred ccCchHHHHHHhhhhhhc
Q 042730 46 YLKHPSFQNLLSQTEEEF 63 (88)
Q Consensus 46 ~L~hP~F~~LL~~aeeEf 63 (88)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999998
No 2
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=66.19 E-value=0.76 Score=27.89 Aligned_cols=55 Identities=20% Similarity=0.304 Sum_probs=38.3
Q ss_pred EEEEEcCCcceEEEEecccc-CchHHHHHHhhhhhhcCCccCCCceEeeCCHHHHHHHHhc
Q 042730 28 FVVYVGETTKKRFVLPISYL-KHPSFQNLLSQTEEEFGFDHPMGGLTIPCSEEVFMDLISS 87 (88)
Q Consensus 28 ~~VyVG~e~~~RfvVp~~~L-~hP~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~F~~vl~~ 87 (88)
+.+-||. ++|.+..+-| ++|.- +|.+.....-++.++|.+-|--|...|+.||..
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~y 57 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNF 57 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHH
Confidence 5677884 8899998877 45532 223333333445456899999999999999874
No 3
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=64.16 E-value=0.26 Score=32.72 Aligned_cols=31 Identities=23% Similarity=0.453 Sum_probs=19.6
Q ss_pred ccCCCceEEEEEcCCcceEEEEeccccCchHHHH
Q 042730 21 TIVPKGHFVVYVGETTKKRFVLPISYLKHPSFQN 54 (88)
Q Consensus 21 ~~vpkG~~~VyVG~e~~~RfvVp~~~L~hP~F~~ 54 (88)
..+|+||+|+.- .-+.-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~-~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLN-QLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCC-CTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccc-hhhhHH--HHHHHHcCcchhh
Confidence 358999999754 211111 3345889998864
No 4
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=48.95 E-value=0.24 Score=32.79 Aligned_cols=29 Identities=21% Similarity=0.454 Sum_probs=18.7
Q ss_pred ccCCCceEEEEEcCCcceEEEEeccccCchHH
Q 042730 21 TIVPKGHFVVYVGETTKKRFVLPISYLKHPSF 52 (88)
Q Consensus 21 ~~vpkG~~~VyVG~e~~~RfvVp~~~L~hP~F 52 (88)
..+|+||+|+.- . . +-..|--..|+||.|
T Consensus 118 l~AP~GHLP~~~-~-l-rg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 118 LSAPRGHLPLTN-Q-L-RGVQVLNALLNHPAW 146 (148)
T ss_dssp TTSCTTCCSCCC-C-T-TCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCC-c-c-chHHHHHHHhcCccc
Confidence 368999999753 2 1 333344567888876
No 5
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=47.94 E-value=2.1 Score=25.67 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=38.6
Q ss_pred eEEEEEcCCcceEEEEeccccCc-h--HHHHHHhhhhhhcCCccCCCceEeeCCHHHHHHHHhc
Q 042730 27 HFVVYVGETTKKRFVLPISYLKH-P--SFQNLLSQTEEEFGFDHPMGGLTIPCSEEVFMDLISS 87 (88)
Q Consensus 27 ~~~VyVG~e~~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~F~~vl~~ 87 (88)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.++|.+-|--|...|++||..
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~y 60 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINY 60 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHH
Confidence 45677884 899999887763 4 23322 23333445556899999999999999975
No 6
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=46.30 E-value=3.6 Score=23.66 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=18.1
Q ss_pred cccCchHHHHHHhhhhhhc
Q 042730 45 SYLKHPSFQNLLSQTEEEF 63 (88)
Q Consensus 45 ~~L~hP~F~~LL~~aeeEf 63 (88)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 7
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.95 E-value=3.8 Score=23.63 Aligned_cols=19 Identities=26% Similarity=0.483 Sum_probs=18.1
Q ss_pred cccCchHHHHHHhhhhhhc
Q 042730 45 SYLKHPSFQNLLSQTEEEF 63 (88)
Q Consensus 45 ~~L~hP~F~~LL~~aeeEf 63 (88)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 8
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=39.83 E-value=15 Score=23.00 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=23.4
Q ss_pred eEEEEeccccCchHHHHHHh---hhhhhcCCc
Q 042730 38 KRFVLPISYLKHPSFQNLLS---QTEEEFGFD 66 (88)
Q Consensus 38 ~RfvVp~~~L~hP~F~~LL~---~aeeEfG~~ 66 (88)
+|..+=+..+++|.|....+ ++++++||+
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 78888899999999998855 556688874
No 9
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.43 E-value=5.6 Score=23.99 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=18.9
Q ss_pred ccccCchHHHHHHhhhhhhcC
Q 042730 44 ISYLKHPSFQNLLSQTEEEFG 64 (88)
Q Consensus 44 ~~~L~hP~F~~LL~~aeeEfG 64 (88)
-.||+.-.|++++.++.+||-
T Consensus 45 E~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 45 ERHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGGSCTTHHHHHHSSCHHHHT
T ss_pred HhcCCHHHHHHHHCcCHHHHH
Confidence 369999999999999999984
No 10
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=35.63 E-value=26 Score=20.98 Aligned_cols=52 Identities=27% Similarity=0.397 Sum_probs=37.5
Q ss_pred CCCceEEEEEcCCcceEEEEeccccCchHHHHHHhhhhhhcCCccCCCceEee--CCHHHHHHHHhc
Q 042730 23 VPKGHFVVYVGETTKKRFVLPISYLKHPSFQNLLSQTEEEFGFDHPMGGLTIP--CSEEVFMDLISS 87 (88)
Q Consensus 23 vpkG~~~VyVG~e~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~IP--C~~~~F~~vl~~ 87 (88)
.+.+...|+||++. ..-.....-.+++++.|+... .+.+| |+..++...+..
T Consensus 31 ~~P~LavI~vg~d~-----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~ 84 (121)
T d1b0aa2 31 RAPGLAVVLVGSNP-----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDT 84 (121)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHH
T ss_pred CCceEEEEEeCCCh-----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHH
Confidence 45688899999842 012466777888999999864 56776 777888877754
No 11
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.44 E-value=6.8 Score=19.73 Aligned_cols=17 Identities=24% Similarity=0.511 Sum_probs=14.3
Q ss_pred cCchHHHHHHhhhhhhc
Q 042730 47 LKHPSFQNLLSQTEEEF 63 (88)
Q Consensus 47 L~hP~F~~LL~~aeeEf 63 (88)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999999987
No 12
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.41 E-value=6.4 Score=21.44 Aligned_cols=20 Identities=30% Similarity=0.565 Sum_probs=14.9
Q ss_pred cccCchHHHHHHhh----hhhhcC
Q 042730 45 SYLKHPSFQNLLSQ----TEEEFG 64 (88)
Q Consensus 45 ~~L~hP~F~~LL~~----aeeEfG 64 (88)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 46788999999974 555555
No 13
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=32.08 E-value=4.9 Score=23.86 Aligned_cols=54 Identities=17% Similarity=0.173 Sum_probs=36.1
Q ss_pred EEEEEcCCcceEEEEeccccCc-h--HHHHHHhhhhhhcCCccCCCceEeeCCHHHHHHHHhc
Q 042730 28 FVVYVGETTKKRFVLPISYLKH-P--SFQNLLSQTEEEFGFDHPMGGLTIPCSEEVFMDLISS 87 (88)
Q Consensus 28 ~~VyVG~e~~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~F~~vl~~ 87 (88)
+.+-||. ++|.+..+-|.. | .+..|... .-.++.++|.+-|--|...|++||..
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~~---~~~~~~~~g~~FiDRdp~~F~~IL~f 59 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKR---NRYYDPLRNEYFFDRNRPSFDAILYF 59 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHH---GGGEETTTTEEEECSCSTTHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHhC---CCcCCCCCCeEEEecCHHHHHHHHHH
Confidence 4567884 889998877654 3 23333221 22244456899999999999999864
No 14
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.30 E-value=48 Score=19.25 Aligned_cols=51 Identities=12% Similarity=0.191 Sum_probs=34.9
Q ss_pred EEEEcCCcceEEEEeccccCchHHHHHHhhhhhhcCC--------ccCCCceEeeCCHHHHH
Q 042730 29 VVYVGETTKKRFVLPISYLKHPSFQNLLSQTEEEFGF--------DHPMGGLTIPCSEEVFM 82 (88)
Q Consensus 29 ~VyVG~e~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~--------~~~~G~L~IPC~~~~F~ 82 (88)
-|..|++- .||.++.. +++.|.+|..+-+.-|+. +.++--++|.|+++.=|
T Consensus 8 Kvtf~~dt-~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E 66 (85)
T d2bkfa1 8 NVTFKNEI-QSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 66 (85)
T ss_dssp EEEETTEE-EEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred EEEECCce-EEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHH
Confidence 34446544 89998533 357789999998888884 33445688999876544
No 15
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=29.56 E-value=14 Score=26.33 Aligned_cols=24 Identities=21% Similarity=0.510 Sum_probs=21.7
Q ss_pred ccccCchHHHHHHhhhhhhcCCcc
Q 042730 44 ISYLKHPSFQNLLSQTEEEFGFDH 67 (88)
Q Consensus 44 ~~~L~hP~F~~LL~~aeeEfG~~~ 67 (88)
-+|.+||-+++++++..+++||+.
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCH
Confidence 478999999999999999999975
No 16
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=28.75 E-value=12 Score=23.15 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=29.5
Q ss_pred eccccCchHHHHHHhhhhhhcCCccCCCceEeeCCHHHHH
Q 042730 43 PISYLKHPSFQNLLSQTEEEFGFDHPMGGLTIPCSEEVFM 82 (88)
Q Consensus 43 p~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~IPC~~~~F~ 82 (88)
..+-|-.-+++.|.+.|++.+|-...+-+|++|+.....+
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~ 148 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQ 148 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 3444556678888999999989776556789998766544
No 17
>d1nnfa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Haemophilus influenzae [TaxId: 727]}
Probab=28.12 E-value=24 Score=22.31 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=20.4
Q ss_pred EEEEEcCCcceEEEEeccccCchHHHHHHhhhhhhcCCc
Q 042730 28 FVVYVGETTKKRFVLPISYLKHPSFQNLLSQTEEEFGFD 66 (88)
Q Consensus 28 ~~VyVG~e~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~ 66 (88)
+.||.|... ...+++++.-|+|+|..
T Consensus 2 ~~vy~~~~~-------------~~~~~l~~~Fek~tGIk 27 (308)
T d1nnfa_ 2 ITVYNGQQK-------------EAATAVAKAFEQETGIK 27 (308)
T ss_dssp EEEEECSCH-------------HHHHHHHHHHHHHSCCC
T ss_pred EEEEeCCCH-------------HHHHHHHHHHHHhhCCE
Confidence 578887654 68888998889988864
No 18
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.85 E-value=42 Score=18.20 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=27.5
Q ss_pred eEEEEeccccCchHHHHHHhhhhhhc-CCccCCCceEe
Q 042730 38 KRFVLPISYLKHPSFQNLLSQTEEEF-GFDHPMGGLTI 74 (88)
Q Consensus 38 ~RfvVp~~~L~hP~F~~LL~~aeeEf-G~~~~~G~L~I 74 (88)
....||-++|+.+.-+.|.++..+.| |-..++.++.|
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~egk~~~~~G~~i 46 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVI 46 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHTTCEETTTEEEE
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhCCEEeCCCCEEE
Confidence 56789999999999999999988877 33333355544
No 19
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.55 E-value=0.36 Score=30.22 Aligned_cols=28 Identities=29% Similarity=0.487 Sum_probs=19.1
Q ss_pred ccccccCCCceEEEEEcCCcceEEEEec
Q 042730 17 CSQATIVPKGHFVVYVGETTKKRFVLPI 44 (88)
Q Consensus 17 ~~~~~~vpkG~~~VyVG~e~~~RfvVp~ 44 (88)
....--+|-|.|++|+|-+.-+.|.||+
T Consensus 61 ~~N~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 61 NLNAVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp HTTEEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred HCCEEEecCCCEEEEEcHHHHhcCCCCc
Confidence 3445679999999999964323355553
No 20
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.69 E-value=43 Score=17.58 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=32.2
Q ss_pred eEEEEeccccCchHHHHHHhhh-----hhhcCCccCCCceEeeC---CHHHHHHHHh
Q 042730 38 KRFVLPISYLKHPSFQNLLSQT-----EEEFGFDHPMGGLTIPC---SEEVFMDLIS 86 (88)
Q Consensus 38 ~RfvVp~~~L~hP~F~~LL~~a-----eeEfG~~~~~G~L~IPC---~~~~F~~vl~ 86 (88)
.+|.+.++|=....++.+|++. ..+|+=. -.+++-+ .++.|..-+.
T Consensus 3 t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~---V~l~v~vp~~~~~~f~~~l~ 56 (71)
T d1vi7a2 3 TEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAF---VLLRVALPAAKVAEFSAKLA 56 (71)
T ss_dssp EEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSS---EEEEEEECSSTHHHHHHHHH
T ss_pred eEEEEEeccccHHHHHHHHHHCCCEEEeeeeccE---EEEEEEECHHHHHHHHHHHH
Confidence 6899999999999999999986 3456532 3344433 4666665543
No 21
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=21.81 E-value=13 Score=24.28 Aligned_cols=20 Identities=15% Similarity=0.466 Sum_probs=17.5
Q ss_pred cCchHHHHHHhhhhhhcCCc
Q 042730 47 LKHPSFQNLLSQTEEEFGFD 66 (88)
Q Consensus 47 L~hP~F~~LL~~aeeEfG~~ 66 (88)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 35799999999999999875
Done!