Query 042731
Match_columns 481
No_of_seqs 123 out of 1426
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:27:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.2E-63 7.4E-68 500.1 42.1 424 1-467 22-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.8E-57 1.3E-61 462.1 44.5 438 1-468 15-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.7E-57 5.8E-62 466.2 39.0 436 1-467 17-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 9.3E-56 3.2E-60 449.0 43.9 426 1-468 16-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.3E-55 1.5E-59 445.2 42.2 420 1-467 18-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 6.8E-41 2.3E-45 338.6 33.9 390 1-467 21-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.2E-40 4.2E-45 334.0 24.7 351 1-463 31-396 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.6E-39 9E-44 325.9 24.0 357 1-442 9-383 (415)
9 3h4t_A Glycosyltransferase GTF 100.0 4.5E-37 1.6E-41 308.3 31.5 363 1-470 9-385 (404)
10 1rrv_A Glycosyltransferase GTF 100.0 6.8E-38 2.3E-42 315.7 24.6 375 1-468 9-401 (416)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 2.9E-37 1E-41 311.0 27.5 367 1-467 29-413 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.9E-36 6.5E-41 303.5 30.4 380 1-467 13-398 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 3.8E-36 1.3E-40 305.3 26.9 367 1-467 29-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 4.4E-35 1.5E-39 292.0 28.5 351 1-467 9-379 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 3.4E-34 1.2E-38 289.9 28.7 376 1-466 16-398 (430)
16 4fzr_A SSFS6; structural genom 100.0 8.4E-33 2.9E-37 276.9 22.6 338 1-442 24-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.8E-32 1.7E-36 271.4 25.8 350 1-464 29-394 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.8E-31 1.7E-35 263.4 26.2 355 1-466 10-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.8E-29 1.3E-33 251.4 28.5 356 1-466 29-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 8.5E-28 2.9E-32 237.2 28.4 333 4-470 14-359 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.6E-26 5.6E-31 202.8 15.5 164 250-442 5-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 5.6E-18 1.9E-22 166.8 27.8 332 4-474 18-362 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.7E-14 6E-19 135.2 22.3 118 265-402 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 4.5E-15 1.5E-19 133.6 10.3 134 264-420 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.2 3.9E-08 1.3E-12 98.6 31.9 346 4-441 43-409 (438)
26 1v4v_A UDP-N-acetylglucosamine 99.1 2.8E-09 9.7E-14 104.8 20.2 78 333-424 255-335 (376)
27 3okp_A GDP-mannose-dependent a 99.1 1.1E-07 3.8E-12 93.7 30.8 317 4-439 20-360 (394)
28 2gek_A Phosphatidylinositol ma 99.1 1.7E-08 5.6E-13 100.2 24.7 145 268-439 209-365 (406)
29 2jjm_A Glycosyl transferase, g 99.1 6.3E-08 2.1E-12 95.8 28.5 322 4-438 28-365 (394)
30 3fro_A GLGA glycogen synthase; 99.1 1.3E-07 4.6E-12 94.5 29.9 165 268-468 252-429 (439)
31 3dzc_A UDP-N-acetylglucosamine 99.0 8.8E-09 3E-13 102.1 16.6 79 332-424 287-368 (396)
32 1vgv_A UDP-N-acetylglucosamine 99.0 4.4E-09 1.5E-13 103.7 13.9 78 333-424 263-343 (384)
33 3ot5_A UDP-N-acetylglucosamine 99.0 2.6E-08 9.1E-13 98.8 19.1 79 332-424 281-362 (403)
34 2iw1_A Lipopolysaccharide core 98.9 1.6E-06 5.5E-11 84.6 30.3 97 333-440 253-354 (374)
35 2r60_A Glycosyl transferase, g 98.9 3.4E-07 1.1E-11 93.6 24.9 97 332-440 334-441 (499)
36 4hwg_A UDP-N-acetylglucosamine 98.8 1.8E-07 6.1E-12 92.1 19.8 130 266-424 203-343 (385)
37 3beo_A UDP-N-acetylglucosamine 98.7 4.6E-06 1.6E-10 81.5 23.7 78 333-424 263-343 (375)
38 2x6q_A Trehalose-synthase TRET 98.7 1.8E-05 6.1E-10 78.6 27.9 93 332-438 292-394 (416)
39 2xci_A KDO-transferase, 3-deox 98.6 2E-05 6.8E-10 77.2 25.0 98 334-442 261-364 (374)
40 2iuy_A Avigt4, glycosyltransfe 98.6 2.5E-06 8.4E-11 82.4 17.8 125 269-422 164-307 (342)
41 3s28_A Sucrose synthase 1; gly 98.5 1.2E-05 4.1E-10 86.0 21.9 94 333-438 640-749 (816)
42 2qzs_A Glycogen synthase; glyc 98.3 8E-05 2.7E-09 75.5 22.9 164 268-470 293-477 (485)
43 2f9f_A First mannosyl transfer 98.3 7.7E-06 2.6E-10 71.0 12.5 128 269-425 25-164 (177)
44 1rzu_A Glycogen synthase 1; gl 98.2 0.00041 1.4E-08 70.1 25.9 162 268-468 292-474 (485)
45 3oy2_A Glycosyltransferase B73 97.9 0.0016 5.6E-08 64.1 22.9 88 335-436 256-368 (413)
46 3qhp_A Type 1 capsular polysac 97.8 0.00021 7.2E-09 60.8 12.0 146 267-441 2-158 (166)
47 2bfw_A GLGA glycogen synthase; 97.8 0.00053 1.8E-08 60.2 14.3 145 269-439 38-197 (200)
48 2vsy_A XCC0866; transferase, g 97.8 0.0011 3.8E-08 68.4 18.9 97 333-438 434-537 (568)
49 4gyw_A UDP-N-acetylglucosamine 97.7 0.0011 3.8E-08 70.4 18.6 175 265-469 521-705 (723)
50 2hy7_A Glucuronosyltransferase 97.3 0.066 2.2E-06 52.6 24.0 75 332-424 264-353 (406)
51 3q3e_A HMW1C-like glycosyltran 97.3 0.0035 1.2E-07 64.2 14.6 150 267-435 441-600 (631)
52 3rhz_A GTF3, nucleotide sugar 96.9 0.002 6.9E-08 61.8 8.4 111 334-466 215-337 (339)
53 3tov_A Glycosyl transferase fa 96.5 0.093 3.2E-06 50.3 16.6 95 2-130 18-115 (349)
54 1psw_A ADP-heptose LPS heptosy 95.6 0.73 2.5E-05 43.7 18.3 94 3-130 11-106 (348)
55 2x0d_A WSAF; GT4 family, trans 93.4 0.24 8.4E-06 48.6 9.0 80 332-424 294-380 (413)
56 3vue_A GBSS-I, granule-bound s 93.3 1.7 6E-05 44.1 15.5 136 268-422 328-476 (536)
57 2gt1_A Lipopolysaccharide hept 91.0 9.9 0.00034 35.3 18.8 134 266-424 178-323 (326)
58 2p90_A Hypothetical protein CG 81.0 15 0.0005 34.3 11.5 191 266-478 102-314 (319)
59 2iz6_A Molybdenum cofactor car 80.2 25 0.00087 29.5 11.7 77 336-422 92-173 (176)
60 2wqk_A 5'-nucleotidase SURE; S 79.0 2.8 9.6E-05 37.7 5.6 26 8-35 16-41 (251)
61 3nb0_A Glycogen [starch] synth 76.0 6.3 0.00021 40.9 7.8 36 344-381 513-552 (725)
62 2phj_A 5'-nucleotidase SURE; S 74.2 5.7 0.0002 35.6 6.2 27 8-36 16-42 (251)
63 3pdi_B Nitrogenase MOFE cofact 74.1 11 0.00039 37.1 9.0 35 88-132 366-400 (458)
64 1o97_C Electron transferring f 72.9 14 0.0005 33.3 8.7 42 85-133 100-147 (264)
65 1uqt_A Alpha, alpha-trehalose- 68.1 25 0.00086 34.9 10.1 107 337-469 336-454 (482)
66 3dfz_A SIRC, precorrin-2 dehyd 68.0 12 0.0004 32.9 6.8 151 260-444 27-186 (223)
67 1efp_B ETF, protein (electron 65.5 20 0.00069 32.1 7.9 42 85-133 101-148 (252)
68 2pju_A Propionate catabolism o 59.1 16 0.00056 32.1 6.0 67 352-423 64-153 (225)
69 2q5c_A NTRC family transcripti 56.6 12 0.00042 32.1 4.7 69 350-423 50-141 (196)
70 3rg8_A Phosphoribosylaminoimid 56.5 82 0.0028 25.8 9.6 139 267-444 3-149 (159)
71 1j9j_A Stationary phase surviV 56.4 13 0.00046 33.1 5.0 27 8-36 15-41 (247)
72 4grd_A N5-CAIR mutase, phospho 54.8 91 0.0031 25.9 10.1 144 266-445 12-164 (173)
73 3t5t_A Putative glycosyltransf 52.7 1.8E+02 0.0062 28.7 28.0 113 334-470 353-474 (496)
74 3lyh_A Cobalamin (vitamin B12) 52.5 65 0.0022 24.9 8.1 38 265-302 5-42 (126)
75 1l5x_A SurviVal protein E; str 52.1 32 0.0011 31.3 6.8 27 8-36 15-41 (280)
76 3u7q_B Nitrogenase molybdenum- 51.8 79 0.0027 31.6 10.4 35 88-132 429-470 (523)
77 3ih5_A Electron transfer flavo 50.4 41 0.0014 29.3 7.1 41 85-132 79-122 (217)
78 3aek_B Light-independent proto 49.5 77 0.0026 31.7 9.9 35 88-132 340-374 (525)
79 2yvq_A Carbamoyl-phosphate syn 49.5 23 0.00078 28.6 5.0 86 7-130 37-130 (143)
80 1xmp_A PURE, phosphoribosylami 47.8 1.2E+02 0.004 25.1 10.7 144 266-445 11-163 (170)
81 3lp6_A Phosphoribosylaminoimid 45.9 1.3E+02 0.0044 25.0 10.9 140 266-445 7-157 (174)
82 3oow_A Phosphoribosylaminoimid 45.1 1.3E+02 0.0044 24.8 8.8 144 267-445 6-157 (166)
83 2q5c_A NTRC family transcripti 44.2 27 0.00092 29.8 4.9 119 4-137 36-172 (196)
84 1yt5_A Inorganic polyphosphate 43.1 18 0.00062 32.5 3.7 53 352-424 42-97 (258)
85 1qv9_A F420-dependent methylen 42.8 65 0.0022 28.3 6.8 42 87-135 54-101 (283)
86 1efv_B Electron transfer flavo 42.7 42 0.0014 30.0 6.1 42 85-133 104-151 (255)
87 3tov_A Glycosyl transferase fa 42.6 28 0.00097 32.7 5.2 31 7-38 204-234 (349)
88 4e5s_A MCCFLIKE protein (BA_56 41.6 37 0.0013 31.7 5.7 73 279-379 62-136 (331)
89 3u7q_A Nitrogenase molybdenum- 41.4 20 0.00068 35.7 4.0 35 87-131 407-441 (492)
90 2ozl_B PDHE1-B, pyruvate dehyd 40.9 1.6E+02 0.0054 27.5 10.1 17 406-422 324-340 (341)
91 3gi1_A LBP, laminin-binding pr 40.7 92 0.0032 28.2 8.2 80 20-132 177-258 (286)
92 1kjn_A MTH0777; hypotethical p 40.5 22 0.00075 28.7 3.3 32 7-39 23-54 (157)
93 1o4v_A Phosphoribosylaminoimid 39.4 1.7E+02 0.0058 24.5 12.7 142 266-445 13-163 (183)
94 3s2u_A UDP-N-acetylglucosamine 39.0 63 0.0022 30.4 7.1 38 266-305 3-40 (365)
95 1psw_A ADP-heptose LPS heptosy 39.0 76 0.0026 29.3 7.7 28 104-133 261-288 (348)
96 1qgu_B Protein (nitrogenase mo 38.9 1.5E+02 0.0052 29.5 10.1 34 88-131 425-465 (519)
97 3l4e_A Uncharacterized peptida 38.6 88 0.003 26.8 7.3 48 254-301 16-63 (206)
98 3pdi_A Nitrogenase MOFE cofact 38.2 19 0.00066 35.7 3.3 35 87-131 391-425 (483)
99 2pju_A Propionate catabolism o 36.6 31 0.0011 30.3 4.1 117 4-133 46-180 (225)
100 3to5_A CHEY homolog; alpha(5)b 36.3 67 0.0023 25.3 5.8 31 104-134 57-96 (134)
101 3sr3_A Microcin immunity prote 34.8 52 0.0018 30.8 5.6 73 279-379 63-137 (336)
102 1w85_B Pyruvate dehydrogenase 34.7 1.4E+02 0.0049 27.4 8.7 17 406-422 307-323 (324)
103 1g5t_A COB(I)alamin adenosyltr 34.7 1.7E+02 0.0058 24.8 8.3 29 2-31 38-66 (196)
104 2xdq_B Light-independent proto 34.4 38 0.0013 33.8 4.9 35 88-132 363-397 (511)
105 2lpm_A Two-component response 34.3 29 0.00098 27.1 3.2 29 104-132 53-86 (123)
106 4h1h_A LMO1638 protein; MCCF-l 32.7 59 0.002 30.3 5.6 27 279-305 62-88 (327)
107 2i2c_A Probable inorganic poly 32.4 24 0.00082 32.0 2.7 28 352-379 36-69 (272)
108 3iqw_A Tail-anchored protein t 32.0 1.4E+02 0.0048 27.7 8.1 29 2-31 26-54 (334)
109 1mio_B Nitrogenase molybdenum 31.9 38 0.0013 33.3 4.3 34 88-131 376-409 (458)
110 3l7i_A Teichoic acid biosynthe 30.7 78 0.0027 33.1 6.8 114 337-468 603-720 (729)
111 2gt1_A Lipopolysaccharide hept 30.7 74 0.0025 29.1 6.0 28 104-133 253-280 (326)
112 1pjq_A CYSG, siroheme synthase 30.6 1.9E+02 0.0066 28.1 9.2 147 266-444 13-168 (457)
113 1zl0_A Hypothetical protein PA 30.5 82 0.0028 29.1 6.1 74 279-380 64-139 (311)
114 1mio_A Nitrogenase molybdenum 29.8 48 0.0016 33.3 4.7 35 87-131 446-480 (533)
115 2uz1_A Benzaldehyde lyase; thi 28.9 60 0.0021 32.7 5.3 26 353-378 68-99 (563)
116 1ozh_A ALS, acetolactate synth 28.4 3E+02 0.01 27.5 10.5 27 352-378 74-106 (566)
117 2etv_A Iron(III) ABC transport 28.4 55 0.0019 30.6 4.6 36 90-132 89-125 (346)
118 3s40_A Diacylglycerol kinase; 28.0 1.8E+02 0.0061 26.5 8.0 29 352-380 64-98 (304)
119 1u0t_A Inorganic polyphosphate 27.8 33 0.0011 31.7 2.8 28 352-379 76-107 (307)
120 2an1_A Putative kinase; struct 27.3 35 0.0012 31.1 2.9 28 352-379 64-95 (292)
121 2vqe_B 30S ribosomal protein S 27.3 2.9E+02 0.0098 24.5 8.8 31 104-134 158-190 (256)
122 3av3_A Phosphoribosylglycinami 27.1 2.7E+02 0.0093 23.8 8.5 90 8-133 16-112 (212)
123 1v5e_A Pyruvate oxidase; oxido 27.0 3.3E+02 0.011 27.5 10.5 28 351-378 68-101 (590)
124 1rcu_A Conserved hypothetical 26.8 44 0.0015 28.5 3.3 33 346-379 115-150 (195)
125 3i6i_A Putative leucoanthocyan 26.7 2.9E+02 0.01 25.2 9.5 82 10-131 24-117 (346)
126 2gk4_A Conserved hypothetical 26.6 45 0.0015 29.4 3.4 22 9-31 32-53 (232)
127 3da8_A Probable 5'-phosphoribo 26.6 2.4E+02 0.0083 24.2 8.1 105 282-420 76-182 (215)
128 3cx3_A Lipoprotein; zinc-bindi 26.5 1.5E+02 0.0051 26.8 7.1 84 15-132 171-256 (284)
129 2h31_A Multifunctional protein 26.3 4.1E+02 0.014 25.6 10.2 139 266-444 265-412 (425)
130 2q28_A Oxalyl-COA decarboxylas 26.2 2.6E+02 0.009 27.9 9.6 26 353-378 72-103 (564)
131 3zzm_A Bifunctional purine bio 25.7 75 0.0026 31.4 5.0 93 8-121 22-118 (523)
132 4b4k_A N5-carboxyaminoimidazol 25.6 2.9E+02 0.01 23.0 12.4 143 266-445 22-174 (181)
133 2xvy_A Chelatase, putative; me 25.5 1.7E+02 0.0058 26.0 7.2 39 266-304 10-50 (269)
134 1meo_A Phosophoribosylglycinam 25.3 3.2E+02 0.011 23.3 8.6 69 285-380 69-137 (209)
135 1t35_A Hypothetical protein YV 25.2 2.1E+02 0.0071 24.1 7.3 43 336-379 82-135 (191)
136 2x0d_A WSAF; GT4 family, trans 25.2 19 0.00064 34.9 0.7 25 6-31 65-89 (413)
137 2w36_A Endonuclease V; hypoxan 25.1 61 0.0021 28.3 3.8 41 87-132 91-138 (225)
138 3goc_A Endonuclease V; alpha-b 25.0 77 0.0026 27.9 4.5 42 86-132 94-142 (237)
139 3afo_A NADH kinase POS5; alpha 24.9 62 0.0021 31.0 4.3 34 344-379 109-147 (388)
140 1pq4_A Periplasmic binding pro 24.7 3.8E+02 0.013 24.1 9.8 79 20-133 188-268 (291)
141 3av3_A Phosphoribosylglycinami 24.6 2.8E+02 0.0097 23.7 8.2 103 284-420 71-175 (212)
142 1eiw_A Hypothetical protein MT 24.5 93 0.0032 23.7 4.4 60 354-422 41-109 (111)
143 1ydh_A AT5G11950; structural g 24.2 30 0.001 30.1 1.8 44 335-379 89-143 (216)
144 2a33_A Hypothetical protein; s 24.1 2.2E+02 0.0075 24.5 7.3 43 336-379 94-147 (215)
145 2o1e_A YCDH; alpha-beta protei 24.0 1.6E+02 0.0056 26.9 6.9 84 15-132 184-269 (312)
146 4hn9_A Iron complex transport 23.9 54 0.0018 30.4 3.6 37 90-133 109-145 (335)
147 1t9b_A Acetolactate synthase, 23.5 2.7E+02 0.0092 28.7 9.2 27 352-378 146-178 (677)
148 3p9x_A Phosphoribosylglycinami 23.5 3.1E+02 0.011 23.5 8.1 104 283-420 69-174 (211)
149 2q6t_A DNAB replication FORK h 23.4 81 0.0028 30.6 5.0 34 1-34 209-242 (444)
150 2x7j_A 2-succinyl-5-enolpyruvy 23.1 3.8E+02 0.013 27.0 10.2 27 352-378 95-127 (604)
151 4ds3_A Phosphoribosylglycinami 23.0 2.4E+02 0.0084 24.1 7.4 104 283-420 74-179 (209)
152 4ehi_A Bifunctional purine bio 22.9 85 0.0029 31.1 4.7 37 8-52 36-72 (534)
153 3o1l_A Formyltetrahydrofolate 22.8 2.9E+02 0.0098 25.2 8.2 107 280-420 166-274 (302)
154 3m6m_D Sensory/regulatory prot 22.8 98 0.0034 24.0 4.6 31 104-134 58-99 (143)
155 2c31_A Oxalyl-COA decarboxylas 22.6 2.9E+02 0.01 27.6 9.1 26 353-378 74-105 (568)
156 3tla_A MCCF; serine protease, 22.5 89 0.0031 29.6 4.8 27 279-305 93-119 (371)
157 3ga2_A Endonuclease V; alpha-b 22.3 92 0.0031 27.5 4.5 42 86-132 96-144 (246)
158 3pfn_A NAD kinase; structural 22.3 48 0.0016 31.4 2.9 26 352-377 109-138 (365)
159 1pno_A NAD(P) transhydrogenase 22.2 86 0.0029 25.8 3.9 24 7-31 41-64 (180)
160 3lyu_A Putative hydrogenase; t 22.2 62 0.0021 25.7 3.2 24 6-31 30-53 (142)
161 3ia7_A CALG4; glycosysltransfe 22.0 3.1E+02 0.01 25.4 8.8 36 267-304 6-41 (402)
162 3md9_A Hemin-binding periplasm 22.0 68 0.0023 28.2 3.8 36 90-132 52-89 (255)
163 1p9o_A Phosphopantothenoylcyst 21.9 47 0.0016 30.7 2.7 22 9-31 68-89 (313)
164 3auf_A Glycinamide ribonucleot 21.5 3.2E+02 0.011 23.7 7.9 103 284-420 90-194 (229)
165 1d4o_A NADP(H) transhydrogenas 21.5 90 0.0031 25.8 3.9 24 7-31 40-63 (184)
166 3qjg_A Epidermin biosynthesis 21.4 72 0.0025 26.6 3.5 31 7-38 19-49 (175)
167 3h4t_A Glycosyltransferase GTF 21.0 2.7E+02 0.0091 26.2 8.1 36 268-305 3-38 (404)
168 3psh_A Protein HI_1472; substr 20.9 78 0.0027 29.1 4.1 37 90-133 77-114 (326)
169 1o4v_A Phosphoribosylaminoimid 20.9 3.7E+02 0.013 22.5 9.1 104 279-422 52-157 (183)
170 2lnd_A De novo designed protei 20.6 2.3E+02 0.0078 19.9 5.6 48 370-422 50-100 (112)
171 4dim_A Phosphoribosylglycinami 20.5 1.4E+02 0.0048 28.2 6.0 21 9-30 19-39 (403)
172 3sz8_A 2-dehydro-3-deoxyphosph 20.4 4.7E+02 0.016 23.5 12.0 18 287-304 126-143 (285)
173 3nrb_A Formyltetrahydrofolate 20.4 2.8E+02 0.0096 25.0 7.6 105 282-420 152-258 (287)
174 1jkx_A GART;, phosphoribosylgl 20.3 3.1E+02 0.011 23.4 7.6 103 284-420 68-172 (212)
175 3e35_A Uncharacterized protein 20.1 2.3E+02 0.0079 26.2 7.0 39 265-304 104-143 (325)
176 1ek6_A UDP-galactose 4-epimera 20.1 3.7E+02 0.013 24.3 8.8 19 10-29 16-34 (348)
177 3tqr_A Phosphoribosylglycinami 20.1 3.5E+02 0.012 23.2 7.8 103 284-420 72-176 (215)
178 2q8p_A Iron-regulated surface 20.1 66 0.0023 28.3 3.3 37 90-133 53-90 (260)
179 3ox4_A Alcohol dehydrogenase 2 20.0 2E+02 0.0067 27.3 6.8 98 254-381 20-140 (383)
180 3qrx_B Melittin; calcium-bindi 20.0 24 0.00082 18.6 0.1 17 360-376 1-17 (26)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.2e-63 Score=500.11 Aligned_cols=424 Identities=28% Similarity=0.423 Sum_probs=340.2
Q ss_pred CCCCChHHHHHHHHHHHhCCC--CEEEEEeCCcchhhhhhcCCC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHH
Q 042731 1 MAQGHIIPFLALARRLEETNK--YTITLVNTPLNLKKLKSSLPQ-NSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPK 77 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~G--h~Vt~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 77 (481)
|++||++|++.||+.|.+ +| +.|||++++.+..++.+.... ..+++|..+| ++++++.+...+ +...+..
T Consensus 22 p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~~~-~~~~~~~ 94 (454)
T 3hbf_A 22 PFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSSGN-PREPIFL 94 (454)
T ss_dssp CSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCCSC-TTHHHHH
T ss_pred CcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCccccCC-hHHHHHH
Confidence 799999999999999999 99 999999998766666443210 1579999887 577776554433 2222233
Q ss_pred HHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCC----
Q 042731 78 FLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRS---- 153 (481)
Q Consensus 78 ~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~---- 153 (481)
+... ..+.+++.++++..+... ++||||+|.+++|+..+|+++|||++.|++++++.++.+++.........
T Consensus 95 ~~~~---~~~~~~~~l~~~~~~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~ 170 (454)
T 3hbf_A 95 FIKA---MQENFKHVIDEAVAETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV 170 (454)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred HHHH---HHHHHHHHHHHHHhhcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence 3333 233444555443322222 78999999999999999999999999999999998887776543211100
Q ss_pred CCCCc-cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCCeeee
Q 042731 154 TDSDE-FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPI 232 (481)
Q Consensus 154 ~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v 232 (481)
..... ..+|++|. ++..+++.++.. ...+.+.+++.+..+....++++++||+++||+++++.+++.+ +++++|
T Consensus 171 ~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~v 245 (454)
T 3hbf_A 171 HDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNV 245 (454)
T ss_dssp TTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEEC
T ss_pred ccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEE
Confidence 01111 23788876 888888887654 4445677888888888999999999999999999999998775 789999
Q ss_pred cccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcc
Q 042731 233 GPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINS 312 (481)
Q Consensus 233 Gpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 312 (481)
||+...... +....+.++.+||+.++++++|||||||+...+.+++.+++.+++..+++|||+++...
T Consensus 246 GPl~~~~~~------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------ 313 (454)
T 3hbf_A 246 GPFNLTTPQ------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------ 313 (454)
T ss_dssp CCHHHHSCC------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------
T ss_pred CCccccccc------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------
Confidence 999864311 01223578999999998899999999999988899999999999999999999998651
Q ss_pred hhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHH
Q 042731 313 EFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEE 392 (481)
Q Consensus 313 ~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 392 (481)
. +.+|+++.++++ +++.+.+|+||.++|+|+++++|||||||||++|++++|||||++|+..||+.||+++++
T Consensus 314 -~---~~lp~~~~~~~~---~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~ 386 (454)
T 3hbf_A 314 -K---EKLPKGFLERTK---TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTES 386 (454)
T ss_dssp -H---HHSCTTHHHHTT---TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT
T ss_pred -h---hcCCHhHHhhcC---CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHH
Confidence 1 237888877764 456666999999999999999999999999999999999999999999999999999998
Q ss_pred HhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHH
Q 042731 393 EMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAAL 467 (481)
Q Consensus 393 ~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 467 (481)
.||+|+.+.. ..++++.|.++|+++|+++ ++++||+||+++++.+++++ .+|||+.+++++|++.+.
T Consensus 387 ~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 387 VLEIGVGVDN---GVLTKESIKKALELTMSSE-KGGIMRQKIVKLKESAFKAV----EQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TSCSEEECGG---GSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHHHHHHT
T ss_pred hhCeeEEecC---CCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHhh----ccCCCHHHHHHHHHHHHh
Confidence 6799999987 7899999999999999885 78899999999999999999 999999999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.8e-57 Score=462.11 Aligned_cols=438 Identities=29% Similarity=0.475 Sum_probs=323.2
Q ss_pred CCCCChHHHHHHHHHHHhCC-CCEEEEEeCCc--chhhhhhcCCC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchH
Q 042731 1 MAQGHIIPFLALARRLEETN-KYTITLVNTPL--NLKKLKSSLPQ-NSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFP 76 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~-Gh~Vt~~~~~~--~~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 76 (481)
|++||++|+++||++|++ + ||+|||++++. +...+++.... ..+++|+.++... ++. . . . ......
T Consensus 15 p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~-~--~-~-~~~~~~ 84 (480)
T 2vch_A 15 PGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD----LTD-L--S-S-STRIES 84 (480)
T ss_dssp SCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC----CTT-S--C-T-TCCHHH
T ss_pred cchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC----CCC-C--C-C-chhHHH
Confidence 689999999999999999 9 99999999887 44444431100 0678999888531 111 0 0 1 112223
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhccCCCCc-cEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhc---CCCC
Q 042731 77 KFLQASASLEPHFKKLISELVNEQNGQKP-LCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLN---LPHR 152 (481)
Q Consensus 77 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~p-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~---~p~~ 152 (481)
.+........+.+.++++++.. .. ++ ||||+|.++.|+..+|+++|||++.+++++++..+.+.+.+.. .+..
T Consensus 85 ~~~~~~~~~~~~l~~ll~~~~~--~~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 85 RISLTVTRSNPELRKVFDSFVE--GG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHH--TT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHhhhHHHHHHHHHhcc--CC-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 3444455666778888877531 11 67 9999999999999999999999999999998876665543321 1100
Q ss_pred CCC-CCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhc--CCCe
Q 042731 153 STD-SDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKF--GRPV 229 (481)
Q Consensus 153 ~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 229 (481)
..+ .....+|+++. ++..+++..+.. ........+......+..++++++|++.+|+++.+..+.+.. .+++
T Consensus 162 ~~~~~~~~~~Pg~~p---~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v 236 (480)
T 2vch_A 162 FRELTEPLMLPGCVP---VAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 236 (480)
T ss_dssp GGGCSSCBCCTTCCC---BCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCE
T ss_pred ccccCCcccCCCCCC---CChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcE
Confidence 000 01123455543 444555554422 112345555555667778889999999999998888776421 2689
Q ss_pred eeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCC--
Q 042731 230 WPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIG-- 307 (481)
Q Consensus 230 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~-- 307 (481)
++|||+....... .....+.++.+||+.++++++|||||||+...+.+++.+++.+++..+++|||+++....
T Consensus 237 ~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~ 311 (480)
T 2vch_A 237 YPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA 311 (480)
T ss_dssp EECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST
T ss_pred EEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccc
Confidence 9999998653110 001245789999999888899999999998888899999999999999999999986520
Q ss_pred ----CCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccch
Q 042731 308 ----FDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQ 383 (481)
Q Consensus 308 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ 383 (481)
++..++....+.+|+++.++++ +.++++.+|+||.+||+|++|++|||||||||++||+++|||||++|+..||
T Consensus 312 ~~~~~~~~~~~~~~~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 312 NSSYFDSHSQTDPLTFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp TTTTTCC--CSCGGGGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccchhhhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 0000000000238889988887 8888887799999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHH
Q 042731 384 FYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFL 463 (481)
Q Consensus 384 ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~ 463 (481)
+.||+++++.+|+|+.+...++..++++.|+++|+++|+++ ++++||+||+++++.+++++ .+|||+.+++++|+
T Consensus 390 ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~----~~gGss~~~~~~~v 464 (480)
T 2vch_A 390 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVL----KDDGTSTKALSLVA 464 (480)
T ss_dssp HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHHH
T ss_pred hHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHH----hcCCCHHHHHHHHH
Confidence 99999984355999999762223799999999999999865 55689999999999999988 89999999999999
Q ss_pred HHHHh
Q 042731 464 NAALI 468 (481)
Q Consensus 464 ~~~~~ 468 (481)
+.+++
T Consensus 465 ~~~~~ 469 (480)
T 2vch_A 465 LKWKA 469 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99976
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.7e-57 Score=466.16 Aligned_cols=436 Identities=25% Similarity=0.478 Sum_probs=321.7
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCC----C-CCeEEEEecCCCCCCCCCCCCCCCCCCCCCch
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQ----N-SSIHLLEIPFNSVEHDLPPCTENTDSIPYHLF 75 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 75 (481)
|++||++|++.||++|++ |||+|||++++.+...+.+.... . .+++|..++ ++++...... .. ...+
T Consensus 17 p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~~~-~~-~~~~ 88 (482)
T 2pq6_A 17 PVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEGDG-DV-SQDV 88 (482)
T ss_dssp SSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC-----------CCH
T ss_pred ccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCccccc-Cc-chhH
Confidence 789999999999999999 99999999998877666543110 0 378898887 2444311000 11 1223
Q ss_pred HHHHHHH-hhhhHHHHHHHHHHhhcc-CCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhh-----hc
Q 042731 76 PKFLQAS-ASLEPHFKKLISELVNEQ-NGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSML-----LN 148 (481)
Q Consensus 76 ~~~~~~~-~~~~~~~~~ll~~~~~~~-~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~-----~~ 148 (481)
..++... ..+.+.+.++++.+.... .. +|||||+|.++.|+..+|+++|||++.+++++++....+.+.+ .+
T Consensus 89 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
T 2pq6_A 89 PTLCQSVRKNFLKPYCELLTRLNHSTNVP-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 167 (482)
T ss_dssp HHHHHHHTTSSHHHHHHHHHHHHTCSSSC-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccCC-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCC
Confidence 4445444 556677888888764210 12 7999999999999999999999999999999887665543222 23
Q ss_pred CCCCCCC--CC---c---cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHH
Q 042731 149 LPHRSTD--SD---E---FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMY 220 (481)
Q Consensus 149 ~p~~~~~--~~---~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 220 (481)
.|..... .. + ..+|+++. ++..+++.++........+.+.+....+....++++++|++++||+++++.
T Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 168 IPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 3322110 00 1 12344443 444555555433322344555555556677788999999999999999999
Q ss_pred HHhhcCCCeeeecccccC-cccc--c---cccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhc
Q 042731 221 FKRKFGRPVWPIGPVLLS-TESR--A---GARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEAS 294 (481)
Q Consensus 221 ~~~~~~~~~~~vGpl~~~-~~~~--~---~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~ 294 (481)
+++.+ +++++|||+... .... . ....+.+..+.++.+||+.++++++|||||||+...+.+++.+++.+++..
T Consensus 245 ~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 98877 889999999753 2110 0 000011123456899999988889999999999877888899999999999
Q ss_pred CCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcE
Q 042731 295 GKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPI 374 (481)
Q Consensus 295 ~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~ 374 (481)
+.+|||+++... ..++. ..+|+++.+++ ++|+.+.+|+||.++|+|+++++|||||||||++|++++|||+
T Consensus 324 ~~~~l~~~~~~~---~~~~~---~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~ 394 (482)
T 2pq6_A 324 KKSFLWIIRPDL---VIGGS---VIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPM 394 (482)
T ss_dssp TCEEEEECCGGG---STTTG---GGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred CCcEEEEEcCCc---ccccc---ccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCE
Confidence 999999997541 00011 12677777665 4577778999999999999999999999999999999999999
Q ss_pred EecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCc
Q 042731 375 IGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGS 454 (481)
Q Consensus 375 l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs 454 (481)
|++|+..||+.||+++++.+|+|+.+.. .++++.|.++|+++|+|+ ++++||+||+++++.+++++ .+|||
T Consensus 395 i~~P~~~dQ~~na~~~~~~~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGs 465 (482)
T 2pq6_A 395 LCWPFFADQPTDCRFICNEWEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEENT----RPGGC 465 (482)
T ss_dssp EECCCSTTHHHHHHHHHHTSCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHT----STTCH
T ss_pred EecCcccchHHHHHHHHHHhCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHH----hcCCc
Confidence 9999999999999999744499999974 689999999999999987 46789999999999999998 99999
Q ss_pred hHHHHHHHHHHHH
Q 042731 455 SVKAMDQFLNAAL 467 (481)
Q Consensus 455 ~~~~~~~~~~~~~ 467 (481)
+.+++++|++.++
T Consensus 466 s~~~l~~~v~~~~ 478 (482)
T 2pq6_A 466 SYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9.3e-56 Score=449.00 Aligned_cols=426 Identities=25% Similarity=0.392 Sum_probs=314.9
Q ss_pred CCCCChHHHHHHHHHHHhCCCC--EEEEEeCCcchhhhhhcCCC--CCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchH
Q 042731 1 MAQGHIIPFLALARRLEETNKY--TITLVNTPLNLKKLKSSLPQ--NSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFP 76 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh--~Vt~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 76 (481)
|++||++|+++||+.|++ +|| .|||++++.....+.+...+ ..+++|+.++ ++++++.+.. ......+.
T Consensus 16 p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~~~-~~~~~~~~ 88 (456)
T 2c1x_A 16 PFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYVFA-GRPQEDIE 88 (456)
T ss_dssp CSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCCCC-CCTTHHHH
T ss_pred cccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCccccc-CChHHHHH
Confidence 789999999999999999 865 56889887554444332110 0478888776 3455443221 11222122
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhh------hcCC
Q 042731 77 KFLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSML------LNLP 150 (481)
Q Consensus 77 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~------~~~p 150 (481)
.+... ..+.+.++++++..+... +|||||+|.++.|+..+|+++|||+|.+++++++....+.+.. ...+
T Consensus 89 ~~~~~---~~~~~~~~l~~l~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 89 LFTRA---APESFRQGMVMAVAETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHH---hHHHHHHHHHHHHhccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 22222 223444455443221112 8999999999999999999999999999999877665443221 1111
Q ss_pred CCCCCCCc-cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCCe
Q 042731 151 HRSTDSDE-FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRPV 229 (481)
Q Consensus 151 ~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 229 (481)
........ ..+|+++. ++..+++..+........+.+.+.+.......++++++|++++||+++++.+++.+ +++
T Consensus 165 ~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~ 240 (456)
T 2c1x_A 165 IQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTY 240 (456)
T ss_dssp CTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCE
T ss_pred cccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCE
Confidence 00001111 23567664 55666655433222223455555555566778899999999999999988888776 689
Q ss_pred eeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 042731 230 WPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFD 309 (481)
Q Consensus 230 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 309 (481)
++|||+....... ....+.++.+||+.++++++|||||||+.....+++.+++.+++..+.+|||+++...
T Consensus 241 ~~vGpl~~~~~~~------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~--- 311 (456)
T 2c1x_A 241 LNIGPFNLITPPP------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA--- 311 (456)
T ss_dssp EECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG---
T ss_pred EEecCcccCcccc------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc---
Confidence 9999997543110 0122356899999988899999999999887888999999999999999999997541
Q ss_pred CcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHH
Q 042731 310 INSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKL 389 (481)
Q Consensus 310 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~ 389 (481)
. +.+|+++.+++ ++++.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+..||+.||++
T Consensus 312 ----~---~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~ 381 (456)
T 2c1x_A 312 ----R---VHLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRM 381 (456)
T ss_dssp ----G---GGSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred ----h---hhCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHH
Confidence 1 23777776654 4567777999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHh
Q 042731 390 LEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALI 468 (481)
Q Consensus 390 v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 468 (481)
+++.||+|+.+.. ..++++.|.++|+++|+|+ ++++||+||+++++.+++++ .+|||+.+++++|++.+++
T Consensus 382 l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 382 VEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAV----GPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHT----STTCHHHHHHHHHHHHHTS
T ss_pred HHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhh----hcCCcHHHHHHHHHHHHHh
Confidence 9987899999987 7899999999999999987 47789999999999999999 9999999999999998843
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.3e-55 Score=445.25 Aligned_cols=420 Identities=28% Similarity=0.455 Sum_probs=317.2
Q ss_pred CCCCChHHHHHHHHHHHhCC--CCEEEEEeCCcch-----hhhhh--cCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCC
Q 042731 1 MAQGHIIPFLALARRLEETN--KYTITLVNTPLNL-----KKLKS--SLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIP 71 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~--Gh~Vt~~~~~~~~-----~~i~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 71 (481)
|++||++|+++||+.|++ + ||+|||++++.+. +.+.+ ... .+++|..+|.. .++. .+....
T Consensus 18 p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~--~~i~~~~lp~~----~~~~-~~~~~~-- 87 (463)
T 2acv_A 18 PGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVLASQ--PQIQLIDLPEV----EPPP-QELLKS-- 87 (463)
T ss_dssp SSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHHCSC--TTEEEEECCCC----CCCC-GGGGGS--
T ss_pred cccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcccCC--CCceEEECCCC----CCCc-ccccCC--
Confidence 789999999999999999 8 9999999998652 22322 111 57999988843 1221 110000
Q ss_pred CCchHHHHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCC
Q 042731 72 YHLFPKFLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPH 151 (481)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~ 151 (481)
.. .. +...+....+.++++++++. .. +|||||+|.++.|+..+|+++|||++.+++++++....+.+.+.....
T Consensus 88 ~~-~~-~~~~~~~~~~~~~~ll~~~~---~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 88 PE-FY-ILTFLESLIPHVKATIKTIL---SN-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp HH-HH-HHHHHHHTHHHHHHHHHHHC---CT-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cc-HH-HHHHHHhhhHHHHHHHHhcc---CC-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 01 11 44555566677888888741 11 799999999999999999999999999999998877766655432200
Q ss_pred CC-CC-CC---ccccCCC-CCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhc
Q 042731 152 RS-TD-SD---EFLLPDF-PEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKF 225 (481)
Q Consensus 152 ~~-~~-~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 225 (481)
.. .. .. ...+|++ +. ++..+++..+... ......+......+..++++++|++.+|++++.+.+.+..
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 162 EVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp CCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred CCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 00 00 11 2335666 43 5555555554432 2355555555667778889999999999999888877755
Q ss_pred --CCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccc-ccCHHHHHHHHHHHHhcCCceEEEE
Q 042731 226 --GRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQN-TIAASQMMQLAMALEASGKNFIWVV 302 (481)
Q Consensus 226 --~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~ 302 (481)
++++++|||+........ . ...+..+.++.+||+.++++++|||||||+. ..+.+++.+++.+++..+.+|||++
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~-~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 313 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPN-P-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSN 313 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCB-T-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccCCcEEEeCCCcccccccc-c-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 578999999986531000 0 0001235689999999888999999999998 7788889999999999999999999
Q ss_pred cCCCCCCCcchhhhcCCCchhHHHHh--ccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccc
Q 042731 303 RPPIGFDINSEFKANKWLPRGFEERI--KCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLA 380 (481)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~ 380 (481)
+.+. +.+|+++.+++ + + ++.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+.
T Consensus 314 ~~~~-----------~~l~~~~~~~~~~~--~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 314 SAEK-----------KVFPEGFLEWMELE--G-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp CCCG-----------GGSCTTHHHHHHHH--C-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCCc-----------ccCChhHHHhhccC--C-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 8631 12677777665 4 4 45566899999999999999999999999999999999999999999
Q ss_pred cchhhhHHHH-HHHhcceEEe-eccCCc--ccCHHHHHHHHHHHhc-CChhhHHHHHHHHHHHHHHHHHhhcccCCCCch
Q 042731 381 AEQFYNSKLL-EEEMGVCVEI-ARGMSC--EVLKEDLSAKIELVMN-ETEKGTDLRNKANEVKVIIKNAVRNETNFKGSS 455 (481)
Q Consensus 381 ~DQ~~na~~v-~~~lG~G~~~-~~~~~~--~~~~~~l~~~i~~vl~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~ 455 (481)
.||+.||+++ ++. |+|+.+ ..++.. .++++.|.++|+++|+ ++ +||+||+++++.+++++ .+|||+
T Consensus 380 ~dQ~~Na~~lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~----~~gGss 450 (463)
T 2acv_A 380 AEQQLNAFRLVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAV----VDGGSS 450 (463)
T ss_dssp TTHHHHHHHHHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHT----STTSHH
T ss_pred hhhHHHHHHHHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHH----hcCCcH
Confidence 9999999996 655 999999 311114 6899999999999997 35 79999999999999998 999999
Q ss_pred HHHHHHHHHHHH
Q 042731 456 VKAMDQFLNAAL 467 (481)
Q Consensus 456 ~~~~~~~~~~~~ 467 (481)
.+++++|++.++
T Consensus 451 ~~~l~~~v~~~~ 462 (463)
T 2acv_A 451 LISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.8e-41 Score=338.55 Aligned_cols=390 Identities=19% Similarity=0.196 Sum_probs=257.8
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHH---
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPK--- 77 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--- 77 (481)
|++||++|+++||++|++ +||+|+|++++.+.+.+++ .|++|..++. .++........... ....
T Consensus 21 ~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~ 88 (424)
T 2iya_A 21 PGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA-----AGATPVVYDS-----ILPKESNPEESWPE-DQESAMG 88 (424)
T ss_dssp SCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCEEEECCC-----CSCCTTCTTCCCCS-SHHHHHH
T ss_pred CCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEecCc-----cccccccchhhcch-hHHHHHH
Confidence 578999999999999999 9999999999999888887 6788887663 12221111000111 1111
Q ss_pred -HHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCC
Q 042731 78 -FLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDS 156 (481)
Q Consensus 78 -~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~ 156 (481)
+........+.+.+++++. +||+||+|.++.|+..+|+++|||++.+.+.+.........+....+.....+
T Consensus 89 ~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (424)
T 2iya_A 89 LFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRG 161 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC---
T ss_pred HHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccccccc
Confidence 1222223344445555555 89999999988899999999999999998765311100000100000000000
Q ss_pred CccccC-CCCCCCccccCccChhhhcCCCCChHHHHHHH------HHHhhccCceEEEccchhhhhhHHHHHHhhcCCCe
Q 042731 157 DEFLLP-DFPEASTLHVTQISPYLRATDGSDSFSVFYKK------LLLLWKDADGILVNTVEELDKIGLMYFKRKFGRPV 229 (481)
Q Consensus 157 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 229 (481)
.....| +.... ............. ...+.+...+ .......++.++.++..+++++. ..+++++
T Consensus 162 ~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-----~~~~~~~ 232 (424)
T 2iya_A 162 EEAAAPAGTGDA--EEGAEAEDGLVRF--FTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-----DTVGDNY 232 (424)
T ss_dssp --------------------HHHHHHH--HHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG-----GGCCTTE
T ss_pred cccccccccccc--hhhhccchhHHHH--HHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc-----cCCCCCE
Confidence 000000 00000 0000000000000 0001111110 00111246678889998887652 4577899
Q ss_pred eeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 042731 230 WPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFD 309 (481)
Q Consensus 230 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 309 (481)
++|||+.... ....+|++..+++++|||++||+.....+.+..++++++..+.+++|+++...
T Consensus 233 ~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--- 295 (424)
T 2iya_A 233 TFVGPTYGDR--------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV--- 295 (424)
T ss_dssp EECCCCCCCC--------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS---
T ss_pred EEeCCCCCCc--------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC---
Confidence 9999976432 11346777666678999999999865678888999999988889999887642
Q ss_pred CcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHH
Q 042731 310 INSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKL 389 (481)
Q Consensus 310 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~ 389 (481)
..+.+ ...+.|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||.+
T Consensus 296 ----------~~~~~----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 296 ----------DPADL----GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAER 359 (424)
T ss_dssp ----------CGGGG----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred ----------ChHHh----ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHH
Confidence 00111 001568899999999999999886 99999999999999999999999999999999999
Q ss_pred HHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHH
Q 042731 390 LEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAAL 467 (481)
Q Consensus 390 v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 467 (481)
+++. |+|+.+.. ..++++.|.++|+++|+|+ +++++++++++.++ ..+| ..++++.+.+.+.
T Consensus 360 l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~~ 421 (424)
T 2iya_A 360 IVEL-GLGRHIPR---DQVTAEKLREAVLAVASDP----GVAERLAAVRQEIR-------EAGG-ARAAADILEGILA 421 (424)
T ss_dssp HHHT-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCH-HHHHHHHHHHHHH
T ss_pred HHHC-CCEEEcCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCc-HHHHHHHHHHHHh
Confidence 9976 99999987 6789999999999999998 89999999999987 4455 5566665555543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.2e-40 Score=333.95 Aligned_cols=351 Identities=15% Similarity=0.155 Sum_probs=221.3
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCC--CCCCCCCCCCCC--CCchH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHD--LPPCTENTDSIP--YHLFP 76 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~--~~~~~ 76 (481)
|++||++|+++||++|++ +||+|||++++.+.+.. . .++.+..+........ .+.......... .....
T Consensus 31 p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (400)
T 4amg_A 31 PGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVA-E-----AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEGLGEG 103 (400)
T ss_dssp SSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHH-T-----TTCEEEESSTTCCSHHHHSCCC------------CHH
T ss_pred CchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHH-h-----cCCeeEecCCchhHhhhccccccccccccchhhhhHH
Confidence 688999999999999999 99999999998876544 4 5566665542111000 000000000000 00011
Q ss_pred H----HHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCC
Q 042731 77 K----FLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHR 152 (481)
Q Consensus 77 ~----~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~ 152 (481)
. +........+.+.++++++ +||+||+|.+++++..+|+.+|||++.+...+..........
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~------- 169 (400)
T 4amg_A 104 FFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL------- 169 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH-------
Confidence 1 1122233445566777888 999999999999999999999999998765432211111000
Q ss_pred CCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhh----ccCceE-EEccchhhhhhHHHHHHhhcCC
Q 042731 153 STDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLW----KDADGI-LVNTVEELDKIGLMYFKRKFGR 227 (481)
Q Consensus 153 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 227 (481)
..+......... ...... +......+... .......+
T Consensus 170 -----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 211 (400)
T 4amg_A 170 -----------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL---LPEDRRSP 211 (400)
T ss_dssp -----------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT---SCGGGCCT
T ss_pred -----------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhcc---CcccccCC
Confidence 000000000100 001111 11111111000 00000011
Q ss_pred CeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccC--HHHHHHHHHHHHhcCCceEEEEcCC
Q 042731 228 PVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIA--ASQMMQLAMALEASGKNFIWVVRPP 305 (481)
Q Consensus 228 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~ 305 (481)
....+.+... .....+.+|++..+++++|||||||+.... .+.+..++++++..+..++|..+..
T Consensus 212 ~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 278 (400)
T 4amg_A 212 GAWPMRYVPY-------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG 278 (400)
T ss_dssp TCEECCCCCC-------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT
T ss_pred cccCcccccc-------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence 2222222211 123345568888888999999999987533 3667889999999999999998765
Q ss_pred CCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhh
Q 042731 306 IGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFY 385 (481)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~ 385 (481)
. ......+ ++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+..||+.
T Consensus 279 ~-----------~~~~~~~-------~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~ 338 (400)
T 4amg_A 279 D-----------LALLGEL-------PANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDT 338 (400)
T ss_dssp C-----------CCCCCCC-------CTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHH
T ss_pred c-----------ccccccC-------CCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHH
Confidence 2 0011111 568899999999999999775 9999999999999999999999999999999
Q ss_pred hHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHH
Q 042731 386 NSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFL 463 (481)
Q Consensus 386 na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~ 463 (481)
||.++++. |+|+.++. .++++ ++|+++|+|+ +||+||++++++++ +..| ..++++.+.
T Consensus 339 na~~v~~~-G~g~~l~~---~~~~~----~al~~lL~d~----~~r~~a~~l~~~~~-------~~~~-~~~~a~~le 396 (400)
T 4amg_A 339 NRDVLTGL-GIGFDAEA---GSLGA----EQCRRLLDDA----GLREAALRVRQEMS-------EMPP-PAETAAXLV 396 (400)
T ss_dssp HHHHHHHH-TSEEECCT---TTCSH----HHHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHH
T ss_pred HHHHHHHC-CCEEEcCC---CCchH----HHHHHHHcCH----HHHHHHHHHHHHHH-------cCCC-HHHHHHHHH
Confidence 99999977 99999987 66665 5677899999 89999999999998 4465 445554443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.6e-39 Score=325.93 Aligned_cols=357 Identities=15% Similarity=0.086 Sum_probs=234.3
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQ 80 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 80 (481)
|+.||++|+++||++|++ +||+|+|++++.+.+.+.+ .+++++.++... .+.+. .. .. .. ...+..
T Consensus 9 ~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~-~~~~~-~~---~~-~~--~~~~~~ 74 (415)
T 1iir_A 9 GSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE-----VGVPHVPVGPSA-RAPIQ-RA---KP-LT--AEDVRR 74 (415)
T ss_dssp SCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEECCC---------CC---SC-CC--HHHHHH
T ss_pred CCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCH-HHHhh-cc---cc-cc--hHHHHH
Confidence 578999999999999999 9999999999988877877 778888887431 11110 00 00 00 011111
Q ss_pred HHhhh-hHHHHHHHH-HHhhccCCCCccEEEeCC-CCch--HHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCC
Q 042731 81 ASASL-EPHFKKLIS-ELVNEQNGQKPLCIITDT-FLGW--CKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTD 155 (481)
Q Consensus 81 ~~~~~-~~~~~~ll~-~~~~~~~~~~pD~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (481)
..... ...+.++++ .. +||+||+|. ++.| +..+|+++|||++.+.+++.+.. ..+.|....
T Consensus 75 ~~~~~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~------~~~~p~~~~- 140 (415)
T 1iir_A 75 FTTEAIATQFDEIPAAAE-------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP------SPYYPPPPL- 140 (415)
T ss_dssp HHHHHHHHHHHHHHHHTT-------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSSCCCC--
T ss_pred HHHHHHHHHHHHHHHHhc-------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC------CcccCCccC-
Confidence 11111 222233332 22 899999997 5668 89999999999999987653311 111110000
Q ss_pred CCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHh------------hccCceEEEccchhhhh-hHHHHHH
Q 042731 156 SDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLL------------WKDADGILVNTVEELDK-IGLMYFK 222 (481)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~-~~~~~~~ 222 (481)
+ . .++.. .....+...+........+...+...... .... .++.++.+.+++ + +
T Consensus 141 ~--~---~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~ 207 (415)
T 1iir_A 141 G--E---PSTQD--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----P 207 (415)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----C
T ss_pred C--c---cccch--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----c
Confidence 0 0 00000 00000000000000000000001111111 1122 468888888875 3 1
Q ss_pred hhcCCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEE
Q 042731 223 RKFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVV 302 (481)
Q Consensus 223 ~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 302 (481)
..+ ++++|||+.... ....+.++.+||+.. +++|||++||+. ...+.+..++++++..+.+++|++
T Consensus 208 ~~~--~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~ 273 (415)
T 1iir_A 208 TDL--DAVQTGAWILPD---------ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSR 273 (415)
T ss_dssp CSS--CCEECCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECT
T ss_pred ccC--CeEeeCCCccCc---------ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEe
Confidence 223 789999987653 123467889999876 468999999997 567778889999999999999998
Q ss_pred cCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccc
Q 042731 303 RPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAE 382 (481)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~D 382 (481)
+... ... ... ++|+.+.+|+||.++|+.++ +||||||+||++||+++|||+|++|...|
T Consensus 274 g~~~-----------~~~-~~~-------~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 332 (415)
T 1iir_A 274 GWAD-----------LVL-PDD-------GADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMAD 332 (415)
T ss_dssp TCTT-----------CCC-SSC-------GGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CCCc-----------ccc-cCC-------CCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCc
Confidence 7652 001 000 45788999999999996655 59999999999999999999999999999
Q ss_pred hhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 042731 383 QFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIK 442 (481)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~ 442 (481)
|+.||.++++. |+|+.++. ..++++.|.++|+++ +|+ +|+++++++++.++
T Consensus 333 Q~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 333 QPYYAGRVAEL-GVGVAHDG---PIPTFDSLSAALATA-LTP----ETHARATAVAGTIR 383 (415)
T ss_dssp HHHHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHC-CCcccCCc---CCCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh
Confidence 99999999977 99999987 678999999999999 888 89999999998874
No 9
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.5e-37 Score=308.30 Aligned_cols=363 Identities=16% Similarity=0.115 Sum_probs=244.3
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQ 80 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 80 (481)
++.||++|+++||++|++ +||+|+|++++.+.+.+++ .|++|..++.+.. .+ .... ..........+..
T Consensus 9 gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~--~~-~~~~--~~~~~~~~~~~~~ 77 (404)
T 3h4t_A 9 GSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE-----VGVPMVPVGRAVR--AG-AREP--GELPPGAAEVVTE 77 (404)
T ss_dssp SSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSS--GG-GSCT--TCCCTTCGGGHHH
T ss_pred CCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHH--HH-hccc--cCCHHHHHHHHHH
Confidence 367999999999999999 9999999999999999998 7788888774311 11 0000 0001111122222
Q ss_pred HHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchH---HHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCCC
Q 042731 81 ASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWC---KETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSD 157 (481)
Q Consensus 81 ~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (481)
.+....+. +. .... +||+||+|.....+ ..+|+++|||++.+..++....+.
T Consensus 78 ~~~~~~~~---l~-~~~~-----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~---------------- 132 (404)
T 3h4t_A 78 VVAEWFDK---VP-AAIE-----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE---------------- 132 (404)
T ss_dssp HHHHHHHH---HH-HHHT-----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG----------------
T ss_pred HHHHHHHH---HH-HHhc-----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh----------------
Confidence 22222222 22 2211 79999998665544 789999999999888766421000
Q ss_pred ccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhc-----------cCceEEEccchhhhhhHHHHHHhhcC
Q 042731 158 EFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWK-----------DADGILVNTVEELDKIGLMYFKRKFG 226 (481)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~ 226 (481)
.+ + ..+..........+.+.+.+....+. ..+..+.+..+.+.+. +.++
T Consensus 133 -----~~------~---~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~~~ 192 (404)
T 3h4t_A 133 -----QS------Q---AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RPTD 192 (404)
T ss_dssp -----SC------H---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CTTC
T ss_pred -----hH------H---HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CCCC
Confidence 00 0 00000000000000001111000000 0112233444444433 2456
Q ss_pred CCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCC
Q 042731 227 RPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPI 306 (481)
Q Consensus 227 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 306 (481)
+++.++|++..+. ....++++.+|++.. +++|||++||+.. ..+.+..++++++..+.++||+++...
T Consensus 193 ~~~~~~G~~~~~~---------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 193 LGTVQTGAWILPD---------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp CSCCBCCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred CCeEEeCccccCC---------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 7889999876543 134567888999854 5689999999986 667788899999999999999987652
Q ss_pred CCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhh
Q 042731 307 GFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYN 386 (481)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n 386 (481)
..... .+.|+.+.+|+|+.++|+++++ ||||||+||++||+++|||+|++|+..||+.|
T Consensus 261 -----------~~~~~--------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~n 319 (404)
T 3h4t_A 261 -----------LGRID--------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYY 319 (404)
T ss_dssp -----------CCCSS--------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred -----------ccccc--------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHH
Confidence 00111 0568899999999999988665 99999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHH
Q 042731 387 SKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAA 466 (481)
Q Consensus 387 a~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 466 (481)
|.++++. |+|+.+.. ..++++.|.++|+++++ + +|+++++++++.++ . +| ..++++.+.+.+
T Consensus 320 a~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~-------~-~~-~~~~~~~i~~~~ 381 (404)
T 3h4t_A 320 AGRVADL-GVGVAHDG---PTPTVESLSAALATALT-P----GIRARAAAVAGTIR-------T-DG-TTVAAKLLLEAI 381 (404)
T ss_dssp HHHHHHH-TSEEECSS---SSCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC-------C-CH-HHHHHHHHHHHH
T ss_pred HHHHHHC-CCEeccCc---CCCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh-------h-hH-HHHHHHHHHHHH
Confidence 9999977 99999987 78899999999999998 8 89999999999885 4 33 566666666665
Q ss_pred Hhhh
Q 042731 467 LIMR 470 (481)
Q Consensus 467 ~~~~ 470 (481)
+..+
T Consensus 382 ~~~~ 385 (404)
T 3h4t_A 382 SRQR 385 (404)
T ss_dssp HC--
T ss_pred hhCC
Confidence 5443
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.8e-38 Score=315.73 Aligned_cols=375 Identities=15% Similarity=0.078 Sum_probs=245.8
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQ 80 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 80 (481)
++.||++|+++||++|++ +||+|+|++++.+.+.+.+ .|+++..++... .+.+.. . ... .. ...+..
T Consensus 9 ~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~-~~~~~~-~--~~~-~~--~~~~~~ 75 (416)
T 1rrv_A 9 GTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQ-HMMLQE-G--MPP-PP--PEEEQR 75 (416)
T ss_dssp SCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCCEEECSCCG-GGCCCT-T--SCC-CC--HHHHHH
T ss_pred CCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCH-HHHHhh-c--ccc-ch--hHHHHH
Confidence 578999999999999999 9999999999988888887 678888877431 111111 0 000 00 011111
Q ss_pred HHhhhhHHHHHHHHHHhhccCCCCccEEEeCC-CCch--HHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCCC
Q 042731 81 ASASLEPHFKKLISELVNEQNGQKPLCIITDT-FLGW--CKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSD 157 (481)
Q Consensus 81 ~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (481)
..... +.++++.+... .. +||+||+|. +.++ +..+|+++|||++.+.+.+.+.. ..+.| ...+
T Consensus 76 ~~~~~---~~~~~~~l~~~-~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------~~~~p--~~~~- 141 (416)
T 1rrv_A 76 LAAMT---VEMQFDAVPGA-AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------SPHLP--PAYD- 141 (416)
T ss_dssp HHHHH---HHHHHHHHHHH-TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSSC--CCBC-
T ss_pred HHHHH---HHHHHHHHHHH-hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------CcccC--CCCC-
Confidence 11111 12222222210 11 899999996 3456 88999999999999877653210 01111 0000
Q ss_pred cccc-CC-CCCCCccccCccChhhhcCCCCChHHHHHHHHH------------HhhccCceEEEccchhhhhhHHHHHHh
Q 042731 158 EFLL-PD-FPEASTLHVTQISPYLRATDGSDSFSVFYKKLL------------LLWKDADGILVNTVEELDKIGLMYFKR 223 (481)
Q Consensus 158 ~~~~-p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~ 223 (481)
... ++ +.+ .+...+........+........ +..... .+++++.++++++. .
T Consensus 142 -~~~~~~r~~n-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~ 207 (416)
T 1rrv_A 142 -EPTTPGVTDI-------RVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ-----P 207 (416)
T ss_dssp -SCCCTTCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC-----S
T ss_pred -CCCCchHHHH-------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC-----C
Confidence 000 11 000 00000000000000000011111 111222 57888888887541 2
Q ss_pred hcCCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccc-cCHHHHHHHHHHHHhcCCceEEEE
Q 042731 224 KFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVV 302 (481)
Q Consensus 224 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~ 302 (481)
.+ ++++|||+.... ....+.++.+|++.. +++|||++||+.. ...+.+..++++++..+.+++|++
T Consensus 208 ~~--~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~ 274 (416)
T 1rrv_A 208 DV--DAVQTGAWLLSD---------ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSR 274 (416)
T ss_dssp SC--CCEECCCCCCCC---------CCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CC--CeeeECCCccCc---------cCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEe
Confidence 22 789999987653 123467888999876 4689999999964 345678889999999999999998
Q ss_pred cCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccc
Q 042731 303 RPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAE 382 (481)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~D 382 (481)
+... ... .. .+.|+.+.+|+||.++|+.++ +||||||+||++||+++|||+|++|...|
T Consensus 275 g~~~-----------~~~-~~-------~~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 333 (416)
T 1rrv_A 275 GWTE-----------LVL-PD-------DRDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTD 333 (416)
T ss_dssp TTTT-----------CCC-SC-------CCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBT
T ss_pred CCcc-----------ccc-cC-------CCCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEccCCCC
Confidence 7652 001 10 156888999999999997766 59999999999999999999999999999
Q ss_pred hhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHH
Q 042731 383 QFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQF 462 (481)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~ 462 (481)
|+.||.++++. |+|+.+.. ..++++.|.++|+++ +|+ +|+++++++++.++ ..+| . ++++.+
T Consensus 334 Q~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~~~~-~-~~~~~i 395 (416)
T 1rrv_A 334 QPYFAGRVAAL-GIGVAHDG---PTPTFESLSAALTTV-LAP----ETRARAEAVAGMVL-------TDGA-A-AAADLV 395 (416)
T ss_dssp HHHHHHHHHHH-TSEEECSS---SCCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC-------CCHH-H-HHHHHH
T ss_pred cHHHHHHHHHC-CCccCCCC---CCCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh-------hcCc-H-HHHHHH
Confidence 99999999977 99999987 678999999999999 888 89999999998875 3344 4 666666
Q ss_pred HHHHHh
Q 042731 463 LNAALI 468 (481)
Q Consensus 463 ~~~~~~ 468 (481)
++.+.+
T Consensus 396 ~e~~~~ 401 (416)
T 1rrv_A 396 LAAVGR 401 (416)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 255444
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.9e-37 Score=310.98 Aligned_cols=367 Identities=14% Similarity=0.142 Sum_probs=251.4
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCC---CCCCCCCCchHH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTE---NTDSIPYHLFPK 77 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~ 77 (481)
++.||++|+++||++|++ +||+|+|++++.+.+.+++ .++++..++.+ ++.... .........+..
T Consensus 29 ~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 97 (415)
T 3rsc_A 29 ASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE-----IIDADAAEVFGSDDLGVRPHL 97 (415)
T ss_dssp SCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCS-----TTTCCHHHHHHSSSSCHHHHH
T ss_pred CCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----cCCEEEecccc-----ccccccchhhccccHHHHHHH
Confidence 468999999999999999 9999999999999999988 77888887742 111000 000011111111
Q ss_pred -HHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeC-CCCchHHHHHHHhCCceEEEechhHHHHH--HHHHhhhcCCCCC
Q 042731 78 -FLQASASLEPHFKKLISELVNEQNGQKPLCIITD-TFLGWCKETAQEYGIFHAIFIGGGGFGFA--CLYSMLLNLPHRS 153 (481)
Q Consensus 78 -~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~~~~~~~p~~~ 153 (481)
+........+.+.++++++ +||+||+| +...++..+|+++|||++.+.+....... .........
T Consensus 98 ~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~---- 166 (415)
T 3rsc_A 98 MYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLA---- 166 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccccccccc----
Confidence 2222233445556666666 99999999 77778999999999999987743210000 000000000
Q ss_pred CCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHH----------hhccC-ceEEEccchhhhhhHHHHHH
Q 042731 154 TDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLL----------LWKDA-DGILVNTVEELDKIGLMYFK 222 (481)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~l~~~~~~~~~ 222 (481)
....|. . ...+.+.+..... ..... +..+......++++ .
T Consensus 167 -------~~~~p~--------~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~ 217 (415)
T 3rsc_A 167 -------GTIDPL--------D---------LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----G 217 (415)
T ss_dssp -------TCCCGG--------G---------CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----G
T ss_pred -------ccCChh--------h---------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----c
Confidence 000000 0 0001111111111 11111 45555555555433 4
Q ss_pred hhcCCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEE
Q 042731 223 RKFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVV 302 (481)
Q Consensus 223 ~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 302 (481)
..++.++.++||+.... .+..+|+...+++++|||++||......+.+..+++++...+.+++|.+
T Consensus 218 ~~~~~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 283 (415)
T 3rsc_A 218 DTFDDRFVFVGPCFDDR--------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTL 283 (415)
T ss_dssp GGCCTTEEECCCCCCCC--------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEEC
T ss_pred ccCCCceEEeCCCCCCc--------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEe
Confidence 55678899999987543 1233455445567899999999987677888899999999888999988
Q ss_pred cCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccc
Q 042731 303 RPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAE 382 (481)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~D 382 (481)
+.+. ..+.+ +..+.|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|...|
T Consensus 284 g~~~-------------~~~~l----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 344 (415)
T 3rsc_A 284 GGQV-------------DPAAL----GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFD 344 (415)
T ss_dssp TTTS-------------CGGGG----CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred CCCC-------------ChHHh----cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcch
Confidence 7542 00111 001568899999999999999876 9999999999999999999999999999
Q ss_pred hhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHH
Q 042731 383 QFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQF 462 (481)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~ 462 (481)
|+.||.++++. |+|+.+.. ..++++.|.++|.++|+|+ +++++++++++.+. ..+| ..++++.+
T Consensus 345 q~~~a~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i 408 (415)
T 3rsc_A 345 VQPMARRVDQL-GLGAVLPG---EKADGDTLLAAVGAVAADP----ALLARVEAMRGHVR-------RAGG-AARAADAV 408 (415)
T ss_dssp GHHHHHHHHHH-TCEEECCG---GGCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHH-------HSCH-HHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEccc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCH-HHHHHHHH
Confidence 99999999988 99999988 7889999999999999999 89999999999986 3344 56666666
Q ss_pred HHHHH
Q 042731 463 LNAAL 467 (481)
Q Consensus 463 ~~~~~ 467 (481)
.+.+.
T Consensus 409 ~~~~~ 413 (415)
T 3rsc_A 409 EAYLA 413 (415)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 65543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.9e-36 Score=303.49 Aligned_cols=380 Identities=16% Similarity=0.178 Sum_probs=248.8
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHH-HH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPK-FL 79 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~ 79 (481)
++.||++|++.||++|++ +||+|+|++++.+.+.++. .|+++..++.+.... ..............+.. +.
T Consensus 13 ~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 84 (402)
T 3ia7_A 13 QGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFDTF--HVPEVVKQEDAETQLHLVYV 84 (402)
T ss_dssp SSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGGTS--SSSSSSCCTTHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH-----cCCEEEecccccccc--cccccccccchHHHHHHHHH
Confidence 468999999999999999 9999999999988888888 778888877421110 00000000111111111 22
Q ss_pred HHHhhhhHHHHHHHHHHhhccCCCCccEEEeC-CCCchHHHHHHHhCCceEEEechhHHHHHHHH--HhhhcCCCCCCCC
Q 042731 80 QASASLEPHFKKLISELVNEQNGQKPLCIITD-TFLGWCKETAQEYGIFHAIFIGGGGFGFACLY--SMLLNLPHRSTDS 156 (481)
Q Consensus 80 ~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~--~~~~~~p~~~~~~ 156 (481)
.......+.+.++++++ +||+||+| ....++..+|+++|||++.+.+.......... ......
T Consensus 85 ~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~------- 150 (402)
T 3ia7_A 85 RENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSN------- 150 (402)
T ss_dssp HHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccc-------
Confidence 22233344555566655 99999999 77778999999999999987643211000000 000000
Q ss_pred CccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccC-ceEEEccchhhhhhHHHHHHhhcCCCeeeeccc
Q 042731 157 DEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDA-DGILVNTVEELDKIGLMYFKRKFGRPVWPIGPV 235 (481)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl 235 (481)
....+.........+...+......... ....... +..+.....+++.. ...++.++.++||+
T Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~ 214 (402)
T 3ia7_A 151 ----GQRHPADVEAVHSVLVDLLGKYGVDTPV-------KEYWDEIEGLTIVFLPKSFQPF-----AETFDERFAFVGPT 214 (402)
T ss_dssp ----TCCCGGGSHHHHHHHHHHHHTTTCCSCH-------HHHHTCCCSCEEESSCGGGSTT-----GGGCCTTEEECCCC
T ss_pred ----cccChhhHHHHHHHHHHHHHHcCCCCCh-------hhhhcCCCCeEEEEcChHhCCc-----cccCCCCeEEeCCC
Confidence 0000000000000000000000000000 0011111 44455554444432 34567889999998
Q ss_pred ccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhh
Q 042731 236 LLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFK 315 (481)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 315 (481)
.... ....+|+...+++++|||++||......+.+..+++++...+..++++++...
T Consensus 215 ~~~~--------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------- 271 (402)
T 3ia7_A 215 LTGR--------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL--------- 271 (402)
T ss_dssp CCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS---------
T ss_pred CCCc--------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC---------
Confidence 7543 12234554455678999999999877778889999999988888888887642
Q ss_pred hcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEeccc-ccchhhhHHHHHHHh
Q 042731 316 ANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPL-AAEQFYNSKLLEEEM 394 (481)
Q Consensus 316 ~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~l 394 (481)
..+.+ +..+.|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|. ..||+.|+.++++.
T Consensus 272 ----~~~~~----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~- 340 (402)
T 3ia7_A 272 ----DPAVL----GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL- 340 (402)
T ss_dssp ----CGGGG----CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-
T ss_pred ----Chhhh----CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-
Confidence 00111 001568899999999999999886 9999999999999999999999999 99999999999987
Q ss_pred cceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHH
Q 042731 395 GVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAAL 467 (481)
Q Consensus 395 G~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 467 (481)
|+|+.+.. ..++++.|.++|.++|+|+ +++++++++++.+. ..+| ..++++.+.+.+.
T Consensus 341 g~g~~~~~---~~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 341 GLGSVLRP---DQLEPASIREAVERLAADS----AVRERVRRMQRDIL-------SSGG-PARAADEVEAYLG 398 (402)
T ss_dssp TSEEECCG---GGCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCH-HHHHHHHHHHHHH
T ss_pred CCEEEccC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh-------hCCh-HHHHHHHHHHHHh
Confidence 99999988 7889999999999999999 89999999999885 3343 5666666665554
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.8e-36 Score=305.30 Aligned_cols=367 Identities=13% Similarity=0.135 Sum_probs=234.8
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCC--CC-----CCCC---
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCT--EN-----TDSI--- 70 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~-----~~~~--- 70 (481)
++.||++|+++||++|++ +||+|+|++++.+.+.++. .|++|..++...+..++.... .. ..+.
T Consensus 29 ~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (441)
T 2yjn_A 29 ASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSER 102 (441)
T ss_dssp SCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCCCTTC
T ss_pred CCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhccccccccccccccc
Confidence 467999999999999999 9999999999988888887 778888877431000110000 00 0000
Q ss_pred -CCC-chHHH---HHHH----h-----h-hhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechh
Q 042731 71 -PYH-LFPKF---LQAS----A-----S-LEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGG 135 (481)
Q Consensus 71 -~~~-~~~~~---~~~~----~-----~-~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 135 (481)
+.. .+..+ ...+ . . ....+.++++++ +||+||+|..+.++..+|+.+|||++.+...+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 103 DPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAAVTGTPHARLLWGP 175 (441)
T ss_dssp CGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHHTCCEEEECSSC
T ss_pred CcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHHHcCCCEEEEecCC
Confidence 100 01111 1111 1 1 344555666777 99999999977889999999999999986554
Q ss_pred HHHHHH---HHHhhhcCCCCCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhcc---------Cc
Q 042731 136 GFGFAC---LYSMLLNLPHRSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKD---------AD 203 (481)
Q Consensus 136 ~~~~~~---~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 203 (481)
...... +.....+.+ .. .....+.+.+......+.. .+
T Consensus 176 ~~~~~~~~~~~~~~~~~~------------~~------------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 225 (441)
T 2yjn_A 176 DITTRARQNFLGLLPDQP------------EE------------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQ 225 (441)
T ss_dssp CHHHHHHHHHHHHGGGSC------------TT------------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCS
T ss_pred Ccchhhhhhhhhhccccc------------cc------------------cccchHHHHHHHHHHHcCCCCCCccccCCC
Confidence 322111 111111111 00 0001122222222222111 22
Q ss_pred eEEEccchhhhhhHHHHHHhhcCCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccccc---C
Q 042731 204 GILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI---A 280 (481)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~---~ 280 (481)
..+....+.++++ ..|+. ..+++... ..+.++.+|++..+++++|||++||+... .
T Consensus 226 ~~l~~~~~~~~~~------~~~~~--~~~~~~~~-------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~ 284 (441)
T 2yjn_A 226 WTIDPAPAAIRLD------TGLKT--VGMRYVDY-------------NGPSVVPEWLHDEPERRRVCLTLGISSRENSIG 284 (441)
T ss_dssp SEEECSCGGGSCC------CCCCE--EECCCCCC-------------CSSCCCCGGGSSCCSSCEEEEEC----------
T ss_pred eEEEecCccccCC------CCCCC--CceeeeCC-------------CCCcccchHhhcCCCCCEEEEECCCCcccccCh
Confidence 2333333333221 11110 12222211 11234667888666678999999999753 2
Q ss_pred HHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccC
Q 042731 281 ASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCG 360 (481)
Q Consensus 281 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG 360 (481)
.+.+..++++++..+.+++|+++... . +.+.. .+.|+.+.+|+|+.++|+.+++ ||||||
T Consensus 285 ~~~~~~~~~al~~~~~~~v~~~g~~~-------~---~~l~~--------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G 344 (441)
T 2yjn_A 285 QVSIEELLGAVGDVDAEIIATFDAQQ-------L---EGVAN--------IPDNVRTVGFVPMHALLPTCAA--TVHHGG 344 (441)
T ss_dssp CCSTTTTHHHHHTSSSEEEECCCTTT-------T---SSCSS--------CCSSEEECCSCCHHHHGGGCSE--EEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCcc-------h---hhhcc--------CCCCEEEecCCCHHHHHhhCCE--EEECCC
Confidence 35567788999988999999887541 0 11111 1568999999999999987665 999999
Q ss_pred chhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 042731 361 WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVI 440 (481)
Q Consensus 361 ~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~ 440 (481)
+||++||+++|||+|++|...||+.||.++++. |+|+.+.. ..++++.|.++|.++|+|+ +++++++++++.
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~ 416 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDDP----AHRAGAARMRDD 416 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHCH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcCH----HHHHHHHHHHHH
Confidence 999999999999999999999999999999987 99999987 7789999999999999998 899999999999
Q ss_pred HHHHhhcccCCCCchHHHHHHHHHHHH
Q 042731 441 IKNAVRNETNFKGSSVKAMDQFLNAAL 467 (481)
Q Consensus 441 ~~~~~~~~~~~~gs~~~~~~~~~~~~~ 467 (481)
++ ..+| ..++++.+.+.+.
T Consensus 417 ~~-------~~~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 417 ML-------AEPS-PAEVVGICEELAA 435 (441)
T ss_dssp HH-------TSCC-HHHHHHHHHHHHH
T ss_pred HH-------cCCC-HHHHHHHHHHHHH
Confidence 86 4455 5566555555443
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.4e-35 Score=292.04 Aligned_cols=351 Identities=13% Similarity=0.092 Sum_probs=239.0
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCC---CCCCCCCCCC-CchH
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPP---CTENTDSIPY-HLFP 76 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~-~~~~ 76 (481)
++.||++|+++||++|++ +||+|+|++++.+.+.++. .++++..++.......+.. ....... .. ....
T Consensus 9 ~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (384)
T 2p6p_A 9 GSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIP-SDPVAQA 81 (384)
T ss_dssp SSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCC-CSHHHHH
T ss_pred CccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccC-cchHHHH
Confidence 467999999999999999 9999999999888777777 6777887763210000000 0000000 00 0011
Q ss_pred HH----H-HHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCC
Q 042731 77 KF----L-QASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPH 151 (481)
Q Consensus 77 ~~----~-~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~ 151 (481)
.+ + .........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------------- 140 (384)
T 2p6p_A 82 RFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------------- 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------------
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------------
Confidence 11 1 11123345566777777 9999999988788889999999999987642100
Q ss_pred CCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhc-----cCceEEEccchhhhhhHHHHHHhhcC
Q 042731 152 RSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWK-----DADGILVNTVEELDKIGLMYFKRKFG 226 (481)
Q Consensus 152 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~ 226 (481)
..+ + . ..+...+.+...... .++.++.++...++++. .++
T Consensus 141 ---------~~~------~-----~---------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~~~ 185 (384)
T 2p6p_A 141 ---------ADG------I-----H---------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN------AAP 185 (384)
T ss_dssp ---------CTT------T-----H---------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------SCC
T ss_pred ---------cch------h-----h---------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------CCC
Confidence 000 0 0 001111111111111 14567788877776431 122
Q ss_pred -CCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccccc-----CHHHHHHHHHHHHhcCCceEE
Q 042731 227 -RPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI-----AASQMMQLAMALEASGKNFIW 300 (481)
Q Consensus 227 -~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~ 300 (481)
.++.+++ .. .+.++.+|++..+++++|||++||+... ..+.+..++++++..+.+++|
T Consensus 186 ~~~~~~~~---~~-------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 249 (384)
T 2p6p_A 186 ARMMRHVA---TS-------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIV 249 (384)
T ss_dssp CEECCCCC---CC-------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEE
T ss_pred CCceEecC---CC-------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEE
Confidence 1222221 11 1124567887655578999999999754 346788899999998999999
Q ss_pred EEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccc
Q 042731 301 VVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLA 380 (481)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~ 380 (481)
+++.. ..+.+.. . +.++.+ +|+|+.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 250 ~~g~~--------------~~~~l~~-~---~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 250 AAPDT--------------VAEALRA-E---VPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp ECCHH--------------HHHHHHH-H---CTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred EeCCC--------------CHHhhCC-C---CCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 87632 0111111 1 568889 99999999988665 99999999999999999999999999
Q ss_pred cchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHH
Q 042731 381 AEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMD 460 (481)
Q Consensus 381 ~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~ 460 (481)
.||+.|+.++++. |+|+.+.. ..++++.|.++|.++|+|+ +++++++++++.++ ..+| ..++++
T Consensus 309 ~dq~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~ 372 (384)
T 2p6p_A 309 SVLEAPARRVADY-GAAIALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREIS-------GMPL-PATVVT 372 (384)
T ss_dssp HHHHHHHHHHHHH-TSEEECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHH
T ss_pred ccchHHHHHHHHC-CCeEecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHH
Confidence 9999999999977 99999987 6789999999999999998 89999999999997 4465 556655
Q ss_pred HHHHHHH
Q 042731 461 QFLNAAL 467 (481)
Q Consensus 461 ~~~~~~~ 467 (481)
.+...+-
T Consensus 373 ~i~~~~~ 379 (384)
T 2p6p_A 373 ALEQLAH 379 (384)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 5544443
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.4e-34 Score=289.95 Aligned_cols=376 Identities=16% Similarity=0.178 Sum_probs=242.3
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHH--
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKF-- 78 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-- 78 (481)
++.||++|+++||++|++ +||+|+++++..+.+.+.+ .+++++.++.. ++........... .....
T Consensus 16 ~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~ 83 (430)
T 2iyf_A 16 AAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA-----TGPRPVLYHST-----LPGPDADPEAWGS-TLLDNVE 83 (430)
T ss_dssp SCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TSCEEEECCCC-----SCCTTSCGGGGCS-SHHHHHH
T ss_pred CCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc-----Cccccccccccch-hhHHHHH
Confidence 467999999999999999 9999999999988777777 77888876631 1111110000000 11111
Q ss_pred --HHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhh-cCCCCCCC
Q 042731 79 --LQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLL-NLPHRSTD 155 (481)
Q Consensus 79 --~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~-~~p~~~~~ 155 (481)
..........+.+++++. +||+||+|....++..+|+++|||++.+.+.+.........+.. ..+
T Consensus 84 ~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~----- 151 (430)
T 2iyf_A 84 PFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR----- 151 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh-----
Confidence 122233344555666655 89999999877789999999999999987543200000000000 000
Q ss_pred CCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCC-eeeecc
Q 042731 156 SDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRP-VWPIGP 234 (481)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~vGp 234 (481)
.....+++. .....+...+......... ......++.+++++...++++. ..++++ ++++||
T Consensus 152 -~~~~~~~~~----~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~v~~vG~ 214 (430)
T 2iyf_A 152 -EPRQTERGR----AYYARFEAWLKENGITEHP-------DTFASHPPRSLVLIPKALQPHA-----DRVDEDVYTFVGA 214 (430)
T ss_dssp -HHHHSHHHH----HHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEECSCGGGSTTG-----GGSCTTTEEECCC
T ss_pred -hhccchHHH----HHHHHHHHHHHHhCCCCCH-------HHHhcCCCcEEEeCcHHhCCCc-----ccCCCccEEEeCC
Confidence 000000000 0000000000000000000 0111245678888888777541 346677 999998
Q ss_pred cccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhc-CCceEEEEcCCCCCCCcch
Q 042731 235 VLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSE 313 (481)
Q Consensus 235 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~ 313 (481)
.+... ....+|.+..+++++|||++||+.....+.+..++++++.. +.+++|+++...
T Consensus 215 ~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~------- 273 (430)
T 2iyf_A 215 CQGDR--------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV------- 273 (430)
T ss_dssp CC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC----------
T ss_pred cCCCC--------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC-------
Confidence 65432 01124555445678999999999854567888899999885 778888887542
Q ss_pred hhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHH
Q 042731 314 FKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEE 393 (481)
Q Consensus 314 ~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 393 (481)
..+.+ +..+.++.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||+.|+.++++.
T Consensus 274 ------~~~~l----~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~ 341 (430)
T 2iyf_A 274 ------TPAEL----GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL 341 (430)
T ss_dssp ------CGGGG----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred ------ChHHh----ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc
Confidence 00111 001568899999999999999886 999999999999999999999999999999999999977
Q ss_pred hcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHH
Q 042731 394 MGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAA 466 (481)
Q Consensus 394 lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 466 (481)
|+|+.+.. ..++++.|.++|.++++|+ .+++++.++++.+.+. ++ ..+.++.+++.+
T Consensus 342 -g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~-------~~-~~~~~~~i~~~~ 398 (430)
T 2iyf_A 342 -GVARKLAT---EEATADLLRETALALVDDP----EVARRLRRIQAEMAQE-------GG-TRRAADLIEAEL 398 (430)
T ss_dssp -TSEEECCC---C-CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH-------CH-HHHHHHHHHTTS
T ss_pred -CCEEEcCC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc-------Cc-HHHHHHHHHHHh
Confidence 99999987 6789999999999999998 7888888888887633 33 455555554443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.4e-33 Score=276.87 Aligned_cols=338 Identities=14% Similarity=0.136 Sum_probs=211.7
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCC--CCCCCCCCCc---h
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCT--ENTDSIPYHL---F 75 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~---~ 75 (481)
++.||++|+++||++|++ +||+|++++++.+.+.+.. .|+++..++.+.....+.... .......... .
T Consensus 24 ~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (398)
T 4fzr_A 24 CSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPLL 97 (398)
T ss_dssp SSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHHHHH
T ss_pred CCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCcccccccchhhHH
Confidence 467999999999999999 9999999999988888888 677777776310000000000 0000011110 0
Q ss_pred H----HHHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCC
Q 042731 76 P----KFLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPH 151 (481)
Q Consensus 76 ~----~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~ 151 (481)
. .+......+...+.++++++ +||+||+|...+++..+|+.+|||++.+...........
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~--------- 161 (398)
T 4fzr_A 98 EHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK--------- 161 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh---------
Confidence 1 11122234455677788888 999999998778899999999999998765321100000
Q ss_pred CCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhh-----ccCceEEEccchhhhhhHHHHHHhhcC
Q 042731 152 RSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLW-----KDADGILVNTVEELDKIGLMYFKRKFG 226 (481)
Q Consensus 152 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~ 226 (481)
....+.+......+ ...+..+......+..+. .
T Consensus 162 ----------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--- 199 (398)
T 4fzr_A 162 ----------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----K--- 199 (398)
T ss_dssp ----------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------------
T ss_pred ----------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----C---
Confidence 00001111111111 111223333333232210 0
Q ss_pred CCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccccc--------CHHHHHHHHHHHHhcCCce
Q 042731 227 RPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI--------AASQMMQLAMALEASGKNF 298 (481)
Q Consensus 227 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~~~~al~~~~~~~ 298 (481)
.....+...... ....++.+|+...+.+++|||++||+... ..+.+..+++++...+.++
T Consensus 200 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 267 (398)
T 4fzr_A 200 PGTTKMRYVPYN------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEV 267 (398)
T ss_dssp CCCEECCCCCCC------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEE
T ss_pred CCCCCeeeeCCC------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEE
Confidence 111111111100 01234556766555678999999999643 2345788999999889999
Q ss_pred EEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecc
Q 042731 299 IWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWP 378 (481)
Q Consensus 299 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P 378 (481)
+|+.+... .+.+.. .+.|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|
T Consensus 268 v~~~~~~~--------------~~~l~~----~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 268 VVAVSDKL--------------AQTLQP----LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp EECCCC--------------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred EEEeCCcc--------------hhhhcc----CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 88876541 011110 1568999999999999999776 999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 042731 379 LAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIK 442 (481)
Q Consensus 379 ~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~ 442 (481)
...||+.|+.++++. |+|+.+.. ..++++.|.++|.++|+|+ ++++++++.++.+.
T Consensus 328 ~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 328 VIAEVWDSARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp CSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 999999999999988 99999987 7789999999999999999 99999999999885
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.8e-32 Score=271.37 Aligned_cols=350 Identities=11% Similarity=0.129 Sum_probs=229.0
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCC-------C----CCC-CCC
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLP-------P----CTE-NTD 68 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-------~----~~~-~~~ 68 (481)
++.||++|+++||++|++ +||+|+++++ .+.+.++. .|+++..++.+.....+. . ... ...
T Consensus 29 ~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (398)
T 3oti_A 29 PGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPA 101 (398)
T ss_dssp SSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSCC
T ss_pred CCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCccccccccCChh
Confidence 467999999999999999 9999999999 88888888 788888877320000000 0 000 000
Q ss_pred CCCCCchHHHHHHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhc
Q 042731 69 SIPYHLFPKFLQASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLN 148 (481)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 148 (481)
.........+......+...+.++++++ +||+||+|...+++..+|+.+|||++.+......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~----------- 163 (398)
T 3oti_A 102 IDLEEWGVQIAAVNRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR----------- 163 (398)
T ss_dssp CSGGGGHHHHHHHHGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC-----------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC-----------
Confidence 0111111223333455677888899999 9999999988788899999999999976542100
Q ss_pred CCCCCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCC
Q 042731 149 LPHRSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRP 228 (481)
Q Consensus 149 ~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 228 (481)
... . ..... ..+.....+........+..+......+..+. ...
T Consensus 164 ------------~~~------~-----~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 207 (398)
T 3oti_A 164 ------------TRG------M-----HRSIA-----SFLTDLMDKHQVSLPEPVATIESFPPSLLLEA--------EPE 207 (398)
T ss_dssp ------------CTT------H-----HHHHH-----TTCHHHHHHTTCCCCCCSEEECSSCGGGGTTS--------CCC
T ss_pred ------------ccc------h-----hhHHH-----HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC--------CCC
Confidence 000 0 00000 00001111100001111223322222222110 000
Q ss_pred eeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccccc--CHHHHHHHHHHHHhcCCceEEEEcCCC
Q 042731 229 VWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI--AASQMMQLAMALEASGKNFIWVVRPPI 306 (481)
Q Consensus 229 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~~~~~~ 306 (481)
...+..... .......+|+...+.+++|||++||+... ..+.+..++++++..+.+++|+.+...
T Consensus 208 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~ 274 (398)
T 3oti_A 208 GWFMRWVPY-------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD 274 (398)
T ss_dssp SBCCCCCCC-------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC
T ss_pred CCCccccCC-------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence 000000000 11233455766556678999999999643 456688899999999999999987651
Q ss_pred CCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhh
Q 042731 307 GFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYN 386 (481)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n 386 (481)
.+.+. ..+.|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|
T Consensus 275 --------------~~~l~----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~ 334 (398)
T 3oti_A 275 --------------ISPLG----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334 (398)
T ss_dssp --------------CGGGC----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSC
T ss_pred --------------hhhhc----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHH
Confidence 01110 01568999999999999999775 99999999999999999999999999999999
Q ss_pred H--HHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHH
Q 042731 387 S--KLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLN 464 (481)
Q Consensus 387 a--~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~ 464 (481)
+ .++++. |+|+.++. ...+++.|. ++++|+ +++++++++++.+. ...+ ..+.++.+.+
T Consensus 335 a~~~~~~~~-g~g~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~l~~ 394 (398)
T 3oti_A 335 TAREAVSRR-GIGLVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMV-------ALPT-PAETVRRIVE 394 (398)
T ss_dssp TTHHHHHHH-TSEEECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHHHHHH
Confidence 9 999977 99999988 777887777 888898 89999999999986 4455 4455544443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.98 E-value=4.8e-31 Score=263.39 Aligned_cols=355 Identities=14% Similarity=0.124 Sum_probs=226.6
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEe-cCCCCCCCC-CCCCCCC----CCCCCCc
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEI-PFNSVEHDL-PPCTENT----DSIPYHL 74 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~l-~~~~~~~----~~~~~~~ 74 (481)
++.||++|++.|+++|++ +||+|++++++.+.+.+.. .|+++..+ +.+...... ....... .......
T Consensus 10 ~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (391)
T 3tsa_A 10 PYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRDTEA 83 (391)
T ss_dssp SCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGGGGCTTSHH
T ss_pred CCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccccccccchh
Confidence 467999999999999999 9999999999888888888 67778777 321000000 0000000 0000011
Q ss_pred hHH-HHHHHhhh-------hHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhh
Q 042731 75 FPK-FLQASASL-------EPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSML 146 (481)
Q Consensus 75 ~~~-~~~~~~~~-------~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 146 (481)
... +......+ ...+.++++++ +||+||+|...+++..+|+.+|||++.+......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~--------- 147 (391)
T 3tsa_A 84 GRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP--------- 147 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC---------
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc---------
Confidence 111 11112233 56677888888 9999999987778889999999999987542200
Q ss_pred hcCCCCCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhcc-----CceEEEccchhhhhhHHHHH
Q 042731 147 LNLPHRSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKD-----ADGILVNTVEELDKIGLMYF 221 (481)
Q Consensus 147 ~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~ 221 (481)
.. . .. ......++......+.. .+.++..+..+++..
T Consensus 148 ------------------~~---~-------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (391)
T 3tsa_A 148 ------------------TA---G-------PF-----SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS----- 189 (391)
T ss_dssp ------------------TT---T-------HH-----HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----
T ss_pred ------------------cc---c-------cc-----cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----
Confidence 00 0 00 00111122222121111 133333333333221
Q ss_pred HhhcCCCeeeecccccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccc--cC-HHHHHHHHHHHHhc-CCc
Q 042731 222 KRKFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT--IA-ASQMMQLAMALEAS-GKN 297 (481)
Q Consensus 222 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~ 297 (481)
.......+.++ |. ........|+...+++++|+|++||... .. .+.+..++++ +.. +.+
T Consensus 190 ~~~~~~~~~~~-p~---------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~ 252 (391)
T 3tsa_A 190 DAPQGAPVQYV-PY---------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE 252 (391)
T ss_dssp TSCCCEECCCC-CC---------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE
T ss_pred CCCccCCeeee-cC---------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE
Confidence 00000111122 10 0122344577665668899999999853 33 6778888888 776 778
Q ss_pred eEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEec
Q 042731 298 FIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGW 377 (481)
Q Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~ 377 (481)
++|+.++.. . +.+.. .+.|+.+.+|+|+.++|+.+++ ||||||.||++||+++|+|+|++
T Consensus 253 ~v~~~~~~~-------~---~~l~~--------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 253 AVIAVPPEH-------R---ALLTD--------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp EEEECCGGG-------G---GGCTT--------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred EEEEECCcc-------h---hhccc--------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEec
Confidence 888876431 0 11111 1568899999999999977665 99999999999999999999999
Q ss_pred ccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHH
Q 042731 378 PLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVK 457 (481)
Q Consensus 378 P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~ 457 (481)
|...||+.|+.++++. |+|+.+... ....+++.|.++|.++|+|+ +++++++++++.+. ..++ ..+
T Consensus 313 p~~~~q~~~a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~ 378 (391)
T 3tsa_A 313 PQYFDQFDYARNLAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT-------AMPH-PAA 378 (391)
T ss_dssp CCSTTHHHHHHHHHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH-------TSCC-HHH
T ss_pred CCcccHHHHHHHHHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------cCCC-HHH
Confidence 9999999999999988 999988630 01368999999999999999 89999999998886 4455 555
Q ss_pred HHHHHHHHH
Q 042731 458 AMDQFLNAA 466 (481)
Q Consensus 458 ~~~~~~~~~ 466 (481)
+++.+.+.+
T Consensus 379 ~~~~i~~~~ 387 (391)
T 3tsa_A 379 LVRTLENTA 387 (391)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 555554443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=3.8e-29 Score=251.37 Aligned_cols=356 Identities=15% Similarity=0.178 Sum_probs=234.0
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCC--------C-CCCCCC-CC
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLP--------P-CTENTD-SI 70 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~--------~-~~~~~~-~~ 70 (481)
++.||++|+++||++|++ +||+|++++++.+.+.+.. .|+++..++... ..+++ . ...... ..
T Consensus 29 ~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 101 (412)
T 3otg_A 29 GTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK-----LGFEPVATGMPV-FDGFLAALRIRFDTDSPEGLTPEQ 101 (412)
T ss_dssp SSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCCH-HHHHHHHHHHHHSCSCCTTCCHHH
T ss_pred CCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh-----cCCceeecCccc-ccchhhhhhhhhcccCCccCChhH
Confidence 357999999999999999 9999999999888777777 778888777300 00000 0 000000 00
Q ss_pred CCCchHHHHH-H-HhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHHHHHHHHHhhhc
Q 042731 71 PYHLFPKFLQ-A-SASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLN 148 (481)
Q Consensus 71 ~~~~~~~~~~-~-~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 148 (481)
.......++. . .......+.++++++ +||+||+|....++..+|+.+|||++.+.......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---------- 164 (412)
T 3otg_A 102 LSELPQIVFGRVIPQRVFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP---------- 164 (412)
T ss_dssp HTTSHHHHHHTHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----------
T ss_pred hhHHHHHHHhccchHHHHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc----------
Confidence 0011111111 1 123346678888888 99999999877778889999999999865432100
Q ss_pred CCCCCCCCCccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHh----------hccCceEEEccchhhhhhHH
Q 042731 149 LPHRSTDSDEFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLL----------WKDADGILVNTVEELDKIGL 218 (481)
Q Consensus 149 ~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~ 218 (481)
++. ...+.+.+.+.... ...++.++..+...++..
T Consensus 165 -------------~~~--------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~-- 209 (412)
T 3otg_A 165 -------------DDL--------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEP-- 209 (412)
T ss_dssp -------------SHH--------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCH--
T ss_pred -------------hhh--------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCC--
Confidence 000 00011111111111 122344454444444322
Q ss_pred HHHHhhcCCCeeeecccccCccccccccccCCCChhhhhhh-hcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCc
Q 042731 219 MYFKRKFGRPVWPIGPVLLSTESRAGARKEYGISTELCKKW-LDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKN 297 (481)
Q Consensus 219 ~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 297 (481)
...+......+-+.... ......+| ....+++++|++++||......+.+..+++++...+..
T Consensus 210 ---~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~ 273 (412)
T 3otg_A 210 ---EFRARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDAD 273 (412)
T ss_dssp ---HHHTCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSE
T ss_pred ---cccCCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCE
Confidence 11111111111111111 11223445 23334577999999999755678888999999998889
Q ss_pred eEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEec
Q 042731 298 FIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGW 377 (481)
Q Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~ 377 (481)
++|+.+... . . +.+.. .+.++.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++
T Consensus 274 ~~~~~g~~~---~---~---~~l~~--------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~ 334 (412)
T 3otg_A 274 VLVASGPSL---D---V---SGLGE--------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSF 334 (412)
T ss_dssp EEEECCSSC---C---C---TTCCC--------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEEC
T ss_pred EEEEECCCC---C---h---hhhcc--------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEec
Confidence 999887652 0 0 11111 1568889999999999999886 99999999999999999999999
Q ss_pred ccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHH
Q 042731 378 PLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVK 457 (481)
Q Consensus 378 P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~ 457 (481)
|...||..|+..+++. |+|..+.. ...+++.|.++|.++++|+ .+++++.+.++.+. ...+ ..+
T Consensus 335 p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~ 398 (412)
T 3otg_A 335 PWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA-------AMPG-PDE 398 (412)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------HSCC-HHH
T ss_pred CCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh-------cCCC-HHH
Confidence 9999999999999988 99999998 7789999999999999999 88988888888875 3343 555
Q ss_pred HHHHHHHHH
Q 042731 458 AMDQFLNAA 466 (481)
Q Consensus 458 ~~~~~~~~~ 466 (481)
.++.+.+.+
T Consensus 399 ~~~~~~~l~ 407 (412)
T 3otg_A 399 VVRLLPGFA 407 (412)
T ss_dssp HHTTHHHHH
T ss_pred HHHHHHHHh
Confidence 555555544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=8.5e-28 Score=237.17 Aligned_cols=333 Identities=16% Similarity=0.120 Sum_probs=201.7
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcch--hhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNL--KKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQA 81 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 81 (481)
||++|.++||++|++ +||+|+|+++.... +.+.+ .++++..++.. ++.... .... ......+...
T Consensus 14 GHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~----~~~~~~-~~~~--~~~~~~~~~~ 80 (365)
T 3s2u_A 14 GHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS----GLRGKG-LKSL--VKAPLELLKS 80 (365)
T ss_dssp HHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG-----GTCCEEECC---------------------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh-----cCCcEEEEECC----CcCCCC-HHHH--HHHHHHHHHH
Confidence 899999999999999 99999999987542 33455 66778777742 222100 0000 0111222222
Q ss_pred HhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCCCcc
Q 042731 82 SASLEPHFKKLISELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSDEF 159 (481)
Q Consensus 82 ~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (481)
+ .....+++++ +||+||++.... ++..+|+.+|||+++.-. .
T Consensus 81 ~----~~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-------------------------n 124 (365)
T 3s2u_A 81 L----FQALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-------------------------N 124 (365)
T ss_dssp H----HHHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-------------------------S
T ss_pred H----HHHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-------------------------c
Confidence 2 2346788999 999999996544 556788899999996421 0
Q ss_pred ccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCCeeeecccccCc
Q 042731 160 LLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLST 239 (481)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~~ 239 (481)
..|++.+ +. ..+.++.+. ..+++..+ ...+..++|......
T Consensus 125 ~~~G~~n---------------------------r~--l~~~a~~v~-~~~~~~~~---------~~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 125 AVAGTAN---------------------------RS--LAPIARRVC-EAFPDTFP---------ASDKRLTTGNPVRGE 165 (365)
T ss_dssp SSCCHHH---------------------------HH--HGGGCSEEE-ESSTTSSC---------C---CEECCCCCCGG
T ss_pred hhhhhHH---------------------------Hh--hccccceee-eccccccc---------CcCcEEEECCCCchh
Confidence 1222211 00 011122222 23322211 124567778655443
Q ss_pred cccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhc----CCceEEEEcCCCCCCCcchhh
Q 042731 240 ESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEAS----GKNFIWVVRPPIGFDINSEFK 315 (481)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~ 315 (481)
.. ..... +....+.++.|+|..||...... ...+.+++... +..++++++...
T Consensus 166 ~~----------~~~~~--~~~~~~~~~~ilv~gGs~g~~~~--~~~~~~al~~l~~~~~~~vi~~~G~~~--------- 222 (365)
T 3s2u_A 166 LF----------LDAHA--RAPLTGRRVNLLVLGGSLGAEPL--NKLLPEALAQVPLEIRPAIRHQAGRQH--------- 222 (365)
T ss_dssp GC----------CCTTS--SCCCTTSCCEEEECCTTTTCSHH--HHHHHHHHHTSCTTTCCEEEEECCTTT---------
T ss_pred hc----------cchhh--hcccCCCCcEEEEECCcCCcccc--chhhHHHHHhcccccceEEEEecCccc---------
Confidence 11 01111 11122346689999999875432 23344555543 345666666541
Q ss_pred hcCCCchhHHHHhccCCCcEEEecccCHH-HhhcccCccceeeccCchhHHHHHHhCCcEEecccc----cchhhhHHHH
Q 042731 316 ANKWLPRGFEERIKCSGQGLVVHKWAPQV-EILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYNSKLL 390 (481)
Q Consensus 316 ~~~~l~~~~~~~~~~~~~~~~v~~~ip~~-~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~----~DQ~~na~~v 390 (481)
.+...+..+..+.++.+.+|++++ ++|+.+++ +|||+|.+|++|++++|+|+|++|+. .+|..||..+
T Consensus 223 -----~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 223 -----AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp -----HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred -----cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 123333333335678888999985 69988886 99999999999999999999999974 5899999999
Q ss_pred HHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhhh
Q 042731 391 EEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIMR 470 (481)
Q Consensus 391 ~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 470 (481)
++. |+|+.+.. ..++++.|.++|.++++|++..+.|+++++++ ....+..+.++.+++.+++..
T Consensus 296 ~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~------------~~~~aa~~ia~~i~~larG~e 359 (365)
T 3s2u_A 296 VRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARSL------------AKPEATRTVVDACLEVARGLE 359 (365)
T ss_dssp HTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT------------CCTTHHHHHHHHHHHHC----
T ss_pred HHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc------------CCccHHHHHHHHHHHHHccch
Confidence 988 99999988 78999999999999999994444444444433 223334555555555554444
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=202.81 Aligned_cols=164 Identities=24% Similarity=0.409 Sum_probs=140.2
Q ss_pred CCChhhhhhhhcCCCCCeEEEEEcccccc-cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHh
Q 042731 250 GISTELCKKWLDTKPYTSVLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERI 328 (481)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 328 (481)
..++.++.+|++..+++++|||++||+.. ...+.+..++++++..+.+++|+++... ++.+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------~~~~---- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------PDTL---- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------CTTC----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------cccC----
Confidence 34678899999877667899999999963 4677888899999888899999987541 1111
Q ss_pred ccCCCcEEEecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCccc
Q 042731 329 KCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEV 408 (481)
Q Consensus 329 ~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~ 408 (481)
+.|+.+.+|+|+.++|.|+++++||||||+||++||+++|+|+|++|...||..||.++++. |+|+.+.. ..+
T Consensus 67 ---~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~ 139 (170)
T 2o6l_A 67 ---GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTM 139 (170)
T ss_dssp ---CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTC
T ss_pred ---CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccC
Confidence 55888999999999997777778999999999999999999999999999999999999977 99999987 778
Q ss_pred CHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 042731 409 LKEDLSAKIELVMNETEKGTDLRNKANEVKVIIK 442 (481)
Q Consensus 409 ~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~ 442 (481)
+.+.|.++|.++++|+ +|+++++++++.++
T Consensus 140 ~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 140 SSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp CHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 9999999999999998 89999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=5.6e-18 Score=166.78 Aligned_cols=332 Identities=14% Similarity=0.119 Sum_probs=198.3
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcch--hhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHH--
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNL--KKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFL-- 79 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-- 79 (481)
||..+++.||++|.+ +||+|++++..... +.+.. .++++..++.. .+.. .. ....+.
T Consensus 18 G~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~------~~---~~~~~~~~ 78 (364)
T 1f0k_A 18 GHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS----GLRG------KG---IKALIAAP 78 (364)
T ss_dssp HHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC----CCTT------CC---HHHHHTCH
T ss_pred cchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc-----cCCceEEecCC----ccCc------Cc---cHHHHHHH
Confidence 899999999999999 99999999976532 23444 56777766642 1111 00 001110
Q ss_pred HHHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCC--chHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCCC
Q 042731 80 QASASLEPHFKKLISELVNEQNGQKPLCIITDTFL--GWCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSD 157 (481)
Q Consensus 80 ~~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (481)
.........+.+++++. +||+|+++... .++..+++.+|+|++......
T Consensus 79 ~~~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------------- 129 (364)
T 1f0k_A 79 LRIFNAWRQARAIMKAY-------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHHHH-------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------------
T ss_pred HHHHHHHHHHHHHHHhc-------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------------
Confidence 01112234556778888 99999998643 245677888999998643310
Q ss_pred ccccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcCCCeeeeccccc
Q 042731 158 EFLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLL 237 (481)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~ 237 (481)
.++ ... + .....++.+++.+... ++ ++..+|....
T Consensus 130 ---~~~-----------------------~~~----~--~~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~ 164 (364)
T 1f0k_A 130 ---IAG-----------------------LTN----K--WLAKIATKVMQAFPGA------------FP-NAEVVGNPVR 164 (364)
T ss_dssp ---SCC-----------------------HHH----H--HHTTTCSEEEESSTTS------------SS-SCEECCCCCC
T ss_pred ---CCc-----------------------HHH----H--HHHHhCCEEEecChhh------------cC-CceEeCCccc
Confidence 000 000 0 0122344455433211 22 4556664332
Q ss_pred CccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhc--CCceEEEEcCCCCCCCcchhh
Q 042731 238 STESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEAS--GKNFIWVVRPPIGFDINSEFK 315 (481)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~ 315 (481)
.... .... ..+.+...+.+++|+++.|+... ......++++++.. +..+++++|...
T Consensus 165 ~~~~---------~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------- 223 (364)
T 1f0k_A 165 TDVL---------ALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------- 223 (364)
T ss_dssp HHHH---------TSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC---------
T ss_pred hhhc---------ccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch---------
Confidence 2100 0000 11122222335678888888753 23334444555543 455566666541
Q ss_pred hcCCCchhHHHHhccCC-CcEEEecccCH-HHhhcccCccceeeccCchhHHHHHHhCCcEEecccc---cchhhhHHHH
Q 042731 316 ANKWLPRGFEERIKCSG-QGLVVHKWAPQ-VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLA---AEQFYNSKLL 390 (481)
Q Consensus 316 ~~~~l~~~~~~~~~~~~-~~~~v~~~ip~-~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~---~DQ~~na~~v 390 (481)
.+.+.+..+..+ .++.+.+|+++ ..++..+++ +|+++|.++++||+++|+|+|+.|.. .||..|+..+
T Consensus 224 -----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~ 296 (364)
T 1f0k_A 224 -----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 296 (364)
T ss_dssp -----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred -----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH
Confidence 123333332112 47888899954 679988886 99999989999999999999999987 7999999999
Q ss_pred HHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhhh
Q 042731 391 EEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIMR 470 (481)
Q Consensus 391 ~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 470 (481)
.+. |.|..++. ...+++.|+++|.++ |+ ..+++..+-+ ++. .+..+..+.++++++.+++..
T Consensus 297 ~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~----~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 297 EKA-GAAKIIEQ---PQLSVDAVANTLAGW--SR----ETLLTMAERA---RAA-----SIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HHT-TSEEECCG---GGCCHHHHHHHHHTC--CH----HHHHHHHHHH---HHT-----CCTTHHHHHHHHHHHHHTTC-
T ss_pred HhC-CcEEEecc---ccCCHHHHHHHHHhc--CH----HHHHHHHHHH---HHh-----hccCHHHHHHHHHHHHHHHHH
Confidence 988 99999887 667799999999988 66 3333332222 222 234545666677777766666
Q ss_pred hhcc
Q 042731 471 QMEK 474 (481)
Q Consensus 471 ~~~~ 474 (481)
+.++
T Consensus 359 ~~~~ 362 (364)
T 1f0k_A 359 HHHH 362 (364)
T ss_dssp ----
T ss_pred hhcc
Confidence 5443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.65 E-value=1.7e-14 Score=135.23 Aligned_cols=118 Identities=12% Similarity=0.076 Sum_probs=90.7
Q ss_pred CCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHH
Q 042731 265 YTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQV 344 (481)
Q Consensus 265 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~ 344 (481)
+.+.|+|++|..... .....+++++.... ++.++++... ...+.+....+. ..++.+..|++++
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~------------~~~~~l~~~~~~-~~~v~v~~~~~~m 219 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN------------PNLKKLQKFAKL-HNNIRLFIDHENI 219 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC------------TTHHHHHHHHHT-CSSEEEEESCSCH
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc------------hHHHHHHHHHhh-CCCEEEEeCHHHH
Confidence 356899999976432 34556777776544 5777777662 123344433321 3589999999987
Q ss_pred -HhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeec
Q 042731 345 -EILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIAR 402 (481)
Q Consensus 345 -~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~ 402 (481)
+++..+++ +||+|| +|++|+++.|+|+|++|...+|..||..+++. |++..+..
T Consensus 220 ~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 220 AKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 68988886 999999 89999999999999999999999999999988 99998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.58 E-value=4.5e-15 Score=133.58 Aligned_cols=134 Identities=14% Similarity=0.104 Sum_probs=95.5
Q ss_pred CCCeEEEEEcccccccCHHHHHHH-----HHHHHhcC-CceEEEEcCCCCCCCcchhhhcCCCchhHHHHh---------
Q 042731 264 PYTSVLYVSFGSQNTIAASQMMQL-----AMALEASG-KNFIWVVRPPIGFDINSEFKANKWLPRGFEERI--------- 328 (481)
Q Consensus 264 ~~~~~V~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------- 328 (481)
+.+++|||+.||... -.+.+..+ ++++...+ .++++.+|.... .....+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----------~~~~~~~~~~~~~~~~~l~ 93 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----------SEFEHLVQERGGQRESQKI 93 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----------CCCCSHHHHHTCEECSCCC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----------hhHHHHHHhhhcccccccc
Confidence 346789999999842 23434433 48888877 789999886630 0111111111
Q ss_pred ----------------ccCCCcEEEecccCHH-Hhhc-ccCccceeeccCchhHHHHHHhCCcEEecccc----cchhhh
Q 042731 329 ----------------KCSGQGLVVHKWAPQV-EILS-HRSVSAFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYN 386 (481)
Q Consensus 329 ----------------~~~~~~~~v~~~ip~~-~ll~-~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~----~DQ~~n 386 (481)
....-++.+.+|++++ ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..|
T Consensus 94 p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~n 171 (224)
T 2jzc_A 94 PIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQI 171 (224)
T ss_dssp SSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHH
T ss_pred ccccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHH
Confidence 0002256677898886 7898 8886 99999999999999999999999984 479999
Q ss_pred HHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 387 SKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 387 a~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
|.++++. |+|+.+ +++.|.++|.++
T Consensus 172 A~~l~~~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 172 ADKFVEL-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHHHHHH-SCCCEE--------CSCTTTHHHHHH
T ss_pred HHHHHHC-CCEEEc--------CHHHHHHHHHHH
Confidence 9999988 998755 345666777776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.19 E-value=3.9e-08 Score=98.64 Aligned_cols=346 Identities=12% Similarity=0.074 Sum_probs=175.1
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcchhh--hhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNLKK--LKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQA 81 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 81 (481)
|+-.....|++.|.+ +||+|++++....... .... . .++++..++.. +.. ......+....
T Consensus 43 G~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~-~--~~v~v~~~~~~------~~~-----~~~~~~~~~~~-- 105 (438)
T 3c48_A 43 GMNVYILSTATELAK-QGIEVDIYTRATRPSQGEIVRV-A--ENLRVINIAAG------PYE-----GLSKEELPTQL-- 105 (438)
T ss_dssp CHHHHHHHHHHHHHH-TTCEEEEEEECCCGGGCSEEEE-E--TTEEEEEECCS------CSS-----SCCGGGGGGGH--
T ss_pred CHHHHHHHHHHHHHh-cCCEEEEEecCCCCCCcccccc-c--CCeEEEEecCC------Ccc-----ccchhHHHHHH--
Confidence 667788999999999 9999999996543211 1111 1 56777776632 100 00000011111
Q ss_pred HhhhhHHHHHH-HHHHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEechhHHHHHHHHHhhhcCCCCCCCCCc
Q 042731 82 SASLEPHFKKL-ISELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSDE 158 (481)
Q Consensus 82 ~~~~~~~~~~l-l~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (481)
......+..+ ++... +||+|++..... .+..+++.+|+|+|..........
T Consensus 106 -~~~~~~~~~~~~~~~~------~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------------- 159 (438)
T 3c48_A 106 -AAFTGGMLSFTRREKV------TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------------------- 159 (438)
T ss_dssp -HHHHHHHHHHHHHHTC------CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-------------------
T ss_pred -HHHHHHHHHHHHhccC------CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-------------------
Confidence 1111122222 44330 499999875322 344567778999987665432110
Q ss_pred cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhcC---CCeeeeccc
Q 042731 159 FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKFG---RPVWPIGPV 235 (481)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~vGpl 235 (481)
...+.. ..... ...... .....+..++.+++.+-...+. +...++ .++..+...
T Consensus 160 --~~~~~~------~~~~~--------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~-----~~~~~g~~~~k~~vi~ng 216 (438)
T 3c48_A 160 --NSYRDD------SDTPE--------SEARRI--CEQQLVDNADVLAVNTQEEMQD-----LMHHYDADPDRISVVSPG 216 (438)
T ss_dssp --SCC----------CCHH--------HHHHHH--HHHHHHHHCSEEEESSHHHHHH-----HHHHHCCCGGGEEECCCC
T ss_pred --cccccc------cCCcc--------hHHHHH--HHHHHHhcCCEEEEcCHHHHHH-----HHHHhCCChhheEEecCC
Confidence 000000 00000 000111 1123455677777776543321 112121 335555543
Q ss_pred ccCccccccccccCCCChhhhhhhhcCCCCCeEEEEEccccccc-CHHHHHHHHHHHHhc--CCce-EEEEcCCCCCCCc
Q 042731 236 LLSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI-AASQMMQLAMALEAS--GKNF-IWVVRPPIGFDIN 311 (481)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~-i~~~~~~~~~~~~ 311 (481)
........ ..........+.+.-.+ ...+++..|+.... ..+.+.+.+..+... +.++ ++++|... .+
T Consensus 217 vd~~~~~~----~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~---~~ 288 (438)
T 3c48_A 217 ADVELYSP----GNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS---GP 288 (438)
T ss_dssp CCTTTSCC----C----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-----
T ss_pred ccccccCC----cccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCC---CC
Confidence 32210000 00000111333332222 33566777887542 344444444444432 2232 33444310 00
Q ss_pred chhhhcCCCchhHHHHhcc--CCCcEEEecccCHH---HhhcccCccceeecc---C-chhHHHHHHhCCcEEecccccc
Q 042731 312 SEFKANKWLPRGFEERIKC--SGQGLVVHKWAPQV---EILSHRSVSAFLSHC---G-WNSVLEALSHGVPIIGWPLAAE 382 (481)
Q Consensus 312 ~~~~~~~~l~~~~~~~~~~--~~~~~~v~~~ip~~---~ll~~~~v~~~I~HG---G-~gt~~eal~~GvP~l~~P~~~D 382 (481)
+ ...+.+....+. ...++.+.+++++. .++..+++ +|.-. | -++++||+++|+|+|+.+.
T Consensus 289 g------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~--- 357 (438)
T 3c48_A 289 N------ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV--- 357 (438)
T ss_dssp ----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC---
T ss_pred C------cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC---
Confidence 0 012233332221 13578899999874 57878776 66543 3 4589999999999999754
Q ss_pred hhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHH
Q 042731 383 QFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVII 441 (481)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~ 441 (481)
......+.+. +.|..++. -+.+.++++|.++++|++..+.+.+++++..+.+
T Consensus 358 -~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 358 -GGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp -TTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -CChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 3344445534 57877765 3789999999999999866666777777776664
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.14 E-value=2.8e-09 Score=104.82 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=60.8
Q ss_pred CcEEEecccCH---HHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccC
Q 042731 333 QGLVVHKWAPQ---VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVL 409 (481)
Q Consensus 333 ~~~~v~~~ip~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~ 409 (481)
.++.+.+++++ ..+++.+++ +|+++| |.+.||+++|+|+|+.+..++++.. .+. |.|+.+. .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CC
Confidence 57888866655 478888776 898884 4466999999999998876666652 346 8887663 27
Q ss_pred HHHHHHHHHHHhcCC
Q 042731 410 KEDLSAKIELVMNET 424 (481)
Q Consensus 410 ~~~l~~~i~~vl~~~ 424 (481)
++.|+++|.++++|+
T Consensus 321 ~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 321 PEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 899999999999987
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.12 E-value=1.1e-07 Score=93.70 Aligned_cols=317 Identities=12% Similarity=0.030 Sum_probs=171.2
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcchhh--hhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNLKK--LKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQA 81 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 81 (481)
|.-.-+..|++.| +||+|++++....... ..... .++.+..++.. .. ... .
T Consensus 20 G~~~~~~~l~~~L---~g~~v~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~----------~~~---~----- 72 (394)
T 3okp_A 20 GIQSYLRDFIATQ---DPESIVVFASTQNAEEAHAYDKT---LDYEVIRWPRS---VM----------LPT---P----- 72 (394)
T ss_dssp HHHHHHHHHHTTS---CGGGEEEEEECSSHHHHHHHHTT---CSSEEEEESSS---SC----------CSC---H-----
T ss_pred hHHHHHHHHHHHh---cCCeEEEEECCCCccchhhhccc---cceEEEEcccc---cc----------ccc---h-----
Confidence 4445566777777 4999999997655431 11111 56777776631 00 000 1
Q ss_pred HhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEech-hHHHHHHHHHhhhcCCCCCCCCCc
Q 042731 82 SASLEPHFKKLISELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFIGG-GGFGFACLYSMLLNLPHRSTDSDE 158 (481)
Q Consensus 82 ~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~ 158 (481)
.....+.+++++. +||+|++....+ +...+++++|+|.+++... ....
T Consensus 73 --~~~~~l~~~~~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------------- 123 (394)
T 3okp_A 73 --TTAHAMAEIIRER-------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-------------------- 123 (394)
T ss_dssp --HHHHHHHHHHHHT-------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--------------------
T ss_pred --hhHHHHHHHHHhc-------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--------------------
Confidence 2334557788888 999999875443 4566788899985543322 1110
Q ss_pred cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhc--CCCeeeecccc
Q 042731 159 FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKF--GRPVWPIGPVL 236 (481)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~vGpl~ 236 (481)
+. ........ ....+..++.+++.+-...+ .+...+ ..++..+....
T Consensus 124 -----------~~-------------~~~~~~~~--~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~~~vi~ngv 172 (394)
T 3okp_A 124 -----------WS-------------MLPGSRQS--LRKIGTEVDVLTYISQYTLR-----RFKSAFGSHPTFEHLPSGV 172 (394)
T ss_dssp -----------HT-------------TSHHHHHH--HHHHHHHCSEEEESCHHHHH-----HHHHHHCSSSEEEECCCCB
T ss_pred -----------hh-------------hcchhhHH--HHHHHHhCCEEEEcCHHHHH-----HHHHhcCCCCCeEEecCCc
Confidence 00 00011111 11234566777766654332 112222 23555555433
Q ss_pred cCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccc-cCHHHHHHHHHHHHhc--CCceEEEEcCCCCCCCcch
Q 042731 237 LSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IAASQMMQLAMALEAS--GKNFIWVVRPPIGFDINSE 313 (481)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~ 313 (481)
...... .........+.+.+.-. ++..+++..|+... ...+.+.+.+..+... +..+++ +|.+.
T Consensus 173 ~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~------- 239 (394)
T 3okp_A 173 DVKRFT----PATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGR------- 239 (394)
T ss_dssp CTTTSC----CCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT-------
T ss_pred CHHHcC----CCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCch-------
Confidence 221000 00001122333333322 23356677788753 2344444444444443 344443 34331
Q ss_pred hhhcCCCchhHHHHhccCCCcEEEecccCHH---HhhcccCccceee-----------ccCchhHHHHHHhCCcEEeccc
Q 042731 314 FKANKWLPRGFEERIKCSGQGLVVHKWAPQV---EILSHRSVSAFLS-----------HCGWNSVLEALSHGVPIIGWPL 379 (481)
Q Consensus 314 ~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~---~ll~~~~v~~~I~-----------HGG~gt~~eal~~GvP~l~~P~ 379 (481)
..+.+.........++.+.+++|+. .++..+++ +|. -|.-+++.||+++|+|+|+.+.
T Consensus 240 ------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~ 311 (394)
T 3okp_A 240 ------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTS 311 (394)
T ss_dssp ------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSS
T ss_pred ------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCC
Confidence 2223333222114688999999864 47778776 665 4445689999999999999765
Q ss_pred ccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Q 042731 380 AAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKV 439 (481)
Q Consensus 380 ~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~ 439 (481)
.+ ....+. . |.|..++. -+.+.++++|.++++|++..+.+.+++++...
T Consensus 312 ~~----~~e~i~-~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 312 GG----APETVT-P-ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp TT----GGGGCC-T-TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CC----hHHHHh-c-CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 43 222222 4 56776654 36899999999999998555566666665544
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.11 E-value=1.7e-08 Score=100.16 Aligned_cols=145 Identities=10% Similarity=0.069 Sum_probs=89.8
Q ss_pred EEEEEcccc-cc-cCHHHHHHHHHHHHhc--CCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCH
Q 042731 268 VLYVSFGSQ-NT-IAASQMMQLAMALEAS--GKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQ 343 (481)
Q Consensus 268 ~V~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~ 343 (481)
.+++..|+. .. ...+.+.+.+..+... +..+ +++|... . +.+....+....++.+.+++++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~~~-------------~-~~l~~~~~~~~~~v~~~g~~~~ 273 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRGD-------------E-DELREQAGDLAGHLRFLGQVDD 273 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE-EEESCSC-------------H-HHHHHHTGGGGGGEEECCSCCH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE-EEEcCCc-------------H-HHHHHHHHhccCcEEEEecCCH
Confidence 466677877 43 2344444444444433 3333 3444431 1 3344333321467889999998
Q ss_pred H---HhhcccCccceee----ccCc-hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHH
Q 042731 344 V---EILSHRSVSAFLS----HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSA 415 (481)
Q Consensus 344 ~---~ll~~~~v~~~I~----HGG~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~ 415 (481)
. .++..+++ +|. +.|+ +++.||+++|+|+|+.+. ......+.+. +.|..++. -+.+.+.+
T Consensus 274 ~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~l~~ 341 (406)
T 2gek_A 274 ATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-----DDADGMAA 341 (406)
T ss_dssp HHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-----TCHHHHHH
T ss_pred HHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-----CCHHHHHH
Confidence 5 68888887 553 3344 489999999999999755 4445555544 57777754 36899999
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHH
Q 042731 416 KIELVMNETEKGTDLRNKANEVKV 439 (481)
Q Consensus 416 ~i~~vl~~~~~~~~~~~~a~~~~~ 439 (481)
+|.++++|++..+.+.+++++..+
T Consensus 342 ~i~~l~~~~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 342 ALIGILEDDQLRAGYVARASERVH 365 (406)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHH
Confidence 999999988444445555544433
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.10 E-value=6.3e-08 Score=95.77 Aligned_cols=322 Identities=11% Similarity=0.085 Sum_probs=166.8
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHh
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASA 83 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 83 (481)
|.-.-...|++.|.+ +||+|++++...... ... .. .++.+..++.. ..+. .... ...+
T Consensus 28 G~~~~~~~la~~L~~-~G~~V~v~~~~~~~~-~~~-~~--~~i~~~~~~~~----~~~~-------~~~~-~~~~----- 85 (394)
T 2jjm_A 28 GSGVVGTELGKQLAE-RGHEIHFITSGLPFR-LNK-VY--PNIYFHEVTVN----QYSV-------FQYP-PYDL----- 85 (394)
T ss_dssp HHHHHHHHHHHHHHH-TTCEEEEECSSCC-----C-CC--TTEEEECCCCC---------------CCSC-CHHH-----
T ss_pred CHHHHHHHHHHHHHh-CCCEEEEEeCCCCCc-ccc-cC--CceEEEecccc----cccc-------cccc-cccH-----
Confidence 344566789999999 999999999753221 111 11 56776655532 1110 0000 0111
Q ss_pred hhhHHHHHHHHHHhhccCCCCccEEEeCCCCc--hHHHHHHHh---CCceEEEechhHHHHHHHHHhhhcCCCCCCCCCc
Q 042731 84 SLEPHFKKLISELVNEQNGQKPLCIITDTFLG--WCKETAQEY---GIFHAIFIGGGGFGFACLYSMLLNLPHRSTDSDE 158 (481)
Q Consensus 84 ~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~l---giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (481)
.....+.+++++. +||+|++..... +...++..+ ++|.|......... .
T Consensus 86 ~~~~~l~~~l~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~---------~---------- 139 (394)
T 2jjm_A 86 ALASKMAEVAQRE-------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT---------V---------- 139 (394)
T ss_dssp HHHHHHHHHHHHH-------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------T----------
T ss_pred HHHHHHHHHHHHc-------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------c----------
Confidence 1233456778888 999999875433 233445443 59998766532110 0
Q ss_pred cccCCCCCCCccccCccChhhhcCCCCChHHHHHHHHHHhhccCceEEEccchhhhhhHHHHHHhhc--CCCeeeecccc
Q 042731 159 FLLPDFPEASTLHVTQISPYLRATDGSDSFSVFYKKLLLLWKDADGILVNTVEELDKIGLMYFKRKF--GRPVWPIGPVL 236 (481)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~vGpl~ 236 (481)
.+.. ..+.... ...+..++.+++.+-...+ .+...+ ..++..+....
T Consensus 140 ---~~~~--------------------~~~~~~~---~~~~~~ad~ii~~s~~~~~-----~~~~~~~~~~~~~vi~ngv 188 (394)
T 2jjm_A 140 ---LGSD--------------------PSLNNLI---RFGIEQSDVVTAVSHSLIN-----ETHELVKPNKDIQTVYNFI 188 (394)
T ss_dssp ---TTTC--------------------TTTHHHH---HHHHHHSSEEEESCHHHHH-----HHHHHTCCSSCEEECCCCC
T ss_pred ---cCCC--------------------HHHHHHH---HHHHhhCCEEEECCHHHHH-----HHHHhhCCcccEEEecCCc
Confidence 0000 0001111 1234557777766653322 122222 24566665433
Q ss_pred cCccccccccccCCCChhhhhhhhcCCCCCeEEEEEcccccc-cCHHHHHHHHHHHHhc-CCceEEEEcCCCCCCCcchh
Q 042731 237 LSTESRAGARKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSEF 314 (481)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~ 314 (481)
...... ......+.+.+.-. ++..+++..|.... ...+.+.+.+..+... +..+ +++|.+.
T Consensus 189 ~~~~~~-------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~-------- 251 (394)
T 2jjm_A 189 DERVYF-------KRDMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDGP-------- 251 (394)
T ss_dssp CTTTCC-------CCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE-EEECCCT--------
T ss_pred cHHhcC-------CcchHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEE-EEECCch--------
Confidence 222000 01122333333221 12345666788753 2334444444444433 4433 4444331
Q ss_pred hhcCCCchhHHHHhccC--CCcEEEecccCH-HHhhcccCcccee----eccCchhHHHHHHhCCcEEecccccchhhhH
Q 042731 315 KANKWLPRGFEERIKCS--GQGLVVHKWAPQ-VEILSHRSVSAFL----SHCGWNSVLEALSHGVPIIGWPLAAEQFYNS 387 (481)
Q Consensus 315 ~~~~~l~~~~~~~~~~~--~~~~~v~~~ip~-~~ll~~~~v~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na 387 (481)
..+.+.+..+.. ..++.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+.+..+ ..
T Consensus 252 -----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~ 320 (394)
T 2jjm_A 252 -----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IP 320 (394)
T ss_dssp -----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----ST
T ss_pred -----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hH
Confidence 122333332211 246667676554 468888886 66 3455578999999999999987532 22
Q ss_pred HHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 042731 388 KLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVK 438 (481)
Q Consensus 388 ~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~ 438 (481)
..+.+. +.|..++. -+.+.++++|.++++|++..+.+.+++++..
T Consensus 321 e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 321 EVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp TTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 233323 57777765 3689999999999998855555666666554
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.08 E-value=1.3e-07 Score=94.48 Aligned_cols=165 Identities=11% Similarity=0.061 Sum_probs=101.4
Q ss_pred EEEEEccccc-c-cCHHHHHHHHHHHHhcC--Cce-EEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccC
Q 042731 268 VLYVSFGSQN-T-IAASQMMQLAMALEASG--KNF-IWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAP 342 (481)
Q Consensus 268 ~V~vs~Gs~~-~-~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip 342 (481)
.+++..|+.. . ...+.+.+.+..+...+ .++ ++++|.+. ....+.+....+..+..+.+.+|++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~-----------~~~~~~l~~~~~~~~~~~~~~g~~~ 320 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD-----------PELEGWARSLEEKHGNVKVITEMLS 320 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC-----------HHHHHHHHHHHHHCTTEEEECSCCC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC-----------hhHHHHHHHHHhhcCCEEEEcCCCC
Confidence 6777888886 4 34555555566665532 233 23344331 0011233333332245566778899
Q ss_pred HH---HhhcccCccceeec---cC-chhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHH
Q 042731 343 QV---EILSHRSVSAFLSH---CG-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSA 415 (481)
Q Consensus 343 ~~---~ll~~~~v~~~I~H---GG-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~ 415 (481)
+. .++..+++ +|.- .| -++++||+++|+|+|+... ......+. . |.|..++. -+.+.+++
T Consensus 321 ~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~-----~d~~~la~ 387 (439)
T 3fro_A 321 REFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKA-----GDPGELAN 387 (439)
T ss_dssp HHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEECT-----TCHHHHHH
T ss_pred HHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeCC-----CCHHHHHH
Confidence 85 46777776 6643 23 3689999999999999744 33444443 5 78888865 37899999
Q ss_pred HHHHHhc-CChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHh
Q 042731 416 KIELVMN-ETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALI 468 (481)
Q Consensus 416 ~i~~vl~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 468 (481)
+|.++++ +++..+.+.+++++..+.+ +....++++++.+.+
T Consensus 388 ~i~~ll~~~~~~~~~~~~~~~~~~~~~------------s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 388 AILKALELSRSDLSKFRENCKKRAMSF------------SWEKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHHHHTTTTTHHHHHHHHHHHHTS------------CHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhC------------cHHHHHHHHHHHHHH
Confidence 9999999 8766667777777666332 244455555555443
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.99 E-value=8.8e-09 Score=102.10 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=60.1
Q ss_pred CCcEEEecccCH---HHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCccc
Q 042731 332 GQGLVVHKWAPQ---VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEV 408 (481)
Q Consensus 332 ~~~~~v~~~ip~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~ 408 (481)
..++.+.+++++ ..++..+++ +|+-+| |.+.||.++|+|+|+.....+++. +.+. |.++.+..
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~------ 352 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT------ 352 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC------
Confidence 357888777754 467888776 999988 666899999999999865555542 3347 88755532
Q ss_pred CHHHHHHHHHHHhcCC
Q 042731 409 LKEDLSAKIELVMNET 424 (481)
Q Consensus 409 ~~~~l~~~i~~vl~~~ 424 (481)
+++.|.++|.++++|+
T Consensus 353 d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 353 NQQQICDALSLLLTDP 368 (396)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCH
Confidence 6899999999999988
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.98 E-value=4.4e-09 Score=103.69 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=60.6
Q ss_pred CcEEEecccCH---HHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccC
Q 042731 333 QGLVVHKWAPQ---VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVL 409 (481)
Q Consensus 333 ~~~~v~~~ip~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~ 409 (481)
.++.+.+++++ ..++..+++ +|+.+| ++++||+++|+|+|+.+..++.+. +.+. |.|+.++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~------d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT------D 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS------S
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC------C
Confidence 57888666665 467888886 898885 448899999999999987444333 3447 88877753 7
Q ss_pred HHHHHHHHHHHhcCC
Q 042731 410 KEDLSAKIELVMNET 424 (481)
Q Consensus 410 ~~~l~~~i~~vl~~~ 424 (481)
++.|+++|.++++|+
T Consensus 329 ~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 329 KQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 899999999999988
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.97 E-value=2.6e-08 Score=98.82 Aligned_cols=79 Identities=18% Similarity=0.131 Sum_probs=61.2
Q ss_pred CCcEEEecccCH---HHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCccc
Q 042731 332 GQGLVVHKWAPQ---VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEV 408 (481)
Q Consensus 332 ~~~~~v~~~ip~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~ 408 (481)
..++.+.+++++ ..++..+++ +|+..|.. +.||.++|+|+|++|...+++.. .+. |.|+.+..
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e~----v~~-g~~~lv~~------ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPEG----IEA-GTLKLIGT------ 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHHH----HHH-TSEEECCS------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchhh----eeC-CcEEEcCC------
Confidence 357888898874 467888776 89887533 37999999999999766666652 347 88876642
Q ss_pred CHHHHHHHHHHHhcCC
Q 042731 409 LKEDLSAKIELVMNET 424 (481)
Q Consensus 409 ~~~~l~~~i~~vl~~~ 424 (481)
+++.|.++|.++++|+
T Consensus 347 d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 347 NKENLIKEALDLLDNK 362 (403)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCH
Confidence 7999999999999988
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.93 E-value=1.6e-06 Score=84.62 Aligned_cols=97 Identities=12% Similarity=0.184 Sum_probs=73.3
Q ss_pred CcEEEecccCH-HHhhcccCccceee----ccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcc
Q 042731 333 QGLVVHKWAPQ-VEILSHRSVSAFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCE 407 (481)
Q Consensus 333 ~~~~v~~~ip~-~~ll~~~~v~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~ 407 (481)
.++.+.++..+ ..++..+++ +|. -|.-++++||+++|+|+|+.+. ..+...+++. +.|..+.. .
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~ 321 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----P 321 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----S
T ss_pred CcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----C
Confidence 57888888655 468888886 665 3556789999999999999765 3455667766 88988862 2
Q ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 042731 408 VLKEDLSAKIELVMNETEKGTDLRNKANEVKVI 440 (481)
Q Consensus 408 ~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~ 440 (481)
-+.+.++++|.++++|++..+.+.+++++..+.
T Consensus 322 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 322 FSQEQLNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 478999999999999985566677777766654
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.90 E-value=3.4e-07 Score=93.60 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=68.5
Q ss_pred CCcEEEecccCHH---Hhhccc----Cccceeecc---Cc-hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEe
Q 042731 332 GQGLVVHKWAPQV---EILSHR----SVSAFLSHC---GW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEI 400 (481)
Q Consensus 332 ~~~~~v~~~ip~~---~ll~~~----~v~~~I~HG---G~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~ 400 (481)
.+++.+.+++|+. .++..+ ++ +|.-. |. .+++||+++|+|+|+... ......+... ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 3578889999864 477777 76 66432 43 589999999999999854 3344444433 478877
Q ss_pred eccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 042731 401 ARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVI 440 (481)
Q Consensus 401 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~ 440 (481)
+. -+.+.++++|.++++|++..+.+.+++++....
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 65 368999999999999885555566666655443
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.84 E-value=1.8e-07 Score=92.11 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=82.1
Q ss_pred CeEEEEEcccccccC-HHHHHHHHHHHHhc----CCceEEEEcCCCCCCCcchhhhcCCCchhHHHH---hccCCCcEEE
Q 042731 266 TSVLYVSFGSQNTIA-ASQMMQLAMALEAS----GKNFIWVVRPPIGFDINSEFKANKWLPRGFEER---IKCSGQGLVV 337 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~v 337 (481)
++.|++++|...... .+.+..+++++... +..+|+...+. +.+.+.+. .. ...++.+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------------~~~~l~~~~~~~~-~~~~v~l 267 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------------TKKRLEDLEGFKE-LGDKIRF 267 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------------HHHHHHTSGGGGG-TGGGEEE
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------------HHHHHHHHHHHhc-CCCCEEE
Confidence 558888887754322 24455666666542 55666655321 00111110 10 0246777
Q ss_pred ecccCH---HHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHH
Q 042731 338 HKWAPQ---VEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLS 414 (481)
Q Consensus 338 ~~~ip~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~ 414 (481)
.+.+++ ..++..+++ +|+-.|. .+.||.++|+|+|+++...+.+. . .+. |.++.+.. +++.|.
T Consensus 268 ~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~-v~~-G~~~lv~~------d~~~i~ 333 (385)
T 4hwg_A 268 LPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---G-MDA-GTLIMSGF------KAERVL 333 (385)
T ss_dssp CCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---H-HHH-TCCEECCS------SHHHHH
T ss_pred EcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---h-hhc-CceEEcCC------CHHHHH
Confidence 665554 568888776 9998875 46999999999999987554333 2 347 87766643 689999
Q ss_pred HHHHHHhcCC
Q 042731 415 AKIELVMNET 424 (481)
Q Consensus 415 ~~i~~vl~~~ 424 (481)
+++.++++|+
T Consensus 334 ~ai~~ll~d~ 343 (385)
T 4hwg_A 334 QAVKTITEEH 343 (385)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCh
Confidence 9999999987
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.67 E-value=4.6e-06 Score=81.50 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=58.3
Q ss_pred CcEEEecccCHH---HhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccC
Q 042731 333 QGLVVHKWAPQV---EILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVL 409 (481)
Q Consensus 333 ~~~~v~~~ip~~---~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~ 409 (481)
.++.+.+++++. .++..+++ +|+.+| +++.||+++|+|+|+.+..+..+. +.+. |.|..++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~~-g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIEA-GTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHHT-TSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eecC-CceEEcCC------C
Confidence 578887777753 57777776 888764 458899999999999854333322 3446 87776642 7
Q ss_pred HHHHHHHHHHHhcCC
Q 042731 410 KEDLSAKIELVMNET 424 (481)
Q Consensus 410 ~~~l~~~i~~vl~~~ 424 (481)
++.|+++|.++++|+
T Consensus 329 ~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 329 EETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 899999999999987
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.66 E-value=1.8e-05 Score=78.55 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=64.8
Q ss_pred CCcEEEecccC---H---HHhhcccCccceeecc----CchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEee
Q 042731 332 GQGLVVHKWAP---Q---VEILSHRSVSAFLSHC----GWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIA 401 (481)
Q Consensus 332 ~~~~~v~~~ip---~---~~ll~~~~v~~~I~HG----G~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~ 401 (481)
..++.+.+|++ + ..++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36888888776 2 357777776 66544 34689999999999999764 3344444433 5666552
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 042731 402 RGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVK 438 (481)
Q Consensus 402 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~ 438 (481)
+.+.++++|.++++|++..+.+.+++++..
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 689999999999999854445565655544
No 39
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.57 E-value=2e-05 Score=77.21 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=71.8
Q ss_pred cEEEecccCH-HHhhcccCccceeec-----cCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcc
Q 042731 334 GLVVHKWAPQ-VEILSHRSVSAFLSH-----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCE 407 (481)
Q Consensus 334 ~~~v~~~ip~-~~ll~~~~v~~~I~H-----GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~ 407 (481)
++.+.++... ..+++.+++ ++.- +|-.++.||+++|+|+|+-|...+.+.....+.+. |.++.+.
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 4555555444 468888776 4431 23478999999999999877777777766655546 7766553
Q ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH
Q 042731 408 VLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIK 442 (481)
Q Consensus 408 ~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~ 442 (481)
+++.|+++|.++++| +..+.|.+++++..+.-.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 479999999999998 677789999988877654
No 40
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.56 E-value=2.5e-06 Score=82.44 Aligned_cols=125 Identities=15% Similarity=0.141 Sum_probs=77.5
Q ss_pred EEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHH---H
Q 042731 269 LYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQV---E 345 (481)
Q Consensus 269 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~---~ 345 (481)
+++..|+... ...+..++++++..+.+++++ |.+. ..+.+.+..+..+.++.+.+|+++. .
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAW-------------EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCC-------------CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcc-------------cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 4455677653 222445556666556665554 4331 2223333222114789999999986 6
Q ss_pred hhcccCccceee-------------ccCc-hhHHHHHHhCCcEEecccccchhhhHHHHHH--HhcceEEeeccCCcccC
Q 042731 346 ILSHRSVSAFLS-------------HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEE--EMGVCVEIARGMSCEVL 409 (481)
Q Consensus 346 ll~~~~v~~~I~-------------HGG~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~lG~G~~~~~~~~~~~~ 409 (481)
++..+++ +|. +-|. +++.||+++|+|+|+... ......+.+ . +.|..++ . +
T Consensus 228 ~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d 294 (342)
T 2iuy_A 228 LLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-A 294 (342)
T ss_dssp HHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-C
T ss_pred HHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-C
Confidence 7888887 553 2343 579999999999999865 334445543 2 3454442 3 7
Q ss_pred HHHHHHHHHHHhc
Q 042731 410 KEDLSAKIELVMN 422 (481)
Q Consensus 410 ~~~l~~~i~~vl~ 422 (481)
.+.++++|.++++
T Consensus 295 ~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 295 PDEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999986
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.48 E-value=1.2e-05 Score=86.03 Aligned_cols=94 Identities=9% Similarity=0.062 Sum_probs=61.1
Q ss_pred CcEEEecc----cCHHHhhc----ccCccceeec---cC-chhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEe
Q 042731 333 QGLVVHKW----APQVEILS----HRSVSAFLSH---CG-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEI 400 (481)
Q Consensus 333 ~~~~v~~~----ip~~~ll~----~~~v~~~I~H---GG-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~ 400 (481)
+++.+.++ +++.++.. .+++ +|.- -| -.++.||+++|+|+|+. |.......+.+. ..|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEe
Confidence 57777774 44455444 3444 6643 23 35899999999999996 334444455434 578888
Q ss_pred eccCCcccCHHHHHHHHHHHh----cCChhhHHHHHHHHHHH
Q 042731 401 ARGMSCEVLKEDLSAKIELVM----NETEKGTDLRNKANEVK 438 (481)
Q Consensus 401 ~~~~~~~~~~~~l~~~i~~vl----~~~~~~~~~~~~a~~~~ 438 (481)
+. -+.+.++++|.+++ .|++..+.+.+++++..
T Consensus 713 ~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 DP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp CT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 75 36888999997776 88855455555555544
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.32 E-value=8e-05 Score=75.48 Aligned_cols=164 Identities=10% Similarity=-0.000 Sum_probs=91.1
Q ss_pred EEEEEcccccc-cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEE-EecccCHH-
Q 042731 268 VLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLV-VHKWAPQV- 344 (481)
Q Consensus 268 ~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-v~~~ip~~- 344 (481)
.+++..|.... ...+.+.+.+..+...+..++++-.+. ..+.+.+.+..+..+.++. +.++ +..
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 359 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------------PVLQEGFLAAAAEYPGQVGVQIGY-HEAF 359 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------------HHHHHHHHHHHHHSTTTEEEEESC-CHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------------hHHHHHHHHHHHhCCCcEEEeCCC-CHHH
Confidence 46666777653 234444444444444455655543221 0011233333332245675 6677 443
Q ss_pred --HhhcccCccceeecc---C-chhHHHHHHhCCcEEecccccchhhhHHHHHHHh---------cceEEeeccCCcccC
Q 042731 345 --EILSHRSVSAFLSHC---G-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEM---------GVCVEIARGMSCEVL 409 (481)
Q Consensus 345 --~ll~~~~v~~~I~HG---G-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~G~~~~~~~~~~~~ 409 (481)
.++..+++ +|.-. | -.+++||+++|+|+|+.... .....+. .- +.|..++. -+
T Consensus 360 ~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d 427 (485)
T 2qzs_A 360 SHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVS-DCSLENLADGVASGFVFED-----SN 427 (485)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCC-BCCHHHHHTTCCCBEEECS-----SS
T ss_pred HHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceec-cCccccccccccceEEECC-----CC
Confidence 57888776 66332 3 35788999999999998542 2333333 30 36777764 36
Q ss_pred HHHHHHHHHHHh---cCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhhh
Q 042731 410 KEDLSAKIELVM---NETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIMR 470 (481)
Q Consensus 410 ~~~l~~~i~~vl---~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 470 (481)
.+.|+++|.+++ +|++..+.+.+++. .+.-|-...++++++.+.+..
T Consensus 428 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~--------------~~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 428 AWSLLRAIRRAFVLWSRPSLWRFVQRQAM--------------AMDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHHH--------------HCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH--------------hhcCCHHHHHHHHHHHHHHhh
Confidence 899999999999 67633333333332 124445555666666655443
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.29 E-value=7.7e-06 Score=70.99 Aligned_cols=128 Identities=9% Similarity=0.053 Sum_probs=81.5
Q ss_pred EEEEcccccccCHHHHHHHHHHHHhc-CCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhc----cCCCcEEEecccCH
Q 042731 269 LYVSFGSQNTIAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIK----CSGQGLVVHKWAPQ 343 (481)
Q Consensus 269 V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~v~~~ip~ 343 (481)
+++..|+... ...+..+++++... +.+++++ +... ..+.+....+ ....++.+.+|+++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~-------------~~~~l~~~~~~~~~~l~~~v~~~g~~~~ 88 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFS-------------KGDHAERYARKIMKIAPDNVKFLGSVSE 88 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCC-------------TTSTHHHHHHHHHHHSCTTEEEEESCCH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCc-------------cHHHHHHHHHhhhcccCCcEEEeCCCCH
Confidence 5566777753 22344566666665 4555554 4331 1011211111 11458889999998
Q ss_pred ---HHhhcccCccceee---ccCc-hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHH
Q 042731 344 ---VEILSHRSVSAFLS---HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAK 416 (481)
Q Consensus 344 ---~~ll~~~~v~~~I~---HGG~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~ 416 (481)
..++..+++ +|. +.|+ .+++||+++|+|+|+... ..+...+.+. +.|..+ . -+.+.++++
T Consensus 89 ~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~ 155 (177)
T 2f9f_A 89 EELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDA 155 (177)
T ss_dssp HHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHH
T ss_pred HHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHH
Confidence 468888886 665 3454 489999999999999754 3444445534 577777 4 268999999
Q ss_pred HHHHhcCCh
Q 042731 417 IELVMNETE 425 (481)
Q Consensus 417 i~~vl~~~~ 425 (481)
|.++++|++
T Consensus 156 i~~l~~~~~ 164 (177)
T 2f9f_A 156 MKKVSKNPD 164 (177)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCHH
Confidence 999999883
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.24 E-value=0.00041 Score=70.15 Aligned_cols=162 Identities=9% Similarity=-0.031 Sum_probs=90.7
Q ss_pred EEEEEccccccc-CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEE-EecccCHH-
Q 042731 268 VLYVSFGSQNTI-AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLV-VHKWAPQV- 344 (481)
Q Consensus 268 ~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-v~~~ip~~- 344 (481)
.+++..|..... ..+.+.+.+..+...+..++++-.+. ..+.+.+....+..+.++. +.++ +..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 358 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------------VALEGALLAAASRHHGRVGVAIGY-NEPL 358 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------------HHHHHHHHHHHHHTTTTEEEEESC-CHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------------hHHHHHHHHHHHhCCCcEEEecCC-CHHH
Confidence 367777887643 24444444444444455555543221 0011233333332245676 5677 543
Q ss_pred --HhhcccCccceeec----cCchhHHHHHHhCCcEEecccccchhhhHHHHHHHh---------cceEEeeccCCcccC
Q 042731 345 --EILSHRSVSAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEM---------GVCVEIARGMSCEVL 409 (481)
Q Consensus 345 --~ll~~~~v~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~G~~~~~~~~~~~~ 409 (481)
.++..+++ +|.- |--.+++||+++|+|+|+.... .....+. .- +.|..++. -+
T Consensus 359 ~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d 426 (485)
T 1rzu_A 359 SHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVI-DANHAALASKAATGVQFSP-----VT 426 (485)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCC-BCCHHHHHTTCCCBEEESS-----CS
T ss_pred HHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheec-ccccccccccCCcceEeCC-----CC
Confidence 57888776 6633 2235899999999999997542 2333332 30 36766654 36
Q ss_pred HHHHHHHHHHHh---cCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHh
Q 042731 410 KEDLSAKIELVM---NETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALI 468 (481)
Q Consensus 410 ~~~l~~~i~~vl---~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 468 (481)
.+.|+++|.+++ +|++..+.+.+++ + ++.-|-...++++++.+.+
T Consensus 427 ~~~la~~i~~ll~~~~~~~~~~~~~~~~-------~-------~~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 427 LDGLKQAIRRTVRYYHDPKLWTQMQKLG-------M-------KSDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHH-------H-------TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHH-------H-------HHhCChHHHHHHHHHHHHH
Confidence 899999999999 6762222333333 2 2244455555666655543
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.94 E-value=0.0016 Score=64.10 Aligned_cols=88 Identities=9% Similarity=0.104 Sum_probs=57.1
Q ss_pred EEEecccCHH---HhhcccCccceeec---cC-chhHHHHHHhCCcEEecccccchhhhHHHHHHHhcc-----------
Q 042731 335 LVVHKWAPQV---EILSHRSVSAFLSH---CG-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGV----------- 396 (481)
Q Consensus 335 ~~v~~~ip~~---~ll~~~~v~~~I~H---GG-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~----------- 396 (481)
+.+.+|+++. .++..+++ +|.- -| -.++.||+++|+|+|+.... .....+. . |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~-~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFS-G-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSC-T-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHc-c-Ccccccccccccc
Confidence 6777999954 47778776 5532 22 35899999999999996543 2333333 2 22
Q ss_pred -----eE--EeeccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHH
Q 042731 397 -----CV--EIARGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANE 436 (481)
Q Consensus 397 -----G~--~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~ 436 (481)
|. .+.. -+.+.++++| ++++|++..+.+.+++++
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQD 368 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 44 5544 3799999999 999988333334333333
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.80 E-value=0.00021 Score=60.75 Aligned_cols=146 Identities=16% Similarity=0.141 Sum_probs=85.1
Q ss_pred eEEEEEcccccccCHHHHHHHHHHHHhcC--Cce-EEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCH
Q 042731 267 SVLYVSFGSQNTIAASQMMQLAMALEASG--KNF-IWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQ 343 (481)
Q Consensus 267 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~ 343 (481)
+++++..|..... ..+..+++++.... .++ ++.+|.+. ..+.+....+..+.++.+ +|+|+
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------------~~~~~~~~~~~~~~~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGKGP-------------DEKKIKLLAQKLGVKAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECCST-------------THHHHHHHHHHHTCEEEC-CCCCH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeCCc-------------cHHHHHHHHHHcCCeEEE-eecCH
Confidence 4677788887542 22344555555432 123 33344331 223333333322347777 99987
Q ss_pred H---HhhcccCccceeec---cC-chhHHHHHHhCC-cEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHH
Q 042731 344 V---EILSHRSVSAFLSH---CG-WNSVLEALSHGV-PIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSA 415 (481)
Q Consensus 344 ~---~ll~~~~v~~~I~H---GG-~gt~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~ 415 (481)
. .++..+++ +|.- -| -.++.||+++|+ |+|+....+. ....+... +. .+.. -+.+.+.+
T Consensus 66 ~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~-----~~~~~l~~ 132 (166)
T 3qhp_A 66 NELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP-----NNAKDLSA 132 (166)
T ss_dssp HHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT-----TCHHHHHH
T ss_pred HHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC-----CCHHHHHH
Confidence 4 47777776 6652 23 358999999996 9999432221 11111212 22 3332 47899999
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHH
Q 042731 416 KIELVMNETEKGTDLRNKANEVKVII 441 (481)
Q Consensus 416 ~i~~vl~~~~~~~~~~~~a~~~~~~~ 441 (481)
+|.++++|++..+.+.+++++..+.+
T Consensus 133 ~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 133 KIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 99999999866667777777766444
No 47
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.76 E-value=0.00053 Score=60.16 Aligned_cols=145 Identities=11% Similarity=0.086 Sum_probs=88.6
Q ss_pred EEEEccccc-cc-CHHHHHHHHHHHH--hc--CCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEE-eccc
Q 042731 269 LYVSFGSQN-TI-AASQMMQLAMALE--AS--GKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVV-HKWA 341 (481)
Q Consensus 269 V~vs~Gs~~-~~-~~~~~~~~~~al~--~~--~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v-~~~i 341 (481)
+++..|+.. .. ..+.+...+..+. .. +.+++ ++|... ....+.+....+..+ ++.+ .+++
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~-i~G~~~-----------~~~~~~l~~~~~~~~-~v~~~~g~~ 104 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGD-----------PELEGWARSLEEKHG-NVKVITEML 104 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEE-EECCBC-----------HHHHHHHHHHHHHCT-TEEEECSCC
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEE-EECCCC-----------hHHHHHHHHHHHhcC-CEEEEeccC
Confidence 666778876 43 3455555555553 22 23333 333320 001123333333223 7888 9999
Q ss_pred CHH---HhhcccCccceeecc---C-chhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHH
Q 042731 342 PQV---EILSHRSVSAFLSHC---G-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLS 414 (481)
Q Consensus 342 p~~---~ll~~~~v~~~I~HG---G-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~ 414 (481)
++. .++..+++ +|... | -.+++||+++|+|+|+.... .....+ .. +.|..++. -+.+.+.
T Consensus 105 ~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~-----~~~~~l~ 171 (200)
T 2bfw_A 105 SREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA-----GDPGELA 171 (200)
T ss_dssp CHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT-----TCHHHHH
T ss_pred CHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC-----CCHHHHH
Confidence 953 57878776 66433 3 35789999999999987543 334444 34 67777764 3789999
Q ss_pred HHHHHHhc-CChhhHHHHHHHHHHHH
Q 042731 415 AKIELVMN-ETEKGTDLRNKANEVKV 439 (481)
Q Consensus 415 ~~i~~vl~-~~~~~~~~~~~a~~~~~ 439 (481)
++|.++++ |++..+.+.+++++..+
T Consensus 172 ~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 172 NAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999999 98555566666666543
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.76 E-value=0.0011 Score=68.42 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=65.4
Q ss_pred CcEEEecccCHH---HhhcccCccceee---ccCchhHHHHHHhCCcEEecccccchhhh-HHHHHHHhcceEEeeccCC
Q 042731 333 QGLVVHKWAPQV---EILSHRSVSAFLS---HCGWNSVLEALSHGVPIIGWPLAAEQFYN-SKLLEEEMGVCVEIARGMS 405 (481)
Q Consensus 333 ~~~~v~~~ip~~---~ll~~~~v~~~I~---HGG~gt~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~lG~G~~~~~~~~ 405 (481)
+++.+.+++++. .++..+++ ||. .|+-.++.||+++|+|+|++|-..-.... +..+... |+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 578899999854 56778776 652 25557899999999999997653211111 3344433 66654432
Q ss_pred cccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Q 042731 406 CEVLKEDLSAKIELVMNETEKGTDLRNKANEVK 438 (481)
Q Consensus 406 ~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~ 438 (481)
+.+.+.++|.++++|++..+.+++++++..
T Consensus 508 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 789999999999999844445555555443
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.73 E-value=0.0011 Score=70.39 Aligned_cols=175 Identities=17% Similarity=0.162 Sum_probs=105.7
Q ss_pred CCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHh---ccCCCcEEEeccc
Q 042731 265 YTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERI---KCSGQGLVVHKWA 341 (481)
Q Consensus 265 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~v~~~i 341 (481)
...+||.+|-.....+++.+....+-|+..+..++|...... . ....+.... ....+.+++.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-------~-----~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-------V-----GEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-------G-----GHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-------H-----HHHHHHHHHHhcCCCcCeEEECCCC
Confidence 456999999999889999999999999999999999887552 0 111222211 1114567787888
Q ss_pred CHHH---hhcccCccceee---ccCchhHHHHHHhCCcEEecccccch-hhhHHHHHHHhcceEEeeccCCcccCHHHHH
Q 042731 342 PQVE---ILSHRSVSAFLS---HCGWNSVLEALSHGVPIIGWPLAAEQ-FYNSKLLEEEMGVCVEIARGMSCEVLKEDLS 414 (481)
Q Consensus 342 p~~~---ll~~~~v~~~I~---HGG~gt~~eal~~GvP~l~~P~~~DQ-~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~ 414 (481)
|..+ .+...++ ++. .+|.+|++|||++|||+|.++-..=- ..-+..+. .+|+...+.. +.++-.
T Consensus 589 ~~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~-~~gl~e~ia~------~~~~Y~ 659 (723)
T 4gyw_A 589 PKEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT-CLGCLELIAK------NRQEYE 659 (723)
T ss_dssp CHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH-HHTCGGGBCS------SHHHHH
T ss_pred CHHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH-HcCCcccccC------CHHHHH
Confidence 8654 3344444 554 78889999999999999999853322 22333344 4477765543 444444
Q ss_pred HHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhh
Q 042731 415 AKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIM 469 (481)
Q Consensus 415 ~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 469 (481)
+...++-+|++....+|++ +++.+..+ .-....+.+++|.+.++.+
T Consensus 660 ~~a~~la~d~~~l~~lr~~---l~~~~~~s------~l~d~~~~~~~le~a~~~~ 705 (723)
T 4gyw_A 660 DIAVKLGTDLEYLKKVRGK---VWKQRISS------PLFNTKQYTMELERLYLQM 705 (723)
T ss_dssp HHHHHHHHCHHHHHHHHHH---HHHHHHHS------STTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHH---HHHHHHhC------cCcCHHHHHHHHHHHHHHH
Confidence 4444666776333333333 23333222 1222455555555555544
No 50
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.31 E-value=0.066 Score=52.57 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=56.8
Q ss_pred CCcEEEecccCHH---HhhcccCccceee---ccCc-hhHHHHH-------HhCCcEEecccccchhhhHHHHHHHhcce
Q 042731 332 GQGLVVHKWAPQV---EILSHRSVSAFLS---HCGW-NSVLEAL-------SHGVPIIGWPLAAEQFYNSKLLEEEMGVC 397 (481)
Q Consensus 332 ~~~~~v~~~ip~~---~ll~~~~v~~~I~---HGG~-gt~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~lG~G 397 (481)
.+++.+.+++|+. .++..+++ +|. +.|. +++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 4678899999975 46777776 553 3344 5788999 99999999855 4433 457
Q ss_pred EE-eeccCCcccCHHHHHHHHHHHhcCC
Q 042731 398 VE-IARGMSCEVLKEDLSAKIELVMNET 424 (481)
Q Consensus 398 ~~-~~~~~~~~~~~~~l~~~i~~vl~~~ 424 (481)
.. +.. -+.+.|+++|.++++++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 66 654 36899999999999998
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.29 E-value=0.0035 Score=64.16 Aligned_cols=150 Identities=11% Similarity=0.073 Sum_probs=91.4
Q ss_pred eEEEEEcccccccCHHHHHHHHHHHHhcCCceEEE--EcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHH
Q 042731 267 SVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWV--VRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQV 344 (481)
Q Consensus 267 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~ 344 (481)
.++|.+|.......++.+.....-++..+..++|. .+... +... .+-..+.+ ... +..+++.+.+|..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g~~~--~~~~~~~~-~GI-~~Rv~F~g~~p~~ 510 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------GITH--PYVERFIK-SYL-GDSATAHPHSPYH 510 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------GGGH--HHHHHHHH-HHH-GGGEEEECCCCHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------hhhH--HHHHHHHH-cCC-CccEEEcCCCCHH
Confidence 58999999888788888888888888877777764 34221 0100 00011111 111 2456777888876
Q ss_pred H---hhcccCcccee---eccCchhHHHHHHhCCcEEecccccchhhh-HHHHHHHhcceEE-eeccCCcccCHHHHHHH
Q 042731 345 E---ILSHRSVSAFL---SHCGWNSVLEALSHGVPIIGWPLAAEQFYN-SKLLEEEMGVCVE-IARGMSCEVLKEDLSAK 416 (481)
Q Consensus 345 ~---ll~~~~v~~~I---~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~lG~G~~-~~~~~~~~~~~~~l~~~ 416 (481)
+ .+..+++ ++ ..+|..|++|||++|||+|..+-..=.-.. +..+. .+|+... +.. +.++..+.
T Consensus 511 e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~-~~GLpE~LIA~------d~eeYv~~ 581 (631)
T 3q3e_A 511 QYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK-RLGLPEWLIAN------TVDEYVER 581 (631)
T ss_dssp HHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH-HTTCCGGGEES------SHHHHHHH
T ss_pred HHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH-hcCCCcceecC------CHHHHHHH
Confidence 5 4466665 43 237789999999999999998754321122 22333 3366543 332 57777788
Q ss_pred HHHHhcCChhhHHHHHHHH
Q 042731 417 IELVMNETEKGTDLRNKAN 435 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~ 435 (481)
..++.+|++....++++++
T Consensus 582 Av~La~D~~~l~~LR~~Lr 600 (631)
T 3q3e_A 582 AVRLAENHQERLELRRYII 600 (631)
T ss_dssp HHHHHHCHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHH
Confidence 8888888844334444433
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.94 E-value=0.002 Score=61.79 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=78.2
Q ss_pred cEEEecccCHHHh---hcccCccceeeccCc---------hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEee
Q 042731 334 GLVVHKWAPQVEI---LSHRSVSAFLSHCGW---------NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIA 401 (481)
Q Consensus 334 ~~~v~~~ip~~~l---l~~~~v~~~I~HGG~---------gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~ 401 (481)
|+...+|+|+.++ |..++.+.+.+-+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 8999999999765 444455333333323 35789999999999854 56778888888 9999885
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHH
Q 042731 402 RGMSCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAA 466 (481)
Q Consensus 402 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 466 (481)
. .+++.++|..+.. ++.+.|++|+++.++.++ .+--..+++.+.+..+
T Consensus 290 ~-------~~e~~~~i~~l~~--~~~~~m~~na~~~a~~~~--------~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 D-------VEEAIMKVKNVNE--DEYIELVKNVRSFNPILR--------KGFFTRRLLTESVFQA 337 (339)
T ss_dssp S-------HHHHHHHHHHCCH--HHHHHHHHHHHHHTHHHH--------TTHHHHHHHHHHHHHH
T ss_pred C-------HHHHHHHHHHhCH--HHHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHh
Confidence 3 6788888887643 356789999999999886 2223455555555443
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.49 E-value=0.093 Score=50.34 Aligned_cols=95 Identities=12% Similarity=0.011 Sum_probs=60.3
Q ss_pred CCCChHHHHHHHHHHHhC-CCCEEEEEeCCcchhhhhhcCCCCCCeE-EEEecCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 042731 2 AQGHIIPFLALARRLEET-NKYTITLVNTPLNLKKLKSSLPQNSSIH-LLEIPFNSVEHDLPPCTENTDSIPYHLFPKFL 79 (481)
Q Consensus 2 ~~GHv~P~l~LA~~L~~~-~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 79 (481)
+.|++.=.+++.+.|+++ .+.+|++++.+.+.+.++.. +.++ ++.++.. . ...
T Consensus 18 ~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~~~--------------~-----~~~-- 72 (349)
T 3tov_A 18 HLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----PNIDELIVVDKK--------------G-----RHN-- 72 (349)
T ss_dssp CHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEECCS--------------S-----HHH--
T ss_pred cccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CCccEEEEeCcc--------------c-----ccc--
Confidence 357778888899999984 49999999999887777652 3443 4443310 0 000
Q ss_pred HHHhhhhHHHHHHHHHHhhccCCCCc-cEEEeCCCCchHHHHHHHhCCceEE
Q 042731 80 QASASLEPHFKKLISELVNEQNGQKP-LCIITDTFLGWCKETAQEYGIFHAI 130 (481)
Q Consensus 80 ~~~~~~~~~~~~ll~~~~~~~~~~~p-D~vI~D~~~~~~~~~A~~lgiP~v~ 130 (481)
.. ..+.++++++..+ ++ |++|.-....-...++...|+|..+
T Consensus 73 -~~----~~~~~l~~~Lr~~----~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 73 -SI----SGLNEVAREINAK----GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -HH----HHHHHHHHHHHHH----CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -cH----HHHHHHHHHHhhC----CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11 1122333333332 89 9999766666666788888999765
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.61 E-value=0.73 Score=43.71 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=56.7
Q ss_pred CCChHHHHHHHHHHHhC-CCCEEEEEeCCcchhhhhhcCCCCCCe-EEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 042731 3 QGHIIPFLALARRLEET-NKYTITLVNTPLNLKKLKSSLPQNSSI-HLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQ 80 (481)
Q Consensus 3 ~GHv~P~l~LA~~L~~~-~Gh~Vt~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 80 (481)
.|++.=...+.+.|+++ .+.+|++++.+.+.+.++.. +.+ +++.++.. . .. .
T Consensus 11 ~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~----p~i~~v~~~~~~-------~-------~~-----~--- 64 (348)
T 1psw_A 11 VGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM----PEVNEAIPMPLG-------H-------GA-----L--- 64 (348)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC----TTEEEEEEC-----------------------------
T ss_pred cCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CccCEEEEecCC-------c-------cc-----c---
Confidence 47787788899999983 49999999998777766542 334 33333210 0 00 0
Q ss_pred HHhhhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEE
Q 042731 81 ASASLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAI 130 (481)
Q Consensus 81 ~~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~ 130 (481)
....+.++++.+... ++|++|.-........++...|+|...
T Consensus 65 ----~~~~~~~l~~~l~~~----~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ----EIGERRKLGHSLREK----RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----CHHHHHHHHHHTTTT----TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----chHHHHHHHHHHHhc----CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011223444444333 899999433344566778888999754
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.38 E-value=0.24 Score=48.59 Aligned_cols=80 Identities=16% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCcEEEecccCHH---HhhcccCccceeecc---Cc-hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccC
Q 042731 332 GQGLVVHKWAPQV---EILSHRSVSAFLSHC---GW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGM 404 (481)
Q Consensus 332 ~~~~~v~~~ip~~---~ll~~~~v~~~I~HG---G~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~ 404 (481)
..++.+.+++++. .++..+++ ||.-. |. .+++||+++|+|+|+ -..+ ....+... ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 3477888999875 46777776 66432 44 467999999999998 3222 11233322 36777765
Q ss_pred CcccCHHHHHHHHHHHhcCC
Q 042731 405 SCEVLKEDLSAKIELVMNET 424 (481)
Q Consensus 405 ~~~~~~~~l~~~i~~vl~~~ 424 (481)
-+++.|+++|.++++|+
T Consensus 364 ---~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSF 380 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHHcCH
Confidence 37899999999999988
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.34 E-value=1.7 Score=44.05 Aligned_cols=136 Identities=9% Similarity=-0.032 Sum_probs=73.2
Q ss_pred EEEEEccccccc-CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHH--
Q 042731 268 VLYVSFGSQNTI-AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQV-- 344 (481)
Q Consensus 268 ~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~-- 344 (481)
.+++..|..... ..+.+.+.+..+...+.+++++..+.. . ....+.......+.++.+....+..
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~------~------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK------K------FEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH------H------HHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc------h------HHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 355666777532 244444444444445666655543221 0 1122222222225677777777764
Q ss_pred -HhhcccCccceeecc---Cc-hhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccC-C----cccCHHHHH
Q 042731 345 -EILSHRSVSAFLSHC---GW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGM-S----CEVLKEDLS 414 (481)
Q Consensus 345 -~ll~~~~v~~~I~HG---G~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~-~----~~~~~~~l~ 414 (481)
.+++.+++ ||.-. |. .+++||+++|+|+|+.... -....|.+. .-|....... + ...+++.|+
T Consensus 396 ~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHH
Confidence 46777776 66532 33 4889999999999997543 223333322 2343322100 0 113568899
Q ss_pred HHHHHHhc
Q 042731 415 AKIELVMN 422 (481)
Q Consensus 415 ~~i~~vl~ 422 (481)
++|++++.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=91.01 E-value=9.9 Score=35.34 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=74.7
Q ss_pred CeEEEEEccccc---ccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecc--
Q 042731 266 TSVLYVSFGSQN---TIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKW-- 340 (481)
Q Consensus 266 ~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~-- 340 (481)
++.|.+.-|+.. ..+.+.+.++++.+...+.++++..+... + ....+++...-.++.+.+-
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e--------~~~~~~i~~~~~~~~l~g~~s 243 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------E--------EERAKRLAEGFAYVEVLPKMS 243 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------H--------HHHHHHHHTTCTTEEECCCCC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------H--------HHHHHHHHhhCCcccccCCCC
Confidence 557777777764 25678888888888776777665544321 0 1111111100123323222
Q ss_pred cCH-HHhhcccCccceeec-cCchhHHHHHHhCCcEEec--ccccchhhhHHHHHHHhcce-EEeec--cCCcccCHHHH
Q 042731 341 APQ-VEILSHRSVSAFLSH-CGWNSVLEALSHGVPIIGW--PLAAEQFYNSKLLEEEMGVC-VEIAR--GMSCEVLKEDL 413 (481)
Q Consensus 341 ip~-~~ll~~~~v~~~I~H-GG~gt~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~lG~G-~~~~~--~~~~~~~~~~l 413 (481)
+.+ ..++.++++ +|+. .|...+ |.+.|+|+|++ |..... ++ -+|-. ..+.. .--..++++++
T Consensus 244 l~el~ali~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~--~~-----P~~~~~~~~~~~~~cm~~I~~~~V 312 (326)
T 2gt1_A 244 LEGVARVLAGAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPGL--IG-----GYGKNQMVCRAPGNELSQLTANAV 312 (326)
T ss_dssp HHHHHHHHHTCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHHH--HC-----CCSSSEEEEECGGGCGGGCCHHHH
T ss_pred HHHHHHHHHhCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChhh--cC-----CCCCCceEecCCcccccCCCHHHH
Confidence 222 568888775 9998 554444 66699999988 432211 00 00111 11110 01247899999
Q ss_pred HHHHHHHhcCC
Q 042731 414 SAKIELVMNET 424 (481)
Q Consensus 414 ~~~i~~vl~~~ 424 (481)
.+++.++|++-
T Consensus 313 ~~~i~~~l~~~ 323 (326)
T 2gt1_A 313 KQFIEENAEKA 323 (326)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHHHHh
Confidence 99999999764
No 58
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=81.04 E-value=15 Score=34.31 Aligned_cols=191 Identities=10% Similarity=0.016 Sum_probs=72.8
Q ss_pred CeEEEEEcccccccCH-HHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHH
Q 042731 266 TSVLYVSFGSQNTIAA-SQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQV 344 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~ 344 (481)
+++++++ |......+ ++..++++-+++.+.+-|+.++.-. ...|.. + +..+.... ...
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~-----------~~~pht-----r--p~~V~~~a--t~~ 160 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAP-----------MTVPHT-----R--PTVVTAHG--NST 160 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEE-----------ESCCTT-----S--CCCEEEEE--SSG
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCcc-----------CCCCCC-----C--CCCeEEEe--CCH
Confidence 4566655 65555555 5556688888899998888765421 001110 0 22222211 111
Q ss_pred HhhcccC--ccceeeccCchhHH--HHHHhCCcEEeccc----cc---chhhhHHHHHHHhc--ceEEeeccCCcccCHH
Q 042731 345 EILSHRS--VSAFLSHCGWNSVL--EALSHGVPIIGWPL----AA---EQFYNSKLLEEEMG--VCVEIARGMSCEVLKE 411 (481)
Q Consensus 345 ~ll~~~~--v~~~I~HGG~gt~~--eal~~GvP~l~~P~----~~---DQ~~na~~v~~~lG--~G~~~~~~~~~~~~~~ 411 (481)
.+...-. ..-..-.||..+++ ++...|.|.+++=- +. +.|.-|..+-+.+. .|+.++.++ -.-.++
T Consensus 161 ~l~~~~~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~-L~e~A~ 239 (319)
T 2p90_A 161 DRLKDQVSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLA-LERDAE 239 (319)
T ss_dssp GGCSSCCCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHH-HHHHHH
T ss_pred HHHhhhhccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHH-HHHHHH
Confidence 2211100 00122235665544 56789999987632 22 33444443322221 244444300 233357
Q ss_pred HHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcc------cCCCC--chHHHHHHHHHHHHhhhhhcccCCc
Q 042731 412 DLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNE------TNFKG--SSVKAMDQFLNAALIMRQMEKGASK 478 (481)
Q Consensus 412 ~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~g--s~~~~~~~~~~~~~~~~~~~~~~~~ 478 (481)
.+...|.++.+...+-..|-+...+=.+...++-+.. +...+ |.....++|.++|++.......+++
T Consensus 240 ~~e~~i~~l~~~~~e~~~~V~~LE~~~D~~~~~~~~~~~~~~~~~~~~~ps~d~i~~efE~fL~~~~~~~~~~~~ 314 (319)
T 2p90_A 240 KVHRQLMEQTEESSEIQRVVGALEQQYDSELERYRNRHPQAVMPGESELPSGDEIGAEFEKFLADLDDQGGSDHK 314 (319)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC----------------------------------------
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhcccccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCccc
Confidence 7788888888644222223223333233322110000 01111 2466678999999887654444444
No 59
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=80.20 E-value=25 Score=29.49 Aligned_cols=77 Identities=12% Similarity=0.033 Sum_probs=43.2
Q ss_pred EEecccCHH-Hhh-cccCccceeeccCchhHH---HHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCH
Q 042731 336 VVHKWAPQV-EIL-SHRSVSAFLSHCGWNSVL---EALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLK 410 (481)
Q Consensus 336 ~v~~~ip~~-~ll-~~~~v~~~I~HGG~gt~~---eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~ 410 (481)
++.++.+.. .++ ..++ ..++--||.||+. |++.+++|++++|.+. .....+....--.+.+ .-++
T Consensus 92 i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~------~~~~ 161 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHV------AADV 161 (176)
T ss_dssp EECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEE------ESSH
T ss_pred EEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEE------cCCH
Confidence 444555542 233 3444 3677788999866 5577999999999843 1111222120112222 2367
Q ss_pred HHHHHHHHHHhc
Q 042731 411 EDLSAKIELVMN 422 (481)
Q Consensus 411 ~~l~~~i~~vl~ 422 (481)
+++.+.+.+.+.
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776654
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=78.97 E-value=2.8 Score=37.73 Aligned_cols=26 Identities=23% Similarity=0.195 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhh
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKK 35 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~ 35 (481)
-+.+|++.|++ .| +|+++.+...+..
T Consensus 16 Gi~~L~~~l~~-~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 16 GINALREALKS-LG-RVVVVAPDRNLSG 41 (251)
T ss_dssp HHHHHHHHHTT-TS-EEEEEEESSCCTT
T ss_pred HHHHHHHHHHh-CC-CEEEEeeCCCCcc
Confidence 35678899999 88 5998887655533
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.00 E-value=6.3 Score=40.89 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=26.6
Q ss_pred HHhhcccCccceeecc---Cc-hhHHHHHHhCCcEEeccccc
Q 042731 344 VEILSHRSVSAFLSHC---GW-NSVLEALSHGVPIIGWPLAA 381 (481)
Q Consensus 344 ~~ll~~~~v~~~I~HG---G~-gt~~eal~~GvP~l~~P~~~ 381 (481)
.+++..+++ ||.-. |+ .+.+||+++|+|+|+.-..+
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 457877776 66543 44 48899999999999976543
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=74.24 E-value=5.7 Score=35.57 Aligned_cols=27 Identities=22% Similarity=0.210 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhhh
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKKL 36 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i 36 (481)
-+.+|++.|++ .| +|+++.+...+...
T Consensus 16 Gi~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 16 GINALREALKS-LG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp HHHHHHHHHTT-TS-EEEEEEESSCCTTS
T ss_pred HHHHHHHHHHh-cC-CEEEEecCCCccCC
Confidence 46788999999 88 99999987655433
No 63
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=74.10 E-value=11 Score=37.11 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEe
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFI 132 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~ 132 (481)
.+.+++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 366 ~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 356788888 9999999855 7789999999999643
No 64
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=72.87 E-value=14 Score=33.31 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHhhccCCCCccEEEeCCCCc------hHHHHHHHhCCceEEEec
Q 042731 85 LEPHFKKLISELVNEQNGQKPLCIITDTFLG------WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 85 ~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 133 (481)
....+.+++++. +||+||+...+. .+..+|..||+|++...+
T Consensus 100 ~a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 100 VGRILTEVIKKE-------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 345567788888 899999886542 678999999999998764
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=68.11 E-value=25 Score=34.88 Aligned_cols=107 Identities=11% Similarity=0.088 Sum_probs=66.3
Q ss_pred EecccCHH---HhhcccCccceee---ccCch-hHHHHHHhCC-----cEEecccccchhhhHHHHHHHhcceEEeeccC
Q 042731 337 VHKWAPQV---EILSHRSVSAFLS---HCGWN-SVLEALSHGV-----PIIGWPLAAEQFYNSKLLEEEMGVCVEIARGM 404 (481)
Q Consensus 337 v~~~ip~~---~ll~~~~v~~~I~---HGG~g-t~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~ 404 (481)
+.+++++. .++..+++ ||. .=|+| ++.||+++|+ |+|+--..+--.. + .-|+.+++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEECC--
Confidence 45778875 46777776 554 34665 7889999998 6766544332111 1 23566665
Q ss_pred CcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhh
Q 042731 405 SCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIM 469 (481)
Q Consensus 405 ~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 469 (481)
.+.+.++++|.++|+++.+ ..+++.++..+.++ + -+....++++++.+.+.
T Consensus 404 ---~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~-------~--~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 ---YDRDEVAAALDRALTMSLA--ERISRHAEMLDVIV-------K--NDINHWQECFISDLKQI 454 (482)
T ss_dssp ---TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHH-------H--TCHHHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-------h--CCHHHHHHHHHHHHHhc
Confidence 4689999999999987521 12233333333333 1 23567778888887765
No 66
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.95 E-value=12 Score=32.94 Aligned_cols=151 Identities=16% Similarity=0.101 Sum_probs=78.1
Q ss_pred hcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEec
Q 042731 260 LDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHK 339 (481)
Q Consensus 260 l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~ 339 (481)
++-. .++++.|..|.+. ...+..|...|..+.++... +.+++..-.. ..++....
T Consensus 27 l~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------------~~~~l~~l~~--~~~i~~i~ 81 (223)
T 3dfz_A 27 LDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------------VSAEINEWEA--KGQLRVKR 81 (223)
T ss_dssp ECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------------CCHHHHHHHH--TTSCEEEC
T ss_pred EEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------------CCHHHHHHHH--cCCcEEEE
Confidence 4433 3558888777665 44566677778887776532 2233333222 23333322
Q ss_pred ccCHHHhhcccCccceeeccCchhHHHHHH----hCCcEEecccccchhhhHH-----HHHHHhcceEEeeccCCcccCH
Q 042731 340 WAPQVEILSHRSVSAFLSHCGWNSVLEALS----HGVPIIGWPLAAEQFYNSK-----LLEEEMGVCVEIARGMSCEVLK 410 (481)
Q Consensus 340 ~ip~~~ll~~~~v~~~I~HGG~gt~~eal~----~GvP~l~~P~~~DQ~~na~-----~v~~~lG~G~~~~~~~~~~~~~ 410 (481)
..-....|..++ .+|.--|.-.+.+.++ .|+|+-++ |.|..+. .+.+- ++-+.+..+...-.-+
T Consensus 82 ~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la 154 (223)
T 3dfz_A 82 KKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLT 154 (223)
T ss_dssp SCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHH
T ss_pred CCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHH
Confidence 222233455544 4888777665555544 45564433 4433332 22222 4444455421111234
Q ss_pred HHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 042731 411 EDLSAKIELVMNETEKGTDLRNKANEVKVIIKNA 444 (481)
Q Consensus 411 ~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~ 444 (481)
..|++.|...+-. ....+-+.+.++++.+++.
T Consensus 155 ~~iR~~ie~~lp~--~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 155 KRIKEDLSSNYDE--SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHSCT--HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccH--HHHHHHHHHHHHHHHHHHH
Confidence 5677777777643 3446888888888888865
No 67
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=65.47 E-value=20 Score=32.10 Aligned_cols=42 Identities=14% Similarity=-0.016 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHhhccCCCCccEEEeCCCCc------hHHHHHHHhCCceEEEec
Q 042731 85 LEPHFKKLISELVNEQNGQKPLCIITDTFLG------WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 85 ~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 133 (481)
....+.+++++. +||+||+...+. .+..+|..||+|++...+
T Consensus 101 ~a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 101 VAKILAAVARAE-------GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 344556677777 899999886442 678999999999998664
No 68
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=59.05 E-value=16 Score=32.06 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=47.3
Q ss_pred ccceeeccCchhHHHHHHhCCcEEeccccc-----------------------chhhhHHHHHHHhcceEEeeccCCccc
Q 042731 352 VSAFLSHCGWNSVLEALSHGVPIIGWPLAA-----------------------EQFYNSKLLEEEMGVCVEIARGMSCEV 408 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~GvP~l~~P~~~-----------------------DQ~~na~~v~~~lG~G~~~~~~~~~~~ 408 (481)
++.+|+.||........ .++|+|-++..+ .....+..+.+.||+-+.... --
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~----~~ 138 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRS----YI 138 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEE----ES
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEE----eC
Confidence 44599999998888864 589999999832 234445666666676666554 44
Q ss_pred CHHHHHHHHHHHhcC
Q 042731 409 LKEDLSAKIELVMNE 423 (481)
Q Consensus 409 ~~~~l~~~i~~vl~~ 423 (481)
+++++...|.++..+
T Consensus 139 ~~ee~~~~i~~l~~~ 153 (225)
T 2pju_A 139 TEEDARGQINELKAN 153 (225)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC
Confidence 677778888777654
No 69
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.65 E-value=12 Score=32.06 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=46.2
Q ss_pred cCccceeeccCchhHHHHHHhCCcEEeccccc-----------------------chhhhHHHHHHHhcceEEeeccCCc
Q 042731 350 RSVSAFLSHCGWNSVLEALSHGVPIIGWPLAA-----------------------EQFYNSKLLEEEMGVCVEIARGMSC 406 (481)
Q Consensus 350 ~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~-----------------------DQ~~na~~v~~~lG~G~~~~~~~~~ 406 (481)
..++.+|+.||........ .++|+|-++..+ .....+..+.+.||+-+....
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~---- 124 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFL---- 124 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEE----
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEE----
Confidence 3455699999998888864 589999999842 234455566666666655543
Q ss_pred ccCHHHHHHHHHHHhcC
Q 042731 407 EVLKEDLSAKIELVMNE 423 (481)
Q Consensus 407 ~~~~~~l~~~i~~vl~~ 423 (481)
--+++++...|.++..+
T Consensus 125 ~~~~~e~~~~i~~l~~~ 141 (196)
T 2q5c_A 125 FSSEDEITTLISKVKTE 141 (196)
T ss_dssp ECSGGGHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHC
Confidence 34566667777766653
No 70
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=56.48 E-value=82 Score=25.80 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=74.5
Q ss_pred eEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHh
Q 042731 267 SVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEI 346 (481)
Q Consensus 267 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~l 346 (481)
+.|-|-+||.. +.....+....++..|..+-+-+.+-+ ..|+.+.+..+ ..+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH------------R~p~~~~~~~~-------------~a~- 54 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH------------KTAEHVVSMLK-------------EYE- 54 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT------------TCHHHHHHHHH-------------HHH-
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc------------CCHHHHHHHHH-------------Hhh-
Confidence 34666677765 677788888888888887655443332 14544433221 111
Q ss_pred hcccCccceeeccCch----hHHHHHHhCCcEEecccccchh--hhHHHHHH--HhcceEEeeccCCcccCHHHHHHHHH
Q 042731 347 LSHRSVSAFLSHCGWN----SVLEALSHGVPIIGWPLAAEQF--YNSKLLEE--EMGVCVEIARGMSCEVLKEDLSAKIE 418 (481)
Q Consensus 347 l~~~~v~~~I~HGG~g----t~~eal~~GvP~l~~P~~~DQ~--~na~~v~~--~lG~G~~~~~~~~~~~~~~~l~~~i~ 418 (481)
..-..+.||.=+|.. ++.-+ ..-+|+|.+|...-.. ..-.-+.+ . |+.+.--. ...++..++-.|.
T Consensus 55 -~~~~~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dLlS~vqmp~-GvpVatv~---~~~nAa~lA~~Il 128 (159)
T 3rg8_A 55 -ALDRPKLYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGADIYSSLRMPS-GISPALVL---EPKNAALLAARIF 128 (159)
T ss_dssp -TSCSCEEEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTHHHHHHCCCT-TCCCEECC---SHHHHHHHHHHHH
T ss_pred -hcCCCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCccHHHHHhCCC-CCceEEec---CchHHHHHHHHHH
Confidence 000123366666642 33333 3568999999653111 11111111 2 44433222 4556666666664
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHH
Q 042731 419 LVMNETEKGTDLRNKANEVKVIIKNA 444 (481)
Q Consensus 419 ~vl~~~~~~~~~~~~a~~~~~~~~~~ 444 (481)
.+ +|+ .++++.+.+++...+.
T Consensus 129 ~~-~d~----~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 129 SL-YDK----EIADSVKSYMESNAQK 149 (159)
T ss_dssp TT-TCH----HHHHHHHHHHHHHHHH
T ss_pred hC-CCH----HHHHHHHHHHHHHHHH
Confidence 33 566 7888888888877654
No 71
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=56.42 E-value=13 Score=33.10 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhhh
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKKL 36 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i 36 (481)
-+.+|++.|++ .| +|+++.+...+...
T Consensus 15 Gi~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 15 GIIVLAELLSE-EH-EVFVVAPDKERSAT 41 (247)
T ss_dssp HHHHHHHHHTT-TS-EEEEEEESSCCTTC
T ss_pred hHHHHHHHHHh-CC-CEEEEecCCCCcCC
Confidence 36788999999 88 89999987665443
No 72
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=54.80 E-value=91 Score=25.85 Aligned_cols=144 Identities=20% Similarity=0.212 Sum_probs=78.4
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVE 345 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ 345 (481)
.|.|-|-+||.. +.....+....++..|..+-+-+.+-+ ..|+.+.+..+ ..+
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saH------------R~p~~l~~~~~-------------~a~ 64 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAH------------RMPDEMFDYAE-------------KAR 64 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHHHH-------------HHT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEccc------------cCHHHHHHHHH-------------HHH
Confidence 556888888875 677788889999998887655443332 14544433222 000
Q ss_pred hhcccCccceeeccC-ch---hHHHHHHhCCcEEecccccch--hhhHH-HHHHHh-cceEEee-ccCCcccCHHHHHHH
Q 042731 346 ILSHRSVSAFLSHCG-WN---SVLEALSHGVPIIGWPLAAEQ--FYNSK-LLEEEM-GVCVEIA-RGMSCEVLKEDLSAK 416 (481)
Q Consensus 346 ll~~~~v~~~I~HGG-~g---t~~eal~~GvP~l~~P~~~DQ--~~na~-~v~~~l-G~G~~~~-~~~~~~~~~~~l~~~ 416 (481)
.-.++.+|.=.| .+ ++. |-..-+|+|.+|....- ...+- -+.+.. |+.+-.- .+.+...++..++-.
T Consensus 65 ---~~g~~ViIa~AG~aahLpgvv-A~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ 140 (173)
T 4grd_A 65 ---ERGLRAIIAGAGGAAHLPGML-AAKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVS 140 (173)
T ss_dssp ---TTTCSEEEEEEESSCCHHHHH-HHHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHH
T ss_pred ---hcCCeEEEEeccccccchhhh-eecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHH
Confidence 011222554444 33 333 33558999999975432 22211 112121 4433221 111223455566665
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 417 IELVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
|. -++|+ .++++.++++++.++.+
T Consensus 141 IL-a~~d~----~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 141 IL-SGNSV----DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HH-TTSCH----HHHHHHHHHHHHHHHHH
T ss_pred HH-cCCCH----HHHHHHHHHHHHHHHHH
Confidence 53 33566 79999999988887654
No 73
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=52.74 E-value=1.8e+02 Score=28.73 Aligned_cols=113 Identities=9% Similarity=0.013 Sum_probs=71.5
Q ss_pred cEEEecccCHH---HhhcccCccceee--ccCchh-HHHHHHhC---CcEEecccccchhhhHHHHHHHhcceEEeeccC
Q 042731 334 GLVVHKWAPQV---EILSHRSVSAFLS--HCGWNS-VLEALSHG---VPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGM 404 (481)
Q Consensus 334 ~~~v~~~ip~~---~ll~~~~v~~~I~--HGG~gt-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~ 404 (481)
.++....+|+. .++..+++ ++++ .=|+|. ..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC--
Confidence 46666778874 56667777 3333 468875 57999996 6666553332 122121 24788876
Q ss_pred CcccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhhh
Q 042731 405 SCEVLKEDLSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALIMR 470 (481)
Q Consensus 405 ~~~~~~~~l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 470 (481)
.+.+.++++|.++|+++.+ .-+++.+++.+.++ .. +...-++.|++.|....
T Consensus 423 ---~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~--------~~-d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR--------PW-TLEAWVQAQLDGLAADH 474 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT--------TC-BHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH--------HC-CHHHHHHHHHHHHhhcc
Confidence 4789999999999998721 33444444444443 23 35677888888887654
No 74
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=52.51 E-value=65 Score=24.91 Aligned_cols=38 Identities=16% Similarity=0.102 Sum_probs=26.1
Q ss_pred CCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEE
Q 042731 265 YTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVV 302 (481)
Q Consensus 265 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 302 (481)
++.+|+|+.||......+.+..+...++.....+.+.+
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 35699999999854334567778888776555555554
No 75
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=52.13 E-value=32 Score=31.28 Aligned_cols=27 Identities=7% Similarity=-0.119 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhhh
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKKL 36 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i 36 (481)
-+.+|++.|++ .| +|+++.+...+...
T Consensus 15 Gi~aL~~aL~~-~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 15 GLRLLYQFALS-LG-DVDVVAPESPKSAT 41 (280)
T ss_dssp HHHHHHHHHGG-GS-EEEEEEESSCTTTS
T ss_pred hHHHHHHHHHh-CC-CEEEEecCCCCcCC
Confidence 36788999999 88 99999987665443
No 76
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=51.83 E-value=79 Score=31.63 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHh-------CCceEEEe
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEY-------GIFHAIFI 132 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~l-------giP~v~~~ 132 (481)
.+.++++.. +||++|+... +..+|+++ |||++.+.
T Consensus 429 ~l~~~i~~~-------~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 429 HLRSLVFTD-------KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHHHT-------CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 446677777 9999999965 56677777 99998643
No 77
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=50.45 E-value=41 Score=29.28 Aligned_cols=41 Identities=7% Similarity=-0.086 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHhhccCCCCccEEEeCCCCc---hHHHHHHHhCCceEEEe
Q 042731 85 LEPHFKKLISELVNEQNGQKPLCIITDTFLG---WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 85 ~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~---~~~~~A~~lgiP~v~~~ 132 (481)
..+.+.+++++. +||+||+..... .+..+|.+||+|++.-.
T Consensus 79 ~a~~l~~~i~~~-------~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 79 HTSILVNLFKEE-------QPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred HHHHHHHHHHhc-------CCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 445667788888 999999886433 45689999999988633
No 78
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=49.51 E-value=77 Score=31.72 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEe
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFI 132 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~ 132 (481)
.+.+++++. +||++|.+. ....+|+++|||++.+.
T Consensus 340 el~~~i~~~-------~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 340 EVEKAIEAA-------APELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHhhc-------CCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 456788888 999999984 47889999999999743
No 79
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=49.51 E-value=23 Score=28.56 Aligned_cols=86 Identities=16% Similarity=0.124 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhhh
Q 042731 7 IPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASASLE 86 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (481)
.-++.+|+.|.+ .|+++. ++....+.+++ .|+....+... .++- . ....
T Consensus 37 ~~l~~~a~~l~~-lGf~i~--AT~GTa~~L~~-----~Gi~v~~v~k~------~egg---~--------------~~~~ 85 (143)
T 2yvq_A 37 PRFLGVAEQLHN-EGFKLF--ATEATSDWLNA-----NNVPATPVAWP------SQEG---Q--------------NPSL 85 (143)
T ss_dssp HHHHHHHHHHHT-TTCEEE--EEHHHHHHHHH-----TTCCCEEECCG------GGC----------------------C
T ss_pred HHHHHHHHHHHH-CCCEEE--ECchHHHHHHH-----cCCeEEEEEec------cCCC---c--------------cccc
Confidence 347889999999 899743 33445567777 45555544421 1100 0 0011
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCC--------chHHHHHHHhCCceEE
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFL--------GWCKETAQEYGIFHAI 130 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~--------~~~~~~A~~lgiP~v~ 130 (481)
+.+.++|+.- +.|+||..+-- ......|-.+|||++.
T Consensus 86 ~~i~d~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 86 SSIRKLIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp BCHHHHHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ccHHHHHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 3456677776 89999987533 1345678889999986
No 80
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=47.76 E-value=1.2e+02 Score=25.11 Aligned_cols=144 Identities=20% Similarity=0.193 Sum_probs=79.6
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVE 345 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ 345 (481)
+|.|-|-+||.. +.....+....|+..|..+-+-+.+-+ ..|+.+.+..+...
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH------------R~p~~l~~~~~~a~------------- 63 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH------------RTPDYMFEYAETAR------------- 63 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHHHHHTT-------------
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc------------CCHHHHHHHHHHHH-------------
Confidence 456777788875 677788888899998887655443331 14544433221000
Q ss_pred hhcccCccceeeccCc-hhHHH--HHHhCCcEEecccccc--hhhhHHH-HHH--HhcceEE-eeccCCcccCHHHHHHH
Q 042731 346 ILSHRSVSAFLSHCGW-NSVLE--ALSHGVPIIGWPLAAE--QFYNSKL-LEE--EMGVCVE-IARGMSCEVLKEDLSAK 416 (481)
Q Consensus 346 ll~~~~v~~~I~HGG~-gt~~e--al~~GvP~l~~P~~~D--Q~~na~~-v~~--~lG~G~~-~~~~~~~~~~~~~l~~~ 416 (481)
...++.+|.=+|. +-+-- |-..-+|+|.+|.... ....+-. +.+ . |+.+. +..++....++..++..
T Consensus 64 ---~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaq 139 (170)
T 1xmp_A 64 ---ERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQ 139 (170)
T ss_dssp ---TTTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHH
T ss_pred ---hCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHH
Confidence 0012235555553 32221 2234689999998642 2222221 222 2 55431 22211123566777766
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 417 IELVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
|. -++|+ .++++.+.+++..++.+
T Consensus 140 Il-a~~d~----~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 140 IL-GSFHD----DIHDALELRREAIEKDV 163 (170)
T ss_dssp HH-HTTCH----HHHHHHHHHHHHHHHHH
T ss_pred HH-ccCCH----HHHHHHHHHHHHHHHHH
Confidence 65 44666 79999999998887665
No 81
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=45.90 E-value=1.3e+02 Score=25.00 Aligned_cols=140 Identities=16% Similarity=0.136 Sum_probs=77.5
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVE 345 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ 345 (481)
++.|-|-+||.. +.....+....++..|..+-+-+.+-+ ..|+.+.+..+ ..+
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH------------R~p~~~~~~~~-------------~a~ 59 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH------------RTPEAMFSYAR-------------GAA 59 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TCHHHHHHHHH-------------HHH
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC------------CCHHHHHHHHH-------------HHH
Confidence 345677777765 677788888899998887655443332 14444433211 110
Q ss_pred hhcccCccceeeccCc-h---hHHHHHHhCCcEEecccccc--hhhhHHH-HHH--Hhcc--eEEeeccCCcccCHHHHH
Q 042731 346 ILSHRSVSAFLSHCGW-N---SVLEALSHGVPIIGWPLAAE--QFYNSKL-LEE--EMGV--CVEIARGMSCEVLKEDLS 414 (481)
Q Consensus 346 ll~~~~v~~~I~HGG~-g---t~~eal~~GvP~l~~P~~~D--Q~~na~~-v~~--~lG~--G~~~~~~~~~~~~~~~l~ 414 (481)
-.. ++.||.=+|. + ++.-+ ..-+|+|.+|...- ....+-. +.+ . |+ +..... ...++..++
T Consensus 60 -~~g--~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~-GvpVatV~I~---~~~nAa~lA 131 (174)
T 3lp6_A 60 -ARG--LEVIIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPA-GVPVATVSIG---GAGNAGLLA 131 (174)
T ss_dssp -HHT--CCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCT-TCCCEECCTT---CHHHHHHHH
T ss_pred -hCC--CCEEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCC-CCeeEEEEcC---cchHHHHHH
Confidence 011 2236666553 2 33333 36789999998632 1222211 111 2 43 322221 345666776
Q ss_pred HHHHHHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 415 AKIELVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 415 ~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
-.|..+ +|+ .++++.+.+++..++.+
T Consensus 132 a~Il~~-~d~----~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 132 VRMLGA-ANP----QLRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHT-TCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-CCH----HHHHHHHHHHHHHHHHH
Confidence 666443 566 79999999998887653
No 82
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=45.09 E-value=1.3e+02 Score=24.78 Aligned_cols=144 Identities=17% Similarity=0.180 Sum_probs=78.0
Q ss_pred eEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHh
Q 042731 267 SVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEI 346 (481)
Q Consensus 267 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~l 346 (481)
|.|-|-+||.. +.....+....|+..|..+-+-+.+-+ ..|+.+.+..+ .
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH------------Rtp~~l~~~~~-------------~--- 55 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAH------------RTPDKMFDYAE-------------T--- 55 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT------------TCHHHHHHHHH-------------H---
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCc------------CCHHHHHHHHH-------------H---
Confidence 45777777775 677788888889988887655443332 14554433222 1
Q ss_pred hcccCccceeeccCc-hhHHH--HHHhCCcEEecccccch--hhhHHH-HHHH-hcceEEee-ccCCcccCHHHHHHHHH
Q 042731 347 LSHRSVSAFLSHCGW-NSVLE--ALSHGVPIIGWPLAAEQ--FYNSKL-LEEE-MGVCVEIA-RGMSCEVLKEDLSAKIE 418 (481)
Q Consensus 347 l~~~~v~~~I~HGG~-gt~~e--al~~GvP~l~~P~~~DQ--~~na~~-v~~~-lG~G~~~~-~~~~~~~~~~~l~~~i~ 418 (481)
+....++.||.=+|. +-+-- |-..-+|+|.+|...-. ...+-. +.+. -|+++..- .++....++..++-.|.
T Consensus 56 ~~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il 135 (166)
T 3oow_A 56 AKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASIL 135 (166)
T ss_dssp TTTTTCCEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHH
T ss_pred HHhCCCcEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH
Confidence 111112337766664 32222 22346899999985421 111111 1111 04444332 21111345666666664
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 419 LVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 419 ~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
.+ +|+ .++++.+.+++.+++.+
T Consensus 136 ~~-~d~----~l~~kl~~~r~~~~~~v 157 (166)
T 3oow_A 136 QH-TDI----NIAKALAEFRAEQTRFV 157 (166)
T ss_dssp GG-GCH----HHHHHHHHHHHHHHHHH
T ss_pred cC-CCH----HHHHHHHHHHHHHHHHH
Confidence 43 666 79999999999888665
No 83
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=44.16 E-value=27 Score=29.85 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=66.5
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCC-----CCC-CCCC----CCCCC
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLP-----PCT-ENTD----SIPYH 73 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~-~~~~----~~~~~ 73 (481)
|.+.=.+.+|+.+ + .|.+|.+.-+ .....+++. ..+.++.++.. ..|-+. ... .... .....
T Consensus 36 ~~l~~~v~~a~~~-~-~~~dVIISRG-gta~~lr~~----~~iPVV~I~~s-~~Dil~al~~a~~~~~kIavvg~~~~~~ 107 (196)
T 2q5c_A 36 ASLTRASKIAFGL-Q-DEVDAIISRG-ATSDYIKKS----VSIPSISIKVT-RFDTMRAVYNAKRFGNELALIAYKHSIV 107 (196)
T ss_dssp CCHHHHHHHHHHH-T-TTCSEEEEEH-HHHHHHHTT----CSSCEEEECCC-HHHHHHHHHHHGGGCSEEEEEEESSCSS
T ss_pred CCHHHHHHHHHHh-c-CCCeEEEECC-hHHHHHHHh----CCCCEEEEcCC-HhHHHHHHHHHHhhCCcEEEEeCcchhh
Confidence 4566678889999 8 8999776664 344455553 23556655532 111100 000 0000 00111
Q ss_pred chHHHHHHHh--------hhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEechhHH
Q 042731 74 LFPKFLQASA--------SLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIGGGGF 137 (481)
Q Consensus 74 ~~~~~~~~~~--------~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 137 (481)
....+...+. .....+.+.++++... +.|+||++.. +..+|+++|+|.+.+.+..-+
T Consensus 108 ~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~----G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 108 DKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTE----NIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp CHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHT----TCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC----CCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 2233333331 0123456666666555 8999999854 789999999999998874433
No 84
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=43.11 E-value=18 Score=32.49 Aligned_cols=53 Identities=17% Similarity=0.252 Sum_probs=37.9
Q ss_pred ccceeeccCchhHHHHHHh---CCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhcCC
Q 042731 352 VSAFLSHCGWNSVLEALSH---GVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMNET 424 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~~~ 424 (481)
.+++|+=||=||+.+++.. ++|+++++.. . +|.. ..+.++++.+++..++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~--~Gfl------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAG------------R--LGFL------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESS------------S--CCSS------CCBCGGGHHHHHHHHHTTC
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECC------------C--CCcc------CcCCHHHHHHHHHHHHcCC
Confidence 4569999999999999887 8899998632 1 1111 1245777888888887765
No 85
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=42.79 E-value=65 Score=28.26 Aligned_cols=42 Identities=12% Similarity=-0.054 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCCc--hHHHHHHH----hCCceEEEechh
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFLG--WCKETAQE----YGIFHAIFIGGG 135 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 135 (481)
+.+.++.++| +||++|+-.-.+ ++...|++ .|||+|++.-.|
T Consensus 54 ~~~~~~~~~~-------~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 54 EMALDIAEDF-------EPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp HHHHHHHHHH-------CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred HHhhhhhhhc-------CCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 3334555899 999888764443 66666666 499999988755
No 86
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=42.70 E-value=42 Score=30.03 Aligned_cols=42 Identities=14% Similarity=-0.044 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHhhccCCCCccEEEeCCCCc------hHHHHHHHhCCceEEEec
Q 042731 85 LEPHFKKLISELVNEQNGQKPLCIITDTFLG------WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 85 ~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 133 (481)
....+.+++++. +||+||+...+. .+..+|..||+|++...+
T Consensus 104 ~A~~La~~i~~~-------~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 104 VARVLAKLAEKE-------KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhc-------CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 344556777777 899999886442 678999999999998664
No 87
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=42.61 E-value=28 Score=32.69 Aligned_cols=31 Identities=16% Similarity=0.322 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCcchhhhhh
Q 042731 7 IPFLALARRLEETNKYTITLVNTPLNLKKLKS 38 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~ 38 (481)
.-+.+|++.|.+ +|++|.+++++...+.+++
T Consensus 204 ~~~~~l~~~l~~-~g~~vvl~g~~~e~~~~~~ 234 (349)
T 3tov_A 204 ERFAHVADYFGR-LGYKTVFFGGPMDLEMVQP 234 (349)
T ss_dssp HHHHHHHHHHHH-HTCEEEECCCTTTHHHHHH
T ss_pred HHHHHHHHHHHh-CCCeEEEEeCcchHHHHHH
Confidence 357889999999 8999998877766554443
No 88
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=41.58 E-value=37 Score=31.73 Aligned_cols=73 Identities=14% Similarity=0.063 Sum_probs=49.5
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeec
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSH 358 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~H 358 (481)
.+.+....+.+++.....+.||.+.++. .-..+.++++...+-.+|.. ||-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~--------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 113 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY--------------------------NSNGLLKYLDYDLIRENPKF--FCGY 113 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS--------------------------CGGGGGGGCCHHHHHTSCCE--EEEC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc--------------------------cHHHHHhhcChhHHHhCCeE--EEEe
Confidence 3467788899999999999999988763 11123355666665556665 7777
Q ss_pred cCchhHHHHHH--hCCcEEeccc
Q 042731 359 CGWNSVLEALS--HGVPIIGWPL 379 (481)
Q Consensus 359 GG~gt~~eal~--~GvP~l~~P~ 379 (481)
.-...+.-+++ .|+..+--|.
T Consensus 114 SDiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 114 SDITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp GGGHHHHHHHHHHHCBCEEECCC
T ss_pred cchHHHHHHHHHhhCCcEEEccc
Confidence 77666666665 4777766665
No 89
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=41.36 E-value=20 Score=35.72 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEE
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIF 131 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 131 (481)
..+.+++++. +||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~~-------~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKRI-------KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHhc-------CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 3556788888 999999974 4689999999999963
No 90
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=40.90 E-value=1.6e+02 Score=27.47 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=14.0
Q ss_pred cccCHHHHHHHHHHHhc
Q 042731 406 CEVLKEDLSAKIELVMN 422 (481)
Q Consensus 406 ~~~~~~~l~~~i~~vl~ 422 (481)
..++++.|.++|+++++
T Consensus 324 ~g~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 324 SIPQVKDIIFAIKKTLN 340 (341)
T ss_dssp TSCCHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHhc
Confidence 45789999999988874
No 91
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=40.70 E-value=92 Score=28.23 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=50.7
Q ss_pred CCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhhhHHHHHHHHHHhhc
Q 042731 20 NKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASASLEPHFKKLISELVNE 99 (481)
Q Consensus 20 ~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 99 (481)
...+..+++++.+.-+... .|++...+. +..++.+ +. ......+.+++++.
T Consensus 177 ~~~~~~v~~H~af~Yf~~~-----yGl~~~~~~------~~~~~~e-----ps----------~~~l~~l~~~ik~~--- 227 (286)
T 3gi1_A 177 VRSKTFVTQHTAFSYLAKR-----FGLKQLGIS------GISPEQE-----PS----------PRQLKEIQDFVKEY--- 227 (286)
T ss_dssp CSCCEEEEEESCCHHHHHH-----TTCEEEEEE------CSCC--------CC----------HHHHHHHHHHHHHT---
T ss_pred CCCCEEEEECCchHHHHHH-----CCCeEeecc------ccCCCCC-----CC----------HHHHHHHHHHHHHc---
Confidence 3445556677888877888 677776544 1111100 10 12334455666666
Q ss_pred cCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEe
Q 042731 100 QNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 100 ~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~ 132 (481)
+..+|+++..+. .+-.+|+..|++.+.+.
T Consensus 228 ----~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 228 ----NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp ----TCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred ----CCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 899999998665 55688999999988754
No 92
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=40.48 E-value=22 Score=28.75 Aligned_cols=32 Identities=13% Similarity=0.306 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhc
Q 042731 7 IPFLALARRLEETNKYTITLVNTPLNLKKLKSS 39 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~ 39 (481)
.-.+=++..|++ +||+|++++++.....++.+
T Consensus 23 p~~lYl~~~Lk~-~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 23 PLAIYTSHKLKK-KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHh-cCCeeEEecCHHHHhheecc
Confidence 345667899999 99999999999888888763
No 93
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=39.39 E-value=1.7e+02 Score=24.50 Aligned_cols=142 Identities=22% Similarity=0.240 Sum_probs=79.6
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVE 345 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ 345 (481)
-|.|-|-+||.. +.....+....|+..|..+-+-+.+-+ ..|+.+.+-.+...
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH------------R~p~~l~~~~~~a~------------- 65 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAH------------RTPDRMFEYAKNAE------------- 65 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTT------------TCHHHHHHHHHHTT-------------
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc------------CCHHHHHHHHHHHH-------------
Confidence 356778888875 677788888889998888655443331 14544433222000
Q ss_pred hhcccCccceeeccCc-h---hHHHHHHhCCcEEecccccc--hhhhHHHHHHHh--cceEE-eeccCCcccCHHHHHHH
Q 042731 346 ILSHRSVSAFLSHCGW-N---SVLEALSHGVPIIGWPLAAE--QFYNSKLLEEEM--GVCVE-IARGMSCEVLKEDLSAK 416 (481)
Q Consensus 346 ll~~~~v~~~I~HGG~-g---t~~eal~~GvP~l~~P~~~D--Q~~na~~v~~~l--G~G~~-~~~~~~~~~~~~~l~~~ 416 (481)
...++.+|.=+|. + ++.-+ ..-+|+|.+|.... ....+-.---.+ |+.+. +.. +...++..++..
T Consensus 66 ---~~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I--d~~~nAa~lAaq 139 (183)
T 1o4v_A 66 ---ERGIEVIIAGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI--NNAKNAGILAAS 139 (183)
T ss_dssp ---TTTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT--TCHHHHHHHHHH
T ss_pred ---hCCCcEEEEecCcccccHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec--CCchHHHHHHHH
Confidence 0112235655553 2 33333 36789999998652 233332211122 43221 111 145567777777
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 417 IELVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
|. -++|+ .++++.+.++....+.+
T Consensus 140 Il-a~~d~----~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 140 IL-GIKYP----EIARKVKEYKERMKREV 163 (183)
T ss_dssp HH-HTTCH----HHHHHHHHHHHHHHHHH
T ss_pred HH-hcCCH----HHHHHHHHHHHHHHHHH
Confidence 75 44666 78888888888887654
No 94
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=38.97 E-value=63 Score=30.38 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=24.8
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCC
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPP 305 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 305 (481)
+.+|+.+.||.+... -...++++|.+.|.+++|+....
T Consensus 3 ~~i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp CEEEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECCc
Confidence 346666666654211 12457888999999999987544
No 95
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=38.96 E-value=76 Score=29.26 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=21.3
Q ss_pred CccEEEeCCCCchHHHHHHHhCCceEEEec
Q 042731 104 KPLCIITDTFLGWCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 104 ~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~ 133 (481)
+-|++|+.- ....++|..+|+|+|.++.
T Consensus 261 ~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 261 ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 458888753 4456778899999998764
No 96
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=38.87 E-value=1.5e+02 Score=29.51 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHh-------CCceEEE
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEY-------GIFHAIF 131 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~l-------giP~v~~ 131 (481)
.+.+++++. +||++|++.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~-------~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR-------QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH-------CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc-------CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 456777888 9999999964 67888899 9999864
No 97
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=38.63 E-value=88 Score=26.79 Aligned_cols=48 Identities=15% Similarity=0.017 Sum_probs=32.7
Q ss_pred hhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEE
Q 042731 254 ELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWV 301 (481)
Q Consensus 254 ~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 301 (481)
+-+.+|+.....+.++||..+|......+.+....++++..|..+.++
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 334556543334679999988775444466777899999999876554
No 98
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=38.23 E-value=19 Score=35.74 Aligned_cols=35 Identities=14% Similarity=-0.032 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEE
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIF 131 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 131 (481)
..+.+++++. +||++|+.. ....+|+++|||++.+
T Consensus 391 ~el~~~i~~~-------~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 391 RVLLKTVDEY-------QADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHT-------TCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHhc-------CCCEEEECC---chhHHHHHcCCCEEEe
Confidence 3456777777 999999974 4778999999999753
No 99
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.58 E-value=31 Score=30.27 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=63.8
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCC-----CCCCCC-CCCCCC----
Q 042731 4 GHIIPFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLP-----PCTENT-DSIPYH---- 73 (481)
Q Consensus 4 GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~-~~~~~~---- 73 (481)
|.+.-.+.+|+.+.+..|.+|.+.-+ .....+++. ..+.++.++.. ..|-+. ...... .-..+.
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr~~----~~iPVV~I~vs-~~Dil~aL~~a~~~~~kIavVg~~~~~~ 119 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLKSR----LSVPVILIKPS-GYDVLQFLAKAGKLTSSIGVVTYQETIP 119 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHHTT----CSSCEEEECCC-HHHHHHHHHHTTCTTSCEEEEEESSCCH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHHhh----CCCCEEEecCC-HHHHHHHHHHHHhhCCcEEEEeCchhhh
Confidence 45566778887765513588666654 344455553 34556666642 111110 001000 000111
Q ss_pred chHHHHHHHh--------hhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEec
Q 042731 74 LFPKFLQASA--------SLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 74 ~~~~~~~~~~--------~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~ 133 (481)
.+..+...+. ...+.+.+.++++... +.|+||++.. +..+|+++|+|.+.+.+
T Consensus 120 ~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~----G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 120 ALVAFQKTFNLRLDQRSYITEEDARGQINELKAN----GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT----TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC----CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 1122222221 1234566777777655 8999999854 78999999999999874
No 100
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=36.29 E-value=67 Score=25.30 Aligned_cols=31 Identities=6% Similarity=-0.083 Sum_probs=23.1
Q ss_pred CccEEEeCCCCc--hHHHHHHHh-------CCceEEEech
Q 042731 104 KPLCIITDTFLG--WCKETAQEY-------GIFHAIFIGG 134 (481)
Q Consensus 104 ~pD~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 134 (481)
+||+||.|...+ -|..+++++ .+|.+.++..
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 899999998776 566666654 5888776653
No 101
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=34.81 E-value=52 Score=30.78 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=50.3
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeec
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSH 358 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~H 358 (481)
.+.+....+.+++.....+.||.+.++. .-..+.++++...+-.+|.. ||-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~--------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 114 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM--------------------------NSNSLLPYIDYDAFQNNPKI--MIGY 114 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS--------------------------CGGGGGGGSCHHHHHHSCCE--EEEC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc--------------------------cHHHHhhhcChhHHhhCCeE--EEEe
Confidence 3466788899999999999999988763 11123456666666556665 7777
Q ss_pred cCchhHHHHHH--hCCcEEeccc
Q 042731 359 CGWNSVLEALS--HGVPIIGWPL 379 (481)
Q Consensus 359 GG~gt~~eal~--~GvP~l~~P~ 379 (481)
.-...+.-+++ .|+..+--|.
T Consensus 115 SDiTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 115 SDATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp GGGHHHHHHHHHHHCCCEEECCC
T ss_pred chHHHHHHHHHHhcCceEEECCh
Confidence 77766777765 4777777765
No 102
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=34.72 E-value=1.4e+02 Score=27.43 Aligned_cols=17 Identities=24% Similarity=0.079 Sum_probs=14.0
Q ss_pred cccCHHHHHHHHHHHhc
Q 042731 406 CEVLKEDLSAKIELVMN 422 (481)
Q Consensus 406 ~~~~~~~l~~~i~~vl~ 422 (481)
..++++.|.++|+++++
T Consensus 307 ~gl~~~~I~~~i~~~l~ 323 (324)
T 1w85_B 307 WLPNFKDVIETAKKVMN 323 (324)
T ss_dssp HSCCHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHhh
Confidence 45789999999998874
No 103
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=34.70 E-value=1.7e+02 Score=24.85 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=22.9
Q ss_pred CCCChHHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 2 AQGHIIPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 2 ~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
+.|-..-.+.+|..... +|++|.|+..-.
T Consensus 38 GkGKTTaA~GlalRA~g-~G~rV~~vQF~K 66 (196)
T 1g5t_A 38 GKGKTTAAFGTAARAVG-HGKNVGVVQFIK 66 (196)
T ss_dssp SSCHHHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCHHHHHHHHHHHHHH-CCCeEEEEEeeC
Confidence 55666777888888888 899999997654
No 104
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=34.39 E-value=38 Score=33.85 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEe
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFI 132 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~ 132 (481)
.+.+++++. +||++|.+. ....+|+++|||++.+.
T Consensus 363 el~~~i~~~-------~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARV-------EPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEecc---chHHHHHhcCCCeEecc
Confidence 557888888 999999884 47888999999999743
No 105
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=34.33 E-value=29 Score=27.09 Aligned_cols=29 Identities=14% Similarity=-0.122 Sum_probs=20.1
Q ss_pred CccEEEeCCCCc--hHHHHHHH---hCCceEEEe
Q 042731 104 KPLCIITDTFLG--WCKETAQE---YGIFHAIFI 132 (481)
Q Consensus 104 ~pD~vI~D~~~~--~~~~~A~~---lgiP~v~~~ 132 (481)
+||+||.|...+ -|..+++. .++|.|.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 899999997766 44455544 478866543
No 106
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=32.70 E-value=59 Score=30.25 Aligned_cols=27 Identities=19% Similarity=0.099 Sum_probs=22.6
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCC
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPP 305 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~ 305 (481)
.+.+....+.+++.....+.||...++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 346678889999999999999998776
No 107
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=32.39 E-value=24 Score=31.95 Aligned_cols=28 Identities=21% Similarity=0.258 Sum_probs=24.3
Q ss_pred ccceeeccCchhHHHHHHh------CCcEEeccc
Q 042731 352 VSAFLSHCGWNSVLEALSH------GVPIIGWPL 379 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~------GvP~l~~P~ 379 (481)
++++|+=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 4569999999999999875 899999975
No 108
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=32.00 E-value=1.4e+02 Score=27.75 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=24.9
Q ss_pred CCCChHHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 2 AQGHIIPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 2 ~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
+-|-..-...||..|++ .|++|.++..+.
T Consensus 26 GvGKTt~a~~lA~~la~-~g~~vllid~D~ 54 (334)
T 3iqw_A 26 GVGKTTTSCSLAIQLAK-VRRSVLLLSTDP 54 (334)
T ss_dssp TSSHHHHHHHHHHHHTT-SSSCEEEEECCS
T ss_pred CccHHHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 45667778899999999 999999999874
No 109
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.88 E-value=38 Score=33.26 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEE
Q 042731 88 HFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIF 131 (481)
Q Consensus 88 ~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 131 (481)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~-------~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE-------GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS-------CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356677777 9999999854 688899999999974
No 110
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=30.74 E-value=78 Score=33.10 Aligned_cols=114 Identities=7% Similarity=-0.003 Sum_probs=74.3
Q ss_pred EecccCHHHhhcccCccceeeccCchhHHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeec----cCCcccCHHH
Q 042731 337 VHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIAR----GMSCEVLKED 412 (481)
Q Consensus 337 v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~----~~~~~~~~~~ 412 (481)
+.++.+-.++|..+++ +||=- .+.+.|.+..++|+|....-.|++..- .+ |. ..+. -..-.-+.++
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~--y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GF--YMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SB--SSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-Cc--ccChhHhCCCCeECCHHH
Confidence 4456666788988776 88873 356789999999999987766665431 02 22 2221 0012346788
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHHHHHHHHh
Q 042731 413 LSAKIELVMNETEKGTDLRNKANEVKVIIKNAVRNETNFKGSSVKAMDQFLNAALI 468 (481)
Q Consensus 413 l~~~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 468 (481)
|.++|.....+. +.|+++.+++.+.+-.. .+|.++.+.++.+++....
T Consensus 673 L~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-----~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 673 LAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-----DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-----CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc---hhHHHHHHHHHHHhCCc-----cCChHHHHHHHHHHhcCcC
Confidence 999988876532 15777777777777533 5677777777777665443
No 111
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=30.72 E-value=74 Score=29.14 Aligned_cols=28 Identities=4% Similarity=-0.071 Sum_probs=21.3
Q ss_pred CccEEEeCCCCchHHHHHHHhCCceEEEec
Q 042731 104 KPLCIITDTFLGWCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 104 ~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~ 133 (481)
+-|++|+.- ....++|..+|+|++.++.
T Consensus 253 ~a~l~I~~D--SG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 253 GAKFVVSVD--TGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp TCSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred hCCEEEecC--CcHHHHHHHcCCCEEEEEC
Confidence 458888763 4466778889999998864
No 112
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=30.55 E-value=1.9e+02 Score=28.12 Aligned_cols=147 Identities=18% Similarity=0.095 Sum_probs=73.9
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEe-cccCHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVH-KWAPQV 344 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~-~~ip~~ 344 (481)
+.++.|..|.+. ...+..|...|..+.++.... .+++.+... ..++.+. +-...
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~---------------~~~~~~l~~--~~~i~~~~~~~~~- 67 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF---------------IPQFTVWAN--EGMLTLVEGPFDE- 67 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC---------------CHHHHHHHT--TTSCEEEESSCCG-
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC---------------CHHHHHHHh--cCCEEEEECCCCc-
Confidence 557777777765 345566777888877765422 223322222 2233322 22222
Q ss_pred HhhcccCccceeeccCchh-----HHHHHHhCCcEEec--ccccchhhhHHHHHHH-hcceEEeeccCCcccCHHHHHHH
Q 042731 345 EILSHRSVSAFLSHCGWNS-----VLEALSHGVPIIGW--PLAAEQFYNSKLLEEE-MGVCVEIARGMSCEVLKEDLSAK 416 (481)
Q Consensus 345 ~ll~~~~v~~~I~HGG~gt-----~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~-lG~G~~~~~~~~~~~~~~~l~~~ 416 (481)
..|..++ .+|.--|.-. ..+|-..|+|+-++ |-..+..+-| .+.+. +=+|+. ..|+. -.-+..|++.
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs-T~Gks-p~la~~ir~~ 142 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS-SGGTS-PVLARLLREK 142 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE-CTTSC-HHHHHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE-CCCCC-hHHHHHHHHH
Confidence 2344444 4777767543 34566779997433 2222222100 00112 124444 22111 1125677777
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 042731 417 IELVMNETEKGTDLRNKANEVKVIIKNA 444 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~~~~~~~~~~ 444 (481)
|...+.+. ...+.+.+.++++.+++.
T Consensus 143 ie~~l~~~--~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 143 LESLLPQH--LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHSCTT--HHHHHHHHHHHHHHHHHH
T ss_pred HHHhcchh--HHHHHHHHHHHHHHHHhh
Confidence 87777653 235777777777777754
No 113
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=30.45 E-value=82 Score=29.05 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=54.6
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhc-ccCccceee
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILS-HRSVSAFLS 357 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~-~~~v~~~I~ 357 (481)
.+.+....+.+++.....+.||.+.++. .-..+.++++...+-. +|.. ||-
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGy--------------------------ga~rlLp~LD~~~i~~a~PK~--~iG 115 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGY--------------------------GCGQLLPGLDWGRLQAASPRP--LIG 115 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSS--------------------------CGGGGTTTCCHHHHHHSCCCC--EEE
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCc--------------------------CHHHHhhccchhhhhccCCCE--EEE
Confidence 4567788899999999999999988763 1112346676666666 7776 888
Q ss_pred ccCchhHHHHHH-hCCcEEecccc
Q 042731 358 HCGWNSVLEALS-HGVPIIGWPLA 380 (481)
Q Consensus 358 HGG~gt~~eal~-~GvP~l~~P~~ 380 (481)
+.-...+.-+++ .|.+.+--|..
T Consensus 116 ySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 116 FSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp CGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EchhHHHHHHHHHcCCcEEECHhh
Confidence 888888888876 48888777754
No 114
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=29.84 E-value=48 Score=33.32 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEE
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIF 131 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 131 (481)
..+.++++.. +||++|+.. ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~-------~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL-------KPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc-------CCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4567888888 999999874 3688999999999853
No 115
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=28.89 E-value=60 Score=32.75 Aligned_cols=26 Identities=15% Similarity=0.187 Sum_probs=21.7
Q ss_pred cceeeccCc------hhHHHHHHhCCcEEecc
Q 042731 353 SAFLSHCGW------NSVLEALSHGVPIIGWP 378 (481)
Q Consensus 353 ~~~I~HGG~------gt~~eal~~GvP~l~~P 378 (481)
.++++|.|- +.++||-+.++|+|++-
T Consensus 68 ~v~~~TsGpG~~N~~~~l~~A~~~~~Pll~it 99 (563)
T 2uz1_A 68 GVALVTAGGGFTNAVTPIANAWLDRTPVLFLT 99 (563)
T ss_dssp EEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEccCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 348888885 58889999999999984
No 116
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=28.44 E-value=3e+02 Score=27.53 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=22.5
Q ss_pred ccceeeccCc------hhHHHHHHhCCcEEecc
Q 042731 352 VSAFLSHCGW------NSVLEALSHGVPIIGWP 378 (481)
Q Consensus 352 v~~~I~HGG~------gt~~eal~~GvP~l~~P 378 (481)
..++++|.|- +.++||-+.++|+|++-
T Consensus 74 p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 74 AGVALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4458899885 68889999999999984
No 117
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=28.41 E-value=55 Score=30.61 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=24.7
Q ss_pred HHHHHHHhhccCCCCccEEEeCCCCc-hHHHHHHHhCCceEEEe
Q 042731 90 KKLISELVNEQNGQKPLCIITDTFLG-WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 90 ~~ll~~~~~~~~~~~pD~vI~D~~~~-~~~~~A~~lgiP~v~~~ 132 (481)
.+.|-.+ +||+||...... -...+.+++|||++.+.
T Consensus 89 ~E~Ilal-------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 89 LESLITL-------QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHHH-------CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHHhcC-------CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3556677 999999875432 22344567899999864
No 118
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.97 E-value=1.8e+02 Score=26.46 Aligned_cols=29 Identities=17% Similarity=0.121 Sum_probs=24.1
Q ss_pred ccceeeccCchhHHHHHH------hCCcEEecccc
Q 042731 352 VSAFLSHCGWNSVLEALS------HGVPIIGWPLA 380 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~------~GvP~l~~P~~ 380 (481)
.+.+|.-||=||+.|++. .++|+-++|..
T Consensus 64 ~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 64 VDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp CSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 345999999999999864 57899999983
No 119
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.78 E-value=33 Score=31.69 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=23.8
Q ss_pred ccceeeccCchhHHHHHHh----CCcEEeccc
Q 042731 352 VSAFLSHCGWNSVLEALSH----GVPIIGWPL 379 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~----GvP~l~~P~ 379 (481)
++++|+-||=||+.+++.. ++|+++++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4459999999999999754 899999974
No 120
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.33 E-value=35 Score=31.14 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=23.4
Q ss_pred ccceeeccCchhHHHHHHh----CCcEEeccc
Q 042731 352 VSAFLSHCGWNSVLEALSH----GVPIIGWPL 379 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~----GvP~l~~P~ 379 (481)
++++|+=||=||+.+++.. ++|+++++.
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3459999999999999853 789999974
No 121
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=27.28 E-value=2.9e+02 Score=24.54 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=23.4
Q ss_pred CccEEE-eCCCCc-hHHHHHHHhCCceEEEech
Q 042731 104 KPLCII-TDTFLG-WCKETAQEYGIFHAIFIGG 134 (481)
Q Consensus 104 ~pD~vI-~D~~~~-~~~~~A~~lgiP~v~~~~~ 134 (481)
.||+|| .|+..- .+..-|.++|||.|.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 688776 565433 7788899999999997653
No 122
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=27.09 E-value=2.7e+02 Score=23.77 Aligned_cols=90 Identities=9% Similarity=0.003 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhCC--CCEEEEEeCCc----chhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 042731 8 PFLALARRLEETN--KYTITLVNTPL----NLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQA 81 (481)
Q Consensus 8 P~l~LA~~L~~~~--Gh~Vt~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 81 (481)
-+.++.+.|.+ . +|+|..+.+.. ..+++++ .++.+..++. .... .
T Consensus 16 ~~~~~l~~l~~-~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~--------~~~~---~------------ 66 (212)
T 3av3_A 16 NFQAIVDAAKR-GDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSP--------KDYP---S------------ 66 (212)
T ss_dssp HHHHHHHHHHT-TCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCG--------GGSS---S------------
T ss_pred HHHHHHHHHHh-CCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCc--------cccc---c------------
Confidence 36677888888 6 78998777543 2233444 5555554331 1000 0
Q ss_pred HhhhhHHHHHHHHHHhhccCCCCccEEEeCCCC-chHHHHHHHhCCceEEEec
Q 042731 82 SASLEPHFKKLISELVNEQNGQKPLCIITDTFL-GWCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 82 ~~~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 133 (481)
-....+.+.+.++++ +||+||.-.+. .....+-......++-+.+
T Consensus 67 ~~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 67 KAAFESEILRELKGR-------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred hhhhHHHHHHHHHhc-------CCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 011233456778888 99999987653 3455566666677776655
No 123
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.97 E-value=3.3e+02 Score=27.45 Aligned_cols=28 Identities=14% Similarity=0.340 Sum_probs=23.2
Q ss_pred CccceeeccC------chhHHHHHHhCCcEEecc
Q 042731 351 SVSAFLSHCG------WNSVLEALSHGVPIIGWP 378 (481)
Q Consensus 351 ~v~~~I~HGG------~gt~~eal~~GvP~l~~P 378 (481)
...++++|.| .+.+.+|-+.++|+|++-
T Consensus 68 k~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 68 NLGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 3456899988 568889999999999984
No 124
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=26.80 E-value=44 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=24.7
Q ss_pred hhcccCccceeeccCchhHHH---HHHhCCcEEeccc
Q 042731 346 ILSHRSVSAFLSHCGWNSVLE---ALSHGVPIIGWPL 379 (481)
Q Consensus 346 ll~~~~v~~~I~HGG~gt~~e---al~~GvP~l~~P~ 379 (481)
+...++ ..++--||.||+-| ++.+++|+++++.
T Consensus 115 m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 115 LLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 444555 36788899998764 6889999999963
No 125
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.70 E-value=2.9e+02 Score=25.15 Aligned_cols=82 Identities=11% Similarity=-0.003 Sum_probs=49.1
Q ss_pred HHHHHHHHhCCCCEEEEEeCCc--chhhhh---hcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhh
Q 042731 10 LALARRLEETNKYTITLVNTPL--NLKKLK---SSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASAS 84 (481)
Q Consensus 10 l~LA~~L~~~~Gh~Vt~~~~~~--~~~~i~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 84 (481)
..|+++|.+ +||+|+.++-.. ...... .... .+++++..++.
T Consensus 24 ~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~~~l~~--~~v~~~~~Dl~------------------------------ 70 (346)
T 3i6i_A 24 QFVATASLD-AHRPTYILARPGPRSPSKAKIFKALED--KGAIIVYGLIN------------------------------ 70 (346)
T ss_dssp HHHHHHHHH-TTCCEEEEECSSCCCHHHHHHHHHHHH--TTCEEEECCTT------------------------------
T ss_pred HHHHHHHHH-CCCCEEEEECCCCCChhHHHHHHHHHh--CCcEEEEeecC------------------------------
Confidence 467899999 899999998654 111111 1001 45666543321
Q ss_pred hhHHHHHHHHHHhhccCCCCccEEEeCCCCc------hHHHHHHHhC-CceEEE
Q 042731 85 LEPHFKKLISELVNEQNGQKPLCIITDTFLG------WCKETAQEYG-IFHAIF 131 (481)
Q Consensus 85 ~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~------~~~~~A~~lg-iP~v~~ 131 (481)
-.+.+.+++++. ++|+||+-.-.. -...+|.+.| ++.+++
T Consensus 71 d~~~l~~~~~~~-------~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 71 EQEAMEKILKEH-------EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CHHHHHHHHHHT-------TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CHHHHHHHHhhC-------CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 122345666666 799999864321 2346777788 887764
No 126
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=26.62 E-value=45 Score=29.37 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCc
Q 042731 9 FLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 9 ~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
-.+||++|.+ +|++|++++.+.
T Consensus 32 G~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHH-CCCEEEEEeCCc
Confidence 3578999999 999999999763
No 127
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=26.58 E-value=2.4e+02 Score=24.24 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCc
Q 042731 282 SQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGW 361 (481)
Q Consensus 282 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~ 361 (481)
++-.++++.++..+..++++.+.. .-+|+.+.+..+ .+-+-+ |++. .=..-|.
T Consensus 76 ~~d~~~~~~l~~~~~Dlivlagy~------------~iL~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~ 128 (215)
T 3da8_A 76 AWDVAITAATAAHEPDLVVSAGFM------------RILGPQFLSRFY--GRTLNT-----------HPAL--LPAFPGT 128 (215)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECC------------SCCCHHHHHHHT--TTEEEE-----------ESSC--TTSSCST
T ss_pred hhhHHHHHHHHhhCCCEEEEcCch------------hhCCHHHHhhcc--CCeEEe-----------Cccc--ccCCCCc
Confidence 334568888999999999998876 348888877655 333333 4443 2334689
Q ss_pred hhHHHHHHhCCcEEeccccc-chh-hhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 362 NSVLEALSHGVPIIGWPLAA-EQF-YNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 362 gt~~eal~~GvP~l~~P~~~-DQ~-~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
..+..|+.+|+...++-.+. |.. .....+.+ .-+.+. ..-|.+.|.+++.++
T Consensus 129 ~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q---~~v~I~----~~dt~~~L~~rl~~~ 182 (215)
T 3da8_A 129 HGVADALAYGVKVTGATVHLVDAGTDTGPILAQ---QPVPVL----DGDDEETLHERIKVT 182 (215)
T ss_dssp THHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEeecC----CCCCHHHHHHHHHHH
Confidence 99999999999998876542 222 22211221 122222 345777887777654
No 128
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=26.47 E-value=1.5e+02 Score=26.76 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=51.0
Q ss_pred HHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhhhHHHHHHHH
Q 042731 15 RLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASASLEPHFKKLIS 94 (481)
Q Consensus 15 ~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 94 (481)
.|.. ...+..+++++.+.-+... -|++...+-. ..++.+ +. ......+.+.++
T Consensus 171 ~l~~-~~~~~~v~~H~af~Yf~~~-----yGl~~~~~~~------~~~~~e-----ps----------~~~l~~l~~~ik 223 (284)
T 3cx3_A 171 KFEK-ATQKTFVTQHTAFSYLAKR-----FGLNQLGIAG------ISPEQE-----PS----------PRQLTEIQEFVK 223 (284)
T ss_dssp HHHS-CSCCCEEEEESCCHHHHHH-----TTCCEEEEEC------SSTTCC-----CC----------SHHHHHHHHHHH
T ss_pred HHhc-CCCCEEEEECCchHHHHHH-----cCCEEeeccC------CCCCCC-----CC----------HHHHHHHHHHHH
Confidence 3444 3445556677778777777 5566554431 111111 00 123344566666
Q ss_pred HHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEe
Q 042731 95 ELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 95 ~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~ 132 (481)
+. +..+|+++.... .+..+|+..|++.+.+.
T Consensus 224 ~~-------~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 224 TY-------KVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp HT-------TCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred Hc-------CCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 66 899999997665 56688999999988653
No 129
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=26.26 E-value=4.1e+02 Score=25.56 Aligned_cols=139 Identities=15% Similarity=0.094 Sum_probs=75.7
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccC-CCcEEEecccCHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCS-GQGLVVHKWAPQV 344 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~v~~~ip~~ 344 (481)
.+.|-|-+||.. +.....+....++..|..+-+-+.+-+ ..|+.+.+-.+.. .++.
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saH------------R~p~~~~~~~~~~~~~g~--------- 321 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAH------------KGPDETLRIKAEYEGDGI--------- 321 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TCHHHHHHHHHHHHTTCC---------
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeecc------------CCHHHHHHHHHHHHHCCC---------
Confidence 456777788775 677788888999998888655444332 1444433211100 1111
Q ss_pred HhhcccCccceeeccCc-h---hHHHHHHhCCcEEeccccc-chhhhHH-HHHH--HhcceEEeeccCCcccCHHHHHHH
Q 042731 345 EILSHRSVSAFLSHCGW-N---SVLEALSHGVPIIGWPLAA-EQFYNSK-LLEE--EMGVCVEIARGMSCEVLKEDLSAK 416 (481)
Q Consensus 345 ~ll~~~~v~~~I~HGG~-g---t~~eal~~GvP~l~~P~~~-DQ~~na~-~v~~--~lG~G~~~~~~~~~~~~~~~l~~~ 416 (481)
..| +|.=+|. + ++..+ ..-+|+|.+|... .+...+- -+.+ . |+.+..-. ...++..++..
T Consensus 322 -----~~v--iIa~AG~~a~Lpgvva~-~t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~---~~~nAa~~A~~ 389 (425)
T 2h31_A 322 -----PTV--FVAVAGRSNGLGPVMSG-NTAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL---SPEGSAQFAAQ 389 (425)
T ss_dssp -----CEE--EEEECCSSCCHHHHHHH-HCSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC---CHHHHHHHHHH
T ss_pred -----CeE--EEEEcCcccchHhHHhc-cCCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec---CchHHHHHHHH
Confidence 012 5555554 2 44433 3579999999852 2221111 0111 2 44433322 23466677766
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 042731 417 IELVMNETEKGTDLRNKANEVKVIIKNA 444 (481)
Q Consensus 417 i~~vl~~~~~~~~~~~~a~~~~~~~~~~ 444 (481)
|. .++|+ .++++.+..+......
T Consensus 390 Il-~~~~~----~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 390 IF-GLSNH----LVWSKLRASILNTWIS 412 (425)
T ss_dssp HH-HTTCH----HHHHHHHHHHHHHHHH
T ss_pred HH-ccCCH----HHHHHHHHHHHHHHHH
Confidence 65 44666 6777777777776544
No 130
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=26.17 E-value=2.6e+02 Score=27.91 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=21.5
Q ss_pred cceeeccCch------hHHHHHHhCCcEEecc
Q 042731 353 SAFLSHCGWN------SVLEALSHGVPIIGWP 378 (481)
Q Consensus 353 ~~~I~HGG~g------t~~eal~~GvP~l~~P 378 (481)
+++++|.|-| .++||-+.++|+|++-
T Consensus 72 gv~~~TsGpG~~N~~~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 72 GICLTVSAPGFLNGLTALANATVNGFPMIMIS 103 (564)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEccCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 4588898854 6779999999999984
No 131
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=25.70 E-value=75 Score=31.38 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCC-CCCCCCchHHHHHHH---h
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENT-DSIPYHLFPKFLQAS---A 83 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~---~ 83 (481)
-++.+|+.|.+ .|.++. ++.-..+.+++ .|+.+..+. ..-++|+-...+ ..+. -+....+ .
T Consensus 22 glvelAk~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~---~vTgfPEil~GRVKTLH----P~ihgGiLa~r 86 (523)
T 3zzm_A 22 GLVDLAQGLSA-AGVEII--STGSTAKTIAD-----TGIPVTPVE---QLTGFPEVLDGRVKTLH----PRVHAGLLADL 86 (523)
T ss_dssp THHHHHHHHHH-TTCEEE--ECHHHHHHHHT-----TTCCCEEHH---HHHSCCCCTTTTSSSCS----HHHHHHHHCCT
T ss_pred cHHHHHHHHHH-CCCEEE--EcchHHHHHHH-----cCCceeecc---ccCCCchhhCCccccCC----chhhhhhccCC
Confidence 36889999999 898875 55566778888 555565544 223445543332 1221 2444444 2
Q ss_pred hhhHHHHHHHHHHhhccCCCCccEEEeCCCCchHHHHH
Q 042731 84 SLEPHFKKLISELVNEQNGQKPLCIITDTFLGWCKETA 121 (481)
Q Consensus 84 ~~~~~~~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A 121 (481)
....++.+ +++.... ..|+||++.+ ++-..++
T Consensus 87 ~~~~h~~~-l~~~~i~----~iDlVvvNLY-PF~~tv~ 118 (523)
T 3zzm_A 87 RKSEHAAA-LEQLGIE----AFELVVVNLY-PFSQTVE 118 (523)
T ss_dssp TSHHHHHH-HHHHTCC----CCSEEEEECC-CHHHHHH
T ss_pred CCHHHHHH-HHHCCCC----ceeEEEEeCC-ChHHHHh
Confidence 23334333 4444222 5699999954 5444343
No 132
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=25.63 E-value=2.9e+02 Score=23.00 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=77.3
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccC-CCcEEEecccCHH
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCS-GQGLVVHKWAPQV 344 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~v~~~ip~~ 344 (481)
+|.|-|-+||.. +....++..+.|+..+..+-+.+...+ ..|+.+.+..+.. .++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH------------Rtp~~l~~~~~~a~~~g---------- 77 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH------------RTPDYMFEYAETARERG---------- 77 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHHHHHTTTTT----------
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc------------cChHHHHHHHHHHHhcC----------
Confidence 567888889886 677888899999999887655544332 1444443322210 111
Q ss_pred HhhcccCccceeeccCc-h---hHHHHHHhCCcEEecccccch--hhhHH-HHHHHh-cceEEe-eccCCcccCHHHHHH
Q 042731 345 EILSHRSVSAFLSHCGW-N---SVLEALSHGVPIIGWPLAAEQ--FYNSK-LLEEEM-GVCVEI-ARGMSCEVLKEDLSA 415 (481)
Q Consensus 345 ~ll~~~~v~~~I~HGG~-g---t~~eal~~GvP~l~~P~~~DQ--~~na~-~v~~~l-G~G~~~-~~~~~~~~~~~~l~~ 415 (481)
++.+|.=.|. + ++. |-..-+|+|.+|..... ...+- -+.+.- |+.+.- ..+.....++..++.
T Consensus 78 -------~~ViIa~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~ 149 (181)
T 4b4k_A 78 -------LKVIIAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAA 149 (181)
T ss_dssp -------CCEEEEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHH
T ss_pred -------ceEEEEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHH
Confidence 2235555443 2 222 33456899999986532 22221 222120 333222 111112234555555
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHHHHh
Q 042731 416 KIELVMNETEKGTDLRNKANEVKVIIKNAV 445 (481)
Q Consensus 416 ~i~~vl~~~~~~~~~~~~a~~~~~~~~~~~ 445 (481)
.|.. +.|+ +++++.+.+++.+++.+
T Consensus 150 qILa-~~d~----~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 150 QILG-SFHD----DIHDALELRREAIEKDV 174 (181)
T ss_dssp HHHT-TTCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHc-cCCH----HHHHHHHHHHHHHHHHH
Confidence 5533 3555 78888888888877554
No 133
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=25.46 E-value=1.7e+02 Score=25.98 Aligned_cols=39 Identities=21% Similarity=0.357 Sum_probs=29.8
Q ss_pred CeEEEEEcccccccCHHHHHHHHHHHHhc--CCceEEEEcC
Q 042731 266 TSVLYVSFGSQNTIAASQMMQLAMALEAS--GKNFIWVVRP 304 (481)
Q Consensus 266 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~ 304 (481)
+.+|+|++||......+.+..+.+.++.. +..+.|....
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 56999999998765556777888888763 5678888664
No 134
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=25.33 E-value=3.2e+02 Score=23.32 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=48.6
Q ss_pred HHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchhH
Q 042731 285 MQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNSV 364 (481)
Q Consensus 285 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~ 364 (481)
.++.+.++..+..++++.+.. .-+|+.+....+ .+-+-+ |++. .=...|...+
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~pi 121 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFM------------RILSGPFVQKWN--GKMLNI-----------HPSL--LPSFKGSNAH 121 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCC------------SCCCHHHHHHTT--TSEEEE-----------ESSS--TTSSCSSCHH
T ss_pred HHHHHHHHhcCCCEEEEcchh------------hhCCHHHHhhhc--CCEEEE-----------ccCc--CcCCCCccHH
Confidence 457888888888999998876 337887776554 222333 4443 3335688999
Q ss_pred HHHHHhCCcEEecccc
Q 042731 365 LEALSHGVPIIGWPLA 380 (481)
Q Consensus 365 ~eal~~GvP~l~~P~~ 380 (481)
..|+.+|....++-.+
T Consensus 122 ~~Ai~~G~~~tGvTvh 137 (209)
T 1meo_A 122 EQALETGVTVTGCTVH 137 (209)
T ss_dssp HHHHHHTCSEEEEEEE
T ss_pred HHHHHcCCCcEEEEEE
Confidence 9999999999877654
No 135
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=25.25 E-value=2.1e+02 Score=24.08 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=28.2
Q ss_pred EEecccCHH-H-hhcccCccceeeccCchhHHHH---H------HhCCcEEeccc
Q 042731 336 VVHKWAPQV-E-ILSHRSVSAFLSHCGWNSVLEA---L------SHGVPIIGWPL 379 (481)
Q Consensus 336 ~v~~~ip~~-~-ll~~~~v~~~I~HGG~gt~~ea---l------~~GvP~l~~P~ 379 (481)
++.++.+.. . +...++ ..++--||.||+-|. + .+++|++++-.
T Consensus 82 ~~~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 82 IEVNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred ccCCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 334555542 3 334444 478889999998754 5 38899999853
No 136
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=25.25 E-value=19 Score=34.92 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 6 IIPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 6 v~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
......||++|.+ +||+|++++...
T Consensus 65 ~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 65 ISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp HHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred HHHHHHHHHHHHH-cCCceEEEEecC
Confidence 3568899999999 999999999753
No 137
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=25.15 E-value=61 Score=28.33 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhhccCCCCccEEEeCCCCc-------hHHHHHHHhCCceEEEe
Q 042731 87 PHFKKLISELVNEQNGQKPLCIITDTFLG-------WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 87 ~~~~~ll~~~~~~~~~~~pD~vI~D~~~~-------~~~~~A~~lgiP~v~~~ 132 (481)
+.+.++++++.. +||+|++|..-. .|.++...+|+|+|-+.
T Consensus 91 P~~l~al~~L~~-----~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRT-----KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCS-----CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCC-----CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 344555666532 699999996433 35567777899999765
No 138
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.01 E-value=77 Score=27.88 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhhccCCCCccEEEeCCCC-------chHHHHHHHhCCceEEEe
Q 042731 86 EPHFKKLISELVNEQNGQKPLCIITDTFL-------GWCKETAQEYGIFHAIFI 132 (481)
Q Consensus 86 ~~~~~~ll~~~~~~~~~~~pD~vI~D~~~-------~~~~~~A~~lgiP~v~~~ 132 (481)
.+.+.++++++.. +||++++|..- ..|..+.-.+|+|+|-+.
T Consensus 94 ~P~ll~al~~L~~-----~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALPC-----PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSSS-----CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcCC-----CCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 3455666666632 79999999542 356677788899999754
No 139
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=24.91 E-value=62 Score=30.95 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=25.2
Q ss_pred HHhhcccCccceeeccCchhHHHHHHh----CC-cEEeccc
Q 042731 344 VEILSHRSVSAFLSHCGWNSVLEALSH----GV-PIIGWPL 379 (481)
Q Consensus 344 ~~ll~~~~v~~~I~HGG~gt~~eal~~----Gv-P~l~~P~ 379 (481)
..+-..++ ++|+=||=||+..|+.. ++ |++++..
T Consensus 109 ~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 33434445 59999999999999764 67 7999853
No 140
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=24.74 E-value=3.8e+02 Score=24.05 Aligned_cols=79 Identities=13% Similarity=-0.006 Sum_probs=49.1
Q ss_pred CCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhhhHHHHHHHHHHhhc
Q 042731 20 NKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASASLEPHFKKLISELVNE 99 (481)
Q Consensus 20 ~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 99 (481)
..-+..+++.+.+.-+... .|++...+... + ..+. ......+.+++++.
T Consensus 188 ~~~~~~v~~H~af~Yf~~~-----yGl~~~~~~~~--------~-----~eps----------~~~l~~l~~~ik~~--- 236 (291)
T 1pq4_A 188 LPQRKFIVFHPSWAYFARD-----YNLVQIPIEVE--------G-----QEPS----------AQELKQLIDTAKEN--- 236 (291)
T ss_dssp CSCCEEEESSCCCHHHHHH-----TTCEEEESCBT--------T-----BCCC----------HHHHHHHHHHHHTT---
T ss_pred CCCCEEEEECCchHHHHHH-----CCCEEeecccC--------C-----CCCC----------HHHHHHHHHHHHHc---
Confidence 3345556667777777777 66776544310 0 1110 12233445555555
Q ss_pred cCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEec
Q 042731 100 QNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 100 ~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~~ 133 (481)
+..+|+++..+. .+-.+|+..|++.+.+.+
T Consensus 237 ----~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~ 268 (291)
T 1pq4_A 237 ----NLTMVFGETQFSTKSSEAIAAEIGAGVELLDP 268 (291)
T ss_dssp ----TCCEEEEETTSCCHHHHHHHHHHTCEEEEECT
T ss_pred ----CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcC
Confidence 899999997665 566889999999887654
No 141
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=24.56 E-value=2.8e+02 Score=23.66 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=64.9
Q ss_pred HHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchh
Q 042731 284 MMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNS 363 (481)
Q Consensus 284 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt 363 (481)
-.++++.++..+..++++.+.. .-+|+.+.+..+ .+-+-+ |++. .=...|...
T Consensus 71 ~~~~~~~l~~~~~Dliv~a~y~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 123 (212)
T 3av3_A 71 ESEILRELKGRQIDWIALAGYM------------RLIGPTLLSAYE--GKIVNI-----------HPSL--LPAFPGKDA 123 (212)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC------------SCCCHHHHHHTT--TCEEEE-----------ESSC--TTSSCSTTH
T ss_pred HHHHHHHHHhcCCCEEEEchhh------------hhCCHHHHhhhc--CCEEEE-----------ecCc--CCCCCCcCH
Confidence 3468888888888999988876 347888877654 333333 4443 334568999
Q ss_pred HHHHHHhCCcEEeccccc-ch-hhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 364 VLEALSHGVPIIGWPLAA-EQ-FYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 364 ~~eal~~GvP~l~~P~~~-DQ-~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
+..|+.+|....++-.+. |. ...+..+.+. -+.+. ..-|.+.|.+++.++
T Consensus 124 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~r~~~~ 175 (212)
T 3av3_A 124 IGQAYRAGVSETGVTVHYVDEGMDTGPVIAQR---VVPIV----PGEPIEALEERIHQV 175 (212)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEECCCCCCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 999999999998886542 32 2222222211 22222 345788888877654
No 142
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=24.47 E-value=93 Score=23.73 Aligned_cols=60 Identities=18% Similarity=0.057 Sum_probs=40.3
Q ss_pred ceeeccCchh---------HHHHHHhCCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhc
Q 042731 354 AFLSHCGWNS---------VLEALSHGVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMN 422 (481)
Q Consensus 354 ~~I~HGG~gt---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~ 422 (481)
++|.-.|..| +-.|...|+|+|++=-++.+. .-..+++. |..+- ..+.+.|.++|+..++
T Consensus 41 ~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~---a~~iV-----~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 41 AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV---SSEVV-----GWNPHCIRDALEDALD 109 (111)
T ss_dssp EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH---CSEEE-----CSCHHHHHHHHHHHHC
T ss_pred EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh---Cceec-----cCCHHHHHHHHHhccC
Confidence 3888888776 567888999999987766542 11224423 32332 3688999999988754
No 143
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.22 E-value=30 Score=30.09 Aligned_cols=44 Identities=11% Similarity=0.011 Sum_probs=29.0
Q ss_pred EEEecccCHH--HhhcccCccceeeccCchhHHHHH---------HhCCcEEeccc
Q 042731 335 LVVHKWAPQV--EILSHRSVSAFLSHCGWNSVLEAL---------SHGVPIIGWPL 379 (481)
Q Consensus 335 ~~v~~~ip~~--~ll~~~~v~~~I~HGG~gt~~eal---------~~GvP~l~~P~ 379 (481)
+.+....+.. .+..+++. .++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3344444432 23444443 678899999988776 47999998853
No 144
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=24.13 E-value=2.2e+02 Score=24.51 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=28.2
Q ss_pred EEecccCHH-H-hhcccCccceeeccCchhHHHHHH---------hCCcEEeccc
Q 042731 336 VVHKWAPQV-E-ILSHRSVSAFLSHCGWNSVLEALS---------HGVPIIGWPL 379 (481)
Q Consensus 336 ~v~~~ip~~-~-ll~~~~v~~~I~HGG~gt~~eal~---------~GvP~l~~P~ 379 (481)
.+....+.. . +...++ ..++--||.||+-|..- +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344555542 3 333444 46788999999987762 4899998854
No 145
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=23.97 E-value=1.6e+02 Score=26.95 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=49.9
Q ss_pred HHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhhhHHHHHHHH
Q 042731 15 RLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIPFNSVEHDLPPCTENTDSIPYHLFPKFLQASASLEPHFKKLIS 94 (481)
Q Consensus 15 ~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 94 (481)
.|.. ...+..+++++.+.-+... -|++...+. +..++.+ + ..+.+.++++
T Consensus 184 ~l~~-~~~~~~v~~H~af~Yfa~~-----yGl~~~~~~------~~~~~~e-----p-------------s~~~l~~l~~ 233 (312)
T 2o1e_A 184 TAKK-AEKKEFITQHTAFGYLAKE-----YGLKQVPIA------GLSPDQE-----P-------------SAASLAKLKT 233 (312)
T ss_dssp HHHS-CSCCEEEESSCTTHHHHHH-----TTCEEEECS------SCCSSSC-----C-------------CHHHHHHHHH
T ss_pred Hhhc-cCCCEEEEECCchHHHHHH-----CCCeEEEee------ccCCCCC-----C-------------CHHHHHHHHH
Confidence 3444 4445566677777777777 667765443 1111100 1 1223344444
Q ss_pred HHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEe
Q 042731 95 ELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 95 ~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~ 132 (481)
..... +..+|+++..+. .+..+|+..|++.+.+.
T Consensus 234 ~ik~~----~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 234 YAKEH----NVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp HTTSS----CCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHc----CCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 44322 899999998766 46688999999987643
No 146
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.93 E-value=54 Score=30.45 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=24.9
Q ss_pred HHHHHHHhhccCCCCccEEEeCCCCchHHHHHHHhCCceEEEec
Q 042731 90 KKLISELVNEQNGQKPLCIITDTFLGWCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 90 ~~ll~~~~~~~~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~ 133 (481)
.+.|..+ +||+||......-...--++.|||.+.+..
T Consensus 109 ~E~i~al-------~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 109 TEACVAA-------TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHHT-------CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHhc-------CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 3566677 999999875422233344567999998753
No 147
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=23.50 E-value=2.7e+02 Score=28.74 Aligned_cols=27 Identities=19% Similarity=0.450 Sum_probs=22.3
Q ss_pred ccceeeccCc------hhHHHHHHhCCcEEecc
Q 042731 352 VSAFLSHCGW------NSVLEALSHGVPIIGWP 378 (481)
Q Consensus 352 v~~~I~HGG~------gt~~eal~~GvP~l~~P 378 (481)
.++++++.|- +.+++|-+.++|+|++-
T Consensus 146 pgvv~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 146 PGVVLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3458888885 47889999999999985
No 148
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.50 E-value=3.1e+02 Score=23.50 Aligned_cols=104 Identities=17% Similarity=0.263 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCch
Q 042731 283 QMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWN 362 (481)
Q Consensus 283 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~g 362 (481)
+-.++++.++..+..++++.+.. ..+|+.+....+ .+-+-+ |++. .=...|..
T Consensus 69 ~d~~~~~~l~~~~~Dliv~agy~------------~Il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~ 121 (211)
T 3p9x_A 69 YEIEVVQQLKEKQIDFVVLAGYM------------RLVGPTLLGAYE--GRIVNI-----------HPSL--LPAFPGLH 121 (211)
T ss_dssp HHHHHHHHHHHTTCCEEEESSCC------------SCCCHHHHHHHT--TSEEEE-----------ESSC--TTSSCSSC
T ss_pred hHHHHHHHHHhcCCCEEEEeCch------------hhcCHHHHhhcc--CCeEEE-----------CCcc--CCCCCCcc
Confidence 34568888888899999998876 348888877655 333333 3442 33345889
Q ss_pred hHHHHHHhCCcEEeccccc-ch-hhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 363 SVLEALSHGVPIIGWPLAA-EQ-FYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 363 t~~eal~~GvP~l~~P~~~-DQ-~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
.+..|+.+|....++-.+. |. .+.+..+.+. -+.+. ..-|.+.|.+++.++
T Consensus 122 pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 122 AIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQE---AVSIE----EEDTLETLTTKIQAV 174 (211)
T ss_dssp HHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 9999999999998876542 32 2222222211 12222 245777777776554
No 149
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=23.42 E-value=81 Score=30.65 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=26.7
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEeCCcchh
Q 042731 1 MAQGHIIPFLALARRLEETNKYTITLVNTPLNLK 34 (481)
Q Consensus 1 p~~GHv~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~ 34 (481)
|+.|-..-.+.+|.......|..|.|++.+...+
T Consensus 209 pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 209 PAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp TTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 6788888899999888751488999999876544
No 150
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=23.14 E-value=3.8e+02 Score=27.00 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=22.6
Q ss_pred ccceeeccCc------hhHHHHHHhCCcEEecc
Q 042731 352 VSAFLSHCGW------NSVLEALSHGVPIIGWP 378 (481)
Q Consensus 352 v~~~I~HGG~------gt~~eal~~GvP~l~~P 378 (481)
.+++++|.|- +.++||-+.++|+|++-
T Consensus 95 pgv~~~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 95 PVLLICTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 4458999996 57889999999999985
No 151
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=22.99 E-value=2.4e+02 Score=24.08 Aligned_cols=104 Identities=18% Similarity=0.202 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCch
Q 042731 283 QMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWN 362 (481)
Q Consensus 283 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~g 362 (481)
+-.++++.++..+..++++.+.. ..+|+.+.+..+ .+-+-+ |++. .=...|..
T Consensus 74 ~d~~~~~~l~~~~~Dliv~agy~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~ 126 (209)
T 4ds3_A 74 HEDAILAALDVLKPDIICLAGYM------------RLLSGRFIAPYE--GRILNI-----------HPSL--LPLFPGLH 126 (209)
T ss_dssp HHHHHHHHHHHHCCSEEEESSCC------------SCCCHHHHGGGT--TCEEEE-----------ESSC--TTSSCSSC
T ss_pred HHHHHHHHHHhcCCCEEEEeccc------------cCcCHHHHhhcc--CCeEEE-----------CCcc--ccCCCChh
Confidence 33568888888888999998876 347887766544 222223 4443 33456899
Q ss_pred hHHHHHHhCCcEEeccccc-chh-hhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 363 SVLEALSHGVPIIGWPLAA-EQF-YNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 363 t~~eal~~GvP~l~~P~~~-DQ~-~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
.+..|+.+|+...++-.+. |.. +....+.+ .-+.+. ..-|.+.|.+++.++
T Consensus 127 pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~----~~dt~~~L~~r~~~~ 179 (209)
T 4ds3_A 127 THQRALDAGMKLAGCTVHLVTEGMDEGPILAQ---AAVPVL----DGDTAETLAARVLKA 179 (209)
T ss_dssp HHHHHHHTTCSEEEEEEEECCC--CCCCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEEEEEcCCCCCCCeEEE---EEEecC----CCCCHHHHHHHHHHH
Confidence 9999999999998876542 222 21111111 112222 345777877777654
No 152
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=22.90 E-value=85 Score=31.09 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCcchhhhhhcCCCCCCeEEEEec
Q 042731 8 PFLALARRLEETNKYTITLVNTPLNLKKLKSSLPQNSSIHLLEIP 52 (481)
Q Consensus 8 P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~ 52 (481)
-++.+|+.|.+ .|.++. ++.-..+.+++ .|+.+..+.
T Consensus 36 glv~~Ak~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~ 72 (534)
T 4ehi_A 36 GIVEFGKELEN-LGFEIL--STGGTFKLLKE-----NGIKVIEVS 72 (534)
T ss_dssp THHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEECB
T ss_pred cHHHHHHHHHH-CCCEEE--EccHHHHHHHH-----CCCceeehh
Confidence 36889999999 898875 55666778888 555555554
No 153
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.80 E-value=2.9e+02 Score=25.24 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeecc
Q 042731 280 AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHC 359 (481)
Q Consensus 280 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HG 359 (481)
+.+.-.++++.++..+..++++.+.. .-+|+.+.+..+ .+-+=+ |++. .=...
T Consensus 166 r~~~~~~~~~~l~~~~~DliVlagym------------~IL~~~~l~~~~--~~~INi-----------HpSl--LP~fr 218 (302)
T 3o1l_A 166 KEPAFAEVSRLVGHHQADVVVLARYM------------QILPPQLCREYA--HQVINI-----------HHSF--LPSFV 218 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSCC------------SCCCTTHHHHTT--TCEEEE-----------ESSC--TTSSC
T ss_pred HHHHHHHHHHHHHHhCCCEEEHhHhh------------hhcCHHHHhhhh--CCeEEe-----------Cccc--ccCCC
Confidence 34445668888888889999998876 348888877654 332323 3332 33346
Q ss_pred CchhHHHHHHhCCcEEeccccc-chhh-hHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 360 GWNSVLEALSHGVPIIGWPLAA-EQFY-NSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 360 G~gt~~eal~~GvP~l~~P~~~-DQ~~-na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
|.+.+..|+.+|+...++-.+. |... -+..+.+ .-+.+. ..-|.+.|.+++.++
T Consensus 219 G~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~----~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 219 GAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQ---DVVRVS----HRDSIENMVRFGRDV 274 (302)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEE---EEEecC----CCCCHHHHHHHHHHH
Confidence 8999999999999998886542 2221 1111111 122222 345788888877665
No 154
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.79 E-value=98 Score=23.96 Aligned_cols=31 Identities=6% Similarity=-0.046 Sum_probs=20.8
Q ss_pred CccEEEeCCCCc--hHHHHHHHh---------CCceEEEech
Q 042731 104 KPLCIITDTFLG--WCKETAQEY---------GIFHAIFIGG 134 (481)
Q Consensus 104 ~pD~vI~D~~~~--~~~~~A~~l---------giP~v~~~~~ 134 (481)
+||+||.|...+ -+..+++.+ .+|.+.+...
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 899999997655 345555543 2777776653
No 155
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=22.61 E-value=2.9e+02 Score=27.60 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=21.7
Q ss_pred cceeeccCc------hhHHHHHHhCCcEEecc
Q 042731 353 SAFLSHCGW------NSVLEALSHGVPIIGWP 378 (481)
Q Consensus 353 ~~~I~HGG~------gt~~eal~~GvP~l~~P 378 (481)
+++++|.|- +.++||-+.++|+|++-
T Consensus 74 gv~~~TsGpG~~N~~~~i~~A~~~~vPll~it 105 (568)
T 2c31_A 74 GVCLTVSAPGFLNGVTSLAHATTNCFPMILLS 105 (568)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEcCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 458899986 46779999999999984
No 156
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=22.47 E-value=89 Score=29.64 Aligned_cols=27 Identities=4% Similarity=-0.100 Sum_probs=22.5
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCC
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPP 305 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~ 305 (481)
.+.+....+.+++.....+.||.+.++
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 346778889999999999999998876
No 157
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=22.34 E-value=92 Score=27.54 Aligned_cols=42 Identities=17% Similarity=0.093 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHhhccCCCCccEEEeCCC-------CchHHHHHHHhCCceEEEe
Q 042731 86 EPHFKKLISELVNEQNGQKPLCIITDTF-------LGWCKETAQEYGIFHAIFI 132 (481)
Q Consensus 86 ~~~~~~ll~~~~~~~~~~~pD~vI~D~~-------~~~~~~~A~~lgiP~v~~~ 132 (481)
.+.+.+.++++.. +||++++|.. +..|..+.-.+|+|+|-+.
T Consensus 96 ~P~ll~al~~L~~-----~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 96 LPLIIEAAKKLET-----EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHHCSS-----CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHhcCC-----CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 3555666777632 7999999943 2356677788999999754
No 158
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=22.27 E-value=48 Score=31.42 Aligned_cols=26 Identities=19% Similarity=0.265 Sum_probs=21.9
Q ss_pred ccceeeccCchhHHHHHHh----CCcEEec
Q 042731 352 VSAFLSHCGWNSVLEALSH----GVPIIGW 377 (481)
Q Consensus 352 v~~~I~HGG~gt~~eal~~----GvP~l~~ 377 (481)
++++|+=||=||++.|... ++|++++
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred CCEEEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 4459999999999999873 5898887
No 159
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.19 E-value=86 Score=25.84 Aligned_cols=24 Identities=13% Similarity=0.235 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 7 IPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
.+...|++.|++ +|.+|.|+.+|.
T Consensus 41 ~~v~el~~~L~~-~G~~V~faIHPV 64 (180)
T 1pno_A 41 HALREMADVLKK-EGVEVSYAIHPV 64 (180)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHHHH-CCCeEEEEeccc
Confidence 577889999999 999999999874
No 160
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=22.17 E-value=62 Score=25.73 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 6 IIPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 6 v~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
+.|++.+++.|.+ +|.+|+++ ...
T Consensus 30 iaPl~sm~~~l~~-~~~~v~l~-g~R 53 (142)
T 3lyu_A 30 IVEVYPIAKAWQE-IGNDVTTL-HVT 53 (142)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEE-EEE
T ss_pred HHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 5799999999999 89999998 543
No 161
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.98 E-value=3.1e+02 Score=25.36 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=24.9
Q ss_pred eEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcC
Q 042731 267 SVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRP 304 (481)
Q Consensus 267 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 304 (481)
.++++++|+.+ ....+..++++|...|.++.+++..
T Consensus 6 ~il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHG--HVYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcCH
Confidence 36777777543 2334566888888889998888753
No 162
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.98 E-value=68 Score=28.20 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=24.9
Q ss_pred HHHHHHHhhccCCCCccEEEeCCCCc--hHHHHHHHhCCceEEEe
Q 042731 90 KKLISELVNEQNGQKPLCIITDTFLG--WCKETAQEYGIFHAIFI 132 (481)
Q Consensus 90 ~~ll~~~~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~ 132 (481)
.+.|..+ +||+||...... -...--++.|||++.+.
T Consensus 52 ~E~i~~l-------~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGILAM-------KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHHTT-------CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHcc-------CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 3556677 999999886543 23344456899999864
No 163
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=21.87 E-value=47 Score=30.72 Aligned_cols=22 Identities=9% Similarity=0.016 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCc
Q 042731 9 FLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 9 ~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
-.+||+++.+ +|++|+|++.+.
T Consensus 68 G~aiAe~~~~-~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLA-AGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHH-TTCEEEEEEETT
T ss_pred HHHHHHHHHH-CCCEEEEEecCC
Confidence 3578999999 999999999763
No 164
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=21.50 E-value=3.2e+02 Score=23.70 Aligned_cols=103 Identities=19% Similarity=0.210 Sum_probs=63.6
Q ss_pred HHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchh
Q 042731 284 MMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNS 363 (481)
Q Consensus 284 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt 363 (481)
-.++++.++..+..++++.+.. .-+|+.+.+..+ .+-+-+ |++. .=...|...
T Consensus 90 ~~~~~~~l~~~~~Dliv~agy~------------~IL~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 142 (229)
T 3auf_A 90 DAALAERLQAYGVDLVCLAGYM------------RLVRGPMLTAFP--NRILNI-----------HPSL--LPAFPGLEA 142 (229)
T ss_dssp HHHHHHHHHHTTCSEEEESSCC------------SCCCHHHHHHST--TCEEEE-----------ESSC--TTSSCSSCH
T ss_pred cHHHHHHHHhcCCCEEEEcChh------------HhCCHHHHhhcc--CCEEEE-----------ccCc--CcCCCCcCH
Confidence 3558888888888999998876 347888776654 222333 3442 333458999
Q ss_pred HHHHHHhCCcEEeccccc-c-hhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 364 VLEALSHGVPIIGWPLAA-E-QFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 364 ~~eal~~GvP~l~~P~~~-D-Q~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
+..|+.+|....++-.+. | ..+....+.+. -+.+. ..-|.+.|.+++.++
T Consensus 143 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 194 (229)
T 3auf_A 143 QRQALEHGVKVAGCTVHFVTAGVDEGPIILQA---AVPVL----EGDTVEDLRRRILAE 194 (229)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEECCCCcCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 999999999998876542 3 22222222211 12222 345777777777554
No 165
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=21.49 E-value=90 Score=25.82 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCc
Q 042731 7 IPFLALARRLEETNKYTITLVNTPL 31 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~ 31 (481)
.+...|++.|++ +|.+|.|+.+|.
T Consensus 40 ~~v~el~~~L~~-~G~~V~faIHPV 63 (184)
T 1d4o_A 40 YPIADLVKMLSE-QGKKVRFGIHPV 63 (184)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHHHH-CCCeEEEEeccc
Confidence 577889999999 999999999873
No 166
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=21.42 E-value=72 Score=26.61 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCcchhhhhh
Q 042731 7 IPFLALARRLEETNKYTITLVNTPLNLKKLKS 38 (481)
Q Consensus 7 ~P~l~LA~~L~~~~Gh~Vt~~~~~~~~~~i~~ 38 (481)
+-.+.|.+.|++ .|++|.++.++.-.+++..
T Consensus 19 ~k~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 19 INISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp GGHHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred HHHHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 346789999999 9999999999887766654
No 167
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=21.04 E-value=2.7e+02 Score=26.22 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=26.3
Q ss_pred EEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCC
Q 042731 268 VLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPP 305 (481)
Q Consensus 268 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 305 (481)
+++++.||.+ .-.-+..++.+|...|.++.+.+...
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~~ 38 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPPD 38 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECGG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 6778888764 22335568899999999999887643
No 168
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=20.93 E-value=78 Score=29.07 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=24.8
Q ss_pred HHHHHHHhhccCCCCccEEEeCCCCc-hHHHHHHHhCCceEEEec
Q 042731 90 KKLISELVNEQNGQKPLCIITDTFLG-WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 90 ~~ll~~~~~~~~~~~pD~vI~D~~~~-~~~~~A~~lgiP~v~~~~ 133 (481)
.+.|-.+ +||+||...... ....--++.|||++.+..
T Consensus 77 ~E~i~~l-------~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 77 IESLLAL-------KPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHHHHT-------CCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HHHHHcc-------CCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 3566677 999999875432 223344567999998653
No 169
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.92 E-value=3.7e+02 Score=22.45 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=64.0
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeec
Q 042731 279 IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSH 358 (481)
Q Consensus 279 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~H 358 (481)
..++.+.++++..+..+.++|++..+.. +.||.-+...+. .-|+-++ .+.+ +-
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~a-----------a~LpgvvA~~t~---~PVIgVP----------~~~~---~l 104 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGGA-----------AHLPGMVASITH---LPVIGVP----------VKTS---TL 104 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEESS-----------CCHHHHHHHHCS---SCEEEEE----------ECCT---TT
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCcc-----------cccHHHHHhccC---CCEEEee----------CCCC---CC
Confidence 4577788888877777888888776553 457655444332 1122111 0111 34
Q ss_pred cCchhHHHHHHh--CCcEEecccccchhhhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhc
Q 042731 359 CGWNSVLEALSH--GVPIIGWPLAAEQFYNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMN 422 (481)
Q Consensus 359 GG~gt~~eal~~--GvP~l~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~ 422 (481)
+|..+++..+.. |+|+-+ ...|-.+||+.++..+ -.++...|.++++.--.
T Consensus 105 ~G~dsLlSivqmP~GvpVat--V~Id~~~nAa~lAaqI-----------la~~d~~l~~kL~~~r~ 157 (183)
T 1o4v_A 105 NGLDSLFSIVQMPGGVPVAT--VAINNAKNAGILAASI-----------LGIKYPEIARKVKEYKE 157 (183)
T ss_dssp TTHHHHHHHHTCCTTCCCEE--CCTTCHHHHHHHHHHH-----------HHTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHhcCCCCCeeEE--EecCCchHHHHHHHHH-----------HhcCCHHHHHHHHHHHH
Confidence 678888888888 999433 3457899999888441 13455677777765543
No 170
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.61 E-value=2.3e+02 Score=19.90 Aligned_cols=48 Identities=19% Similarity=0.329 Sum_probs=33.3
Q ss_pred hCCcEEecccccchhhhH---HHHHHHhcceEEeeccCCcccCHHHHHHHHHHHhc
Q 042731 370 HGVPIIGWPLAAEQFYNS---KLLEEEMGVCVEIARGMSCEVLKEDLSAKIELVMN 422 (481)
Q Consensus 370 ~GvP~l~~P~~~DQ~~na---~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~vl~ 422 (481)
+|+|++++--...|...- ...... |+...+-+ ...+++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 589998887766554422 223334 77777765 6688999999988874
No 171
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=20.49 E-value=1.4e+02 Score=28.20 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=18.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeCC
Q 042731 9 FLALARRLEETNKYTITLVNTP 30 (481)
Q Consensus 9 ~l~LA~~L~~~~Gh~Vt~~~~~ 30 (481)
.+.+++.+++ .|++|+++..+
T Consensus 19 ~~~~~~a~~~-~G~~~v~v~~~ 39 (403)
T 4dim_A 19 QLGLYKAAKE-LGIHTIAGTMP 39 (403)
T ss_dssp GHHHHHHHHH-HTCEEEEEECS
T ss_pred HHHHHHHHHH-CCCEEEEEcCC
Confidence 4678999999 89999999764
No 172
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=20.43 E-value=4.7e+02 Score=23.54 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=11.8
Q ss_pred HHHHHHhcCCceEEEEcC
Q 042731 287 LAMALEASGKNFIWVVRP 304 (481)
Q Consensus 287 ~~~al~~~~~~~i~~~~~ 304 (481)
++.+++..+..++++.+-
T Consensus 126 LLr~va~~gkPVilK~G~ 143 (285)
T 3sz8_A 126 LVVAIAKAGKPVNVKKPQ 143 (285)
T ss_dssp HHHHHHHTSSCEEEECCT
T ss_pred HHHHHHccCCcEEEeCCC
Confidence 555566677777777664
No 173
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=20.40 E-value=2.8e+02 Score=25.05 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCc
Q 042731 282 SQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGW 361 (481)
Q Consensus 282 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~ 361 (481)
++-.++++.++..+..+++..+.. .-+|+.+....+ .+-+=+ |++. .=...|.
T Consensus 152 ~~~~~~~~~l~~~~~Dlivlagym------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~~rG~ 204 (287)
T 3nrb_A 152 AQESQIKNIVTQSQADLIVLARYM------------QILSDDLSAFLS--GRCINI-----------HHSF--LPGFKGA 204 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSCC------------SCCCHHHHHHHT--TSEEEE-----------ESSC--TTTTCSS
T ss_pred hHHHHHHHHHHHhCCCEEEhhhhh------------hhcCHHHHhhcc--CCeEEE-----------Cccc--ccCCCCc
Confidence 334568888888888999998876 348888877665 333333 3332 2334689
Q ss_pred hhHHHHHHhCCcEEeccccc-chhh-hHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 362 NSVLEALSHGVPIIGWPLAA-EQFY-NSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 362 gt~~eal~~GvP~l~~P~~~-DQ~~-na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
+.+..|+.+|+...++-.+. |... -+..+.+ .-+.+. ..-|.+.|.+++.++
T Consensus 205 ~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~----~~dt~~~L~~r~~~~ 258 (287)
T 3nrb_A 205 KPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQ---DVEHVS----HRDSAEDLVRKGRDI 258 (287)
T ss_dssp CHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE---EEEecC----CCCCHHHHHHHHHHH
Confidence 99999999999998886542 2221 1111111 122222 345788888777665
No 174
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=20.26 E-value=3.1e+02 Score=23.38 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=62.8
Q ss_pred HHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchh
Q 042731 284 MMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNS 363 (481)
Q Consensus 284 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt 363 (481)
-.++++.++..+..++++.+.. .-+|+.+.+..+ .+-+-+ |++. .=...|...
T Consensus 68 ~~~~~~~l~~~~~Dliv~agy~------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~yrG~~p 120 (212)
T 1jkx_A 68 DRELIHEIDMYAPDVVVLAGFM------------RILSPAFVSHYA--GRLLNI-----------HPSL--LPKYPGLHT 120 (212)
T ss_dssp HHHHHHHHGGGCCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------ESSC--TTSCCSSCH
T ss_pred cHHHHHHHHhcCCCEEEEeChh------------hhCCHHHHhhcc--CCEEEE-----------ccCc--ccCCCCccH
Confidence 3457888888888888888876 337888776654 333333 4443 333468999
Q ss_pred HHHHHHhCCcEEeccccc-chh-hhHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 364 VLEALSHGVPIIGWPLAA-EQF-YNSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 364 ~~eal~~GvP~l~~P~~~-DQ~-~na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
+..|+.+|....++-.+. |.. .....+.+. -+.+. ..-|.+.|.+++.++
T Consensus 121 i~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 172 (212)
T 1jkx_A 121 HRQALENGDEEHGTSVHFVTDELDGGPVILQA---KVPVF----AGDSEDDITARVQTQ 172 (212)
T ss_dssp HHHHHHTTCSEEEEEEEECCSSTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCceEEEEEEEcccccCCCEEEEE---EEEcC----CCCCHHHHHHHHHHH
Confidence 999999999998876542 322 222222211 12222 345777777776554
No 175
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=20.13 E-value=2.3e+02 Score=26.21 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=26.4
Q ss_pred CCeEEEEEcccccccCHH-HHHHHHHHHHhcCCceEEEEcC
Q 042731 265 YTSVLYVSFGSQNTIAAS-QMMQLAMALEASGKNFIWVVRP 304 (481)
Q Consensus 265 ~~~~V~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~i~~~~~ 304 (481)
.+++++++ |-.....++ +..++++-+.+.+.+-++.++.
T Consensus 104 ~~~~llL~-G~eP~~~w~~f~~avl~~a~~~gV~~vv~Lgg 143 (325)
T 3e35_A 104 GAPFLFLS-GPEPDVEWERFAAAVGQIVERLGVRLSVSFHG 143 (325)
T ss_dssp CCEEEEEE-EECCSSCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCcEEEEE-CCCCcchHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 35566555 665566664 5566888888899988876643
No 176
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=20.11 E-value=3.7e+02 Score=24.29 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=16.1
Q ss_pred HHHHHHHHhCCCCEEEEEeC
Q 042731 10 LALARRLEETNKYTITLVNT 29 (481)
Q Consensus 10 l~LA~~L~~~~Gh~Vt~~~~ 29 (481)
..|++.|.+ +||+|+.+.-
T Consensus 16 ~~l~~~L~~-~g~~V~~~~r 34 (348)
T 1ek6_A 16 SHTVLELLE-AGYLPVVIDN 34 (348)
T ss_dssp HHHHHHHHH-TTCCEEEEEC
T ss_pred HHHHHHHHH-CCCEEEEEec
Confidence 468899999 9999999863
No 177
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=20.10 E-value=3.5e+02 Score=23.22 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCCcEEEecccCHHHhhcccCccceeeccCchh
Q 042731 284 MMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQGLVVHKWAPQVEILSHRSVSAFLSHCGWNS 363 (481)
Q Consensus 284 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt 363 (481)
-.++++.++..+..++++.+.. ..+|+.+.+..+ .+-+-+ |++. .=...|...
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 124 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFM------------RKLGKAFVSHYS--GRMINI-----------HPSL--LPKYTGLNT 124 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------ESSS--TTTTCSSCH
T ss_pred HHHHHHHHHhcCCCEEEEccch------------hhCCHHHHhhcc--CCeEEe-----------Cccc--CCCCCChhH
Confidence 3568888888888999888876 347888776654 222223 3442 233468999
Q ss_pred HHHHHHhCCcEEeccccc-chhh-hHHHHHHHhcceEEeeccCCcccCHHHHHHHHHHH
Q 042731 364 VLEALSHGVPIIGWPLAA-EQFY-NSKLLEEEMGVCVEIARGMSCEVLKEDLSAKIELV 420 (481)
Q Consensus 364 ~~eal~~GvP~l~~P~~~-DQ~~-na~~v~~~lG~G~~~~~~~~~~~~~~~l~~~i~~v 420 (481)
+..|+.+|....++-.+. |... ....+.+ .-+.+. ..-|.+.|.+++.++
T Consensus 125 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~----~~dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 125 HERALAAGETEHGVSVHYVTEDLDAGPLICQ---ARLSIT----PQDTPETLKTRVHAL 176 (215)
T ss_dssp HHHHHHTTCSEEEEEEEECC-CTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEEecC----CCCCHHHHHHHHHHH
Confidence 999999999998876542 3222 1111111 122222 345777777777654
No 178
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=20.08 E-value=66 Score=28.34 Aligned_cols=37 Identities=8% Similarity=0.075 Sum_probs=24.5
Q ss_pred HHHHHHHhhccCCCCccEEEeCCCCc-hHHHHHHHhCCceEEEec
Q 042731 90 KKLISELVNEQNGQKPLCIITDTFLG-WCKETAQEYGIFHAIFIG 133 (481)
Q Consensus 90 ~~ll~~~~~~~~~~~pD~vI~D~~~~-~~~~~A~~lgiP~v~~~~ 133 (481)
.+.|..+ +||+||...... .....-+++|||++.+..
T Consensus 53 ~E~i~~l-------~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 53 VEAVKKL-------KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHHHT-------CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHHHhc-------CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 3556677 999999864322 223445668999988654
No 179
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.05 E-value=2e+02 Score=27.30 Aligned_cols=98 Identities=22% Similarity=0.144 Sum_probs=0.0
Q ss_pred hhhhhhhcCCCCCeEEEEEcccccccCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCcchhhhcCCCchhHHHHhccCCC
Q 042731 254 ELCKKWLDTKPYTSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKANKWLPRGFEERIKCSGQ 333 (481)
Q Consensus 254 ~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 333 (481)
..+.+++...+.+.++.|+-+++. .......+.+.|+..+..+.+..+... +.-.+.+.+-.+
T Consensus 20 ~~l~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~~~~v~~-----------~p~~~~v~~~~~---- 82 (383)
T 3ox4_A 20 EKAIKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAVYDGVMP-----------NPTVTAVLEGLK---- 82 (383)
T ss_dssp HHHHHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEEEEEECS-----------SCBHHHHHHHHH----
T ss_pred HHHHHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEEECCccC-----------CCCHHHHHHHHH----
Q ss_pred cEEEecccCHHHhhcccCccceeeccCchhHHHHHHh-----------------------CCcEEeccccc
Q 042731 334 GLVVHKWAPQVEILSHRSVSAFLSHCGWNSVLEALSH-----------------------GVPIIGWPLAA 381 (481)
Q Consensus 334 ~~~v~~~ip~~~ll~~~~v~~~I~HGG~gt~~eal~~-----------------------GvP~l~~P~~~ 381 (481)
.+....++++|.=|| ||+..+..+ |+|++.+|...
T Consensus 83 ------------~~~~~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 83 ------------ILKDNNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp ------------HHHHHTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSS
T ss_pred ------------HHHhcCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCC
No 180
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=20.04 E-value=24 Score=18.59 Aligned_cols=17 Identities=35% Similarity=0.661 Sum_probs=13.8
Q ss_pred CchhHHHHHHhCCcEEe
Q 042731 360 GWNSVLEALSHGVPIIG 376 (481)
Q Consensus 360 G~gt~~eal~~GvP~l~ 376 (481)
|.|++...|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999888765
Done!