Query 042735
Match_columns 667
No_of_seqs 507 out of 4714
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 08:55:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042735.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042735hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.2E-71 4.9E-76 660.2 50.6 634 1-660 234-953 (968)
2 KOG1187 Serine/threonine prote 100.0 2.5E-45 5.5E-50 380.7 20.7 247 408-658 62-352 (361)
3 KOG0581 Mitogen-activated prot 100.0 7.9E-42 1.7E-46 333.8 16.1 229 422-660 80-341 (364)
4 KOG0192 Tyrosine kinase specif 100.0 5.1E-41 1.1E-45 345.6 22.1 228 424-663 44-308 (362)
5 KOG0615 Serine/threonine prote 100.0 1.9E-40 4.1E-45 325.9 11.8 231 421-659 172-442 (475)
6 KOG0197 Tyrosine kinases [Sign 100.0 2.4E-39 5.1E-44 331.3 14.1 213 425-657 210-460 (468)
7 KOG0598 Ribosomal protein S6 k 100.0 4.1E-39 8.9E-44 314.8 13.7 232 420-663 24-290 (357)
8 KOG0575 Polo-like serine/threo 100.0 1.2E-38 2.5E-43 329.2 15.5 230 421-663 18-278 (592)
9 KOG0591 NIMA (never in mitosis 100.0 6.6E-40 1.4E-44 306.5 4.1 222 421-654 19-281 (375)
10 KOG0595 Serine/threonine-prote 100.0 3.1E-38 6.7E-43 311.0 15.8 171 419-592 8-215 (429)
11 PLN00113 leucine-rich repeat r 100.0 1E-36 2.2E-41 363.2 22.6 305 2-308 117-446 (968)
12 KOG0201 Serine/threonine prote 100.0 3.1E-37 6.7E-42 306.2 10.4 223 422-658 14-267 (467)
13 KOG1026 Nerve growth factor re 100.0 1E-36 2.3E-41 326.8 13.1 226 421-661 486-765 (774)
14 KOG0582 Ste20-like serine/thre 100.0 4.2E-36 9.2E-41 298.1 16.2 232 421-661 26-300 (516)
15 KOG0578 p21-activated serine/t 100.0 9.2E-37 2E-41 312.7 10.9 227 421-660 273-529 (550)
16 KOG0605 NDR and related serine 100.0 2.2E-36 4.7E-41 307.5 12.9 236 419-664 139-455 (550)
17 KOG0198 MEKK and related serin 100.0 6.3E-36 1.4E-40 298.3 13.0 227 421-660 17-282 (313)
18 KOG0694 Serine/threonine prote 100.0 4.2E-36 9E-41 313.8 11.5 233 419-664 366-634 (694)
19 KOG0597 Serine-threonine prote 100.0 2.2E-36 4.7E-41 307.0 8.4 229 421-665 2-262 (808)
20 KOG4721 Serine/threonine prote 100.0 8.1E-36 1.8E-40 302.5 12.5 220 409-658 119-368 (904)
21 KOG0592 3-phosphoinositide-dep 100.0 8.6E-36 1.9E-40 302.7 12.6 233 418-663 70-347 (604)
22 KOG0593 Predicted protein kina 100.0 4.8E-36 1E-40 283.5 8.7 236 421-658 2-288 (396)
23 KOG0574 STE20-like serine/thre 100.0 1.5E-36 3.3E-41 285.8 2.9 221 423-658 35-287 (502)
24 PHA02988 hypothetical protein; 100.0 7E-34 1.5E-38 290.2 22.6 223 424-661 23-282 (283)
25 KOG1095 Protein tyrosine kinas 100.0 1.8E-34 3.9E-39 320.8 17.9 223 423-659 694-962 (1025)
26 KOG0616 cAMP-dependent protein 100.0 6.9E-35 1.5E-39 275.2 11.9 226 420-663 43-306 (355)
27 KOG0580 Serine/threonine prote 100.0 4.1E-35 8.9E-40 269.0 9.8 225 419-658 20-277 (281)
28 KOG0583 Serine/threonine prote 100.0 1E-33 2.2E-38 294.6 18.4 228 419-659 15-280 (370)
29 KOG0196 Tyrosine kinase, EPH ( 100.0 9.9E-35 2.1E-39 305.2 9.7 237 407-657 606-890 (996)
30 KOG0193 Serine/threonine prote 100.0 5E-34 1.1E-38 293.4 14.2 227 422-660 393-655 (678)
31 KOG0194 Protein tyrosine kinas 100.0 7.4E-34 1.6E-38 296.0 14.9 228 424-662 160-424 (474)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.7E-33 7.9E-38 292.9 20.0 225 421-658 7-334 (338)
33 KOG0599 Phosphorylase kinase g 100.0 5E-34 1.1E-38 265.7 11.6 238 415-661 11-290 (411)
34 KOG4278 Protein tyrosine kinas 100.0 5.9E-34 1.3E-38 291.3 10.4 220 421-658 267-523 (1157)
35 KOG0600 Cdc2-related protein k 100.0 1.8E-33 4E-38 283.6 13.3 238 421-661 117-407 (560)
36 PLN00034 mitogen-activated pro 100.0 6.9E-33 1.5E-37 292.3 18.2 229 421-660 74-334 (353)
37 KOG4194 Membrane glycoprotein 100.0 1.8E-34 4E-39 293.9 4.3 317 1-319 100-421 (873)
38 cd06649 PKc_MEK2 Catalytic dom 100.0 3.1E-32 6.8E-37 284.6 21.1 233 421-660 5-307 (331)
39 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-32 3.8E-37 280.4 18.3 231 423-663 2-270 (285)
40 cd05571 STKc_PKB Catalytic dom 100.0 5.2E-33 1.1E-37 289.5 14.6 222 427-661 1-258 (323)
41 KOG1094 Discoidin domain recep 100.0 5.2E-33 1.1E-37 283.4 13.5 228 422-657 539-803 (807)
42 KOG0588 Serine/threonine prote 100.0 2.4E-33 5.2E-38 290.7 11.2 225 421-661 12-270 (786)
43 cd05584 STKc_p70S6K Catalytic 100.0 7.2E-33 1.6E-37 288.4 14.9 221 427-661 2-263 (323)
44 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.9E-33 1.5E-37 290.0 14.5 232 421-661 1-264 (333)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 4.3E-32 9.4E-37 280.3 20.3 227 421-656 5-303 (304)
46 PTZ00263 protein kinase A cata 100.0 5.5E-33 1.2E-37 290.0 13.1 228 420-663 17-280 (329)
47 KOG0589 Serine/threonine prote 100.0 4.3E-33 9.3E-38 284.7 11.8 224 420-656 3-260 (426)
48 cd05104 PTKc_Kit Catalytic dom 100.0 4.4E-32 9.4E-37 288.0 19.9 224 421-657 35-373 (375)
49 cd05612 STKc_PRKX_like Catalyt 100.0 5.3E-33 1.1E-37 285.1 11.9 227 421-663 1-263 (291)
50 PTZ00426 cAMP-dependent protei 100.0 8.3E-33 1.8E-37 289.3 13.3 227 420-662 29-292 (340)
51 KOG0577 Serine/threonine prote 100.0 1.9E-33 4.1E-38 286.5 7.9 219 423-657 28-281 (948)
52 KOG0579 Ste20-like serine/thre 100.0 6.6E-34 1.4E-38 291.4 4.4 225 423-660 34-295 (1187)
53 cd05585 STKc_YPK1_like Catalyt 100.0 5.4E-33 1.2E-37 288.0 11.1 220 429-661 1-254 (312)
54 cd05626 STKc_LATS2 Catalytic d 100.0 1.7E-32 3.7E-37 292.2 15.2 232 422-663 2-314 (381)
55 cd05593 STKc_PKB_gamma Catalyt 100.0 2.6E-32 5.7E-37 284.6 16.2 223 427-662 1-259 (328)
56 cd06650 PKc_MEK1 Catalytic dom 100.0 7.7E-32 1.7E-36 281.7 19.5 233 421-660 5-305 (333)
57 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-32 4E-37 286.7 14.7 232 422-661 1-274 (332)
58 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.2E-32 6.8E-37 281.2 16.2 237 420-660 4-294 (303)
59 KOG0611 Predicted serine/threo 100.0 1E-32 2.2E-37 269.7 11.5 221 422-658 54-307 (668)
60 cd05595 STKc_PKB_beta Catalyti 100.0 3E-32 6.4E-37 283.7 15.8 223 427-662 1-259 (323)
61 KOG0585 Ca2+/calmodulin-depend 100.0 9.9E-33 2.2E-37 275.8 11.3 232 418-660 94-378 (576)
62 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-32 3.1E-37 291.1 13.3 236 419-663 41-313 (370)
63 cd05106 PTKc_CSF-1R Catalytic 100.0 6.1E-32 1.3E-36 286.6 18.0 225 421-658 38-372 (374)
64 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.9E-31 4E-36 268.4 19.9 219 421-655 4-255 (256)
65 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.5E-32 1.4E-36 276.7 16.8 234 420-657 4-288 (288)
66 KOG4257 Focal adhesion tyrosin 100.0 5.2E-32 1.1E-36 277.6 15.5 221 423-659 391-650 (974)
67 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-32 1.6E-36 285.5 16.7 234 421-663 1-302 (363)
68 cd05618 STKc_aPKC_iota Catalyt 100.0 4.8E-32 1E-36 282.8 14.9 229 427-662 1-270 (329)
69 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-32 8.8E-37 283.0 14.0 225 423-660 1-263 (324)
70 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-31 3.7E-36 272.4 18.1 225 429-662 1-265 (280)
71 KOG0659 Cdk activating kinase 100.0 9.8E-32 2.1E-36 250.3 14.6 235 422-659 3-286 (318)
72 cd05588 STKc_aPKC Catalytic do 100.0 6.2E-32 1.3E-36 282.1 15.0 229 427-662 1-270 (329)
73 cd07848 STKc_CDKL5 Catalytic d 100.0 4.5E-32 9.8E-37 277.8 13.4 235 421-657 1-287 (287)
74 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.1E-31 8.9E-36 281.4 21.0 224 421-657 37-396 (400)
75 cd06646 STKc_MAP4K5 Catalytic 100.0 2.3E-31 4.9E-36 269.6 18.2 226 420-656 8-267 (267)
76 KOG0661 MAPK related serine/th 100.0 1.3E-32 2.9E-37 275.4 8.9 237 420-661 9-298 (538)
77 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.7E-32 2.1E-36 282.2 15.7 237 422-661 1-297 (338)
78 cd05048 PTKc_Ror Catalytic Dom 100.0 5.5E-31 1.2E-35 269.2 20.7 222 421-656 5-281 (283)
79 PTZ00267 NIMA-related protein 100.0 3.1E-31 6.7E-36 290.0 20.0 222 422-658 68-327 (478)
80 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.6E-31 1.2E-35 266.5 20.3 223 421-657 5-264 (266)
81 cd05590 STKc_nPKC_eta Catalyti 100.0 6.6E-32 1.4E-36 280.7 13.7 223 427-662 1-261 (320)
82 KOG4279 Serine/threonine prote 100.0 1.2E-32 2.5E-37 285.2 7.8 219 427-658 581-836 (1226)
83 PHA03212 serine/threonine kina 100.0 3.6E-31 7.9E-36 281.7 19.4 236 421-667 92-389 (391)
84 cd05594 STKc_PKB_alpha Catalyt 100.0 4.9E-32 1.1E-36 282.5 12.5 223 427-662 1-260 (325)
85 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-31 2.5E-36 270.3 14.5 217 425-655 3-259 (259)
86 cd05591 STKc_nPKC_epsilon Cata 100.0 8.9E-32 1.9E-36 280.0 14.1 223 427-662 1-262 (321)
87 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-32 1E-36 287.5 11.9 232 421-662 1-304 (364)
88 cd05625 STKc_LATS1 Catalytic d 100.0 8.8E-32 1.9E-36 287.1 13.4 232 422-663 2-314 (382)
89 cd05575 STKc_SGK Catalytic dom 100.0 3.6E-32 7.9E-37 283.2 10.2 222 427-661 1-258 (323)
90 cd05587 STKc_cPKC Catalytic do 100.0 2E-31 4.3E-36 277.8 15.7 228 422-662 1-265 (324)
91 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-31 2.5E-36 278.4 13.7 222 427-661 1-255 (316)
92 KOG0032 Ca2+/calmodulin-depend 100.0 3.6E-31 7.9E-36 275.1 17.3 230 421-660 35-299 (382)
93 cd08529 STKc_FA2-like Catalyti 100.0 8.2E-31 1.8E-35 263.6 19.5 222 422-656 1-255 (256)
94 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-32 6.9E-37 287.3 9.6 232 421-663 1-294 (350)
95 cd05616 STKc_cPKC_beta Catalyt 100.0 2.2E-31 4.8E-36 277.3 15.6 225 422-661 1-264 (323)
96 cd05621 STKc_ROCK2 Catalytic d 100.0 8.1E-32 1.7E-36 285.1 12.4 233 420-661 42-311 (370)
97 cd06624 STKc_ASK Catalytic dom 100.0 6.8E-31 1.5E-35 266.2 18.7 228 417-657 4-268 (268)
98 cd06638 STKc_myosinIIIA Cataly 100.0 2.6E-31 5.7E-36 272.0 15.7 231 413-657 10-286 (286)
99 cd08228 STKc_Nek6 Catalytic do 100.0 1E-30 2.2E-35 264.7 19.7 229 421-658 2-265 (267)
100 cd05090 PTKc_Ror1 Catalytic do 100.0 8.9E-31 1.9E-35 267.6 19.3 222 421-656 5-281 (283)
101 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7E-31 1.5E-35 266.3 18.4 219 428-656 2-268 (269)
102 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.6E-31 1.2E-35 266.8 17.3 219 428-656 2-267 (268)
103 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-30 2.8E-35 263.0 19.9 220 421-656 6-259 (261)
104 cd05605 STKc_GRK4_like Catalyt 100.0 4.1E-31 9E-36 270.3 16.4 232 422-663 1-270 (285)
105 PTZ00283 serine/threonine prot 100.0 8.3E-31 1.8E-35 286.7 19.8 227 419-658 30-301 (496)
106 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-31 5.5E-36 276.2 14.9 223 427-662 1-260 (318)
107 KOG0596 Dual specificity; seri 100.0 6.4E-32 1.4E-36 274.5 9.9 221 422-658 362-631 (677)
108 cd05619 STKc_nPKC_theta Cataly 100.0 3.5E-31 7.6E-36 274.6 15.8 223 427-662 1-256 (316)
109 cd05582 STKc_RSK_N N-terminal 100.0 7.1E-32 1.5E-36 280.5 10.6 221 427-661 2-261 (318)
110 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.6E-31 9.9E-36 275.3 16.5 228 427-662 1-268 (327)
111 cd05108 PTKc_EGFR Catalytic do 100.0 1.8E-30 3.8E-35 269.8 20.9 223 421-658 7-268 (316)
112 cd06654 STKc_PAK1 Catalytic do 100.0 9.3E-31 2E-35 269.2 18.6 226 421-659 20-275 (296)
113 cd05033 PTKc_EphR Catalytic do 100.0 3.1E-30 6.7E-35 261.1 22.1 223 421-657 4-264 (266)
114 KOG0663 Protein kinase PITSLRE 100.0 1.5E-31 3.3E-36 256.4 11.7 237 420-659 75-366 (419)
115 cd05059 PTKc_Tec_like Catalyti 100.0 1.3E-30 2.9E-35 262.2 19.2 218 422-655 5-255 (256)
116 KOG4194 Membrane glycoprotein 100.0 1.3E-32 2.7E-37 280.6 4.4 303 5-308 80-383 (873)
117 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.9E-30 4.2E-35 276.1 21.4 224 421-657 37-398 (401)
118 cd05598 STKc_LATS Catalytic do 100.0 8.1E-32 1.8E-36 286.8 10.8 232 421-662 1-309 (376)
119 cd05049 PTKc_Trk Catalytic dom 100.0 1.6E-30 3.5E-35 265.2 19.8 222 421-656 5-279 (280)
120 cd05603 STKc_SGK2 Catalytic do 100.0 6.7E-32 1.4E-36 281.1 9.8 221 427-660 1-257 (321)
121 cd06637 STKc_TNIK Catalytic do 100.0 3.4E-31 7.4E-36 269.0 14.7 224 419-657 4-272 (272)
122 KOG0983 Mitogen-activated prot 100.0 7.5E-32 1.6E-36 251.5 8.8 223 424-658 95-353 (391)
123 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-30 4.6E-35 261.7 20.0 227 421-657 2-263 (263)
124 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.7E-30 3.7E-35 261.4 19.2 219 421-655 4-255 (256)
125 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-31 8.8E-36 274.3 15.1 223 427-662 1-256 (316)
126 cd07862 STKc_CDK6 Catalytic do 100.0 6.8E-31 1.5E-35 269.5 16.5 232 422-657 2-290 (290)
127 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-31 3.5E-36 284.5 12.2 232 421-662 1-313 (377)
128 cd06612 STKc_MST1_2 Catalytic 100.0 9.5E-31 2.1E-35 263.1 17.1 222 421-657 3-256 (256)
129 KOG0610 Putative serine/threon 100.0 5E-31 1.1E-35 260.1 14.5 230 421-663 77-401 (459)
130 cd05622 STKc_ROCK1 Catalytic d 100.0 2.6E-31 5.6E-36 281.5 13.3 235 418-661 40-311 (371)
131 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-30 3.1E-35 262.7 18.1 223 420-657 5-260 (261)
132 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-30 4.5E-35 263.6 19.3 226 422-660 2-257 (274)
133 cd06640 STKc_MST4 Catalytic do 100.0 3.2E-30 6.8E-35 262.7 20.7 227 422-662 5-261 (277)
134 cd06655 STKc_PAK2 Catalytic do 100.0 1.1E-30 2.3E-35 268.7 17.2 226 421-659 19-274 (296)
135 cd06631 STKc_YSK4 Catalytic do 100.0 2.4E-30 5.2E-35 261.7 19.5 227 422-657 1-265 (265)
136 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-30 2.6E-35 265.7 17.3 225 429-662 1-262 (277)
137 cd05093 PTKc_TrkB Catalytic do 100.0 3.9E-30 8.4E-35 263.6 21.0 226 421-661 5-282 (288)
138 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-31 2.4E-36 280.6 9.7 232 421-662 1-271 (330)
139 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.8E-30 1E-34 259.7 21.3 229 421-658 2-265 (267)
140 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-30 2.5E-35 266.0 16.7 224 423-660 6-259 (277)
141 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-30 2.9E-35 268.1 17.4 227 421-660 19-275 (297)
142 cd06615 PKc_MEK Catalytic doma 100.0 3.4E-30 7.3E-35 266.6 20.2 232 421-660 1-293 (308)
143 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-31 2.4E-36 279.8 9.2 221 427-660 1-257 (325)
144 cd06619 PKc_MKK5 Catalytic dom 100.0 2.4E-30 5.1E-35 263.9 18.7 229 422-660 2-259 (279)
145 cd05062 PTKc_IGF-1R Catalytic 100.0 4.4E-30 9.6E-35 261.6 20.6 223 420-656 5-276 (277)
146 cd05068 PTKc_Frk_like Catalyti 100.0 4.6E-30 1E-34 259.0 20.5 221 421-657 6-260 (261)
147 cd06639 STKc_myosinIIIB Cataly 100.0 1.1E-30 2.5E-35 267.9 16.1 233 411-657 12-290 (291)
148 cd05089 PTKc_Tie1 Catalytic do 100.0 6.4E-30 1.4E-34 263.2 21.6 227 421-662 2-279 (297)
149 PRK13184 pknD serine/threonine 100.0 2.1E-30 4.6E-35 290.8 19.4 227 421-657 2-289 (932)
150 KOG1006 Mitogen-activated prot 100.0 6.6E-33 1.4E-37 257.6 -0.6 223 426-658 69-331 (361)
151 cd05054 PTKc_VEGFR Catalytic d 100.0 3.8E-30 8.1E-35 269.2 20.0 225 421-658 7-333 (337)
152 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-31 2.8E-36 279.3 8.9 221 427-660 1-257 (325)
153 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-30 7E-35 264.7 19.0 227 421-660 12-275 (292)
154 cd05111 PTK_HER3 Pseudokinase 100.0 7.8E-30 1.7E-34 260.0 21.6 223 421-658 7-268 (279)
155 KOG0033 Ca2+/calmodulin-depend 100.0 2.1E-32 4.5E-37 251.3 2.2 227 421-658 11-271 (355)
156 cd05627 STKc_NDR2 Catalytic do 100.0 2.6E-31 5.6E-36 281.1 10.9 233 421-663 1-302 (360)
157 cd08229 STKc_Nek7 Catalytic do 100.0 2.6E-30 5.7E-35 261.7 17.9 228 421-657 2-264 (267)
158 cd05042 PTKc_Aatyk Catalytic d 100.0 2.2E-30 4.8E-35 262.6 17.2 219 428-656 2-268 (269)
159 cd05085 PTKc_Fer Catalytic dom 100.0 1E-29 2.3E-34 254.7 21.8 215 428-656 2-249 (250)
160 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-30 3.3E-35 269.4 16.1 235 421-659 6-291 (309)
161 cd05094 PTKc_TrkC Catalytic do 100.0 6.9E-30 1.5E-34 262.1 20.6 226 421-661 5-285 (291)
162 cd05116 PTKc_Syk Catalytic dom 100.0 8.5E-30 1.8E-34 256.5 20.9 216 428-657 2-254 (257)
163 cd05084 PTKc_Fes Catalytic dom 100.0 8.4E-30 1.8E-34 255.7 20.7 215 428-656 2-251 (252)
164 cd05052 PTKc_Abl Catalytic dom 100.0 6.9E-30 1.5E-34 258.1 20.2 221 421-657 6-261 (263)
165 cd05051 PTKc_DDR Catalytic dom 100.0 5.2E-30 1.1E-34 263.8 19.6 228 421-656 5-295 (296)
166 cd05045 PTKc_RET Catalytic dom 100.0 1.1E-29 2.3E-34 260.7 21.8 223 422-658 1-286 (290)
167 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-29 2.5E-34 258.6 21.8 225 423-661 6-260 (277)
168 cd06611 STKc_SLK_like Catalyti 100.0 2.1E-30 4.5E-35 264.5 16.4 227 421-660 5-268 (280)
169 cd06643 STKc_SLK Catalytic dom 100.0 1.9E-30 4.1E-35 265.1 16.0 226 423-661 7-269 (282)
170 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-30 2.6E-35 271.6 14.8 228 422-662 1-265 (323)
171 KOG0199 ACK and related non-re 100.0 1.1E-30 2.5E-35 271.1 14.1 216 426-657 115-371 (1039)
172 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-30 1E-34 259.7 18.4 228 421-657 1-267 (267)
173 cd05095 PTKc_DDR2 Catalytic do 100.0 6.9E-30 1.5E-34 262.8 19.8 229 421-656 5-295 (296)
174 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-30 2.9E-35 277.0 14.9 236 422-660 1-294 (372)
175 cd08219 STKc_Nek3 Catalytic do 100.0 6.8E-30 1.5E-34 256.9 19.2 219 422-654 1-252 (255)
176 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-30 4.9E-35 264.9 15.8 233 422-657 1-285 (285)
177 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-29 3.2E-34 254.7 21.4 215 428-657 2-254 (257)
178 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.3E-30 1.1E-34 264.4 18.5 237 420-660 5-292 (301)
179 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.2E-30 1.8E-34 261.0 19.7 234 421-659 1-271 (287)
180 cd05097 PTKc_DDR_like Catalyti 100.0 6.4E-30 1.4E-34 262.9 18.8 225 421-656 5-294 (295)
181 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-29 2.9E-34 255.5 20.8 219 421-656 6-258 (260)
182 cd05035 PTKc_Axl_like Catalyti 100.0 1.7E-29 3.6E-34 256.6 21.5 222 423-657 1-271 (273)
183 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.9E-29 4E-34 257.9 21.9 230 424-658 7-281 (283)
184 cd05630 STKc_GRK6 Catalytic do 100.0 4.9E-30 1.1E-34 262.3 17.5 230 423-662 2-269 (285)
185 cd06917 STKc_NAK1_like Catalyt 100.0 8.3E-30 1.8E-34 259.6 19.2 226 422-660 2-261 (277)
186 cd05088 PTKc_Tie2 Catalytic do 100.0 8.2E-30 1.8E-34 263.1 19.3 224 420-658 6-280 (303)
187 cd08221 STKc_Nek9 Catalytic do 100.0 9.7E-30 2.1E-34 255.9 19.2 222 422-656 1-255 (256)
188 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.2E-29 2.5E-34 257.2 19.9 223 421-657 5-266 (268)
189 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-30 6.2E-35 261.5 15.3 225 421-656 9-267 (267)
190 cd05103 PTKc_VEGFR2 Catalytic 100.0 9.2E-30 2E-34 267.3 19.7 225 421-658 7-339 (343)
191 cd07876 STKc_JNK2 Catalytic do 100.0 6.9E-30 1.5E-34 270.2 18.8 236 420-659 20-320 (359)
192 PTZ00036 glycogen synthase kin 100.0 4.9E-30 1.1E-34 277.3 17.9 230 421-660 66-357 (440)
193 cd05091 PTKc_Ror2 Catalytic do 100.0 9.7E-30 2.1E-34 259.9 19.1 222 421-656 5-281 (283)
194 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-29 3.2E-34 257.7 20.4 222 421-656 6-276 (277)
195 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-29 5.1E-34 255.5 21.5 221 424-657 2-270 (272)
196 cd05066 PTKc_EphR_A Catalytic 100.0 2.1E-29 4.5E-34 255.2 20.9 223 421-657 4-265 (267)
197 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.7E-30 1.2E-34 262.1 16.9 227 421-660 1-268 (286)
198 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.8E-30 1E-34 262.1 16.4 231 412-657 7-282 (282)
199 cd05053 PTKc_FGFR Catalytic do 100.0 1.7E-29 3.8E-34 259.5 20.3 225 420-658 11-291 (293)
200 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.7E-29 3.8E-34 254.7 19.9 220 421-657 6-259 (260)
201 cd06605 PKc_MAPKK Catalytic do 100.0 4.7E-30 1E-34 259.5 15.8 228 422-659 2-262 (265)
202 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.1E-29 4.5E-34 255.1 20.5 224 423-657 2-267 (267)
203 cd05055 PTKc_PDGFR Catalytic d 100.0 2.5E-29 5.5E-34 259.2 21.4 224 421-657 35-300 (302)
204 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-29 3.2E-34 256.1 19.4 226 422-658 3-265 (266)
205 cd05039 PTKc_Csk_like Catalyti 100.0 2.9E-29 6.4E-34 252.4 21.4 217 421-657 6-255 (256)
206 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-29 4.2E-34 254.6 20.1 220 421-657 6-259 (262)
207 cd06647 STKc_PAK_I Catalytic d 100.0 9.2E-30 2E-34 261.4 18.0 228 421-661 19-276 (293)
208 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.2E-30 6.9E-35 263.7 14.5 231 421-659 5-271 (284)
209 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-29 4.2E-34 256.9 20.2 223 420-656 5-276 (277)
210 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-30 5.1E-35 265.5 13.5 223 426-661 27-279 (292)
211 KOG0660 Mitogen-activated prot 100.0 2.7E-30 5.9E-35 252.0 13.0 238 422-662 23-318 (359)
212 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-29 3.9E-34 257.5 19.7 221 421-656 5-279 (280)
213 cd05112 PTKc_Itk Catalytic dom 100.0 2.5E-29 5.4E-34 252.9 20.5 219 421-655 4-255 (256)
214 cd05043 PTK_Ryk Pseudokinase d 100.0 2.5E-29 5.5E-34 256.5 20.6 226 420-659 5-277 (280)
215 cd07874 STKc_JNK3 Catalytic do 100.0 3.7E-30 8.1E-35 271.9 14.9 238 419-660 15-317 (355)
216 PTZ00266 NIMA-related protein 100.0 4.1E-30 8.8E-35 289.6 15.9 228 419-660 11-301 (1021)
217 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-30 5.1E-35 264.9 12.9 234 422-657 2-286 (286)
218 cd05597 STKc_DMPK_like Catalyt 100.0 5.4E-30 1.2E-34 267.7 15.8 233 421-661 1-273 (331)
219 cd05101 PTKc_FGFR2 Catalytic d 100.0 3E-29 6.5E-34 259.1 21.1 226 420-659 14-297 (304)
220 cd05061 PTKc_InsR Catalytic do 100.0 3.2E-29 6.9E-34 256.8 21.1 225 420-658 5-278 (288)
221 cd05060 PTKc_Syk_like Catalyti 100.0 4E-29 8.6E-34 251.6 21.3 216 427-657 1-254 (257)
222 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.7E-29 5.8E-34 256.8 20.3 230 421-657 4-282 (284)
223 cd05050 PTKc_Musk Catalytic do 100.0 2.2E-29 4.9E-34 258.0 19.7 223 420-656 4-287 (288)
224 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.3E-29 7E-34 259.2 20.9 227 421-661 18-302 (307)
225 KOG0658 Glycogen synthase kina 100.0 2.1E-30 4.5E-35 253.3 11.0 227 422-658 25-310 (364)
226 cd07868 STKc_CDK8 Catalytic do 100.0 1E-29 2.2E-34 264.3 17.0 160 426-592 6-217 (317)
227 cd06613 STKc_MAP4K3_like Catal 100.0 1.9E-29 4.2E-34 254.5 18.6 224 421-655 3-261 (262)
228 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.4E-29 9.6E-34 259.0 21.7 226 421-660 12-295 (314)
229 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.2E-30 1.6E-34 261.2 15.5 235 421-657 1-286 (286)
230 cd06659 STKc_PAK6 Catalytic do 100.0 4.2E-30 9.1E-35 264.4 13.8 222 426-660 26-277 (297)
231 cd08218 STKc_Nek1 Catalytic do 100.0 1.6E-29 3.5E-34 254.3 17.6 223 422-657 1-256 (256)
232 cd05069 PTKc_Yes Catalytic dom 100.0 4.1E-29 9E-34 251.9 20.5 220 421-657 6-259 (260)
233 cd08223 STKc_Nek4 Catalytic do 100.0 2.7E-29 5.8E-34 252.8 19.0 223 422-657 1-257 (257)
234 cd06623 PKc_MAPKK_plant_like C 100.0 5.8E-29 1.3E-33 251.2 21.5 229 421-659 1-261 (264)
235 PF00069 Pkinase: Protein kina 100.0 2.2E-30 4.7E-35 261.1 10.9 228 423-657 1-260 (260)
236 cd05623 STKc_MRCK_alpha Cataly 100.0 6.6E-30 1.4E-34 267.2 14.8 234 421-662 1-274 (332)
237 cd05109 PTKc_HER2 Catalytic do 100.0 5.2E-29 1.1E-33 254.0 21.0 223 421-658 7-268 (279)
238 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-29 3.7E-34 256.5 17.3 228 423-656 3-271 (272)
239 cd05632 STKc_GRK5 Catalytic do 100.0 2.3E-29 5E-34 257.4 18.2 230 423-662 2-269 (285)
240 cd06608 STKc_myosinIII_like Ca 100.0 1E-29 2.2E-34 258.3 15.5 224 419-656 4-274 (275)
241 cd08227 PK_STRAD_alpha Pseudok 100.0 1.7E-29 3.7E-34 263.6 17.4 234 426-661 3-314 (327)
242 cd05047 PTKc_Tie Catalytic dom 100.0 6E-29 1.3E-33 252.3 20.8 216 428-658 2-268 (270)
243 cd05040 PTKc_Ack_like Catalyti 100.0 4.2E-29 9.1E-34 251.4 19.4 216 427-656 1-256 (257)
244 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-31 3.7E-36 295.1 2.2 225 421-657 1235-1497(1509)
245 cd05041 PTKc_Fes_like Catalyti 100.0 4.6E-29 9.9E-34 250.2 19.6 216 427-656 1-250 (251)
246 cd05082 PTKc_Csk Catalytic dom 100.0 5.7E-29 1.2E-33 250.3 20.2 216 421-657 6-255 (256)
247 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-29 4.4E-34 258.7 17.1 235 419-657 3-291 (291)
248 cd06652 STKc_MEKK2 Catalytic d 100.0 3.9E-29 8.4E-34 252.9 19.0 226 421-657 2-264 (265)
249 cd07875 STKc_JNK1 Catalytic do 100.0 9.8E-30 2.1E-34 269.6 15.1 236 420-659 23-323 (364)
250 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-29 5.6E-34 254.8 17.4 224 422-656 1-268 (269)
251 cd00192 PTKc Catalytic domain 100.0 6.8E-29 1.5E-33 250.2 20.3 215 427-655 1-261 (262)
252 cd07867 STKc_CDC2L6 Catalytic 100.0 2.1E-29 4.6E-34 261.9 17.0 159 427-592 7-217 (317)
253 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.7E-29 7.9E-34 254.3 18.3 207 428-655 2-273 (274)
254 cd05624 STKc_MRCK_beta Catalyt 100.0 4.5E-30 9.9E-35 268.2 11.8 234 421-662 1-274 (331)
255 cd06648 STKc_PAK_II Catalytic 100.0 2.4E-29 5.2E-34 257.2 16.9 224 423-659 21-274 (285)
256 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-29 2.6E-34 259.4 14.6 233 422-657 1-284 (284)
257 cd05058 PTKc_Met_Ron Catalytic 100.0 9.1E-29 2E-33 249.7 20.9 218 427-658 1-259 (262)
258 cd05065 PTKc_EphR_B Catalytic 100.0 7.1E-29 1.5E-33 251.6 20.1 223 421-657 4-267 (269)
259 cd06632 STKc_MEKK1_plant Catal 100.0 4.5E-29 9.7E-34 251.2 18.4 223 423-656 2-257 (258)
260 cd06626 STKc_MEKK4 Catalytic d 100.0 7.7E-29 1.7E-33 250.4 20.1 224 423-656 2-263 (264)
261 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-29 3.4E-34 259.5 15.2 234 420-657 4-291 (291)
262 cd08217 STKc_Nek2 Catalytic do 100.0 5.9E-29 1.3E-33 251.2 19.0 222 422-656 1-264 (265)
263 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.2E-29 1.3E-33 254.0 19.3 232 422-658 5-283 (284)
264 cd05034 PTKc_Src_like Catalyti 100.0 8.7E-29 1.9E-33 249.7 20.1 220 421-656 6-259 (261)
265 cd06614 STKc_PAK Catalytic dom 100.0 3.2E-29 6.8E-34 256.6 16.8 229 419-661 17-277 (286)
266 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-29 3.3E-34 258.6 14.5 233 422-657 1-284 (284)
267 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-28 2.4E-33 252.3 20.8 230 423-658 6-283 (284)
268 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.6E-29 1.9E-33 249.9 19.6 207 428-655 2-261 (262)
269 cd05586 STKc_Sck1_like Catalyt 100.0 4E-30 8.6E-35 268.8 10.2 220 429-660 1-259 (330)
270 PHA03211 serine/threonine kina 100.0 2.1E-29 4.6E-34 271.3 15.6 227 421-658 169-459 (461)
271 cd05572 STKc_cGK_PKG Catalytic 100.0 8.7E-29 1.9E-33 249.9 19.0 224 429-662 1-260 (262)
272 KOG2052 Activin A type IB rece 100.0 2.6E-29 5.5E-34 249.9 14.6 227 422-659 212-504 (513)
273 cd06607 STKc_TAO Catalytic dom 100.0 8.3E-29 1.8E-33 256.1 19.1 223 421-659 15-272 (307)
274 cd05580 STKc_PKA Catalytic dom 100.0 5.2E-29 1.1E-33 255.5 17.2 224 421-662 1-262 (290)
275 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.6E-29 5.6E-34 264.2 15.3 235 419-660 13-304 (343)
276 cd06657 STKc_PAK4 Catalytic do 100.0 3.4E-29 7.4E-34 256.9 15.8 223 427-662 26-278 (292)
277 cd07841 STKc_CDK7 Catalytic do 100.0 3.2E-29 6.9E-34 258.2 15.5 239 422-661 1-289 (298)
278 cd05574 STKc_phototropin_like 100.0 6.9E-29 1.5E-33 257.9 18.1 232 422-664 2-299 (316)
279 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-29 7.3E-34 256.6 15.5 232 422-657 1-288 (288)
280 cd06616 PKc_MKK4 Catalytic dom 100.0 5.2E-29 1.1E-33 255.3 16.8 225 421-659 4-272 (288)
281 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-28 5E-33 246.5 21.3 219 421-656 6-258 (260)
282 KOG0690 Serine/threonine prote 100.0 1.9E-30 4.2E-35 247.3 5.6 231 420-663 167-433 (516)
283 cd08225 STKc_Nek5 Catalytic do 100.0 3.7E-29 8E-34 251.7 15.1 223 422-657 1-257 (257)
284 cd05100 PTKc_FGFR3 Catalytic d 100.0 2E-28 4.3E-33 256.4 21.0 224 422-659 13-294 (334)
285 cd05057 PTKc_EGFR_like Catalyt 100.0 2.7E-28 5.9E-33 248.7 21.4 223 421-658 7-268 (279)
286 cd05056 PTKc_FAK Catalytic dom 100.0 2.7E-28 5.8E-33 247.5 21.2 224 421-659 6-266 (270)
287 cd06630 STKc_MEKK1 Catalytic d 100.0 1E-28 2.2E-33 250.2 17.8 229 422-657 1-267 (268)
288 cd05609 STKc_MAST Catalytic do 100.0 8.8E-29 1.9E-33 255.7 17.5 229 421-659 1-278 (305)
289 cd07833 STKc_CDKL Catalytic do 100.0 4.6E-29 1E-33 255.5 15.2 234 422-657 2-288 (288)
290 cd07835 STKc_CDK1_like Catalyt 100.0 4.4E-29 9.6E-34 255.1 14.4 232 423-657 1-283 (283)
291 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.6E-29 2.1E-33 252.5 16.9 228 421-662 1-269 (283)
292 PHA03207 serine/threonine kina 100.0 8.9E-29 1.9E-33 264.4 17.4 230 421-660 92-381 (392)
293 KOG4717 Serine/threonine prote 100.0 4.1E-29 8.8E-34 251.2 13.6 224 423-661 20-277 (864)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 4.3E-29 9.3E-34 256.5 14.1 234 420-657 4-293 (293)
295 KOG3653 Transforming growth fa 100.0 4.6E-29 1E-33 249.9 13.7 232 422-662 211-507 (534)
296 cd05110 PTKc_HER4 Catalytic do 100.0 2.5E-28 5.5E-33 252.0 19.8 223 421-658 7-268 (303)
297 PLN00009 cyclin-dependent kina 100.0 7.8E-29 1.7E-33 254.7 15.7 238 421-661 2-291 (294)
298 cd05044 PTKc_c-ros Catalytic d 100.0 1.8E-28 4E-33 248.5 17.9 215 428-656 2-268 (269)
299 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-28 2.4E-33 253.0 16.3 235 422-664 1-278 (290)
300 cd07836 STKc_Pho85 Catalytic d 100.0 2.5E-28 5.5E-33 249.5 18.6 232 422-657 1-284 (284)
301 cd05633 STKc_GRK3 Catalytic do 100.0 2.5E-28 5.3E-33 248.9 18.4 224 428-663 1-264 (279)
302 cd08220 STKc_Nek8 Catalytic do 100.0 2.8E-28 6E-33 245.2 18.5 221 422-656 1-255 (256)
303 KOG0587 Traf2- and Nck-interac 100.0 5.3E-29 1.2E-33 266.2 13.8 231 413-657 11-285 (953)
304 KOG0594 Protein kinase PCTAIRE 100.0 8.1E-29 1.8E-33 242.7 13.9 237 421-660 11-308 (323)
305 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.1E-29 2E-33 249.1 14.8 207 428-655 2-257 (258)
306 PTZ00284 protein kinase; Provi 100.0 1.2E-28 2.5E-33 269.6 16.5 235 419-662 127-446 (467)
307 PHA03209 serine/threonine kina 100.0 1.5E-28 3.2E-33 259.4 16.8 228 420-659 65-356 (357)
308 cd06635 STKc_TAO1 Catalytic do 100.0 4.3E-28 9.3E-33 251.9 19.8 221 423-659 27-282 (317)
309 cd05046 PTK_CCK4 Pseudokinase 100.0 6.5E-28 1.4E-32 245.3 20.6 223 421-656 5-274 (275)
310 cd05083 PTKc_Chk Catalytic dom 100.0 4.3E-28 9.4E-33 243.6 18.9 215 421-657 6-253 (254)
311 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-28 3.2E-33 251.6 15.7 233 422-657 1-285 (286)
312 cd05122 PKc_STE Catalytic doma 100.0 3.4E-28 7.4E-33 243.5 18.0 221 422-656 1-253 (253)
313 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3E-28 6.5E-33 245.3 17.1 206 427-655 1-258 (259)
314 smart00219 TyrKc Tyrosine kina 100.0 7.7E-28 1.7E-32 242.1 20.1 219 423-655 1-258 (258)
315 KOG0696 Serine/threonine prote 100.0 1.4E-29 3.1E-34 248.3 6.8 232 421-665 349-617 (683)
316 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-28 4.1E-33 253.7 15.6 241 420-663 6-299 (309)
317 cd05578 STKc_Yank1 Catalytic d 100.0 8.1E-29 1.7E-33 249.5 12.3 225 422-657 1-258 (258)
318 cd06606 STKc_MAPKKK Catalytic 100.0 9.2E-28 2E-32 241.4 20.0 224 422-657 1-260 (260)
319 cd05577 STKc_GRK Catalytic dom 100.0 4.6E-28 9.9E-33 246.8 17.9 224 429-662 1-262 (277)
320 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-27 2.3E-32 243.4 20.4 222 423-657 1-271 (273)
321 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-27 2.3E-32 240.5 19.7 222 422-656 1-253 (254)
322 KOG2345 Serine/threonine prote 100.0 4.5E-29 9.7E-34 230.3 8.6 222 421-656 21-298 (302)
323 cd07840 STKc_CDK9_like Catalyt 100.0 4.1E-28 8.8E-33 248.3 16.6 232 423-657 1-287 (287)
324 KOG1989 ARK protein kinase fam 100.0 4.1E-28 8.9E-33 262.2 17.2 218 422-659 38-312 (738)
325 cd05611 STKc_Rim15_like Cataly 100.0 4.8E-28 1.1E-32 244.1 16.6 223 427-662 2-259 (260)
326 cd07852 STKc_MAPK15 Catalytic 100.0 2.4E-28 5.3E-33 256.1 15.0 238 420-660 6-301 (337)
327 cd07842 STKc_CDK8_like Catalyt 100.0 2E-28 4.3E-33 254.4 14.2 233 423-657 2-316 (316)
328 PHA03210 serine/threonine kina 100.0 2.6E-28 5.6E-33 267.9 15.5 237 420-659 147-459 (501)
329 cd07849 STKc_ERK1_2_like Catal 100.0 1.5E-28 3.2E-33 257.6 13.0 236 420-661 4-299 (336)
330 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-28 4.8E-33 251.5 13.8 234 421-657 1-294 (295)
331 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-27 2.6E-32 240.5 18.8 223 422-657 1-258 (258)
332 KOG0584 Serine/threonine prote 100.0 7.6E-29 1.7E-33 257.1 9.9 223 426-660 45-302 (632)
333 KOG0586 Serine/threonine prote 100.0 3.2E-28 6.9E-33 252.3 14.4 224 420-658 55-310 (596)
334 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.5E-28 7.7E-33 254.8 14.8 237 421-660 5-297 (337)
335 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-27 3.5E-32 242.8 19.1 223 428-662 1-263 (278)
336 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-27 2.3E-32 252.9 18.3 239 420-662 15-319 (353)
337 KOG0200 Fibroblast/platelet-de 100.0 1.1E-27 2.4E-32 266.9 19.2 221 424-657 299-578 (609)
338 cd07865 STKc_CDK9 Catalytic do 100.0 8.7E-28 1.9E-32 248.9 17.2 236 419-657 10-310 (310)
339 cd07830 STKc_MAK_like Catalyti 100.0 6.8E-28 1.5E-32 246.2 16.1 230 423-657 1-283 (283)
340 cd07879 STKc_p38delta_MAPK13 C 100.0 4.5E-28 9.7E-33 254.5 15.1 242 413-660 3-303 (342)
341 cd08216 PK_STRAD Pseudokinase 100.0 5.3E-28 1.1E-32 251.0 15.1 230 429-661 10-302 (314)
342 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.5E-27 5.5E-32 239.5 19.4 225 421-656 2-263 (264)
343 cd07864 STKc_CDK12 Catalytic d 100.0 1E-27 2.3E-32 247.4 16.8 236 419-657 5-302 (302)
344 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-27 3.6E-32 243.3 18.0 229 423-657 1-282 (282)
345 KOG0986 G protein-coupled rece 100.0 7.1E-29 1.5E-33 246.7 7.5 233 421-663 185-455 (591)
346 cd06634 STKc_TAO2 Catalytic do 100.0 1.1E-27 2.3E-32 247.9 16.6 222 423-660 17-273 (308)
347 cd05583 STKc_MSK_N N-terminal 100.0 6.9E-28 1.5E-32 246.9 14.5 233 422-662 1-274 (288)
348 KOG1025 Epidermal growth facto 100.0 1.4E-28 3E-33 260.0 9.4 219 424-657 699-956 (1177)
349 KOG0612 Rho-associated, coiled 100.0 2.2E-29 4.7E-34 275.2 3.3 238 416-663 70-347 (1317)
350 cd05579 STKc_MAST_like Catalyt 100.0 7.1E-28 1.5E-32 243.3 14.2 222 429-661 1-264 (265)
351 cd06618 PKc_MKK7 Catalytic dom 99.9 1.8E-27 3.9E-32 244.9 16.9 227 420-659 14-278 (296)
352 PTZ00024 cyclin-dependent prot 99.9 1.1E-27 2.4E-32 251.0 15.2 234 426-660 14-319 (335)
353 cd08226 PK_STRAD_beta Pseudoki 99.9 2.8E-27 6.1E-32 247.1 17.9 230 428-661 5-315 (328)
354 cd07855 STKc_ERK5 Catalytic do 99.9 8.1E-28 1.8E-32 251.8 13.6 236 421-659 5-299 (334)
355 KOG4250 TANK binding protein k 99.9 4.7E-28 1E-32 254.3 11.5 165 424-592 16-225 (732)
356 PHA03390 pk1 serine/threonine- 99.9 5.2E-27 1.1E-31 237.5 18.7 224 414-658 7-266 (267)
357 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.9E-27 4.1E-32 248.1 15.7 235 418-658 7-292 (328)
358 cd07838 STKc_CDK4_6_like Catal 99.9 3.6E-27 7.8E-32 241.4 17.5 231 423-657 1-287 (287)
359 cd08530 STKc_CNK2-like Catalyt 99.9 1.5E-27 3.3E-32 239.7 14.4 219 422-655 1-254 (256)
360 cd07866 STKc_BUR1 Catalytic do 99.9 7E-28 1.5E-32 249.7 12.0 235 420-657 7-311 (311)
361 cd05581 STKc_PDK1 Catalytic do 99.9 9.7E-28 2.1E-32 244.5 12.6 224 421-657 1-280 (280)
362 cd07877 STKc_p38alpha_MAPK14 C 99.9 2.5E-27 5.4E-32 249.0 16.0 243 412-660 8-306 (345)
363 cd05118 STKc_CMGC Catalytic do 99.9 2.8E-27 6.1E-32 241.6 15.7 232 423-657 1-283 (283)
364 cd08222 STKc_Nek11 Catalytic d 99.9 1.8E-27 3.9E-32 240.0 13.6 224 422-657 1-260 (260)
365 cd06633 STKc_TAO3 Catalytic do 99.9 7.3E-27 1.6E-31 242.2 18.3 221 423-659 23-278 (313)
366 cd07834 STKc_MAPK Catalytic do 99.9 2.6E-27 5.7E-32 247.6 14.5 236 422-660 1-295 (330)
367 KOG1035 eIF-2alpha kinase GCN2 99.9 1.1E-27 2.4E-32 263.9 11.7 227 418-657 476-874 (1351)
368 cd07829 STKc_CDK_like Catalyti 99.9 2.2E-27 4.8E-32 242.3 12.7 232 423-657 1-282 (282)
369 PHA02882 putative serine/threo 99.9 1E-26 2.2E-31 238.9 17.5 229 421-655 12-293 (294)
370 cd05123 STKc_AGC Catalytic dom 99.9 7.1E-27 1.5E-31 234.0 15.2 216 429-657 1-250 (250)
371 cd07851 STKc_p38 Catalytic dom 99.9 1.6E-27 3.4E-32 250.5 10.3 235 420-660 14-304 (343)
372 cd07854 STKc_MAPK4_6 Catalytic 99.9 2.7E-27 6E-32 248.5 12.1 235 421-660 5-306 (342)
373 KOG0614 cGMP-dependent protein 99.9 1.7E-28 3.7E-33 246.6 2.7 234 419-664 418-687 (732)
374 KOG0444 Cytoskeletal regulator 99.9 1.5E-29 3.1E-34 259.7 -5.8 300 5-312 9-337 (1255)
375 KOG0695 Serine/threonine prote 99.9 2.2E-27 4.7E-32 227.2 8.9 239 420-663 249-525 (593)
376 cd05610 STKc_MASTL Catalytic d 99.9 2.1E-26 4.6E-31 260.6 18.2 125 420-545 3-152 (669)
377 KOG0608 Warts/lats-like serine 99.9 5.6E-27 1.2E-31 241.1 11.5 245 411-664 616-938 (1034)
378 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.2E-26 2.6E-31 243.7 14.4 235 420-660 14-304 (343)
379 cd07857 STKc_MPK1 Catalytic do 99.9 3.2E-26 7E-31 239.5 16.5 234 422-658 1-296 (332)
380 KOG1151 Tousled-like protein k 99.9 1.2E-27 2.7E-32 236.6 5.1 228 423-657 465-744 (775)
381 KOG0444 Cytoskeletal regulator 99.9 8.7E-29 1.9E-33 254.0 -4.1 290 25-319 5-321 (1255)
382 KOG0607 MAP kinase-interacting 99.9 1.3E-26 2.7E-31 221.0 9.7 235 427-665 84-372 (463)
383 PLN03225 Serine/threonine-prot 99.9 2.9E-26 6.4E-31 253.0 13.3 235 419-661 130-457 (566)
384 KOG0984 Mitogen-activated prot 99.9 9.1E-27 2E-31 209.2 6.8 167 421-592 46-253 (282)
385 KOG0667 Dual-specificity tyros 99.9 5.4E-26 1.2E-30 238.3 13.6 231 422-661 187-509 (586)
386 KOG0666 Cyclin C-dependent kin 99.9 2.2E-26 4.8E-31 218.7 7.8 239 419-660 22-343 (438)
387 KOG0576 Mitogen-activated prot 99.9 4.8E-27 1E-31 243.8 2.8 226 420-656 14-273 (829)
388 KOG0603 Ribosomal protein S6 k 99.9 5.2E-26 1.1E-30 237.2 10.2 214 420-657 321-566 (612)
389 KOG4236 Serine/threonine prote 99.9 1.7E-26 3.7E-31 233.0 6.3 221 426-659 569-824 (888)
390 cd05576 STKc_RPK118_like Catal 99.9 1.6E-25 3.5E-30 222.4 13.1 197 432-656 4-236 (237)
391 KOG0604 MAP kinase-activated p 99.9 9.5E-26 2.1E-30 213.5 9.3 226 420-659 60-327 (400)
392 KOG0662 Cyclin-dependent kinas 99.9 2.1E-25 4.6E-30 195.8 8.6 166 422-590 3-201 (292)
393 PLN03224 probable serine/threo 99.9 8.4E-25 1.8E-29 235.2 15.1 236 420-659 144-505 (507)
394 smart00220 S_TKc Serine/Threon 99.9 9.1E-25 2E-29 217.1 14.0 212 433-656 1-243 (244)
395 KOG0472 Leucine-rich repeat pr 99.9 3.9E-27 8.4E-32 231.0 -5.4 291 3-303 114-541 (565)
396 KOG0669 Cyclin T-dependent kin 99.9 7.5E-26 1.6E-30 209.0 0.1 235 421-660 17-321 (376)
397 KOG1024 Receptor-like protein 99.9 5.4E-24 1.2E-28 208.2 11.1 224 420-658 283-555 (563)
398 KOG0472 Leucine-rich repeat pr 99.9 1.3E-26 2.8E-31 227.4 -7.5 303 3-315 91-529 (565)
399 KOG1027 Serine/threonine prote 99.9 4.5E-24 9.8E-29 227.6 6.7 215 423-657 511-770 (903)
400 PLN03210 Resistant to P. syrin 99.9 2E-21 4.2E-26 232.5 23.4 297 4-314 590-893 (1153)
401 cd00180 PKc Catalytic domain o 99.9 3.1E-21 6.6E-26 187.0 17.0 181 429-655 1-215 (215)
402 KOG0668 Casein kinase II, alph 99.9 9.8E-23 2.1E-27 186.0 5.5 234 420-661 37-329 (338)
403 KOG0671 LAMMER dual specificit 99.9 1.2E-22 2.5E-27 199.4 6.4 231 420-659 88-411 (415)
404 PRK15387 E3 ubiquitin-protein 99.9 2.8E-21 6.1E-26 215.0 17.9 265 4-311 202-466 (788)
405 PLN03210 Resistant to P. syrin 99.9 9.4E-21 2E-25 226.7 23.2 277 28-319 590-874 (1153)
406 smart00221 STYKc Protein kinas 99.8 1.7E-20 3.8E-25 184.2 14.9 167 423-592 1-201 (225)
407 PRK15387 E3 ubiquitin-protein 99.8 4E-20 8.7E-25 205.9 16.0 247 3-289 222-468 (788)
408 KOG4237 Extracellular matrix p 99.8 8E-23 1.7E-27 200.7 -5.8 287 4-302 68-358 (498)
409 KOG0618 Serine/threonine phosp 99.8 5.9E-22 1.3E-26 213.5 -3.2 282 8-303 183-465 (1081)
410 KOG1345 Serine/threonine kinas 99.8 1E-20 2.2E-25 177.1 5.2 225 420-656 23-289 (378)
411 PRK15370 E3 ubiquitin-protein 99.8 8E-20 1.7E-24 204.9 11.7 202 4-231 179-380 (754)
412 KOG0665 Jun-N-terminal kinase 99.8 1.8E-20 3.9E-25 179.8 4.3 231 423-658 19-314 (369)
413 KOG0664 Nemo-like MAPK-related 99.8 4E-21 8.6E-26 179.7 -0.6 233 422-658 54-347 (449)
414 KOG1152 Signal transduction se 99.8 6.4E-20 1.4E-24 188.2 6.9 172 418-591 558-769 (772)
415 smart00750 KIND kinase non-cat 99.8 3E-19 6.4E-24 168.6 10.2 125 524-659 38-170 (176)
416 KOG4237 Extracellular matrix p 99.8 9.9E-22 2.1E-26 193.1 -7.0 274 27-323 67-355 (498)
417 KOG0618 Serine/threonine phosp 99.8 5.4E-21 1.2E-25 206.2 -3.4 288 2-301 198-487 (1081)
418 PRK15370 E3 ubiquitin-protein 99.8 8.3E-19 1.8E-23 196.7 13.7 248 27-304 178-429 (754)
419 KOG0670 U4/U6-associated splic 99.8 1.1E-19 2.4E-24 184.1 3.3 231 421-659 432-751 (752)
420 PLN00181 protein SPA1-RELATED; 99.8 1.2E-19 2.6E-24 210.9 3.7 170 476-659 27-270 (793)
421 KOG0195 Integrin-linked kinase 99.8 5.1E-19 1.1E-23 165.6 4.5 215 425-657 194-445 (448)
422 cd00116 LRR_RI Leucine-rich re 99.8 8.1E-20 1.8E-24 190.1 -0.9 275 7-302 2-319 (319)
423 PRK09188 serine/threonine prot 99.8 8E-18 1.7E-22 173.8 13.9 145 420-568 17-191 (365)
424 cd00116 LRR_RI Leucine-rich re 99.7 1.4E-19 3.1E-24 188.2 -0.7 257 31-305 2-293 (319)
425 KOG1167 Serine/threonine prote 99.7 2E-18 4.2E-23 172.2 3.9 232 421-658 36-385 (418)
426 KOG0617 Ras suppressor protein 99.7 9.5E-19 2.1E-23 153.1 -2.0 166 118-289 29-195 (264)
427 KOG0617 Ras suppressor protein 99.7 8.5E-19 1.8E-23 153.4 -4.0 163 96-264 31-194 (264)
428 KOG0603 Ribosomal protein S6 k 99.7 5.3E-18 1.1E-22 177.7 0.0 213 429-663 2-252 (612)
429 KOG1023 Natriuretic peptide re 99.7 1.8E-16 4E-21 166.5 8.8 185 475-660 1-226 (484)
430 PRK10359 lipopolysaccharide co 99.6 2.5E-16 5.4E-21 151.1 6.4 166 410-585 18-216 (232)
431 COG0515 SPS1 Serine/threonine 99.6 1E-14 2.2E-19 151.8 19.3 228 423-654 2-275 (384)
432 KOG0590 Checkpoint kinase and 99.6 1.9E-16 4E-21 174.6 4.0 232 425-660 322-591 (601)
433 KOG1290 Serine/threonine prote 99.6 8.6E-15 1.9E-19 148.3 12.7 79 421-504 78-169 (590)
434 PRK12274 serine/threonine prot 99.6 3.4E-14 7.4E-19 133.4 12.7 163 424-591 5-207 (218)
435 cd05147 RIO1_euk RIO kinase fa 99.5 2.5E-13 5.3E-18 129.1 9.5 119 426-547 2-167 (190)
436 cd05145 RIO1_like RIO kinase f 99.4 7.5E-13 1.6E-17 126.2 11.6 120 426-548 2-168 (190)
437 KOG1240 Protein kinase contain 99.4 3.3E-14 7.1E-19 156.8 1.4 215 422-654 24-291 (1431)
438 KOG1164 Casein kinase (serine/ 99.4 5.6E-12 1.2E-16 130.8 16.8 224 422-657 19-296 (322)
439 PRK10345 hypothetical protein; 99.4 1.3E-12 2.9E-17 125.2 10.8 117 423-545 4-157 (210)
440 KOG1033 eIF-2alpha kinase PEK/ 99.3 6.9E-13 1.5E-17 137.0 2.9 147 494-654 329-512 (516)
441 PRK09605 bifunctional UGMP fam 99.3 1.4E-11 3E-16 136.7 12.3 126 421-547 333-477 (535)
442 PRK14879 serine/threonine prot 99.3 1.6E-11 3.4E-16 119.5 11.2 118 427-546 2-143 (211)
443 cd05144 RIO2_C RIO kinase fami 99.3 1.5E-11 3.2E-16 118.3 10.5 122 423-548 17-176 (198)
444 KOG0606 Microtubule-associated 99.3 2.4E-12 5.3E-17 142.2 5.0 214 421-662 83-323 (1205)
445 KOG0532 Leucine-rich repeat (L 99.3 1.3E-13 2.8E-18 142.3 -4.6 171 5-207 77-247 (722)
446 TIGR03724 arch_bud32 Kae1-asso 99.3 2.1E-11 4.6E-16 117.4 10.1 117 428-546 1-138 (199)
447 PF14531 Kinase-like: Kinase-l 99.2 2.2E-11 4.7E-16 120.8 8.9 200 424-645 15-288 (288)
448 KOG1165 Casein kinase (serine/ 99.2 4E-11 8.6E-16 116.5 9.6 166 422-594 29-239 (449)
449 KOG4158 BRPK/PTEN-induced prot 99.2 4.6E-11 9.9E-16 118.6 10.2 164 478-652 273-508 (598)
450 KOG0532 Leucine-rich repeat (L 99.2 5.2E-13 1.1E-17 137.9 -4.1 179 98-286 75-253 (722)
451 KOG1163 Casein kinase (serine/ 99.2 3.4E-11 7.3E-16 111.9 6.6 175 413-595 8-225 (341)
452 smart00090 RIO RIO-like kinase 99.2 9.5E-11 2.1E-15 115.3 9.6 121 423-548 30-199 (237)
453 COG4886 Leucine-rich repeat (L 99.2 4.9E-11 1.1E-15 127.8 7.8 200 78-286 97-297 (394)
454 COG4886 Leucine-rich repeat (L 99.2 5.2E-11 1.1E-15 127.6 7.9 200 102-310 97-297 (394)
455 KOG0590 Checkpoint kinase and 99.2 5.4E-12 1.2E-16 139.5 -0.0 226 422-659 21-291 (601)
456 PLN03150 hypothetical protein; 99.1 1.1E-10 2.4E-15 131.0 7.8 113 195-307 419-532 (623)
457 PLN03150 hypothetical protein; 99.1 1.3E-10 2.9E-15 130.3 8.3 94 219-312 419-512 (623)
458 KOG3207 Beta-tubulin folding c 99.1 1.5E-11 3.3E-16 123.6 -0.2 208 2-232 120-340 (505)
459 KOG1259 Nischarin, modulator o 99.0 4.1E-11 8.9E-16 114.6 0.5 135 140-280 278-413 (490)
460 cd05120 APH_ChoK_like Aminogly 99.0 3.5E-10 7.5E-15 103.3 6.6 114 426-546 3-138 (155)
461 PRK01723 3-deoxy-D-manno-octul 99.0 1.8E-09 3.9E-14 106.5 11.7 121 426-547 36-192 (239)
462 TIGR01982 UbiB 2-polyprenylphe 99.0 8.1E-10 1.8E-14 118.6 9.9 128 421-549 118-309 (437)
463 cd05119 RIO RIO kinase family, 99.0 2E-09 4.3E-14 102.5 10.4 118 426-548 2-165 (187)
464 PRK04750 ubiB putative ubiquin 99.0 6.9E-09 1.5E-13 112.7 15.5 128 420-548 119-315 (537)
465 KOG3207 Beta-tubulin folding c 99.0 9.8E-11 2.1E-15 117.9 1.1 205 98-304 121-340 (505)
466 KOG1909 Ran GTPase-activating 99.0 2.4E-11 5.2E-16 119.1 -3.8 136 168-303 155-311 (382)
467 KOG1166 Mitotic checkpoint ser 98.9 1.1E-09 2.5E-14 123.8 7.3 163 420-589 697-901 (974)
468 KOG4658 Apoptotic ATPase [Sign 98.9 5E-10 1.1E-14 128.4 4.5 265 4-273 546-826 (889)
469 KOG1259 Nischarin, modulator o 98.9 2.3E-10 5E-15 109.6 1.3 138 114-257 276-414 (490)
470 KOG1909 Ran GTPase-activating 98.9 6E-11 1.3E-15 116.3 -2.8 241 3-254 30-310 (382)
471 PF14580 LRR_9: Leucine-rich r 98.9 1E-09 2.2E-14 101.3 4.8 16 239-254 110-125 (175)
472 PF13855 LRR_8: Leucine rich r 98.9 8.6E-10 1.9E-14 83.6 3.4 61 3-63 1-61 (61)
473 KOG0531 Protein phosphatase 1, 98.9 1.4E-10 3E-15 124.6 -1.5 196 97-304 117-319 (414)
474 PF14580 LRR_9: Leucine-rich r 98.9 1.2E-09 2.6E-14 100.8 4.6 125 24-152 16-146 (175)
475 KOG0531 Protein phosphatase 1, 98.9 2E-10 4.4E-15 123.4 -1.2 244 26-283 71-322 (414)
476 KOG4658 Apoptotic ATPase [Sign 98.7 4.9E-09 1.1E-13 120.4 3.7 125 5-132 525-652 (889)
477 PF13855 LRR_8: Leucine rich r 98.7 1.4E-08 3.1E-13 76.8 3.8 59 123-181 2-60 (61)
478 KOG0601 Cyclin-dependent kinas 98.7 2.7E-08 5.9E-13 105.4 5.9 215 423-654 116-379 (524)
479 cd05151 ChoK Choline Kinase (C 98.5 4.4E-07 9.5E-12 84.7 9.2 111 427-546 4-136 (170)
480 KOG1266 Protein kinase [Signal 98.5 6.1E-08 1.3E-12 94.6 2.2 171 473-658 119-335 (458)
481 KOG1859 Leucine-rich repeat pr 98.4 5.8E-09 1.3E-13 111.2 -6.2 127 99-231 165-292 (1096)
482 KOG0601 Cyclin-dependent kinas 98.4 2E-07 4.4E-12 98.9 4.2 220 418-658 262-518 (524)
483 KOG1859 Leucine-rich repeat pr 98.4 1.3E-08 2.9E-13 108.5 -5.1 126 147-278 165-291 (1096)
484 KOG0606 Microtubule-associated 98.3 1.1E-07 2.3E-12 106.2 -0.1 233 419-663 802-1101(1205)
485 KOG2982 Uncharacterized conser 98.3 4.8E-08 1E-12 94.0 -2.7 108 26-133 44-157 (418)
486 KOG1243 Protein kinase [Genera 98.3 6.7E-06 1.4E-10 88.5 12.6 144 441-588 33-200 (690)
487 COG3642 Mn2+-dependent serine/ 98.3 4.3E-06 9.3E-11 76.2 9.5 118 428-547 3-141 (204)
488 KOG2982 Uncharacterized conser 98.1 3.3E-07 7.1E-12 88.3 -1.6 103 7-109 49-157 (418)
489 KOG2120 SCF ubiquitin ligase, 98.0 3.4E-07 7.3E-12 88.3 -4.6 175 124-300 187-373 (419)
490 KOG2120 SCF ubiquitin ligase, 98.0 8.7E-08 1.9E-12 92.3 -8.7 175 4-180 186-373 (419)
491 cd05154 ACAD10_11_like Acyl-Co 97.9 3.9E-05 8.4E-10 74.9 8.2 81 427-510 4-89 (223)
492 KOG4579 Leucine-rich repeat (L 97.9 7.7E-07 1.7E-11 76.1 -3.5 81 171-254 54-135 (177)
493 PF12799 LRR_4: Leucine Rich r 97.9 1.1E-05 2.4E-10 55.9 2.8 36 4-40 2-37 (44)
494 COG5238 RNA1 Ran GTPase-activa 97.9 3.1E-06 6.7E-11 80.7 -0.1 243 3-256 30-317 (388)
495 cd05146 RIO3_euk RIO kinase fa 97.8 9.5E-05 2.1E-09 69.8 9.7 116 427-547 3-174 (197)
496 KOG3087 Serine/threonine prote 97.8 0.00018 3.9E-09 65.5 10.3 121 425-546 11-165 (229)
497 COG0661 AarF Predicted unusual 97.8 0.00034 7.3E-09 76.0 14.6 129 420-549 125-317 (517)
498 PF12799 LRR_4: Leucine Rich r 97.8 1.6E-05 3.5E-10 55.1 2.8 38 27-65 1-38 (44)
499 COG5238 RNA1 Ran GTPase-activa 97.8 3.9E-06 8.5E-11 80.0 -0.4 239 25-279 28-316 (388)
500 KOG4579 Leucine-rich repeat (L 97.7 1.8E-06 3.8E-11 74.0 -3.3 103 6-111 30-136 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-71 Score=660.21 Aligned_cols=634 Identities=28% Similarity=0.419 Sum_probs=412.1
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
++++|+.|+|++|.+++.+|..+.++++|+.|+|++|++.+.+|.++.++++|++|+|++|.+.+.+|..+.. .+|+.|
T Consensus 234 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 313 (968)
T PLN00113 234 GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEIL 313 (968)
T ss_pred cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEE
Confidence 3678888888888888888888888888888888888888888888888888888888888888777777665 458888
Q ss_pred EcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccC
Q 042735 80 ALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFF 159 (667)
Q Consensus 80 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 159 (667)
+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++..|..+..+.+|+.|++++|.+.
T Consensus 314 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~ 393 (968)
T PLN00113 314 HLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393 (968)
T ss_pred ECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEec
Confidence 88888887777777777777888888777777777777777777777777777777666666666666666666666665
Q ss_pred CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCC----------------------
Q 042735 160 GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKL---------------------- 217 (667)
Q Consensus 160 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l---------------------- 217 (667)
+.+|..+..+++|+.|++++|.+++.+|..+.+++.|+.|++++|.+.+.+|..+..+
T Consensus 394 ~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 473 (968)
T PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473 (968)
T ss_pred ccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc
Confidence 5555555555555555555555555555555555555555555555554444433333
Q ss_pred -cccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEE
Q 042735 218 -NSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELE 296 (667)
Q Consensus 218 -~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~ 296 (667)
++|+.|++++|++.+.+|..+.++++|+.|+|++|++.+.+|..+.++++|+.|++++|.+.+.+|..+..+++|+.|+
T Consensus 474 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 4555555666666666666666677777777777777777777777777777777777777777777777777777777
Q ss_pred CcCCCCCCcCcccccCCcccccc----ccccccCCCCCccccccCcccceeeeccccCccCcCCCCCCCC--CC----C-
Q 042735 297 LSHNFLGREIPSQICSMECCEVF----CTITNSVPTNNFLNCQKGYACQKVVLTFQQFSTSAKICPNLSR--LP----T- 365 (667)
Q Consensus 297 l~~n~l~~~ip~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--~~----~- 365 (667)
+++|.+.+.+|..+..+..+..+ |.+.+.+|....+.. +....+......|+.... .+ .
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~----------~~~~~~~~n~~lc~~~~~~~~~~c~~~~ 623 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA----------INASAVAGNIDLCGGDTTSGLPPCKRVR 623 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcc----------cChhhhcCCccccCCccccCCCCCcccc
Confidence 77777777777666555544433 223333332211000 000001111233432100 00 0
Q ss_pred -CCC---chh---hHHHHHH---HHHHHhhhccccCCCCCCCCcCcchhh----ccCCCcCHHHHHHHHcCCcCcceeec
Q 042735 366 -NHH---PQS---GCISVIA---YVPIIWDQANREGQRSPQNSQGLLSIL----SFKGKFDYVEIIRAINDFDAKYCIGS 431 (667)
Q Consensus 366 -~~~---~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~f~~~~~lg~ 431 (667)
... ... +++.+++ ++.+.+++++....+..+...+..... .....+++.++. ..|...+.||+
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~ 700 (968)
T PLN00113 624 KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISR 700 (968)
T ss_pred ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHH---hhCCcccEEcc
Confidence 000 011 1111111 111122222211111111111111110 111234455544 45777889999
Q ss_pred ccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCChHH
Q 042735 432 GRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSLAT 510 (667)
Q Consensus 432 g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~ 510 (667)
|+||.||+|+. .++..||||++..... ...+|++.+++++|||||+++|+|.+.+..++||||+++|+|.+
T Consensus 701 G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~ 772 (968)
T PLN00113 701 GKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSE 772 (968)
T ss_pred CCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHH
Confidence 99999999986 5788999998864221 12246889999999999999999999999999999999999988
Q ss_pred Hhccc------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCC
Q 042735 511 NLSND------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAP 566 (667)
Q Consensus 511 ~l~~~------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aP 566 (667)
++..- ....|.|+||+||++|.++.+++. ||.+...... ....||+.||||
T Consensus 773 ~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aP 847 (968)
T PLN00113 773 VLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAP 847 (968)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCc
Confidence 76431 122355999999999999999886 7766543222 234689999999
Q ss_pred C------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChh------hhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 567 D------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPS------VINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 567 E------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
| |+.|+|||||||++|||+||+.|++.......... .........+|+.+....+...+++.++++++
T Consensus 848 E~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 927 (968)
T PLN00113 848 ETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLA 927 (968)
T ss_pred ccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHH
Confidence 9 57799999999999999999999753221111000 00111223445555443333345677888999
Q ss_pred HhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 635 FSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+||+.+|++||||+||++++.....
T Consensus 928 ~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 928 LHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999987644
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=380.65 Aligned_cols=247 Identities=35% Similarity=0.613 Sum_probs=198.8
Q ss_pred CCCcCHHHHHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEE
Q 042735 408 KGKFDYVEIIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFY 487 (667)
Q Consensus 408 ~~~~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~ 487 (667)
...|++.|+.+||++|+..+.||+|+||.||+|.+.++..||||++....... .++|.+|++++++++|||+|+++
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~----~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG----EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc----hhHHHHHHHHHhcCCCcCcccEE
Confidence 45799999999999999999999999999999999999999999876533211 34699999999999999999999
Q ss_pred EEEEeCC-ceEEEEEecCCCChHHHhccccC-----------------------------CcccccccCCeeecCCCceE
Q 042735 488 GFCSHAR-HSILIYEYLKRGSLATNLSNDAA-----------------------------AEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 488 g~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~-----------------------------~~~~dlk~~NiLld~~~~~k 537 (667)
|||.+.+ +.+||||||++|+|.++|+.... ..|.||||+|||||+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999998 49999999999999998876432 12349999999999999999
Q ss_pred EecccccccccCCCCCcccc-cccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCC-------Chhh
Q 042735 538 VSDFGIAKFLKPDSSNWSAL-VGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILP-------SPSV 603 (667)
Q Consensus 538 l~DFGla~~~~~~~~~~~~~-~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-------~~~~ 603 (667)
|+|||+|+..........+. .||.+|+|||| ++|+|||||||+|+|++||+.|.+....... .+..
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999998765411112222 89999999996 5699999999999999999988663220000 1122
Q ss_pred hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 604 INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+..+.+++|+++..........+.++.++|.+|++.+|.+||+|.||+++|...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 2335778899998632222125677899999999999999999999999998544
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-42 Score=333.82 Aligned_cols=229 Identities=25% Similarity=0.372 Sum_probs=179.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-ceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-HSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-~~~lv 499 (667)
+++....||+|..|+||+++++ +++.+|.|.+... .+...+++..+|++++.+..||+||.+||.|.... ...++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~---~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN---IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc---CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 4456678999999999999874 5788999988432 23456788999999999999999999999999988 59999
Q ss_pred EEecCCCChHHHhccc-------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||++|+|++.+... ....|+||||+|||+...|++||||||+++.+... ..
T Consensus 157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a 234 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IA 234 (364)
T ss_pred hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hc
Confidence 9999999998876531 22335699999999999999999999999987755 45
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
.+++||..||||| |+.++||||||+.++|+++|+.|+..... ...... ..+..+++...|..+.. ....
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~--~~~~~~-~Ll~~Iv~~ppP~lP~~--~fS~ 309 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP--PYLDIF-ELLCAIVDEPPPRLPEG--EFSP 309 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC--CCCCHH-HHHHHHhcCCCCCCCcc--cCCH
Confidence 6799999999999 88999999999999999999999753311 011111 12233444222221111 2344
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
++..++..|+++||.+|||++|+++|.|....
T Consensus 310 ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 310 EFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 67788889999999999999999999987643
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=345.65 Aligned_cols=228 Identities=30% Similarity=0.536 Sum_probs=178.0
Q ss_pred cCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-ceEEEEEe
Q 042735 424 DAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-HSILIYEY 502 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-~~~lv~ey 502 (667)
.....+|+|+||+||+|.+++...||||++......... .+.|.+|+.+|.+++|||||+++|+|.++. ...+||||
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 344559999999999999988777999998765443322 678999999999999999999999999987 79999999
Q ss_pred cCCCChHHHhccc--------------------------cC-CcccccccCCeeecCCC-ceEEecccccccccCCCCCc
Q 042735 503 LKRGSLATNLSND--------------------------AA-AEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 503 ~~~g~L~~~l~~~--------------------------~~-~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~~~ 554 (667)
|++|+|.+.++.. .. ..|.||||+|||++.++ ++||||||+++.........
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 9999999988551 12 34569999999999998 99999999999876543334
Q ss_pred ccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 555 SALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 555 ~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
+...||+.||||| |+.|+|||||||++|||+||+.||.....+ .+..........+.++...+
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~----~~~~~v~~~~~Rp~~p~~~~----- 272 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV----QVASAVVVGGLRPPIPKECP----- 272 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhcCCCCCCCccCC-----
Confidence 4578999999998 677999999999999999999998744321 11111112222333333222
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
..+..++.+||+.||++||++.||+..|......+.
T Consensus 273 -~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 273 -PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred -HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 245667778999999999999999999887654433
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-40 Score=325.95 Aligned_cols=231 Identities=26% Similarity=0.366 Sum_probs=180.4
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchH---HhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQI---ADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
+.|...+.+|+|+||.|-+|. .++|+.||||.+.+....... .......+|+++|.++.|||||++++++..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 445677889999999999995 577999999998765432211 1222356999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCC---CceEEecccccccccC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLE---HKAHVSDFGIAKFLKP 549 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~---~~~kl~DFGla~~~~~ 549 (667)
||||||++||+|.+.+-... ...|+||||+|||+..+ ..+||+|||+|+...
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g- 330 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG- 330 (475)
T ss_pred EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc-
Confidence 99999999999998764332 22355999999999755 789999999999876
Q ss_pred CCCCcccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 550 DSSNWSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
....+.++||||.|+||| |..|+|+||+|||||-+++|.+||..... .+.. .+.+...+.+..+
T Consensus 331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~---~~sl----~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT---DPSL----KEQILKGRYAFGP 403 (475)
T ss_pred cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC---CccH----HHHHhcCcccccC
Confidence 344567899999999999 34589999999999999999999863221 1111 1223333444333
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+.+.+-..+..+++..+|..||+.|||+.|++++.|+..
T Consensus 404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 404 LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 444445556778888999999999999999999999973
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=331.32 Aligned_cols=213 Identities=31% Similarity=0.563 Sum_probs=166.2
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
..+.||+|.||.||.|.+.....||||.++... ...+.|.+|+++|++++|+|||+++|+|..++.++||||||+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccc-----cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 446799999999999999988899999887531 234579999999999999999999999999889999999999
Q ss_pred CCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 505 RGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 505 ~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
+|+|.++|+.+.. ..|+||.++|||++++..+||+|||+||....+ .++...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~--~Y~~~~ 362 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD--EYTASE 362 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC--ceeecC
Confidence 9999999986211 124599999999999999999999999954332 222222
Q ss_pred c---cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCC--CCCCCCCchHHH
Q 042735 559 G---TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDP--RLPPPSPDVQGK 626 (667)
Q Consensus 559 G---t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 626 (667)
| ...|.||| |+.|||||||||+||||+| |+.|+..... ..+ .+.++. ++|.| + .+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn----~ev-----~~~le~GyRlp~P--~--~C 429 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN----EEV-----LELLERGYRLPRP--E--GC 429 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH----HHH-----HHHHhccCcCCCC--C--CC
Confidence 2 36899999 6889999999999999999 8888653321 111 122222 23322 1 23
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.++|..||..+|++||||+.+...+..
T Consensus 430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~ 460 (468)
T KOG0197|consen 430 PDEVYELMKSCWHEDPEDRPTFETLREVLED 460 (468)
T ss_pred CHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence 3467889999999999999999977666544
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=314.78 Aligned_cols=232 Identities=25% Similarity=0.377 Sum_probs=183.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..++||+|+||+||+++.+ .++.+|+|++++..-.. ..+.+...+|..++.+++||+||+++-.|++.+.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh-hhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 578999999999999999999764 57889999987654322 2346678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|+||+.||+|+.+|.+... ..++|+||+|||||++|+++|+|||+++.........
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t 182 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT 182 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc
Confidence 9999999999999875421 1123999999999999999999999999766555556
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
.++|||+.||||| |+..+|+||+||++|||+||.+||....... .. +.+...+.+.+......
T Consensus 183 ~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~----~~----~~I~~~k~~~~p~~ls~--- 251 (357)
T KOG0598|consen 183 RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK----MY----DKILKGKLPLPPGYLSE--- 251 (357)
T ss_pred ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH----HH----HHHhcCcCCCCCccCCH---
Confidence 6799999999999 7899999999999999999999986433211 11 11222221111111111
Q ss_pred HHHHHHHhccccCCCCC----CCHHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESR----PTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~R----Pt~~ev~~~l~~~~~~~~ 663 (667)
+..+++..-+..+|++| -.+.+|.+|.+|..+.|+
T Consensus 252 ~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~ 290 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE 290 (357)
T ss_pred HHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence 23456667899999999 478899999999888776
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=329.21 Aligned_cols=230 Identities=22% Similarity=0.389 Sum_probs=183.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|...+.||+|||+.||+++. .+|+.||+|++.+..-. .....+...+||++.++|+|||||+++++|++.+..|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 3588899999999999999986 88999999998764322 223345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
.|+|++|+|...+.... ...|+|||..|++|++++++||+|||+|..+..+.....
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 99999999988776322 123459999999999999999999999999887766677
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
+.||||.|+||| +.-.+||||+|||||-|++|++||+...-. ...+ ++ ..-+-.+|..... +
T Consensus 177 TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----ety~-~I-k~~~Y~~P~~ls~------~ 244 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----ETYN-KI-KLNEYSMPSHLSA------E 244 (592)
T ss_pred eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----HHHH-HH-HhcCcccccccCH------H
Confidence 899999999999 455799999999999999999998732210 0111 11 1112233332222 3
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
..+++.+.|+.+|.+|||+++|+.+-||...++.
T Consensus 245 A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p 278 (592)
T KOG0575|consen 245 AKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTP 278 (592)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcC
Confidence 4466778899999999999999999999766655
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-40 Score=306.51 Aligned_cols=222 Identities=25% Similarity=0.398 Sum_probs=170.1
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEE-EEEeCCc-eE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYG-FCSHARH-SI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g-~~~~~~~-~~ 497 (667)
.+|.+.++||+|+||+||++. ..+|..+|.|++.- .-...+..+....|+.+|++++|||||++|+ .+.+..+ .+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f--~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF--GMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch--hhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 467778899999999999995 67899999999862 2334455677999999999999999999999 4444444 89
Q ss_pred EEEEecCCCChHHHhccc--------------------------------cCCcccccccCCeeecCCCceEEecccccc
Q 042735 498 LIYEYLKRGSLATNLSND--------------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~--------------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
||||||.+|+|+..+..- ....|.||||.||.||.+|.||++|||++|
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 999999999998766421 012345999999999999999999999999
Q ss_pred cccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 546 FLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.+......+++.+|||.||+|| |..||||||+||++|||..-++||....- .+. ...+ -....++-
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~----~~L-~~KI---~qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL----LSL-CKKI---EQGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH----HHH-HHHH---HcCCCCCC
Confidence 9988777778899999999999 89999999999999999999999864321 111 1111 12222221
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
+. ..-...+.+++..|++.||+.||+.-.+++.
T Consensus 249 p~--~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 249 PD--EHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred cH--HHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 11 1223356677789999999999984444433
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=311.05 Aligned_cols=171 Identities=27% Similarity=0.461 Sum_probs=147.1
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
...+|+..+.||+|+||+||+|+++ ++..||||.+..... ..+.++....|+.+|+.++|||||+++++++.++..|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 4578888889999999999999874 578899999876432 2345567889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCC------CceEEecccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLE------HKAHVSDFGIAKFL 547 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~------~~~kl~DFGla~~~ 547 (667)
+|||||.||+|.++++.... ..|+||||+||||+.. -.+||+|||+||.+
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999999876521 1245999999999864 35899999999998
Q ss_pred cCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCC
Q 042735 548 KPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 548 ~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
.+. ....+.||+|.||||| |+.|+|+||.|+|+|||+||+.||+
T Consensus 166 ~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 166 QPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred Cch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 754 3456789999999999 8999999999999999999999986
No 11
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-36 Score=363.16 Aligned_cols=305 Identities=33% Similarity=0.479 Sum_probs=152.5
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+++|++|+|++|.+++.+|. ..+++|++|+|++|.+++..|..++++++|++|+|++|.+.+.+|..+.. .+|++|+
T Consensus 117 l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 194 (968)
T PLN00113 117 SSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLT 194 (968)
T ss_pred CCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeee
Confidence 34555555555555554443 23455555555555555455555555555555555555554445544444 2355555
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+.+.+|..+..+.+|+.|++++|++.+.+|..+.++++|++|+|++|++++.+|..++.+++|++|++++|.+.+
T Consensus 195 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 274 (968)
T PLN00113 195 LASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSG 274 (968)
T ss_pred ccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeec
Confidence 55555555555555555555555555555554455555555555555555555544444445555555555555555444
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
.+|..+..+++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..++.
T Consensus 275 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 275 PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred cCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhC
Confidence 44444444455555555555444444444444444444444444444444444444444444444444444444444444
Q ss_pred CCCCCeeeccCCcC------------------------CccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEE
Q 042735 241 LTKLEFLNLSTNRF------------------------SSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELE 296 (667)
Q Consensus 241 l~~L~~L~Ls~N~l------------------------~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~ 296 (667)
+++|+.|++++|++ .+.+|..+..+++|+.|++++|++.+.+|..+..++.|+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 44444444444444 444444444444555555555554444555555555555555
Q ss_pred CcCCCCCCcCcc
Q 042735 297 LSHNFLGREIPS 308 (667)
Q Consensus 297 l~~n~l~~~ip~ 308 (667)
+++|.+.+.+|.
T Consensus 435 Ls~N~l~~~~~~ 446 (968)
T PLN00113 435 ISNNNLQGRINS 446 (968)
T ss_pred CcCCcccCccCh
Confidence 555555444444
No 12
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=306.24 Aligned_cols=223 Identities=27% Similarity=0.430 Sum_probs=178.4
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|...+.||+|.||.||+|.. ..++.||+|.+.-....+ +.+...+|+.++++++|+||.++||.+..+..+|++|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d---eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED---EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcch---hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 456668899999999999975 668899999987544333 3456789999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|||.+|++.+.|..... ..|.|||+.|||+..+|.+|++|||++..+........+
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 99999999887764432 124499999999999999999999999988776666678
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
++|||.||||| |+.|+||||+|++.+||++|.+|+..... +++-..+....|+.... .....+
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP---------mrvlflIpk~~PP~L~~--~~S~~~ 239 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP---------MRVLFLIPKSAPPRLDG--DFSPPF 239 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc---------ceEEEeccCCCCCcccc--ccCHHH
Confidence 99999999999 88999999999999999999999753221 22222222222222111 223357
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+++..|++++|+.||++.+++++-+-.
T Consensus 240 kEFV~~CL~k~P~~RpsA~~LLKh~FIk 267 (467)
T KOG0201|consen 240 KEFVEACLDKNPEFRPSAKELLKHKFIK 267 (467)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhhHHHH
Confidence 7888899999999999999999986654
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-36 Score=326.82 Aligned_cols=226 Identities=24% Similarity=0.446 Sum_probs=172.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.+....+.||+|+||+||+|+... ...||||.+++... ...+++|.||+++++.++|||||+++|+|.+++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~---~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE---NQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc---HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 345567789999999999997532 45699999987532 335678999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC-------C-------------------------------cccccccCCeeecCCCce
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-------A-------------------------------EELDISSKNVLLDLEHKA 536 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-------~-------------------------------~~~dlk~~NiLld~~~~~ 536 (667)
..++|+|||..|||.++|..... . -|.||.++|+|+.++..|
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEE
Confidence 99999999999999999853210 0 023999999999999999
Q ss_pred EEecccccccccCCCCCcccc---cccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhh
Q 042735 537 HVSDFGIAKFLKPDSSNWSAL---VGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 537 kl~DFGla~~~~~~~~~~~~~---~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~ 606 (667)
||+|||++|-.-.. .++... .=..+||||| |+.+||||||||||||+.| |+.||...+ ..+++..
T Consensus 643 KIsDfGLsRdiYss-DYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS----n~EVIe~ 717 (774)
T KOG1026|consen 643 KISDFGLSRDIYSS-DYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS----NQEVIEC 717 (774)
T ss_pred Eecccccchhhhhh-hhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc----hHHHHHH
Confidence 99999999853221 111111 1246899999 6889999999999999998 999986443 2233322
Q ss_pred hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 607 RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
. .+.++.+ .++ .+..++.++|..||+.+|.+||++.||-..|......
T Consensus 718 i----~~g~lL~-~Pe--~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 718 I----RAGQLLS-CPE--NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred H----HcCCccc-CCC--CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 2 1222221 122 2344688899999999999999999999998876554
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=298.12 Aligned_cols=232 Identities=25% Similarity=0.401 Sum_probs=179.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+...+||.|..++||+|+. +.++.||||++.-.... .+.+...+|+..|+.++|||||+++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 5788889999999999999974 77899999998754332 2356788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc--------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSND--------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~--------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|.||.+|++.+.+... ....|+|||+.|||||.+|.|||+|||++..+......
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999998876431 12235699999999999999999999998866543211
Q ss_pred ---c-ccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC-C---C
Q 042735 554 ---W-SALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR-L---P 617 (667)
Q Consensus 554 ---~-~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~---~ 617 (667)
. .+++||+.||||| |+.|+|||||||+..||++|..||... +...+.-+.+.. +|. + .
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~----pPmkvLl~tLqn--~pp~~~t~~ 256 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY----PPMKVLLLTLQN--DPPTLLTSG 256 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC----ChHHHHHHHhcC--CCCCccccc
Confidence 1 5679999999999 789999999999999999999998632 111111111111 110 0 0
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+..+.......+.+++..|+++||++|||+++++++.||....
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 01111222334677888999999999999999999999998543
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=312.72 Aligned_cols=227 Identities=24% Similarity=0.431 Sum_probs=178.4
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|..-..||+|+.|.||.|+ ..++..||||++..... ...+-...|+.+|+..+|+|||.++..|...+++|.|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q----~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ----PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC----CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 345556779999999999996 56788899999875432 1234578999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc-----------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSND-----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||||++|+|.+.+... ....|+|||++|||++.+|.+||+|||++..........++
T Consensus 349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999998765432 12346699999999999999999999999988777666778
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+|||+||||| |..|+||||+|++++||+.|++||-.....+ .. ..+..--.|.+..+ ......+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr---Al--yLIa~ng~P~lk~~----~klS~~~ 499 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---AL--YLIATNGTPKLKNP----EKLSPEL 499 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH---HH--HHHhhcCCCCcCCc----cccCHHH
Confidence 99999999999 8899999999999999999999974321111 00 01111111222221 1223457
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.++..+||+.||++||++.|+++|.++..-
T Consensus 500 kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 500 KDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred HHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 788899999999999999999999988543
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=307.48 Aligned_cols=236 Identities=26% Similarity=0.349 Sum_probs=178.4
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.++||+...+||+|+||.||.|+. .+|..+|+|++++..- ......+....|-++|...++|.||++|..|.+.+.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M-~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM-LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH-HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 368999999999999999999976 4588999999876422 11223456889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccC----
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP---- 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~---- 549 (667)
|||||++||++...|.... ...|.||||+|+|||..|++||+||||++.+..
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~ 297 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI 297 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence 9999999999988776432 123559999999999999999999999964311
Q ss_pred -------------------CCC----C--------------------cccccccccccCCC------CCCCchHHHHHHH
Q 042735 550 -------------------DSS----N--------------------WSALVGTYRYVAPD------YRKKCDVYSFRVL 580 (667)
Q Consensus 550 -------------------~~~----~--------------------~~~~~Gt~~y~aPE------~~~~~DV~sfGvv 580 (667)
+.. . +...+|||.||||| |+..+|+||+|||
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI 377 (550)
T ss_pred hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence 000 0 12358999999999 7889999999999
Q ss_pred HHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCC---CHHHHHHHHHH
Q 042735 581 ALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRP---TMQTITQQLLF 657 (667)
Q Consensus 581 l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RP---t~~ev~~~l~~ 657 (667)
||||+.|.+||...........+.+.+ ..+ ..|...+ ...+..+++.+|+. ||++|- .++||.+|.||
T Consensus 378 myEmLvGyPPF~s~tp~~T~rkI~nwr--~~l--~fP~~~~----~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQETYRKIVNWR--ETL--KFPEEVD----LSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFF 448 (550)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHh--hhc--cCCCcCc----ccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcc
Confidence 999999999986332111111111111 111 1111111 11355678889888 999995 59999999999
Q ss_pred hhhhhcc
Q 042735 658 SLVYFSY 664 (667)
Q Consensus 658 ~~~~~~~ 664 (667)
..+.|+.
T Consensus 449 ~~v~W~~ 455 (550)
T KOG0605|consen 449 KGVDWDH 455 (550)
T ss_pred ccCCcch
Confidence 9998874
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=298.33 Aligned_cols=227 Identities=26% Similarity=0.428 Sum_probs=168.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--ceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR--HSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~--~~~ 497 (667)
.++...+.||+|+||.||++... +|...|||.+..... ...+...+|+.+|.+++|||||+++|...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 34667788999999999999864 488999998765311 11456889999999999999999999855444 688
Q ss_pred EEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecC-CCceEEecccccccccCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDL-EHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~-~~~~kl~DFGla~~~~~~~ 551 (667)
+.|||+++|+|.+.+..... ..|.||||+|||++. ++.+||+|||+++......
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999999999998765431 123499999999999 7999999999999766311
Q ss_pred ---CCcccccccccccCCCC-----CC--CchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 ---SNWSALVGTYRYVAPDY-----RK--KCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ---~~~~~~~Gt~~y~aPE~-----~~--~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.......||+.|||||. .. ++||||+||++.||+||++||... ........... ..-..|.+|...+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig-~~~~~P~ip~~ls 249 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIG-REDSLPEIPDSLS 249 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHh-ccCCCCCCCcccC
Confidence 12335789999999993 23 899999999999999999998642 00111111111 1111233333222
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. ...+++.+|+..+|++||||++++++.+....
T Consensus 250 ~------~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 250 D------EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred H------HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 2 34578889999999999999999999887543
No 18
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=313.77 Aligned_cols=233 Identities=22% Similarity=0.348 Sum_probs=181.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCce
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~ 496 (667)
.+++|...++||+|+||+|++|+++ +++.+|||.+++..-.. ..+.+..+.|.+++.-.. ||.++.++++|.+.++.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 4578999999999999999999875 47789999998764332 234567888988887665 99999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|.||||+.||++..+.+.+.. ...+|||-+|||||.+|++||+|||++|...-....
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~ 524 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR 524 (694)
T ss_pred EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence 999999999997554443321 113499999999999999999999999976644456
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
++++||||.||||| |+..+|+|||||+||||+.|+.||...+.. .+.+..+. .++..|... .
T Consensus 525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe----e~FdsI~~--d~~~yP~~l------s 592 (694)
T KOG0694|consen 525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE----EVFDSIVN--DEVRYPRFL------S 592 (694)
T ss_pred cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHhc--CCCCCCCcc------c
Confidence 77899999999998 899999999999999999999998744321 11111111 122333222 2
Q ss_pred HHHHHHHHhccccCCCCCCCH-----HHHHHHHHHhhhhhcc
Q 042735 628 ISIMEVAFSCLDVSPESRPTM-----QTITQQLLFSLVYFSY 664 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~-----~ev~~~l~~~~~~~~~ 664 (667)
.+.+.++.+-+.++|++|--+ .+|.++.+|....|+.
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred HHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 245667789999999999664 7899999999888763
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=306.98 Aligned_cols=229 Identities=23% Similarity=0.347 Sum_probs=181.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||||+. .+.+.||+|.+.+.... .++.+...+|++++++++|||||.++++|+...+.|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~--~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN--EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc--hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 4566778899999999999975 45678999988765432 34567789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
.||+.| +|+..|..+... .+.|+||+|||++..|++|+||||+||.+.......+
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 999998 999988765321 1239999999999999999999999998876666667
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccc-cCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEM-LDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 628 (667)
.+.|||.||||| |+..+|.||+|||+||+.+|++||-..+ +... +..+ -|+..++. ....
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-------i~~L-v~~I~~d~v~~p~-----~~S~ 225 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-------ITQL-VKSILKDPVKPPS-----TASS 225 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-------HHHH-HHHHhcCCCCCcc-----cccH
Confidence 789999999999 7889999999999999999999974211 1111 1111 23332222 1223
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccC
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYA 665 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~ 665 (667)
.+..+...-+.+||.+|-|-.+++.|.+-....+...
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~ 262 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAE 262 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhc
Confidence 4566777889999999999999999998887666543
No 20
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=302.52 Aligned_cols=220 Identities=29% Similarity=0.459 Sum_probs=168.6
Q ss_pred CCcCHHHHHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEE
Q 042735 409 GKFDYVEIIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYG 488 (667)
Q Consensus 409 ~~~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g 488 (667)
+.+.+++|. ..+.+|+|+-|.||+|+++ ++.|||||++.- -..+|+-|++|+||||+.|.|
T Consensus 119 WeiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-----------kETdIKHLRkLkH~NII~FkG 179 (904)
T KOG4721|consen 119 WEIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-----------KETDIKHLRKLKHPNIITFKG 179 (904)
T ss_pred ccCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhh-----------hhhhHHHHHhccCcceeeEee
Confidence 345566653 3467999999999999995 456999987531 125788899999999999999
Q ss_pred EEEeCCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEeccccc
Q 042735 489 FCSHARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 489 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
+|.....++||||||+.|-|...|..... ..|.|||+-||||..+..+||+|||.+
T Consensus 180 VCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 180 VCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred eecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccch
Confidence 99999999999999999999988865421 124499999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
+..... .....++||..||||| ..+|+||||||||||||+||..||..++.. .++...-...+.-.+|.
T Consensus 260 ~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwGVGsNsL~LpvPs 334 (904)
T KOG4721|consen 260 KELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWGVGSNSLHLPVPS 334 (904)
T ss_pred Hhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEeccCCcccccCcc
Confidence 976644 3445689999999999 467999999999999999999998643321 11111111222222333
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+++ -+.-++.+||+..|..||+|.+|+.|+.-.
T Consensus 335 tcP~------GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 335 TCPD------GFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cCch------HHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 3333 234466799999999999999999997643
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-36 Score=302.75 Aligned_cols=233 Identities=25% Similarity=0.371 Sum_probs=182.9
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCc
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARH 495 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~ 495 (667)
+...||..++.||+|+|++||+|+. ..++.+|||++.+..-..+ ...+-..+|-.+|.+| .||.||+||-.|.++..
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike-~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKE-KKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhh-cccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3457899999999999999999964 6688999999876543221 1233466888999999 79999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
+|.|+||+++|+|.+.+.+-. ...|+||||+|||||.||++||+|||-|+.+.+..
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999999988775421 23456999999999999999999999999876432
Q ss_pred C-----------C--cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc
Q 042735 552 S-----------N--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 552 ~-----------~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
. . ..+++||..|++|| .+..+|+|+||||+|+|+.|++||...........+ ..+
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI------~~l 302 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI------QAL 302 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH------HHh
Confidence 1 1 14589999999999 356899999999999999999998754432211111 112
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
+-.+++..++ .+.+++.+-|..||.+|+|.+||.+|.+|..+.|+
T Consensus 303 ~y~fp~~fp~------~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 303 DYEFPEGFPE------DARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred cccCCCCCCH------HHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 3344444443 34566778899999999999999999999999886
No 22
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=283.45 Aligned_cols=236 Identities=22% Similarity=0.369 Sum_probs=176.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|+....+|+|+||+||+++.+ +|+.||||++.... ++....+-.+|||+.+++++|||+|.++.+|...+..++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35677788999999999999865 58899999987532 2334456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcc------------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSN------------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~------------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
+|||+..-|.+.-.. .....|.||||+|||++.+|.+||||||+||.+......+|
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 999987544332111 11234569999999999999999999999999886666678
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh------hhhcccc-------CCC
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN------MRLDEML-------DPR 615 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~------~~~~~~~-------~~~ 615 (667)
..+.|..|-||| |...+||||.||++.||+||.+-|...+++-....+.. .+...++ .-+
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 889999999999 78899999999999999999987654333211100000 0000111 112
Q ss_pred CCCCCC-c-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 616 LPPPSP-D-----VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 616 ~~~~~~-~-----~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+|.+.. + ......-+++++..|+..||++|++-+|++.+.+|.
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 222211 1 111223577899999999999999999999998883
No 23
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=285.83 Aligned_cols=221 Identities=27% Similarity=0.423 Sum_probs=179.3
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|++...+|+|+||.||+|.+ .+|..+|+|++... .+.+++.+|+.+|.+.+.|++|++||.|.....+|+|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 55667899999999999965 67899999997642 245679999999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc--CC-----------------------cccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA--AA-----------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~--~~-----------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||..|+..+.++... .. .|.|||+.|||+..+|.+|++|||+|..+........+
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNT 188 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNT 188 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCc
Confidence 999999988765321 11 13499999999999999999999999987766666678
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
+.|||.||||| |+.++||||+|++..||..|++|+.... .++..-++.-..|+..........++
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH---------PMRAIFMIPT~PPPTF~KPE~WS~~F 259 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH---------PMRAIFMIPTKPPPTFKKPEEWSSEF 259 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc---------ccceeEeccCCCCCCCCChHhhhhHH
Confidence 89999999998 8999999999999999999999975322 22222233333333333334455678
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
-+++..|+.+.|++|-|+.++++|.+-.
T Consensus 260 ~DFi~~CLiK~PE~R~TA~~L~~H~Fik 287 (502)
T KOG0574|consen 260 NDFIRSCLIKKPEERKTALRLCEHTFIK 287 (502)
T ss_pred HHHHHHHhcCCHHHHHHHHHHhhhhhhc
Confidence 8999999999999999999999987653
No 24
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7e-34 Score=290.17 Aligned_cols=223 Identities=22% Similarity=0.314 Sum_probs=167.1
Q ss_pred cCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCceEEE
Q 042735 424 DAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH----ARHSILI 499 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~----~~~~~lv 499 (667)
.....||+|++|.||+|.+ +++.||||++..... ......+.|.+|++++++++|||||+++|++.+ ....++|
T Consensus 23 ~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv 100 (283)
T PHA02988 23 YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLI 100 (283)
T ss_pred CCCeEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEE
Confidence 3346799999999999998 577899999865422 222234678899999999999999999999977 3468899
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 99999999998875421 12255999999999999999999999998654322
Q ss_pred ccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 555 SALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 555 ~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
....||+.|+||| |+.++|||||||++|||+||+.||.... ..............+..+...
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~------ 247 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT----TKEIYDLIINKNNSLKLPLDC------ 247 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHhcCCCCCCCCcC------
Confidence 2356899999999 4568999999999999999999986332 111111111111122222111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
...+.+++.+||+.||++||||+|+++.|..-..+
T Consensus 248 ~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~~ 282 (283)
T PHA02988 248 PLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKFY 282 (283)
T ss_pred cHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHhc
Confidence 22467788899999999999999999988764433
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=320.79 Aligned_cols=223 Identities=26% Similarity=0.426 Sum_probs=168.2
Q ss_pred CcCcceeecccCeEEEEEEeCC--C----ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS--K----EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~--~----~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
.+..+.||+|+||.||+|.+.+ + ..||||.+.... +.....+|.+|+.+|++++|||||+++|+|.+....
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~---~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS---SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3456679999999999998744 3 249999887543 234567899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccCC-------------------------------cccccccCCeeecCCCceEEecccccc
Q 042735 497 ILIYEYLKRGSLATNLSNDAAA-------------------------------EELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~~-------------------------------~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
+|++|||++|+|..+|++.+.+ .|.||.++|+||++...|||+|||+||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999999875321 134999999999999999999999999
Q ss_pred cccCCCCCcccccc--cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 546 FLKPDSSNWSALVG--TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 546 ~~~~~~~~~~~~~G--t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
..-...-......+ ...||||| |+.|+|||||||++||++| |..||...+. ..+..... -..++
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n----~~v~~~~~---~ggRL 923 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN----FEVLLDVL---EGGRL 923 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch----HHHHHHHH---hCCcc
Confidence 33221111111112 25899999 6889999999999999999 8888764332 11211111 12344
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+++. .+ ...+.++|..||+.+|++||++..|++++..+.
T Consensus 924 ~~P~-~C---P~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 924 DPPS-YC---PEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred CCCC-CC---ChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 4332 22 225678999999999999999999999776543
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=275.21 Aligned_cols=226 Identities=24% Similarity=0.373 Sum_probs=176.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|+..+.||.|+||+|..++.+ +|..+|+|++.+... ...+..+....|..+|+.+.||++|++++.+.+.+..|+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH-HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 468899999999999999999864 577899998865322 223344567889999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||++||.|+.+|+..+.. ..+|+||+|||+|.+|.+||+|||+|+.+... .
T Consensus 122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r---T 198 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR---T 198 (355)
T ss_pred EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---E
Confidence 99999999999999763211 01399999999999999999999999987533 3
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC--CCCCCCchHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR--LPPPSPDVQGK 626 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 626 (667)
-+.||||.|+||| |..++|.|||||++|||+.|.+||.....+ .+. ..++... .|.....
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----~iY----~KI~~~~v~fP~~fs~---- 266 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----QIY----EKILEGKVKFPSYFSS---- 266 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----HHH----HHHHhCcccCCcccCH----
Confidence 4689999999999 778999999999999999999998643321 111 2222222 2332222
Q ss_pred HHHHHHHHHhccccCCCCC-----CCHHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESR-----PTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~R-----Pt~~ev~~~l~~~~~~~~ 663 (667)
.+.+++..-++.|-.+| +-..+|..|.||..+.|.
T Consensus 267 --~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~ 306 (355)
T KOG0616|consen 267 --DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWE 306 (355)
T ss_pred --HHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHH
Confidence 23445556678888888 456789999999988775
No 27
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-35 Score=268.96 Aligned_cols=225 Identities=26% Similarity=0.400 Sum_probs=177.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
++++|+..+.||+|.||.||.|+. +++-.||+|++.+.. .......+++.+|+++-+.++||||.++||+|.+....|
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq-i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ-ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH-HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 357899999999999999999986 456789999886532 122233567999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccCC--------------------------cccccccCCeeecCCCceEEecccccccccCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAAA--------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~~--------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
+++||.++|++...|++.... .+.|+||+|+|++.++..|++|||.+-..+ .
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~ 176 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--S 176 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--C
Confidence 999999999999998743211 134999999999999999999999997654 3
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....+.|||..|.||| ++.++|+|++||+.||++.|.+||..... ...-.++ ..++-..|...+.
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-----~etYkrI-~k~~~~~p~~is~--- 247 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-----SETYKRI-RKVDLKFPSTISG--- 247 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-----HHHHHHH-HHccccCCcccCh---
Confidence 4456899999999999 68899999999999999999999864331 1111111 1123333332222
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+++.+|+..+|.+|.+..|++.+.|-.
T Consensus 248 ---~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 248 ---GAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred ---hHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 345778899999999999999999998854
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=294.59 Aligned_cols=228 Identities=22% Similarity=0.332 Sum_probs=176.7
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchH-HhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCc
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQI-ADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARH 495 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~ 495 (667)
....|...+.||+|+||+||.|.. .++..||||.+......... ...+...+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 356788899999999999999965 56789999976553221111 23445678999999999 9999999999999999
Q ss_pred eEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCC-CceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLE-HKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~-~~~kl~DFGla~~~~~~ 550 (667)
.|+||||+.+|+|.+.+..... ..|.||||+|||+|.+ +++||+|||++......
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~ 174 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE 174 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence 9999999999999998866211 1245999999999999 99999999999987433
Q ss_pred CCCcccccccccccCCC-------CC-CCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC--CCCCCC
Q 042735 551 SSNWSALVGTYRYVAPD-------YR-KKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP--RLPPPS 620 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-------~~-~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 620 (667)
.....+.|||+.|+||| |+ .++||||+||+||.|++|+.||+..... ... ..+... .+|...
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~----~l~----~ki~~~~~~~p~~~ 246 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP----NLY----RKIRKGEFKIPSYL 246 (370)
T ss_pred CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH----HHH----HHHhcCCccCCCCc
Confidence 34567789999999999 43 5899999999999999999998742210 011 111111 122211
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. ..++..++.+|+..+|.+|+|+.+|+.+.|+..
T Consensus 247 ~-----S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 247 L-----SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred C-----CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 0 224567778999999999999999999999986
No 29
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=305.19 Aligned_cols=237 Identities=24% Similarity=0.488 Sum_probs=183.2
Q ss_pred cCCCcCHHHHHHHHcC---------CcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHH
Q 042735 407 FKGKFDYVEIIRAIND---------FDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIE 473 (667)
Q Consensus 407 ~~~~~~~~~~~~~~~~---------f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~ 473 (667)
+..-++|++=-+|... ..+.++||.|.||.||+|+++- ...||||.++.... .+.+.+|+.|+.
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt---ekqrrdFL~EAs 682 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT---EKQRRDFLSEAS 682 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc---HHHHhhhhhhhh
Confidence 4445666544333333 3455789999999999998743 34699999987654 345678999999
Q ss_pred HHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCChHHHhccccCC-------------------------cccccccCCe
Q 042735 474 ALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSLATNLSNDAAA-------------------------EELDISSKNV 528 (667)
Q Consensus 474 ~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~-------------------------~~~dlk~~Ni 528 (667)
||.+++||||+++-|+....+..+||.|||+||+|..+|+..... -|.||.++||
T Consensus 683 IMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNI 762 (996)
T KOG0196|consen 683 IMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNI 762 (996)
T ss_pred hcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhe
Confidence 999999999999999999999999999999999999999764311 1349999999
Q ss_pred eecCCCceEEecccccccccCCCCC-ccccccc--ccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCC
Q 042735 529 LLDLEHKAHVSDFGIAKFLKPDSSN-WSALVGT--YRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSIL 598 (667)
Q Consensus 529 Lld~~~~~kl~DFGla~~~~~~~~~-~~~~~Gt--~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~ 598 (667)
|++.+-..||+|||++|.+.++... +++..|. .+|.||| ++.+||||||||||||.++ |++|+.. +
T Consensus 763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd----m 838 (996)
T KOG0196|consen 763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD----M 838 (996)
T ss_pred eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc----c
Confidence 9999999999999999988766533 3444453 6899999 5789999999999999665 9999642 3
Q ss_pred CChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 599 PSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.+++.. + .+-++|+|. ++...+.++|+.||++|-.+||.|+||+..|--
T Consensus 839 SNQdVIkaI-e--~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 839 SNQDVIKAI-E--QGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred chHHHHHHH-H--hccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 334444332 1 134555542 334468889999999999999999999987754
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=293.37 Aligned_cols=227 Identities=26% Similarity=0.405 Sum_probs=176.1
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
++.....||+|+||+||+|++.+. ||||++....... +..+.|+.|+..+++-||.||+-|.|||..+.. .||.-
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whGd--VAVK~Lnv~~pt~--~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHGD--VAVKLLNVDDPTP--EQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred Hhhccceeccccccceeecccccc--eEEEEEecCCCCH--HHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence 345678899999999999998544 8999998765543 356789999999999999999999999998877 89999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccC--CCCCc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP--DSSNW 554 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~--~~~~~ 554 (667)
+|+|-+|+.+++... ...|.|||+.||++++++.|||+|||++..-.. .....
T Consensus 468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 999999999887431 112449999999999999999999999965322 22223
Q ss_pred ccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....|..-||||| |+..+||||||||+|||+||..||.. ....+++.+..+..+.+++.......
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi----~~~dqIifmVGrG~l~pd~s~~~s~~-- 621 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI----QNRDQIIFMVGRGYLMPDLSKIRSNC-- 621 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC----CChhheEEEecccccCccchhhhccC--
Confidence 4456888999998 78899999999999999999999862 12233333333444444443333333
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..++.+++..||..++++||.+.+|+.+|.....
T Consensus 622 -pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 622 -PKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -HHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 3356677889999999999999999998776544
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-34 Score=295.95 Aligned_cols=228 Identities=27% Similarity=0.379 Sum_probs=167.6
Q ss_pred cCcceeecccCeEEEEEEeCC--C--ce-EEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 424 DAKYCIGSGRHGSVYRAELPS--K--EF-LAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~--~--~~-~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
...+.||+|+||.||+|++.. + .. ||||..+.... ......++|++|+++|++++|||||++||++.....+++
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~-~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE-LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeeccccc-ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 345789999999999997643 2 23 89998764221 224556789999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+|+||+|.++|..... ..|+||.++|+|++.++.+||+|||+++.-......
T Consensus 239 vmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~ 318 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK 318 (474)
T ss_pred EEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence 9999999999999976431 124599999999999999999999999864321111
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
...-.-...|+||| |+.++|||||||++||+.+ |..|+...... .+........ -+.+.+. . .
T Consensus 319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~~~~--~r~~~~~-~---~ 388 (474)
T KOG0194|consen 319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIVKNG--YRMPIPS-K---T 388 (474)
T ss_pred cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHHhcC--ccCCCCC-C---C
Confidence 10112346899999 7899999999999999999 88887644322 1111110111 1122111 1 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
...+..++.+||..+|++||||.++.+.+.......
T Consensus 389 p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 389 PKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred HHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 224556667999999999999999999988765543
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.7e-33 Score=292.87 Aligned_cols=225 Identities=25% Similarity=0.421 Sum_probs=164.9
Q ss_pred cCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|...+.||+|+||.||+|.. ..+..||||++..... ....+.+.+|++++.++ +|||||+++|+|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT---ASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc---hHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 5688889999999999999964 2346799998864322 22345789999999999 899999999998764
Q ss_pred C-ceEEEEEecCCCChHHHhcccc--------------------------------------------------------
Q 042735 494 R-HSILIYEYLKRGSLATNLSNDA-------------------------------------------------------- 516 (667)
Q Consensus 494 ~-~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 516 (667)
+ ..++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4 5789999999999988775321
Q ss_pred ------------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC--ccccccccccc
Q 042735 517 ------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYV 564 (667)
Q Consensus 517 ------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~ 564 (667)
...|.||||+|||++.++.+||+|||+++........ .....+|+.||
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 243 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence 0113399999999999999999999999865432221 12345678899
Q ss_pred CCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhc
Q 042735 565 APD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSC 637 (667)
Q Consensus 565 aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 637 (667)
||| |+.++|||||||++|||+| |+.||..... ..... ........+..+.. ....+.+++.+|
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~---~~~~~-~~~~~~~~~~~~~~------~~~~l~~li~~c 313 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI---NEEFC-QRLKDGTRMRAPEN------ATPEIYRIMLAC 313 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc---cHHHH-HHHhcCCCCCCCCC------CCHHHHHHHHHH
Confidence 999 5789999999999999997 9999764221 11111 11111111111111 122467888999
Q ss_pred cccCCCCCCCHHHHHHHHHHh
Q 042735 638 LDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 638 l~~~p~~RPt~~ev~~~l~~~ 658 (667)
|+.+|++|||+.|+++.|...
T Consensus 314 l~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 314 WQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred ccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999988754
No 33
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-34 Score=265.69 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=187.9
Q ss_pred HHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCC---Cch-HHhHHHHHHHHHHHHhcC-CCCeeEEEE
Q 042735 415 EIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLP---SDQ-IADQKEFFAEIEALTKIR-HRNIVKFYG 488 (667)
Q Consensus 415 ~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~---~~~-~~~~~~~~~E~~~l~~l~-H~niv~~~g 488 (667)
+-......|+..+++|+|..++|.++.. +++..+|||++..... +.. .+-.+.-.+|+.+++++. ||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 3344567888999999999999998854 5678899998754322 111 222345678999999986 999999999
Q ss_pred EEEeCCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEeccccc
Q 042735 489 FCSHARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 489 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
+|..+...++|+|.|+.|.|+++|.+.-. ..|.|+||+|||+|+++++||+|||+|
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEecccee
Confidence 99999999999999999999999865311 123499999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCC------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
..+.++. ..+..||||+|+||| |...+|.||.|||||.++.|.+||..-.. -..++.++
T Consensus 171 ~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--------mlMLR~Im 241 (411)
T KOG0599|consen 171 CQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--------MLMLRMIM 241 (411)
T ss_pred eccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--------HHHHHHHH
Confidence 9887654 356789999999999 66789999999999999999999742111 11223334
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.....-..+++.+...++.+++.+|++.||.+|-|+.|+++|.||+...
T Consensus 242 eGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 242 EGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred hcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 4445555566666667788999999999999999999999999996543
No 34
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=291.30 Aligned_cols=220 Identities=26% Similarity=0.485 Sum_probs=171.7
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+......||.|.||.||.|.|+. .-.||||.++. +....++|.+|+++|+.++|||+|+++|+|..+...|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-----DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhh-----cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 355667889999999999999865 55799998864 235567899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
.|||..|+|.++|++.. ...|.||.++|+|+.++..+||+|||++|++..+.
T Consensus 342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-- 419 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-- 419 (1157)
T ss_pred EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc--
Confidence 99999999999987532 11244999999999999999999999999987553
Q ss_pred ccccccc---ccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 554 WSALVGT---YRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 554 ~~~~~Gt---~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
+++..|. +.|.||| |..|+|||+|||+|||+.| |-.||..++. ..+.+.+........++
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---------SqVY~LLEkgyRM~~Pe- 489 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVYGLLEKGYRMDGPE- 489 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---------HHHHHHHhccccccCCC-
Confidence 3444453 6899999 4679999999999999998 7777643321 11112222222111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
++...+.++|++||+.+|.+||+++||-+.++..
T Consensus 490 -GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 490 -GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred -CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 3445788999999999999999999998776543
No 35
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-33 Score=283.57 Aligned_cols=238 Identities=24% Similarity=0.344 Sum_probs=172.0
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~ 497 (667)
+.|+..+.||+|.||.||+|+ ..+|+.||+|++..... +........|||.+|++++|||||++.|...+. ..+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~--~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE--KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC--CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 456777889999999999996 57799999999875432 223345678999999999999999999998876 6899
Q ss_pred EEEEecCCCChHHHhccc-------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 498 LIYEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||+|||+. ||.-.+... ....|.|||++|||||.+|.+||+|||+|+++.....
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 99999996 665554432 1223559999999999999999999999998765543
Q ss_pred -CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC---------ChhhhhhhhccccC--
Q 042735 553 -NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP---------SPSVINMRLDEMLD-- 613 (667)
Q Consensus 553 -~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~---------~~~~~~~~~~~~~~-- 613 (667)
.+|..+-|..|-||| |+.++|+||.||||.||++|++.+.....+.. .+....+....+-.
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 366677899999999 89999999999999999999987642221111 01000000000000
Q ss_pred -CCCCCCCCchH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 614 -PRLPPPSPDVQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 614 -~~~~~~~~~~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.....+..... ......++++...|..||++|.|+.+++++-+|.+.-
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 00001111111 1123456777788999999999999999999985443
No 36
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.9e-33 Score=292.28 Aligned_cols=229 Identities=22% Similarity=0.340 Sum_probs=169.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 34556678999999999999864 67899999985432 223346789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcc--------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 500 YEYLKRGSLATNLSN--------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~--------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
|||+++|+|...... .....|.||||+|||++.++.+||+|||+++.............|
T Consensus 151 ~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 230 (353)
T PLN00034 151 LEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVG 230 (353)
T ss_pred EecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccccccc
Confidence 999999998543211 112235599999999999999999999999876543333345679
Q ss_pred cccccCCCCC-----------CCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 560 TYRYVAPDYR-----------KKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 560 t~~y~aPE~~-----------~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
|..|+|||+. .++|||||||++|||++|+.||...... ....... .......+..+. . ...
T Consensus 231 t~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~~~~~~-~~~~~~~~~~~~---~---~~~ 302 (353)
T PLN00034 231 TIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DWASLMC-AICMSQPPEAPA---T---ASR 302 (353)
T ss_pred CccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHHH-HHhccCCCCCCC---c---cCH
Confidence 9999999942 3799999999999999999998622110 0000000 000000111111 1 122
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
++.+++.+||+.+|++|||+.|++++.|+..-
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 46788889999999999999999999887653
No 37
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=293.93 Aligned_cols=317 Identities=25% Similarity=0.263 Sum_probs=267.4
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
+|++|+++++.+|.++. +|.......+|+.|+|.+|.|+.+..+++..++.|+.|||+.|.|+...-+.|.. .++++|
T Consensus 100 nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L 178 (873)
T KOG4194|consen 100 NLPNLQEVNLNKNELTR-IPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKL 178 (873)
T ss_pred cCCcceeeeeccchhhh-cccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEE
Confidence 57788888888888874 5766566677888888888888777788888999999999999988544445544 779999
Q ss_pred EcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccC
Q 042735 80 ALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFF 159 (667)
Q Consensus 80 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 159 (667)
+|++|.++..-...|..+.+|..|.|+.|+++...+..|.++++|+.|+|..|+|...---.|.++++|+.|.|..|.+.
T Consensus 179 ~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~ 258 (873)
T KOG4194|consen 179 NLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS 258 (873)
T ss_pred eeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc
Confidence 99999998887888888999999999999999888888899999999999999987544567899999999999999998
Q ss_pred CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCccccc
Q 042735 160 GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIG 239 (667)
Q Consensus 160 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 239 (667)
..-.+.|..|.++++|+|..|++...-...+.+|+.|+.|+||+|.+..+-++.+...++|++|+|++|+++...++.|.
T Consensus 259 kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~ 338 (873)
T KOG4194|consen 259 KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFR 338 (873)
T ss_pred cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHH
Confidence 88888999999999999999999877777888999999999999999988889999999999999999999988888999
Q ss_pred CCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccch---hhhcCCCCCEEECcCCCCCCcCcc-cccCCcc
Q 042735 240 SLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPK---ELGKLVQLSELELSHNFLGREIPS-QICSMEC 315 (667)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~---~l~~l~~L~~L~l~~n~l~~~ip~-~~~~~~~ 315 (667)
.|..|+.|+|++|.++..-...|..+++|+.|||++|.+...+.+ .|..|++|+.|++.+|++ +.||. .+.+++.
T Consensus 339 ~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNql-k~I~krAfsgl~~ 417 (873)
T KOG4194|consen 339 VLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQL-KSIPKRAFSGLEA 417 (873)
T ss_pred HHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCcee-eecchhhhccCcc
Confidence 999999999999999887778888899999999999988766654 466788899999999988 44553 3444555
Q ss_pred cccc
Q 042735 316 CEVF 319 (667)
Q Consensus 316 ~~~~ 319 (667)
++-+
T Consensus 418 LE~L 421 (873)
T KOG4194|consen 418 LEHL 421 (873)
T ss_pred ccee
Confidence 5444
No 38
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.1e-32 Score=284.64 Aligned_cols=233 Identities=21% Similarity=0.298 Sum_probs=171.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. ++..+|+|.+.... .....+.+.+|++++++++|||||++++++...+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 57889999999999999999865 57788998876432 123346799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 159 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--cc
Confidence 99999999988764321 1235599999999999999999999999865432 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh-------h----------------
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI-------N---------------- 605 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~-------~---------------- 605 (667)
....||+.|+||| ++.++|||||||++|||+||+.||............. .
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP 239 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccc
Confidence 3467999999999 4678999999999999999999985221100000000 0
Q ss_pred ---------------hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 606 ---------------MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 606 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.....+.... .....++.+++.+||+.||++|||+.|++++.|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPN--GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccccccccchhHHHHHHHHHhCCCcCCCC--ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 0000000000000000 0112357788999999999999999999999998643
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.8e-32 Score=280.41 Aligned_cols=231 Identities=20% Similarity=0.265 Sum_probs=171.2
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.. .+++.+|||++...... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 56778999999999999975 56889999987643211 11223467899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|+++|+|...+.... ...|.||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-TVR 159 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-eec
Confidence 999999987663211 11234999999999999999999999998754322 233
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...||+.||||| |+.++|||||||++|||+||+.||............ .. ......... ... ....
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~---~~~~~~~~~-~~~---~s~~ 231 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEV-DR---RVKEDQEEY-SEK---FSED 231 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHH-HH---HhhcccccC-Ccc---CCHH
Confidence 457999999999 577899999999999999999998643221110011 11 111111110 011 1124
Q ss_pred HHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 630 IMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
+.+++.+||+.+|++||+ +++++++.||....+.
T Consensus 232 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 232 AKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred HHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 567888999999999997 9999999998766554
No 40
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.2e-33 Score=289.48 Aligned_cols=222 Identities=20% Similarity=0.300 Sum_probs=168.0
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
+.||+|+||.||+|+. .+++.+|+|++...... .......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999976 56788999988643211 112345678999999999999999999999999999999999999
Q ss_pred CChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 506 GSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 506 g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|+|.+.+.... ...|.||||+||+++.++.+||+|||+++............+||+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 159 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence 99988775422 112449999999999999999999999986433333344578999
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| |+.++|||||||++|||+||+.||..... ......... -+..++... ...+.+++.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~~~~~~~~~--~~~~~p~~~------~~~~~~li~ 227 (323)
T cd05571 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILM--EEIRFPRTL------SPEAKSLLA 227 (323)
T ss_pred cccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH----HHHHHHHHc--CCCCCCCCC------CHHHHHHHH
Confidence 999999 57789999999999999999999853221 011111110 111222211 124567888
Q ss_pred hccccCCCCCC-----CHHHHHHHHHHhhhh
Q 042735 636 SCLDVSPESRP-----TMQTITQQLLFSLVY 661 (667)
Q Consensus 636 ~Cl~~~p~~RP-----t~~ev~~~l~~~~~~ 661 (667)
+||+.||++|| ++.+++++.||....
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 228 GLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred HHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 99999999999 899999999886543
No 41
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-33 Score=283.41 Aligned_cols=228 Identities=24% Similarity=0.374 Sum_probs=170.7
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
...+.+.||+|.||.|..++...+..||||+++.... ...+++|.+||++|++++|||||+++|+|..++.+.+|+|
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~---~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT---KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccc---hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3456678999999999999998889999999876432 2345789999999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccCCc--------------------------ccccccCCeeecCCCceEEecccccccccCCCCC--
Q 042735 502 YLKRGSLATNLSNDAAAE--------------------------ELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-- 553 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~~~--------------------------~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-- 553 (667)
||++|+|.+++..+.+.. |.|+.+.|||+|.++++||+|||++|.+-.....
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 999999999997652211 2399999999999999999999999965433221
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh--CCCCCCCCccCCCChhhhhhhhccccCCCC-CCCCCchH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK--GKHPRGFVSSILPSPSVINMRLDEMLDPRL-PPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 624 (667)
....+=..+||||| ++.++|||+|||++||+++ .+.||+.... ..+.+ ...++++..- ..-.+...
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~----e~vve-n~~~~~~~~~~~~~l~~P~ 770 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD----EQVVE-NAGEFFRDQGRQVVLSRPP 770 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH----HHHHH-hhhhhcCCCCcceeccCCC
Confidence 11223357999999 7899999999999999876 6678753221 11111 1112222110 00000111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+...+.+++.+||..+.++|||++++...|..
T Consensus 771 ~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 771 ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 223467789999999999999999999887764
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-33 Score=290.70 Aligned_cols=225 Identities=24% Similarity=0.372 Sum_probs=174.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.-|..++.||.|+-|.|..|+. .+|+.+|||.+.+..... ......+.+||.+|+-+.||||+++|+++.+..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s-~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELS-SSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccc-cccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 4567788899999999999976 678999999987653211 12234577999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
.||+++|.|++++..+... -|.|+||+|+|||..+++||+|||+|....+ .....
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-gklLe 169 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP-GKLLE 169 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-Ccccc
Confidence 9999999999988654321 1349999999999999999999999987554 34566
Q ss_pred cccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC--CCCCCCchHHH
Q 042735 556 ALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR--LPPPSPDVQGK 626 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 626 (667)
+.||+|.|.||| | ..++||||.|||||.|+||+.||+... + ...+..+-... +|...+.
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-i-------r~LLlKV~~G~f~MPs~Is~---- 237 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-I-------RVLLLKVQRGVFEMPSNISS---- 237 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-H-------HHHHHHHHcCcccCCCcCCH----
Confidence 789999999999 4 468999999999999999999997221 1 11111111111 2222221
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+..+++.+++..||++|-|++||.+|.|.++..
T Consensus 238 --eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 238 --EAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred --HHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 234667789999999999999999999987643
No 43
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.2e-33 Score=288.41 Aligned_cols=221 Identities=24% Similarity=0.343 Sum_probs=166.9
Q ss_pred ceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|+||.||+++. ..++.+|||.+..............+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 356789999876422111122335678999999999999999999999999999999999
Q ss_pred cCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 503 LKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 503 ~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.............
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC 161 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccC
Confidence 999999887753221 12349999999999999999999999985443333334568
Q ss_pred ccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC--CCCCCCCchHHHHHHH
Q 042735 559 GTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP--RLPPPSPDVQGKLISI 630 (667)
Q Consensus 559 Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 630 (667)
||+.|+||| ++.++|||||||++|||+||+.||...... .. ...+... .+++..+ ..+
T Consensus 162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~----~~----~~~~~~~~~~~~~~~~------~~~ 227 (323)
T cd05584 162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK----KT----IDKILKGKLNLPPYLT------PEA 227 (323)
T ss_pred CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH----HH----HHHHHcCCCCCCCCCC------HHH
Confidence 999999999 467899999999999999999998632211 11 1111111 1222111 245
Q ss_pred HHHHHhccccCCCCCC-----CHHHHHHHHHHhhhh
Q 042735 631 MEVAFSCLDVSPESRP-----TMQTITQQLLFSLVY 661 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~ 661 (667)
.+++.+||+.+|++|| ++++++++.|+....
T Consensus 228 ~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~ 263 (323)
T cd05584 228 RDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVN 263 (323)
T ss_pred HHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCC
Confidence 6788899999999999 899999998876543
No 44
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.9e-33 Score=290.04 Aligned_cols=232 Identities=21% Similarity=0.291 Sum_probs=173.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 36888899999999999999875 578899998864321 1122345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.... ...
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~ 156 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YAN 156 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccC
Confidence 999999999988753211 12349999999999999999999999986543 234
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc-CCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML-DPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 628 (667)
...||+.|+||| |+.++|||||||++|||+||+.||............. ...... .+....+. .....
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~---~~~s~ 231 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK--YWKETLQRPVYDDPR---FNLSD 231 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH--hccccccCCCCCccc---cccCH
Confidence 567999999999 5778999999999999999999986322110000000 000111 11111000 01123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
++.+++.+||..+|++||+++|++++.|+..+.
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 466788899999999999999999999987653
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.3e-32 Score=280.33 Aligned_cols=227 Identities=22% Similarity=0.361 Sum_probs=162.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-----------------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-----------------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-----------------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 483 (667)
++|...+.||+|+||.||+|..++ +..+|+|.+..... ......|.+|++++.+++||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCe
Confidence 467788899999999999997532 23699998765322 2335679999999999999999
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHHhcccc-------------------------------------------CCcc
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATNLSNDA-------------------------------------------AAEE 520 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------~~~~ 520 (667)
|+++|++.+.+..++||||+++|+|.+++.... ...|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999988764321 0113
Q ss_pred cccccCCeeecCCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHhC--CCC
Q 042735 521 LDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKG--KHP 590 (667)
Q Consensus 521 ~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG--~~p 590 (667)
.||||+|||++.++.+||+|||+++....... ......++..||||| ++.++|||||||++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 39999999999999999999999986543221 112345678999999 46789999999999999974 556
Q ss_pred CCCCccCCCChhhhhhhhcc--ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 591 RGFVSSILPSPSVINMRLDE--MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
+................... ......++.. ...+.+++.+||+.+|++||||+||.+.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQVYLFRPPPC------PQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccccccccCCCCC------CHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 54322110000000000000 0001111111 225678889999999999999999988764
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=290.01 Aligned_cols=228 Identities=23% Similarity=0.298 Sum_probs=173.2
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.+|||.+..... ......+.+.+|+.++++++|||||++++++.+++..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 367888999999999999999875 578899998754211 111234568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++..... .
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR---T 172 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC---c
Confidence 9999999999887754321 123499999999999999999999999875432 2
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...+||+.|+||| ++.++|||||||++|||+||+.||...... ... ..+.......+.. . ..
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~----~~i~~~~~~~p~~-~---~~ 240 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIY----EKILAGRLKFPNW-F---DG 240 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHH----HHHhcCCcCCCCC-C---CH
Confidence 3467999999999 467899999999999999999998532211 011 1111111111110 1 12
Q ss_pred HHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
.+.+++.+||+.||++||+ +++++.|.||....++
T Consensus 241 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 241 RARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 3567888999999999997 7999999998765443
No 47
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-33 Score=284.67 Aligned_cols=224 Identities=24% Similarity=0.387 Sum_probs=177.6
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc-eE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH-SI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~-~~ 497 (667)
.++|+..+.+|+|+||.++.++. .++..+++|++.-..... ..++...+|+.++++++|||||.+++.+.+.+. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~--~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE--PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc--hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 35778889999999999999975 456789999887544332 334578899999999999999999999999888 99
Q ss_pred EEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+||+||++++.+.... ...|+|||++||+++.++.|||+|||+||.+.+..
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998775433 12245999999999999999999999999998877
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....+.+|||.||.|| |..|+|+||+||++|||++=+++|...+.. ...........+| ++..
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~----~Li~ki~~~~~~P-lp~~------ 229 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS----ELILKINRGLYSP-LPSM------ 229 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH----HHHHHHhhccCCC-CCcc------
Confidence 6777889999999999 899999999999999999999998744321 1122222222222 2221
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...++..++..|++.+|+.||++.+++.+..
T Consensus 230 ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~ 260 (426)
T KOG0589|consen 230 YSSELRSLVKSMLRKNPEHRPSALELLRRPH 260 (426)
T ss_pred ccHHHHHHHHHHhhcCCccCCCHHHHhhChh
Confidence 2234556777999999999999999998743
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.4e-32 Score=288.01 Aligned_cols=224 Identities=25% Similarity=0.399 Sum_probs=164.6
Q ss_pred cCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|+..+.||+|+||.||+|.. ..+..||||+++.... ....+.+.+|+++++.+ +|||||+++|+|.++
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 4677889999999999999963 2355799998864322 22345789999999999 799999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc---------------------------------------------------------
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA--------------------------------------------------------- 516 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------------------- 516 (667)
+..++||||+++|+|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999988774311
Q ss_pred ------------------------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 517 ------------------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 517 ------------------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
...|.||||+|||++.++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 0113399999999999999999999999865433221
Q ss_pred -cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 554 -WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 554 -~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....++..|+||| |+.++|||||||++|||+| |+.||..... .............+..+...
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~----- 342 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV----DSKFYKMIKEGYRMLSPECA----- 342 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc----hHHHHHHHHhCccCCCCCCC-----
Confidence 11234567899999 5779999999999999998 8888753211 11100111111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..++.+++.+||+.||++||||.||++.+..
T Consensus 343 -~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 343 -PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred -CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1246788899999999999999999999874
No 49
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.3e-33 Score=285.12 Aligned_cols=227 Identities=22% Similarity=0.314 Sum_probs=172.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... +++.+|+|++..... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV-IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH-hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 36788899999999999999864 678899998754211 1112345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++..... ..
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~ 156 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TW 156 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---cc
Confidence 999999999887754321 123499999999999999999999999865432 23
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..+||+.|+||| ++.++|||||||++|||+||+.||..... .......... ...++... ...
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~----~~~~~~i~~~--~~~~~~~~------~~~ 224 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP----FGIYEKILAG--KLEFPRHL------DLY 224 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhC--CcCCCccC------CHH
Confidence 457999999999 57789999999999999999999853221 0111111000 11122211 124
Q ss_pred HHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 630 IMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
+.+++.+||+.||.+||+ ++|++++.|+....|.
T Consensus 225 ~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 225 AKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred HHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 567888999999999995 9999999999765543
No 50
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.3e-33 Score=289.32 Aligned_cols=227 Identities=22% Similarity=0.303 Sum_probs=171.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC--CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS--KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~--~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|.... +..+|+|++...... .....+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-KQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3578889999999999999997543 357999987532111 1123456889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.....
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~--- 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR--- 184 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC---
Confidence 99999999999988754321 123499999999999999999999999875432
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....+||+.||||| ++.++|||||||++|||+||+.||...... .......... ...+...+
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~~~~i~~~~--~~~p~~~~------ 252 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL----LIYQKILEGI--IYFPKFLD------ 252 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH----HHHHHHhcCC--CCCCCCCC------
Confidence 23468999999999 567899999999999999999998632211 1111111111 11222111
Q ss_pred HHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
..+.+++.+|++.+|++|+ +++|++++.||..+.|
T Consensus 253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~ 292 (340)
T PTZ00426 253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW 292 (340)
T ss_pred HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 1355788899999999995 8999999999876544
No 51
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-33 Score=286.50 Aligned_cols=219 Identities=26% Similarity=0.398 Sum_probs=167.6
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|...+.||.|+||.||.|+. .+.+.||||++.-.- .+..+.+..+.+|++.|.+++|||+|.|.|+|......|+|||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySG-KQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-KQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccc-cccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 55567899999999999975 567889999986432 2334557789999999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||-| +-.+.+.... ...|.|||+.|||+.+.|.||++|||-|.+..+. .+
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----ns 181 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----NS 181 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch----hc
Confidence 9975 5555443211 1124499999999999999999999999887654 46
Q ss_pred ccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
++|||+||||| |+-|+||||+||++.|+..+++|...+..+- .. ..+..--.|.++ ..++ .
T Consensus 182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS---AL--YHIAQNesPtLq--s~eW---S 251 (948)
T KOG0577|consen 182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---AL--YHIAQNESPTLQ--SNEW---S 251 (948)
T ss_pred ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH---HH--HHHHhcCCCCCC--Cchh---H
Confidence 89999999999 7899999999999999999999953222110 00 011111123333 2233 3
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+..++..|+++-|.+|||.++++++.|.
T Consensus 252 ~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 356678889999999999999999988764
No 52
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.6e-34 Score=291.44 Aligned_cols=225 Identities=20% Similarity=0.349 Sum_probs=172.2
Q ss_pred CcCcceeecccCeEEEEEEeCCCce-EEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEF-LAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~-~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
+++...||.|+||.||+|..+.... .|.|++... ..+..+.|+-||+||+..+||+||++++.|+..+.+|++.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk----seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK----SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhccc----chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 4455678999999999998766544 555665432 23456789999999999999999999999999999999999
Q ss_pred ecCCCChHHHhcc-------------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSN-------------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~-------------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||.||-+...+.+ .....|.|||+.|||++-+|.+|++|||++...........+
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 9999987654321 112345699999999999999999999999765544445567
Q ss_pred ccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 557 LVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 557 ~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
+.|||+||||| |+.++|||||||+|.||..+.+|......++... .+..--.|.+..| ..
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll-----KiaKSePPTLlqP----S~ 260 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-----KIAKSEPPTLLQP----SH 260 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH-----HHhhcCCCcccCc----ch
Confidence 99999999999 7889999999999999999999976433221110 1111112222222 23
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.++..+|+.++|+.||+++++++|.|+..+
T Consensus 261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred hhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 34467788899999999999999999999998744
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.98 E-value=5.4e-33 Score=287.98 Aligned_cols=220 Identities=23% Similarity=0.325 Sum_probs=165.7
Q ss_pred eecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||.||+|+.. ++..+|+|++...... .......+.+|++++.+++|||||++++++.+.+..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 699999999999864 5778999987542111 12234568899999999999999999999999999999999999999
Q ss_pred hHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccc
Q 042735 508 LATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRY 563 (667)
Q Consensus 508 L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y 563 (667)
|.+.+.... ...|.||||+||+++.++.+||+|||+++............+||+.|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 159 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 159 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence 988775431 11244999999999999999999999998654333334456899999
Q ss_pred cCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhc
Q 042735 564 VAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSC 637 (667)
Q Consensus 564 ~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 637 (667)
+||| |+.++|||||||++|||+||+.||..... .......... ...++... ...+.+++.+|
T Consensus 160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~----~~~~~~~~~~--~~~~~~~~------~~~~~~li~~~ 227 (312)
T cd05585 160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV----NEMYRKILQE--PLRFPDGF------DRDAKDLLIGL 227 (312)
T ss_pred CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH----HHHHHHHHcC--CCCCCCcC------CHHHHHHHHHH
Confidence 9999 57789999999999999999999853221 1111111110 11112111 12456788899
Q ss_pred cccCCCCCC---CHHHHHHHHHHhhhh
Q 042735 638 LDVSPESRP---TMQTITQQLLFSLVY 661 (667)
Q Consensus 638 l~~~p~~RP---t~~ev~~~l~~~~~~ 661 (667)
|+.||++|| ++.|++.+.|+....
T Consensus 228 L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 228 LSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred cCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 999999997 579999998887543
No 54
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.98 E-value=1.7e-32 Score=292.23 Aligned_cols=232 Identities=22% Similarity=0.316 Sum_probs=167.9
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|+..+.||+|+||+||+|+. .++..+|+|++...... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 578889999999999999976 55788999998643211 1223456899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC-----
Q 042735 501 EYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS----- 551 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~----- 551 (667)
||+++|+|.+++.... ...|.||||+|||++.++++||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9999999988775421 11234999999999999999999999986431100
Q ss_pred ------------------------------------------CCcccccccccccCCC------CCCCchHHHHHHHHHH
Q 042735 552 ------------------------------------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALE 583 (667)
Q Consensus 552 ------------------------------------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~E 583 (667)
......+||+.|+||| |+.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e 240 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence 0012357999999999 5778999999999999
Q ss_pred HHhCCCCCCCCccCCCChhhhhhhhcc-ccCCCCCCCCCchHHHHHHHHHHHHh--ccccCCCCCCCHHHHHHHHHHhhh
Q 042735 584 VIKGKHPRGFVSSILPSPSVINMRLDE-MLDPRLPPPSPDVQGKLISIMEVAFS--CLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 584 lltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
|+||+.||..... ......... ......+.... . ..++.+++.+ |+..+|..||+++|++++.||..+
T Consensus 241 lltG~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~-~---s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 241 MLVGQPPFLAPTP-----TETQLKVINWENTLHIPPQVK-L---SPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHhCCCCCcCCCH-----HHHHHHHHccccccCCCCCCC-C---CHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 9999999863221 111011100 00111221111 1 1133445544 777788889999999999999766
Q ss_pred hhc
Q 042735 661 YFS 663 (667)
Q Consensus 661 ~~~ 663 (667)
.+.
T Consensus 312 ~~~ 314 (381)
T cd05626 312 DFS 314 (381)
T ss_pred Chh
Confidence 543
No 55
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.98 E-value=2.6e-32 Score=284.62 Aligned_cols=223 Identities=21% Similarity=0.318 Sum_probs=168.0
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
+.||+|+||.||+|+. .++..+|||++...... .......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII-AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999976 46789999988643221 122345788999999999999999999999999999999999999
Q ss_pred CChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 506 GSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 506 g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|+|...+.... ...|.||||+|||++.++.+||+|||+++............+||+
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 159 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP 159 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence 99987764321 112349999999999999999999999986433333334568999
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| |+.++|||||||++|||+||+.||..... ........ ..+..++...+ ..+.+++.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~----~~~~~~~~--~~~~~~p~~~~------~~~~~li~ 227 (328)
T cd05593 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELIL--MEDIKFPRTLS------ADAKSLLS 227 (328)
T ss_pred CccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH----HHHHHHhc--cCCccCCCCCC------HHHHHHHH
Confidence 999999 46789999999999999999999853221 01111110 01122222211 24567888
Q ss_pred hccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 636 SCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 636 ~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
+||+.+|++|| ++.|++++.||....+
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 228 GLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred HHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 99999999997 8999999988865433
No 56
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=7.7e-32 Score=281.72 Aligned_cols=233 Identities=21% Similarity=0.317 Sum_probs=170.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|.+..... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 57889999999999999999865 577888887754321 23345789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++..... ..
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~ 159 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--cc
Confidence 99999999988764321 1224499999999999999999999999765332 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC----------Chhhh--hh----------
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP----------SPSVI--NM---------- 606 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~----------~~~~~--~~---------- 606 (667)
....||..|+||| ++.++|||||||++|||++|+.||........ ..... ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLS 239 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhh
Confidence 3457999999999 46789999999999999999999753211000 00000 00
Q ss_pred --------------hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 --------------RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..........+..... ....++.+++.+||+.||++|||+.|++++.|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 240 SYGPDSRPPMAIFELLDYIVNEPPPKLPSG--VFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhcccccccccHHHHHHHHhcCCCccCCCC--CcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000000000000000 011246788999999999999999999999998654
No 57
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1.9e-32 Score=286.71 Aligned_cols=232 Identities=22% Similarity=0.313 Sum_probs=170.8
Q ss_pred CCcCcceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCce
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~ 496 (667)
+|+..+.||+|+||.||+|+. .++..+|+|++............+.+.+|+.++.+++ ||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477888999999999999975 3578899998764322122233456889999999995 99999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC-
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS- 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~- 551 (667)
++||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 99999999999988774321 11244999999999999999999999998653322
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
......+||+.||||| ++.++|||||||++|||+||+.||....... .......... ..++..+...+
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~--- 235 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRRIL-KCDPPFPSFIG--- 235 (332)
T ss_pred CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHHHh-cCCCCCCCCCC---
Confidence 2233467999999999 3568999999999999999999986322111 1111111111 11222222211
Q ss_pred HHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVY 661 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.||++|| ++++++++.|+....
T Consensus 236 ---~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 236 ---PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred ---HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 2456788899999999999 888999998876543
No 58
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.98 E-value=3.2e-32 Score=281.19 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=168.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.+|||++...... .....+.+|+.++++++|||||++++++.+.+..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 367888999999999999999875 6788999988643221 122357789999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||++ |+|.+.+.... ...|.||||+|||++.++.+||+|||+++........
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence 999996 56665553321 1123499999999999999999999999865433333
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhh-----------c--cccC
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRL-----------D--EMLD 613 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-----------~--~~~~ 613 (667)
.....||+.|+||| |+.++||||+||++|||+||+.||................. . ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 34567899999999 35578999999999999999999864321100000000000 0 0000
Q ss_pred C-CCCCCCCc-hHH------HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 614 P-RLPPPSPD-VQG------KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 614 ~-~~~~~~~~-~~~------~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+ ......+. ... ....+.+++.+|++.||++|||+.|++++.||..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 0 00000000 000 01245678889999999999999999999998654
No 59
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1e-32 Score=269.69 Aligned_cols=221 Identities=21% Similarity=0.333 Sum_probs=172.4
Q ss_pred CCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.+|+|.||.|-+|. ...|+.||||.+++..-. ...+...+.+||+||+.++||||+++|.+|+..+.+.|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 45666789999999999996 578999999988764332 2344567889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||..+|+|++++.+.+.. .|.|||.+|||+|.++++||+|||++-.+... ...++
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-kfLqT 211 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-KFLQT 211 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc-cHHHH
Confidence 999999999998764321 13499999999999999999999999877643 45678
Q ss_pred ccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC-CCCchHHHHH
Q 042735 557 LVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP-PSPDVQGKLI 628 (667)
Q Consensus 557 ~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 628 (667)
+||+|-|.+|| | ...+|.||+||+||-|+.|..||+..+... .++.+-...... +.+..
T Consensus 212 FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--------lvrQIs~GaYrEP~~PSd----- 278 (668)
T KOG0611|consen 212 FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--------LVRQISRGAYREPETPSD----- 278 (668)
T ss_pred hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--------HHHHhhcccccCCCCCch-----
Confidence 99999999999 3 468999999999999999999998543211 111221111111 11111
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...++..++..+|++|.|..+|..+-|.-
T Consensus 279 -A~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 279 -ASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -HHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 12344567889999999999999987753
No 60
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.98 E-value=3e-32 Score=283.72 Aligned_cols=223 Identities=20% Similarity=0.296 Sum_probs=167.4
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
+.||+|+||.||+|+. .++..||+|++...... .......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3689999999999976 46789999988643211 112345678899999999999999999999999999999999999
Q ss_pred CChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 506 GSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 506 g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|+|...+..... ..|.||||+|||++.++.+||+|||+++.............||+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 159 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence 999877653321 12349999999999999999999999986433333334567999
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| |+.++|||||||++|||+||+.||...... ........ ....++...+ ..+.+++.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~~~~--~~~~~p~~~~------~~~~~li~ 227 (323)
T cd05595 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELILM--EEIRFPRTLS------PEAKSLLA 227 (323)
T ss_pred CcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHhc--CCCCCCCCCC------HHHHHHHH
Confidence 999999 467899999999999999999998532211 01111100 1112222211 24567888
Q ss_pred hccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 636 SCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 636 ~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
+||+.+|++|| ++.+++++.||....+
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 228 GLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred HHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 99999999998 8999999988876543
No 61
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=9.9e-33 Score=275.84 Aligned_cols=232 Identities=22% Similarity=0.290 Sum_probs=171.5
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCC----------CchHHhHHHHHHHHHHHHhcCCCCeeEE
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLP----------SDQIADQKEFFAEIEALTKIRHRNIVKF 486 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~----------~~~~~~~~~~~~E~~~l~~l~H~niv~~ 486 (667)
..++.|+....||+|.||.|-+|+. .+++.||||++.+... .+.....+...+||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3568899999999999999999975 5688999998865321 1111123578899999999999999999
Q ss_pred EEEEEeC--CceEEEEEecCCCChHH-------------------------HhccccCCcccccccCCeeecCCCceEEe
Q 042735 487 YGFCSHA--RHSILIYEYLKRGSLAT-------------------------NLSNDAAAEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 487 ~g~~~~~--~~~~lv~ey~~~g~L~~-------------------------~l~~~~~~~~~dlk~~NiLld~~~~~kl~ 539 (667)
+.+..++ +..|||+|||..|.+.. +|+. +...|.||||+|+||+++|+|||+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEcCCCcEEee
Confidence 9999775 57999999999997632 1111 233466999999999999999999
Q ss_pred cccccccccCCC-----CCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh
Q 042735 540 DFGIAKFLKPDS-----SNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI 604 (667)
Q Consensus 540 DFGla~~~~~~~-----~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~ 604 (667)
|||++-...... ......+|||.+||||. ..+.||||+||+||-|+.|+.||.......
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~------ 326 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE------ 326 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH------
Confidence 999998763321 12334689999999992 346899999999999999999985322111
Q ss_pred hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 605 NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....++...+..+ +..+.-..+.+++.+.|++||++|.+..+|..|+|....
T Consensus 327 --l~~KIvn~pL~fP--~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 327 --LFDKIVNDPLEFP--ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred --HHHHHhcCcccCC--CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 1112222222111 111222346678889999999999999999999987544
No 62
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=1.4e-32 Score=291.15 Aligned_cols=236 Identities=22% Similarity=0.297 Sum_probs=174.3
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..++|+..+.||+|+||.||+|+.. ++..+|+|++...... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-KRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3468889999999999999999864 5788999987532111 1122345789999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 498 LIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
+||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++....... .
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence 99999999999887754221 12449999999999999999999999987543321 2
Q ss_pred cccccccccccCCC----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 554 WSALVGTYRYVAPD----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
....+||+.||||| |+.++|||||||++|||+||+.||...... ...............+...
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~--- 272 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMDHKNSLTFPDDI--- 272 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHHHHHHcCCCcCCCCCcC---
Confidence 23567999999999 356899999999999999999998633211 1111111000011112111
Q ss_pred HHHHHHHHHHHHhccccCCCC--CCCHHHHHHHHHHhhhhhc
Q 042735 624 QGKLISIMEVAFSCLDVSPES--RPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~--RPt~~ev~~~l~~~~~~~~ 663 (667)
.....+.+++.+|++.+|++ |||++|++++.|+....+.
T Consensus 273 -~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 273 -EISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred -CCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 11234567888999999987 9999999999998765443
No 63
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.98 E-value=6.1e-32 Score=286.64 Aligned_cols=225 Identities=25% Similarity=0.404 Sum_probs=165.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|+..+.||+|+||.||+|... ++..||||++..... ....+.+.+|+++++++ +|||||+++|+|.+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 47888899999999999998642 235799999865432 22345788999999999 899999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc---------------------------------------------------------
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA--------------------------------------------------------- 516 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------------------- 516 (667)
+..++||||+++|+|.+++....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 99999999999999988774311
Q ss_pred -------------------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC--cccc
Q 042735 517 -------------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN--WSAL 557 (667)
Q Consensus 517 -------------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~--~~~~ 557 (667)
...|.||||+|||+++++.+||+|||+++........ ....
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 0113399999999999999999999999865433211 1123
Q ss_pred cccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 558 VGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 558 ~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+++.||||| |+.++|||||||++|||++ |+.||...... ..... .......+..+... ..++
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---~~~~~-~~~~~~~~~~~~~~------~~~l 344 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---SKFYK-MVKRGYQMSRPDFA------PPEI 344 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc---HHHHH-HHHcccCccCCCCC------CHHH
Confidence 3567899999 5779999999999999997 99997532211 00000 01111111111111 1356
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+++.+||+.+|++|||+.+|++.+...
T Consensus 345 ~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7788899999999999999999988753
No 64
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.98 E-value=1.9e-31 Score=268.41 Aligned_cols=219 Identities=26% Similarity=0.457 Sum_probs=164.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|++.++..+|+|.+.... ...+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 4678888999999999999999888889999875321 12356889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++....... ..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 99999999988753211 11349999999999999999999999986543221 11
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....++..|+|||+ +.++|||||||++|||+| |+.||..... ....... ... .....+. . ..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~~~~i-~~~--~~~~~~~-~---~~ 227 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEVVEMI-SRG--FRLYRPK-L---AS 227 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH-HCC--CCCCCCC-C---CC
Confidence 22345678999993 568999999999999999 8989753221 1111111 110 0111111 1 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..+.+++.+||+.+|++||+|+|+++.|
T Consensus 228 ~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 228 MTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 3567889999999999999999999876
No 65
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.98 E-value=6.5e-32 Score=276.65 Aligned_cols=234 Identities=18% Similarity=0.265 Sum_probs=166.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|+.. ++..||+|++...... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 357888899999999999999764 5788999988643221 123457899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+++ +|.+.+.... ...|.||||+|||++.++.+||+|||+++........
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 9999985 8877664321 1123499999999999999999999999865433333
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC---------CC-hhhh-h-----hhhcc
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL---------PS-PSVI-N-----MRLDE 610 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~---------~~-~~~~-~-----~~~~~ 610 (667)
.....||+.|+||| |+.++||||+||++|||+||+.||....... .. .... . .....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 34467899999999 3567999999999999999999985321100 00 0000 0 00000
Q ss_pred ccCCCCCCCC--CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 611 MLDPRLPPPS--PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 611 ~~~~~~~~~~--~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+...... ........+..+++.+|++.||.+|||++|++++.||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0001000000 0000111245688889999999999999999998765
No 66
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.98 E-value=5.2e-32 Score=277.63 Aligned_cols=221 Identities=25% Similarity=0.446 Sum_probs=166.5
Q ss_pred CcCcceeecccCeEEEEEEeCC---Cc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS---KE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~---~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
....++||.|.||.||+|.+.+ |+ -||||..+..... ...+.|.+|+-+|++++|||||+++|+|.+. ..|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~---d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP---DDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh---hhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 3455779999999999998643 33 4888887664443 3356799999999999999999999999764 689
Q ss_pred EEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||.++-|.|..+|..... ..|.||.++|||+.....+|++|||++|.+..+.
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~- 545 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA- 545 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc-
Confidence 99999999999999875431 1244999999999999999999999999887543
Q ss_pred Ccccccc--cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 553 NWSALVG--TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 553 ~~~~~~G--t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.+++..| ...||||| ++.+||||-|||.+||++. |..||..+..- .++ ..++..-....|+.+
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs----DVI-~~iEnGeRlP~P~nC--- 617 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS----DVI-GHIENGERLPCPPNC--- 617 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc----ceE-EEecCCCCCCCCCCC---
Confidence 3333344 36899999 6789999999999999876 99998643321 111 111111112222222
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+..++.+||+.+|.+||++.|+...|..+.
T Consensus 618 ---Pp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 618 ---PPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred ---ChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 235667888999999999999999998876653
No 67
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=7.4e-32 Score=285.49 Aligned_cols=234 Identities=24% Similarity=0.305 Sum_probs=166.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||+||+|+. .+++.+|+|++...... .......+.+|++++.+++|||||++++++.+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-EKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 4788899999999999999976 45788999988642111 122335678899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC---
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--- 552 (667)
|||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 999999999988754321 12349999999999999999999999975432100
Q ss_pred --------------------------------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCC
Q 042735 553 --------------------------------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFV 594 (667)
Q Consensus 553 --------------------------------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~ 594 (667)
.....+||+.|+||| |+.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 012457999999999 577999999999999999999998532
Q ss_pred ccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHh--ccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 595 SSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFS--CLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
... ...............++..+. .. ...+++.+ |...++..||+++||+++.||..+.|.
T Consensus 240 ~~~----~~~~~i~~~~~~~~~p~~~~~-s~---~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~~ 302 (363)
T cd05628 240 TPQ----ETYKKVMNWKETLIFPPEVPI-SE---KAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWE 302 (363)
T ss_pred CHH----HHHHHHHcCcCcccCCCcCCC-CH---HHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCHH
Confidence 210 111111100011112221111 11 12233333 444455578999999999999876554
No 68
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=4.8e-32 Score=282.81 Aligned_cols=229 Identities=23% Similarity=0.322 Sum_probs=167.3
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.++.++ +|||||++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 36899999999999864 5778999988653221 123345678899988877 79999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+||+++.++.+||+|||+++.............||
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (329)
T cd05618 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 159 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence 999987764321 11244999999999999999999999998643333334457899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-hhhhhhhhccccC--CCCCCCCCchHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-PSVINMRLDEMLD--PRLPPPSPDVQGKLISIM 631 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 631 (667)
+.|+||| |+.++|||||||++|||+||+.||......... ..........+.. ..+|... ...+.
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~------~~~~~ 233 (329)
T cd05618 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL------SVKAA 233 (329)
T ss_pred ccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCC------CHHHH
Confidence 9999999 467999999999999999999998532211100 0000000111111 1222211 12456
Q ss_pred HHHHhccccCCCCCCC------HHHHHHHHHHhhhhh
Q 042735 632 EVAFSCLDVSPESRPT------MQTITQQLLFSLVYF 662 (667)
Q Consensus 632 ~~~~~Cl~~~p~~RPt------~~ev~~~l~~~~~~~ 662 (667)
+++.+||+.||++||+ +++++++.||....|
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 7888999999999998 689999988876544
No 69
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=4.1e-32 Score=282.99 Aligned_cols=225 Identities=23% Similarity=0.334 Sum_probs=165.4
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHH---HhcCCCCeeEEEEEEEeCCceEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEAL---TKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l---~~l~H~niv~~~g~~~~~~~~~l 498 (667)
|+..+.||+|+||.||+|... +++.+|||++...... .....+.+.+|++++ ++++||||+++++++.+.+..++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 456788999999999999864 5788999998642111 112234566676654 57789999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 499 IYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
||||+++|+|...+..... ..|.||||+||+++.++.+||+|||+++..........
T Consensus 80 v~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 80 VMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred EEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 9999999999877654321 12349999999999999999999999976443333344
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..+||+.||||| |+.++|||||||++|||+||+.||..... ......... ..+..+...+ ..
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~----~~~~~~i~~--~~~~~p~~~~------~~ 227 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE----EEVFDSIVN--DEVRYPRFLS------RE 227 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHh--CCCCCCCCCC------HH
Confidence 578999999999 46789999999999999999999853221 011111100 0111222111 24
Q ss_pred HHHHHHhccccCCCCCC-----CHHHHHHHHHHhhh
Q 042735 630 IMEVAFSCLDVSPESRP-----TMQTITQQLLFSLV 660 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~ 660 (667)
+.+++.+||+.||++|| ++.+++++.+|...
T Consensus 228 ~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 228 AISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 56788899999999999 68999998887654
No 70
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=1.7e-31 Score=272.41 Aligned_cols=225 Identities=22% Similarity=0.287 Sum_probs=166.1
Q ss_pred eecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||+||+|.. .+++.+|||++...... .....+.+..|++++++++||||+++++++......++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999976 46788999987643211 11223567889999999999999999999999999999999999999
Q ss_pred hHHHhccc-----c-----------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 508 LATNLSND-----A-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 508 L~~~l~~~-----~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
|...+... . ...|.||||+||+++.++.+||+|||+++.............|
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 98765321 0 1123499999999999999999999999876544333445679
Q ss_pred cccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHH
Q 042735 560 TYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEV 633 (667)
Q Consensus 560 t~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (667)
|+.|+||| ++.++|||||||++|||+||+.||............. ..........+ + .....+.++
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~-~---~~~~~~~~l 231 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK----QRILNDSVTYP-D---KFSPASKSF 231 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH----HhhcccCCCCc-c---cCCHHHHHH
Confidence 99999999 4678999999999999999999986432111111111 11111111111 1 112246678
Q ss_pred HHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 634 AFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 634 ~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
+.+||+.+|++|| |+++++++.||....+
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~ 265 (280)
T cd05608 232 CEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNW 265 (280)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence 8899999999999 8899999999876544
No 71
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.97 E-value=9.8e-32 Score=250.31 Aligned_cols=235 Identities=20% Similarity=0.321 Sum_probs=173.0
Q ss_pred CCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|...+.+|+|.||.||+|+ ..+|+.||||+++.....+.. .....|||+.|+.++|||||.++++|...+..-+|+
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi--~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI--NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc--cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46667889999999999997 477899999999765443332 346889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+. +|...+.... ..-|.|+||.|+|++++|.+||+|||+|+...+.....+
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 99985 7766655432 122459999999999999999999999998876655555
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh---------h-hhhccccC---C-
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI---------N-MRLDEMLD---P- 614 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~---------~-~~~~~~~~---~- 614 (667)
..+-|..|-||| |...+|+||.|||+.||+-|.+-+...+++.....+. . .....+-| -
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 557899999999 7889999999999999999876443222110000000 0 00000000 0
Q ss_pred CCCCCCC--chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 615 RLPPPSP--DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 615 ~~~~~~~--~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..|.+.- -........++++...+..||.+|.|++|++++.+|..
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 0111110 11122334578888999999999999999999999874
No 72
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=6.2e-32 Score=282.08 Aligned_cols=229 Identities=21% Similarity=0.319 Sum_probs=168.0
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|||.+...... .....+.+.+|+.++.++ +|||||++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 36899999999999864 5788999988643221 122345688999999998 69999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+++.... ...|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (329)
T cd05588 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT 159 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence 999987764321 11234999999999999999999999998533323334457899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC-ChhhhhhhhccccC--CCCCCCCCchHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP-SPSVINMRLDEMLD--PRLPPPSPDVQGKLISIM 631 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 631 (667)
+.|+||| |+.++|||||||++|||+||+.||+....... ...........+.. ..+|... ...+.
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~ 233 (329)
T cd05588 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSL------SVKAS 233 (329)
T ss_pred ccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCC------CHHHH
Confidence 9999999 56789999999999999999999863221110 00000001111111 1222211 12466
Q ss_pred HHHHhccccCCCCCCC------HHHHHHHHHHhhhhh
Q 042735 632 EVAFSCLDVSPESRPT------MQTITQQLLFSLVYF 662 (667)
Q Consensus 632 ~~~~~Cl~~~p~~RPt------~~ev~~~l~~~~~~~ 662 (667)
+++.+|++.||.+||+ +++++++.||....|
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 7888999999999987 789999999876544
No 73
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=4.5e-32 Score=277.79 Aligned_cols=235 Identities=22% Similarity=0.308 Sum_probs=167.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. ++..+|||++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN--EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 36888899999999999999875 5778999988653221 12345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
|||++++.+........ ...|.||||+||+++.++.+||+|||+++....... ..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99999987754432111 112349999999999999999999999987643322 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC----------Chhhhhhh--hc-cccCCC
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP----------SPSVINMR--LD-EMLDPR 615 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~----------~~~~~~~~--~~-~~~~~~ 615 (667)
....||+.|+||| |+.++|||||||++|||++|+.||........ .+...... .. ......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 3457999999999 56789999999999999999999863221000 00000000 00 000000
Q ss_pred CCCCC--Cch-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 616 LPPPS--PDV-----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 616 ~~~~~--~~~-----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+... ... ......+.+++.+||+.||++|||++|++++.||
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00000 000 0012357889999999999999999999998765
No 74
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=4.1e-31 Score=281.41 Aligned_cols=224 Identities=22% Similarity=0.392 Sum_probs=165.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~ 493 (667)
++|...+.||+|+||.||+|.... +..||||++..... ....+.|.+|++++++++ |||||+++|+|.+.
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 567788999999999999997522 23699999865322 233457999999999996 99999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc---------------------------------------------------------
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA--------------------------------------------------------- 516 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------------------- 516 (667)
+..++|||||++|+|.+++....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999988764310
Q ss_pred ---------------------------------------------------------------CCcccccccCCeeecCC
Q 042735 517 ---------------------------------------------------------------AAEELDISSKNVLLDLE 533 (667)
Q Consensus 517 ---------------------------------------------------------------~~~~~dlk~~NiLld~~ 533 (667)
...|.||||+|||++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence 00123999999999999
Q ss_pred CceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhh
Q 042735 534 HKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVI 604 (667)
Q Consensus 534 ~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~ 604 (667)
+.+||+|||+++....... ......|++.|+||| ++.++|||||||++|||++ |+.||..... .....
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~---~~~~~ 350 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV---DSTFY 350 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch---hHHHH
Confidence 9999999999986543322 122345778899999 4678999999999999997 8888753211 00011
Q ss_pred hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 605 NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
. ..........+. .....+.+++.+||+.+|++|||+.+|.+.+..
T Consensus 351 ~-~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 351 N-KIKSGYRMAKPD------HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred H-HHhcCCCCCCCc------cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 1 111111111111 112356788899999999999999999998864
No 75
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=2.3e-31 Score=269.55 Aligned_cols=226 Identities=23% Similarity=0.343 Sum_probs=167.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|.. .++..+|+|++..... .....+.+|+.++++++||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 35788899999999999999986 5678899998764321 223467899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+.+..... ..|.|+||+||+++.++.+||+|||+++.........
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 9999999999887753211 1234999999999999999999999998764333223
Q ss_pred ccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....|++.|+|||+ +.++|||||||++|||+||+.|+....... ............+.... ...
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~ 236 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMSKSNFQPPKLKD----KTK 236 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---hheeeecCCCCCCCCcc----ccc
Confidence 34578999999993 347999999999999999999974222110 00000000011111111 011
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
....+.+++.+||+.+|++|||+++|+++++
T Consensus 237 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 237 WSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1235678889999999999999999998764
No 76
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=275.36 Aligned_cols=237 Identities=21% Similarity=0.337 Sum_probs=175.1
Q ss_pred HcCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC-ce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR-HS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~-~~ 496 (667)
.++|...+.||.|.||.||+|+ ..+++.||||+++....+- ++..=.||+..|+++. |||||++.+++.+.+ .+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~---ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW---EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH---HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 3567778899999999999997 5678899999998765431 2223468999999999 999999999999988 99
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|+|||||+- +|++.+.+.. ..-|+|+||+|||+.....+||+|||+||......
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC
Confidence 999999985 6766654321 12245999999999989999999999999876443
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC---------Chhhhh----hhhccc
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP---------SPSVIN----MRLDEM 611 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~---------~~~~~~----~~~~~~ 611 (667)
.+|..+.|..|-||| |+.+.|+||+|||++|+.+-++-|...+++.. .+.... ..+...
T Consensus 165 -PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 165 -PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred -CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 456788999999999 78999999999999999998876543322110 000000 011111
Q ss_pred cCCCCCCCCCch-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 LDPRLPPPSPDV-----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 ~~~~~~~~~~~~-----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+.-++|...+.. .....+.++++.+|++.||++|||++|.+++.+|....
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 222222221111 11234567788899999999999999999999987554
No 77
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=9.7e-32 Score=282.16 Aligned_cols=237 Identities=24% Similarity=0.368 Sum_probs=165.7
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----c
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-----H 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-----~ 495 (667)
+|+..+.||+|+||.||+|.. .++..||||++..... .......+.+|++++++++|||||++++++.... .
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc--cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 367788999999999999975 4688999998864322 1223456889999999999999999999886432 4
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+. ++|.+.+.... ...|.||||+|||++.++.+||+|||+++......
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 799999996 68877664321 11244999999999999999999999998643221
Q ss_pred ---CCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhh----
Q 042735 552 ---SNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVIN---- 605 (667)
Q Consensus 552 ---~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~---- 605 (667)
.......||+.|+||| |+.++|||||||++|||+||+.||....... +......
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 1223467999999999 3568999999999999999999985322100 0000000
Q ss_pred hhhc---cccCCCCCCCCC-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 606 MRLD---EMLDPRLPPPSP-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 606 ~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.... ..+....+.+.. ........+.+++.+||+.+|++|||++|++++.||....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 0000 000001110000 0001123456888999999999999999999999987544
No 78
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=5.5e-31 Score=269.17 Aligned_cols=222 Identities=25% Similarity=0.441 Sum_probs=165.9
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-C-----ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-K-----EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~-----~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|+..+.||+|+||.||+|.... + ..+|+|.+.... .......|.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 467888999999999999997533 2 468999876432 2233457999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeecCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLDLEH 534 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld~~~ 534 (667)
..+++|||+++|+|.+++..... ..|.||||+||+++.++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 99999999999999988753210 01239999999999999
Q ss_pred ceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
.+||+|||+++....... ......+|+.|+||| ++.++|||||||++|||+| |..||..... .....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~----~~~~~ 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN----QEVIE 237 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH
Confidence 999999999986533221 123345788999999 3678999999999999998 9999753221 11111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
. +.....+.... ....++.+++.+||+.+|++||+++||+++|.
T Consensus 238 ~----i~~~~~~~~~~---~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 238 M----IRSRQLLPCPE---DCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred H----HHcCCcCCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 1 11111111111 12235778888999999999999999999885
No 79
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=3.1e-31 Score=290.01 Aligned_cols=222 Identities=22% Similarity=0.262 Sum_probs=165.3
Q ss_pred CCcCcceeecccCeEEEEEEeC-C-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-S-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.|...+.||+|+||.||+|... + +..+|+|++... .......+.+|++++++++|||||++++++...+..++|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 3778889999999999999753 3 567888875432 223345678899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc----c------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSND----A------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~----~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++|+|.+.+... . ...|.||||+|||++.++.+||+|||+++......
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999998765321 0 11234999999999999999999999998764332
Q ss_pred C--CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 S--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
. .....+||+.|+||| |+.++|||||||++|||+||+.||..... ...... ......++....
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~----~~~~~~----~~~~~~~~~~~~- 294 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ----REIMQQ----VLYGKYDPFPCP- 294 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHH----HHhCCCCCCCcc-
Confidence 1 234567999999999 56789999999999999999999853221 111111 111111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+++.+||+.+|++||++++++.+.+..
T Consensus 295 --~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 295 --VSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred --CCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 112466788899999999999999999876553
No 80
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=5.6e-31 Score=266.54 Aligned_cols=223 Identities=20% Similarity=0.337 Sum_probs=164.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
.+|...+.||+|+||.||+|.+. .+..+|+|.+..... ....+.|.+|+.++++++|||||+++|++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS---DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 46778889999999999999753 345799998875422 22345799999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+|++|||.+.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999999999988754211 1134999999999999999999999886543221
Q ss_pred CC-cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 SN-WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~~-~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. .....++..|+||| ++.++|||||||++||+++ |+.||..... ...... .........+ ..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~---~~- 232 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG----QDVIKA-VEDGFRLPAP---RN- 232 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHH-HHCCCCCCCC---CC-
Confidence 11 11234567899999 4678999999999999775 9999753321 111111 1111111111 11
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+++.+||+.+|++||+++||.+.+..
T Consensus 233 --~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 233 --CPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred --CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 12346678889999999999999999987643
No 81
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=6.6e-32 Score=280.71 Aligned_cols=223 Identities=22% Similarity=0.318 Sum_probs=165.9
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. +++.+|||++...... .....+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 36899999999999864 5788999987642211 112345678899988876 59999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+.+.... ...|.||||+|||++.++.+||+|||+++.............||
T Consensus 80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (320)
T cd05590 80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT 159 (320)
T ss_pred CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence 999987765321 11234999999999999999999999998643333334456899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||..... .......... ....+... ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~i~~~--~~~~~~~~------~~~~~~li 227 (320)
T cd05590 160 PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE----DDLFEAILND--EVVYPTWL------SQDAVDIL 227 (320)
T ss_pred ccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHhcC--CCCCCCCC------CHHHHHHH
Confidence 9999999 56789999999999999999999863321 1111111110 11111111 12456788
Q ss_pred HhccccCCCCCCCH------HHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRPTM------QTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~------~ev~~~l~~~~~~~ 662 (667)
.+|++.||++||++ ++++++.||....+
T Consensus 228 ~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 228 KAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 89999999999998 89999998876544
No 82
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=285.17 Aligned_cols=219 Identities=25% Similarity=0.418 Sum_probs=171.5
Q ss_pred ceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
-++|+|.||+||-|+..+ ..++|||.+..+.. +..+-...||.+.++++|+|||+++|.+.+++..-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds----r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS----REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc----hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence 469999999999998655 46799998875432 2344578999999999999999999999999999999999999
Q ss_pred CChHHHhccccC---------------------------CcccccccCCeeec-CCCceEEecccccccccCCCCCcccc
Q 042735 506 GSLATNLSNDAA---------------------------AEELDISSKNVLLD-LEHKAHVSDFGIAKFLKPDSSNWSAL 557 (667)
Q Consensus 506 g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~~~~~~~~~ 557 (667)
|+|...|..... ..|.|||.+|||+. -.|.+||+|||.++.+........++
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 999988864311 12349999999996 78999999999999888777777889
Q ss_pred cccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 558 VGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 558 ~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
.||..||||| |..++|||||||++.||.||++||-.... +........ ...+.|.+|. +-..+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs--pqAAMFkVG-myKvHP~iPe------elsae 807 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS--PQAAMFKVG-MYKVHPPIPE------ELSAE 807 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC--hhHhhhhhc-ceecCCCCcH------HHHHH
Confidence 9999999999 78899999999999999999999853221 111111111 1112233332 22335
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...++.+|+.++|.+||++.++++..+-.
T Consensus 808 ak~FilrcFepd~~~R~sA~~LL~DpFlq 836 (1226)
T KOG4279|consen 808 AKNFILRCFEPDPCDRPSAKDLLQDPFLQ 836 (1226)
T ss_pred HHHHHHHHcCCCcccCccHHHhccCcccc
Confidence 66788999999999999999999876653
No 83
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.6e-31 Score=281.65 Aligned_cols=236 Identities=19% Similarity=0.256 Sum_probs=169.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|...+.||+|+||.||+|.. .+++.||+|+.. ...+.+|++++++++|||||++++++......++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 5688999999999999999975 567889999642 23467899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCC-CCCc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD-SSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~-~~~~ 554 (667)
+||+. ++|...+.... ...|.||||+|||++.++.+||+|||+|+..... ....
T Consensus 162 ~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 99996 67766653321 1234599999999999999999999999754322 1223
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC---hhhh------------------hhh
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS---PSVI------------------NMR 607 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~---~~~~------------------~~~ 607 (667)
...+||+.|+||| |+.++|||||||++|||+||+.|+......... .... ...
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 3468999999999 567899999999999999999875321110000 0000 000
Q ss_pred hcccc------CCCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccCCC
Q 042735 608 LDEML------DPRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYAHP 667 (667)
Q Consensus 608 ~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~~~ 667 (667)
..... ....+...+. ......++.+++.+||+.||++|||++|++++.||......|..|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~ 389 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNP 389 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCC
Confidence 00000 0000111111 111233577889999999999999999999999998766666554
No 84
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=4.9e-32 Score=282.49 Aligned_cols=223 Identities=20% Similarity=0.300 Sum_probs=167.5
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
+.||+|+||.||+|+. .++..+|+|.+...... .......+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999975 56788999988643211 112345678899999999999999999999999999999999999
Q ss_pred CChHHHhccc-------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 506 GSLATNLSND-------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 506 g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
|+|...+... ....|.||||+|||++.++.+||+|||+++.............||
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 159 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence 9998766432 122345999999999999999999999998644333334456799
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.||||| |+.++|||||||++|||+||+.||..... ....... ......++... ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~----~~~~~~i--~~~~~~~p~~~------~~~~~~li 227 (325)
T cd05594 160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELI--LMEEIRFPRTL------SPEAKSLL 227 (325)
T ss_pred cccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH----HHHHHHH--hcCCCCCCCCC------CHHHHHHH
Confidence 9999999 57799999999999999999999853221 0111110 00111222211 12456788
Q ss_pred HhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
.+||+.||++|+ ++.+++++.|+..+.+
T Consensus 228 ~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 228 SGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred HHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 899999999996 9999999988875543
No 85
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=1.2e-31 Score=270.30 Aligned_cols=217 Identities=35% Similarity=0.556 Sum_probs=153.8
Q ss_pred CcceeecccCeEEEEEEeC-----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 425 AKYCIGSGRHGSVYRAELP-----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..+.||.|.||.||+|.+. .+..|+||.+.... .....+.|.+|++.+++++||||++++|++...+..++|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS---SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS---SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc---ccccceeeeeccccccccccccccccccccccccccccc
Confidence 3567999999999999876 24579999985432 223467899999999999999999999999988889999
Q ss_pred EEecCCCChHHHhccc-c--CC-----------------------cccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSND-A--AA-----------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-~--~~-----------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+++|+|.++|... . .. .|.||+++||+++.++.+||+|||+++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999988764 1 10 12399999999999999999999999876322111
Q ss_pred --cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 --WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 --~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.....+...|+||| ++.++||||||+++||++| |+.|+..... ..... .+........+...
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~---- 230 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN----EEIIE-KLKQGQRLPIPDNC---- 230 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH----HHHHH-HHHTTEETTSBTTS----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccc-cccccccceeccch----
Confidence 12235678899999 4779999999999999999 6788643211 11111 11111111111111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
...+.+++.+||+.+|++||||++|++.|
T Consensus 231 --~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 --PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 22466788899999999999999999876
No 86
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=8.9e-32 Score=280.05 Aligned_cols=223 Identities=22% Similarity=0.314 Sum_probs=166.3
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. +++.+|||++...... .....+.+..|++++..+ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 36899999999999865 4778999987643211 112345678899998866 69999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05591 80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT 159 (321)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence 999987664321 11244999999999999999999999998644333334456899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||...... ......... +...+...+ ..+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~----~~~~~i~~~--~~~~p~~~~------~~~~~ll 227 (321)
T cd05591 160 PDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED----DLFESILHD--DVLYPVWLS------KEAVSIL 227 (321)
T ss_pred ccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH----HHHHHHHcC--CCCCCCCCC------HHHHHHH
Confidence 9999999 577899999999999999999998643211 111111000 111111111 2456788
Q ss_pred HhccccCCCCCC-------CHHHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRP-------TMQTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RP-------t~~ev~~~l~~~~~~~ 662 (667)
.+||+.+|++|| ++++++++.|+..+.|
T Consensus 228 ~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 228 KAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred HHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence 899999999999 9999999998866544
No 87
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=4.7e-32 Score=287.48 Aligned_cols=232 Identities=25% Similarity=0.299 Sum_probs=169.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. +++.||||++...... .......+.+|++++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 47888999999999999999864 5788999998642111 112335678999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC---
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--- 552 (667)
|||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.+.....
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 999999999988754321 12349999999999999999999999975432110
Q ss_pred -----------------------------------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCC
Q 042735 553 -----------------------------------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPR 591 (667)
Q Consensus 553 -----------------------------------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~ 591 (667)
.....+||+.|+||| |+.++|||||||++|||++|+.||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 011346999999999 577899999999999999999998
Q ss_pred CCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHHHHhhhhh
Q 042735 592 GFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT---MQTITQQLLFSLVYF 662 (667)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt---~~ev~~~l~~~~~~~ 662 (667)
...... ...............+... . ....+.+++.+|+. +|.+|++ ++|++++.|+....+
T Consensus 240 ~~~~~~----~~~~~i~~~~~~~~~~~~~-~---~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~ 304 (364)
T cd05599 240 CSDNPQ----ETYRKIINWKETLQFPDEV-P---LSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDW 304 (364)
T ss_pred CCCCHH----HHHHHHHcCCCccCCCCCC-C---CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 633211 0000000000011111111 0 11234567778886 8999998 999999999876544
No 88
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=8.8e-32 Score=287.07 Aligned_cols=232 Identities=21% Similarity=0.309 Sum_probs=164.9
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|+..+.||+|+||.||+|+. .+++.+|+|++..... ......+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 578889999999999999976 4578899998764211 11223456889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCC------
Q 042735 501 EYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD------ 550 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~------ 550 (667)
||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 99999999887754321 123499999999999999999999997532100
Q ss_pred -----------------------------------------CCCcccccccccccCCC------CCCCchHHHHHHHHHH
Q 042735 551 -----------------------------------------SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALE 583 (667)
Q Consensus 551 -----------------------------------------~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~E 583 (667)
.......+||+.|+||| |+.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence 00012357999999999 5778999999999999
Q ss_pred HHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHHHHhhh
Q 042735 584 VIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT---MQTITQQLLFSLV 660 (667)
Q Consensus 584 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt---~~ev~~~l~~~~~ 660 (667)
|+||+.||...... ...............+... .... +..+++.+++ .+|++|++ ++|++++.||...
T Consensus 241 lltG~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~-~~s~---~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 241 MLVGQPPFLAQTPL----ETQMKVINWQTSLHIPPQA-KLSP---EASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHhCCCCCCCCCHH----HHHHHHHccCCCcCCCCcc-cCCH---HHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999998632211 0000000000111111111 1111 2334444443 58999987 9999999998765
Q ss_pred hhc
Q 042735 661 YFS 663 (667)
Q Consensus 661 ~~~ 663 (667)
.+.
T Consensus 312 ~~~ 314 (382)
T cd05625 312 DFS 314 (382)
T ss_pred ChH
Confidence 543
No 89
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=3.6e-32 Score=283.24 Aligned_cols=222 Identities=24% Similarity=0.328 Sum_probs=162.2
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIE-ALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||+||+|... +++.+|+|++...... .....+.+.+|.. +++.++|||||++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 36899999999999864 6888999987542111 1122344556655 5678999999999999999999999999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+..... ..|.||||+|||++.++.+||+|||+++............+||
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT 159 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence 9999877654321 1234999999999999999999999998643333334456899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||..... .......... ....++.. ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~--~~~~~~~~------~~~~~~li 227 (323)
T cd05575 160 PEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT----AEMYDNILNK--PLRLKPNI------SVSARHLL 227 (323)
T ss_pred hhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH----HHHHHHHHcC--CCCCCCCC------CHHHHHHH
Confidence 9999999 56789999999999999999999853221 0111111111 11112111 12456788
Q ss_pred HhccccCCCCCCCH----HHHHHHHHHhhhh
Q 042735 635 FSCLDVSPESRPTM----QTITQQLLFSLVY 661 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~----~ev~~~l~~~~~~ 661 (667)
.+|++.+|++||++ .|++++.|+....
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~ 258 (323)
T cd05575 228 EGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258 (323)
T ss_pred HHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 89999999999987 5888888776543
No 90
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=2e-31 Score=277.77 Aligned_cols=228 Identities=22% Similarity=0.309 Sum_probs=168.5
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-RNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~g~~~~~~~~~lv 499 (667)
+|+..+.||+|+||.||+|+.. +++.+|||++...... .....+.+..|++++..++| ++|+++++++.+.+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 5778889999999999999865 4678999988643211 12234568899999999986 4688999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++..........
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 99999999987764321 112449999999999999999999999975433333344
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..+||+.|+||| |+.++|||||||++|||+||+.||...... ..... ... .....+... ...
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~-i~~-~~~~~~~~~------~~~ 227 (324)
T cd05587 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQS-IME-HNVSYPKSL------SKE 227 (324)
T ss_pred eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHH-HHc-CCCCCCCCC------CHH
Confidence 568999999999 467899999999999999999998633211 11111 101 111122211 124
Q ss_pred HHHHHHhccccCCCCCCCH-----HHHHHHHHHhhhhh
Q 042735 630 IMEVAFSCLDVSPESRPTM-----QTITQQLLFSLVYF 662 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~-----~ev~~~l~~~~~~~ 662 (667)
+.+++.+||+.+|++||+. +++.++.++....+
T Consensus 228 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 228 AVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred HHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 5678889999999999986 78988888765443
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.1e-31 Score=278.39 Aligned_cols=222 Identities=24% Similarity=0.361 Sum_probs=161.9
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh-cCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK-IRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. +++.||||.+....... ....+.+..|..++.. .+||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36899999999999864 57789999876432111 1223456677777765 479999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt 159 (316)
T cd05592 80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence 999987764321 11234999999999999999999999998654333344557899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||++|+.||..... ...... +.. ..+..+...+ ..+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~----~~~~~~-i~~-~~~~~~~~~~------~~~~~ll 227 (316)
T cd05592 160 PDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE----DELFDS-ILN-DRPHFPRWIS------KEAKDCL 227 (316)
T ss_pred ccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH----HHHHHH-HHc-CCCCCCCCCC------HHHHHHH
Confidence 9999999 57789999999999999999999863321 111111 101 1112221111 2355778
Q ss_pred HhccccCCCCCCCHH-HHHHHHHHhhhh
Q 042735 635 FSCLDVSPESRPTMQ-TITQQLLFSLVY 661 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~-ev~~~l~~~~~~ 661 (667)
.+||+.+|++||++. +++++.++....
T Consensus 228 ~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 228 SKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred HHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 899999999999864 787877776543
No 92
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-31 Score=275.10 Aligned_cols=230 Identities=23% Similarity=0.322 Sum_probs=179.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~l 498 (667)
..|+..+.||+|.||.||+++.+. |+.+|+|.+.+...... .......+|+++|+++. |||||+++++|.+....++
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 356777899999999999998755 88999999876544322 23457889999999999 9999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCC----CceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLE----HKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~----~~~kl~DFGla~~~~~~~ 551 (667)
|||++.||+|.+.+.... ...|+|+||+|+|+... +.+|++|||++..... .
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~ 192 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-G 192 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-C
Confidence 999999999998776531 11244999999999643 4799999999998776 4
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......+||+.|+||| |+.++||||.||++|.|+.|.+||.......... .+....+....+.+..
T Consensus 193 ~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--------~i~~~~~~f~~~~w~~ 264 (382)
T KOG0032|consen 193 ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--------AILRGDFDFTSEPWDD 264 (382)
T ss_pred ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--------HHHcCCCCCCCCCccc
Confidence 4567789999999999 7889999999999999999999986433211111 1112222112222222
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......+++..++..||.+|+|+.++++|.|....
T Consensus 265 is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 265 ISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred cCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 33456678889999999999999999999986654
No 93
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=8.2e-31 Score=263.58 Aligned_cols=222 Identities=24% Similarity=0.386 Sum_probs=169.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|... ++..+++|.+..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 4677889999999999999864 578899998754322 2334567999999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++++|.+++.... ...|.|+||+||+++.++.+||+|||+++.........
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~ 158 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA 158 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh
Confidence 9999999998875421 01123999999999999999999999998766544434
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|++.|+|||+ +.++|||||||++|||+||+.||..... ..... .......+.... ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~----~~~~~~~~~~~~---~~~~ 227 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ----GALIL----KIIRGVFPPVSQ---MYSQ 227 (256)
T ss_pred hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH----HHHHH----HHHcCCCCCCcc---ccCH
Confidence 45678999999993 6789999999999999999999863321 11111 111111111111 1123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.+.+++.+||+.+|++||+|.+++++.+
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 228 QLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 5678888999999999999999998743
No 94
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=3.2e-32 Score=287.25 Aligned_cols=232 Identities=24% Similarity=0.350 Sum_probs=173.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.+|||++...... .......+.+|++++..++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 36888899999999999999865 6889999998643211 112345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC----
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS---- 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~---- 551 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 99999999988875431 11234999999999999999999999998654332
Q ss_pred -------------------------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 042735 552 -------------------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS 600 (667)
Q Consensus 552 -------------------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~ 600 (667)
.......||+.|+||| ++.++|||||||++|||+||+.||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--- 236 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ--- 236 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH---
Confidence 1223457999999999 578999999999999999999998643211
Q ss_pred hhhhhhhhccc-cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHHHhhhhhc
Q 042735 601 PSVINMRLDEM-LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT-MQTITQQLLFSLVYFS 663 (667)
Q Consensus 601 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt-~~ev~~~l~~~~~~~~ 663 (667)
.....+... .....+.... ....+.+++.+|+. +|++||+ ++|++++.|+....|+
T Consensus 237 --~~~~~i~~~~~~~~~p~~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~ 294 (350)
T cd05573 237 --ETYNKIINWKESLRFPPDPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWE 294 (350)
T ss_pred --HHHHHHhccCCcccCCCCCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHH
Confidence 100011110 0111111110 12245677789997 9999999 9999999998765543
No 95
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=2.2e-31 Score=277.29 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=167.9
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv 499 (667)
+|+..+.||+|+||.||+|+.. ++..+|||.+...... .....+.+..|..++..+. ||+|+++++++.+.+..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 5778899999999999999865 4678999988653221 1223345778888888774 89999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++..........
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 99999999987764321 112349999999999999999999999986443333344
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC--CCCCCCCchHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP--RLPPPSPDVQGKL 627 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 627 (667)
..+||+.|+||| |+.++|||||||++|||+||+.||..... .... ..+... ..+... .
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~----~~~~----~~i~~~~~~~p~~~------s 225 (323)
T cd05616 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELF----QSIMEHNVAYPKSM------S 225 (323)
T ss_pred cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH----HHHH----HHHHhCCCCCCCcC------C
Confidence 578999999999 57799999999999999999999863321 1111 111111 122111 1
Q ss_pred HHHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVY 661 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~ 661 (667)
.++.+++.+|++.+|++|++ ..++.++.++....
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 226 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 24567888999999999998 47888887775443
No 96
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=8.1e-32 Score=285.09 Aligned_cols=233 Identities=21% Similarity=0.305 Sum_probs=169.2
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.+++.++|||||++++++.+++..++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 467888999999999999999875 5778999987532111 11233468899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 499 IYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+|+....... ..
T Consensus 121 v~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~ 200 (370)
T cd05621 121 VMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC 200 (370)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceec
Confidence 9999999999887754321 12449999999999999999999999987643322 22
Q ss_pred ccccccccccCCC----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 555 SALVGTYRYVAPD----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 555 ~~~~Gt~~y~aPE----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.+.+||+.||||| |+.++||||+||++|||+||+.||...... ...............+... .
T Consensus 201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~-~-- 273 (370)
T cd05621 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYSKIMDHKNSLNFPEDV-E-- 273 (370)
T ss_pred ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCcccCCCCcc-c--
Confidence 4567999999999 456899999999999999999998633211 0111111000011111111 1
Q ss_pred HHHHHHHHHHHhccccCCC--CCCCHHHHHHHHHHhhhh
Q 042735 625 GKLISIMEVAFSCLDVSPE--SRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~--~RPt~~ev~~~l~~~~~~ 661 (667)
....+.+++..|+..++. .|||++|++++.|+....
T Consensus 274 -~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 274 -ISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred -CCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence 112344566678875554 389999999999987643
No 97
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=6.8e-31 Score=266.22 Aligned_cols=228 Identities=22% Similarity=0.336 Sum_probs=169.7
Q ss_pred HHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 417 IRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 417 ~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
..+++++.....||+|+||.||+|... ++..+|+|.+.... ....+.+.+|+.++++++||||++++|++..++.
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 446677878889999999999999854 56789999875432 2334578999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccccC-C--------------------------cccccccCCeeecC-CCceEEecccccccc
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-A--------------------------EELDISSKNVLLDL-EHKAHVSDFGIAKFL 547 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-~--------------------------~~~dlk~~NiLld~-~~~~kl~DFGla~~~ 547 (667)
.++|+||+++++|.+++..... . .|.||||+||+++. ++.+||+|||++...
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 9999999999999988764311 0 12399999999986 679999999999865
Q ss_pred cCCCCCcccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 548 KPDSSNWSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 548 ~~~~~~~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
...........|++.|+|||+ +.++|||||||++|||++|+.|+....... ........ ....+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~-~~~~~~~~~~ 236 (268)
T cd06624 160 AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGM-FKIHPEIPES 236 (268)
T ss_pred ccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhh-hccCCCCCcc
Confidence 443333334568999999993 468999999999999999999975322100 00000000 0011122211
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
. ...+.+++.+||+.+|++|||+.|++++.|+
T Consensus 237 ~------~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 237 L------SAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred c------CHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1 1246678889999999999999999998763
No 98
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=2.6e-31 Score=271.95 Aligned_cols=231 Identities=24% Similarity=0.369 Sum_probs=168.6
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFC 490 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~ 490 (667)
++.+.++.++|+..+.||+|+||.||+|.. .++..+|+|++.... .....+.+|+.+++++ +||||+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 345556778999999999999999999976 457789999865321 1234678899999999 699999999988
Q ss_pred E-----eCCceEEEEEecCCCChHHHhccc-----cC-----------------------CcccccccCCeeecCCCceE
Q 042735 491 S-----HARHSILIYEYLKRGSLATNLSND-----AA-----------------------AEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 491 ~-----~~~~~~lv~ey~~~g~L~~~l~~~-----~~-----------------------~~~~dlk~~NiLld~~~~~k 537 (667)
. .++..++||||+++|+|.+.+... .. ..|.|+||+||+++.++.+|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEE
Confidence 4 345689999999999998765321 00 11349999999999999999
Q ss_pred EecccccccccCCCCCcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh
Q 042735 538 VSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 538 l~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 606 (667)
|+|||+++.............|++.|+|||+ +.++|||||||++|||+||+.|+....... ...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---~~~-- 239 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---ALF-- 239 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH---HHh--
Confidence 9999999876543333344579999999993 558999999999999999999975322110 000
Q ss_pred hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 607 RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.......+....+ . .....+.+++.+||+.+|++|||+.||++++++
T Consensus 240 ~~~~~~~~~~~~~--~--~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 240 KIPRNPPPTLHQP--E--LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hccccCCCcccCC--C--CcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0000011111111 0 011246678889999999999999999998764
No 99
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=1e-30 Score=264.70 Aligned_cols=229 Identities=21% Similarity=0.325 Sum_probs=170.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+. .++..+|||++..... ........|.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 5788899999999999999986 4678899998754222 1223456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcc----cc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSN----DA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~----~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
+||+++|+|.+.+.. .. ...|.||||+||+++.++.++|+|||+++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999876631 00 01133999999999999999999999998765433
Q ss_pred CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.......|++.|+|||+ +.++|||||||++|||+||+.|+..... ...... ...... ..++.... .
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~--~~~~~~-~~~~~~---~~~~~~~~--~ 232 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLFSLC-QKIEQC---DYPPLPTE--H 232 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc--cHHHHH-HHHhcC---CCCCCChh--h
Confidence 33344578999999993 5679999999999999999999742210 001111 111111 11111111 1
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+++.+||+.+|++||++.||++.+...
T Consensus 233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 233 YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 223567888899999999999999999988654
No 100
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=8.9e-31 Score=267.63 Aligned_cols=222 Identities=22% Similarity=0.377 Sum_probs=164.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|+..+.||+|+||.||+|.. ..+..+|+|.+..... ......|.+|++++++++||||+++++++..++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 5678888999999999999974 2456799998864322 2334578999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc-----------------------------------------CCcccccccCCeeecCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-----------------------------------------AAEELDISSKNVLLDLEH 534 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-----------------------------------------~~~~~dlk~~NiLld~~~ 534 (667)
.++||||+++|+|.+++.... ...|.||||+||+++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 999999999999988874210 011339999999999999
Q ss_pred ceEEecccccccccCCC--CCcccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDS--SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
.+||+|||+++...... .......++..|+|||+ +.++|||||||++|||+| |..||..... .....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~----~~~~~ 237 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN----QEVIE 237 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHH
Confidence 99999999998654322 11233456778999993 668999999999999999 8888743221 11111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
. ... ....+ .... ....+.+++.+||+.+|++||++.+|.+++.
T Consensus 238 ~-~~~--~~~~~-~~~~---~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 238 M-VRK--RQLLP-CSED---CPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred H-HHc--CCcCC-CCCC---CCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 1 111 01111 1111 1124667888999999999999999998875
No 101
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=7e-31 Score=266.28 Aligned_cols=219 Identities=24% Similarity=0.400 Sum_probs=156.1
Q ss_pred eeecccCeEEEEEEeCC---CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAELPS---KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~---~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|...+ +..+|+|++..... ......|.+|+.++++++||||++++|++.+....++||||++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 58999999999997643 35689998765322 2234578999999999999999999999999999999999999
Q ss_pred CCChHHHhccccC-----------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--C
Q 042735 505 RGSLATNLSNDAA-----------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--N 553 (667)
Q Consensus 505 ~g~L~~~l~~~~~-----------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--~ 553 (667)
+|+|.+++..... ..|.||||+||+++.++.+||+|||+++....... .
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 9999988753110 11239999999999999999999999975433221 1
Q ss_pred cccccccccccCCCC-------------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 554 WSALVGTYRYVAPDY-------------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-------------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.....|+..|+|||+ +.++|||||||++|||++ |+.||..... .......... .....+.+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~~ 233 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD----EQVLTYTVRE-QQLKLPKP 233 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh----HHHHHHHhhc-ccCCCCCC
Confidence 223467889999993 458999999999999996 9999853221 1111110101 01111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
... ......+.+++..|| .+|++|||++||.+.|.
T Consensus 234 ~~~-~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 234 RLK-LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccC-CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 100 001123556778999 58999999999998875
No 102
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=5.6e-31 Score=266.82 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=153.3
Q ss_pred eeecccCeEEEEEEeCCCc---eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAELPSKE---FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|+..++. .+++|.+.... .....+.|.+|+.+++.++|||||+++|++.+....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 5899999999999754432 45566654322 12345679999999999999999999999999999999999999
Q ss_pred CCChHHHhccccC----------------------------CcccccccCCeeecCCCceEEecccccccccCCC--CCc
Q 042735 505 RGSLATNLSNDAA----------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--SNW 554 (667)
Q Consensus 505 ~g~L~~~l~~~~~----------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--~~~ 554 (667)
+|+|.+++..... ..|.||||+|||++.++.+||+|||+++...... ...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999988753210 1133999999999999999999999986432211 112
Q ss_pred ccccccccccCCCC-------------CCCchHHHHHHHHHHHHhC-CCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 555 SALVGTYRYVAPDY-------------RKKCDVYSFRVLALEVIKG-KHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------------~~~~DV~sfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
....|+..|+|||+ +.++|||||||++|||+++ ..|+.....................++.++...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY 238 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence 34568899999994 3579999999999999975 667643221000000000111112222222221
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
. ..+.+++..|| .+|++||+|+||++.|.
T Consensus 239 ~------~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 239 S------ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred c------HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1 24556777899 67999999999998875
No 103
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=1.3e-30 Score=263.03 Aligned_cols=220 Identities=23% Similarity=0.396 Sum_probs=166.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 5788889999999999999998888889999875421 12457899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++....... .
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 99999999988753211 11239999999999999999999999987543221 1
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+|||+ +.++|||||||++|||+| |+.||..... ..... ....... .+.. .. .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----~~~~~-~~~~~~~--~~~~-~~---~ 229 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN----SDVMS-ALQRGYR--MPRM-EN---C 229 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH----HHHHH-HHHcCCC--CCCC-CC---C
Confidence 122346778999993 568999999999999999 9999753211 01111 1111111 1111 11 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+++.+||..+|++||+++++.+.|.
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 230 PDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 234677888999999999999999998875
No 104
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.1e-31 Score=270.28 Aligned_cols=232 Identities=20% Similarity=0.252 Sum_probs=170.7
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|+..+.||+|+||.||+|.. .++..+|||++...... .......+.+|+.++++++|||||++++++.+++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 366778999999999999986 46788999988643211 1122345788999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++|+|.+.+.... . ..|.||||+||++++++.+||+|||+++...... ..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 158 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TI 158 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-cc
Confidence 9999999987764321 0 1133999999999999999999999998754322 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....||+.|+||| ++.++|||||||++|||++|+.||........... ....+.......... ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~ 230 (285)
T cd05605 159 RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE-----VERRVKEDQEEYSEK---FSE 230 (285)
T ss_pred ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH-----HHHHhhhcccccCcc---cCH
Confidence 3457999999999 46789999999999999999999863221100000 001111111110111 122
Q ss_pred HHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
.+.+++.+||+.||++|| ++++++++.|+....|.
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred HHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 466788899999999999 89999999998765443
No 105
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=8.3e-31 Score=286.68 Aligned_cols=227 Identities=27% Similarity=0.352 Sum_probs=168.6
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR--- 494 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~--- 494 (667)
..++|...+.||+|+||.||+|+. .+++.||||++...... ......+.+|+.++..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~--~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS--EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC--HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 346888999999999999999975 56889999998653221 233456889999999999999999988775432
Q ss_pred -----ceEEEEEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEecc
Q 042735 495 -----HSILIYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 495 -----~~~lv~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DF 541 (667)
..++||||+++|+|.+.+.... ...|.||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 3679999999999988774311 1123499999999999999999999
Q ss_pred cccccccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC
Q 042735 542 GIAKFLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 542 Gla~~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 613 (667)
|+++...... ......+||+.|+||| |+.++|||||||++|||+||+.||..... ............+
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~----~~~~~~~~~~~~~ 263 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM----EEVMHKTLAGRYD 263 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHhcCCCC
Confidence 9998754321 1234568999999999 56789999999999999999999863221 1111111111111
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+ ++... ...+.+++.+||+.+|++||++.+++++.++.
T Consensus 264 ~-~~~~~------~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~ 301 (496)
T PTZ00283 264 P-LPPSI------SPEMQEIVTALLSSDPKRRPSSSKLLNMPICK 301 (496)
T ss_pred C-CCCCC------CHHHHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence 1 11111 12466788899999999999999999887654
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=2.5e-31 Score=276.18 Aligned_cols=223 Identities=25% Similarity=0.317 Sum_probs=166.5
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|||++...... .......+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36899999999999875 4678999988643211 112345677899999888 69999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 159 (318)
T cd05570 80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT 159 (318)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence 999987765431 11234999999999999999999999997643333333456799
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||...... ........ .....+... ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~----~~~~~i~~--~~~~~~~~~------~~~~~~li 227 (318)
T cd05570 160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED----ELFQSILE--DEVRYPRWL------SKEAKSIL 227 (318)
T ss_pred ccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH----HHHHHHHc--CCCCCCCcC------CHHHHHHH
Confidence 9999999 567899999999999999999998633211 11111000 011122111 12466788
Q ss_pred HhccccCCCCCCCH-----HHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRPTM-----QTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~-----~ev~~~l~~~~~~~ 662 (667)
.+||+.||++|||+ .+++++.|+..+.+
T Consensus 228 ~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 228 KSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred HHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 89999999999999 99999988876544
No 107
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.4e-32 Score=274.55 Aligned_cols=221 Identities=24% Similarity=0.415 Sum_probs=170.5
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|+..+.||+||.+.||++...+.+.+|+|++..... +......|..|+..|.++. |.+||++|+|-..++.+|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~--D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEA--DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhc--CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4566778999999999999998889999998764322 2334568999999999997 999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC--
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-- 553 (667)
||-+ -+|..+|..... ..|-||||.|.|+ -.|.+||+|||+|..+..+...
T Consensus 440 E~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred eccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcccccee
Confidence 9843 478777754321 1234999999988 5689999999999988766432
Q ss_pred cccccccccccCCC------C-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 554 WSALVGTYRYVAPD------Y-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
....+||+.||+|| + .+++||||+|||||+|+.|++||+.... ...++..+.+|.-
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~aI~~P~~ 590 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLHAITDPNH 590 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHHhhcCCCc
Confidence 24568999999999 1 3579999999999999999999863221 1122334455522
Q ss_pred ----CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 617 ----PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 617 ----~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
|...+. .+++++|..||+.||.+|||..|++++.|..
T Consensus 591 ~Iefp~~~~~-----~~li~~mK~CL~rdPkkR~si~eLLqhpFl~ 631 (677)
T KOG0596|consen 591 EIEFPDIPEN-----DELIDVMKCCLARDPKKRWSIPELLQHPFLQ 631 (677)
T ss_pred cccccCCCCc-----hHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence 222222 1377888999999999999999999987654
No 108
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=3.5e-31 Score=274.64 Aligned_cols=223 Identities=23% Similarity=0.363 Sum_probs=164.1
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh-cCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK-IRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|||.+....... ....+.+..|..++.. ++||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 36899999999999875 46789999876432111 1123456778888876 489999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+.+.... ...|.||||+|||++.++.+||+|||+++.............||
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05619 80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence 999988775421 11234999999999999999999999998643333333456799
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||..... ..... .+ ....+..+...+ ..+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~----~~~~~-~i-~~~~~~~~~~~~------~~~~~li 227 (316)
T cd05619 160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE----EELFQ-SI-RMDNPCYPRWLT------REAKDIL 227 (316)
T ss_pred ccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH----HHHHH-HH-HhCCCCCCccCC------HHHHHHH
Confidence 9999999 57789999999999999999999853221 01111 11 111122222111 2356788
Q ss_pred HhccccCCCCCCCHH-HHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRPTMQ-TITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~-ev~~~l~~~~~~~ 662 (667)
.+||+.+|++||++. ++.++.++..+.+
T Consensus 228 ~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05619 228 VKLFVREPERRLGVKGDIRQHPFFREIDW 256 (316)
T ss_pred HHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence 899999999999996 8888888766544
No 109
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=7.1e-32 Score=280.45 Aligned_cols=221 Identities=24% Similarity=0.343 Sum_probs=165.3
Q ss_pred ceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|+||.||+++. .++..+|+|++..... .......+.+|++++++++|||||++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999864 3578899998864321 122345678899999999999999999999999999999999
Q ss_pred cCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 503 LKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 503 ~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.............
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 159 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 159 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence 999999887754321 12349999999999999999999999986554433344568
Q ss_pred ccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 559 GTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 559 Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
||+.|+||| ++.++|||||||++|||+||+.||...... ......... ...++...+ ..+.+
T Consensus 160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~----~~~~~i~~~--~~~~p~~~~------~~~~~ 227 (318)
T cd05582 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK----ETMTMILKA--KLGMPQFLS------PEAQS 227 (318)
T ss_pred CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH----HHHHHHHcC--CCCCCCCCC------HHHHH
Confidence 999999999 467899999999999999999998632211 111111011 111221111 23567
Q ss_pred HHHhccccCCCCCCC-----HHHHHHHHHHhhhh
Q 042735 633 VAFSCLDVSPESRPT-----MQTITQQLLFSLVY 661 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~ 661 (667)
++.+||+.||++||+ .++++.+.|+..+.
T Consensus 228 li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 228 LLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence 888999999999999 67788887776543
No 110
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=4.6e-31 Score=275.28 Aligned_cols=228 Identities=21% Similarity=0.310 Sum_probs=166.6
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|+|++...... .....+.+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 36999999999999864 5678999998653221 122345688999999888 59999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+|||++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (327)
T cd05617 80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT 159 (327)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence 999987664321 11244999999999999999999999998543333334457899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC--CCCCCCCCchHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD--PRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 632 (667)
+.|+||| |+.++|||||||++|||+||+.||.......... ........+.. ...+...+ ..+.+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~------~~~~~ 232 (327)
T cd05617 160 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKPIRIPRFLS------VKASH 232 (327)
T ss_pred cccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCCCCCCCCCC------HHHHH
Confidence 9999999 5679999999999999999999986322111000 00000011111 11222111 23567
Q ss_pred HHHhccccCCCCCCC------HHHHHHHHHHhhhhh
Q 042735 633 VAFSCLDVSPESRPT------MQTITQQLLFSLVYF 662 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt------~~ev~~~l~~~~~~~ 662 (667)
++.+||+.||++||+ ++++.++.||....|
T Consensus 233 li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~ 268 (327)
T cd05617 233 VLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW 268 (327)
T ss_pred HHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence 888999999999998 579999988876544
No 111
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=1.8e-30 Score=269.78 Aligned_cols=223 Identities=23% Similarity=0.434 Sum_probs=164.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.+|+..+.||+|+||.||+|.+. ++. .+|+|++.... .....++|.+|+.+++.++||||++++|+|... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 46888999999999999999863 333 38999876422 123456799999999999999999999999765 5
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++|+||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 6789999999999887764321 123499999999999999999999999976543
Q ss_pred CCCc--ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SSNW--SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~~~--~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.... ....++..|+||| ++.++|||||||++|||+| |+.|++.... ......... ....+.+.
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-----~~~~~~~~~--~~~~~~~~- 234 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEK--GERLPQPP- 234 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhC--CCCCCCCC-
Confidence 3221 1233467899999 4678999999999999998 9999753221 111111111 11111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. ....+.+++.+||+.+|++||++.+++.++...
T Consensus 235 ~---~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 235 I---CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred C---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 123567888899999999999999999987654
No 112
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=9.3e-31 Score=269.18 Aligned_cols=226 Identities=23% Similarity=0.398 Sum_probs=170.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|+..+.||+|+||.||+|.. .++..+|+|.+..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc----chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 4677888999999999999975 5678899998764322 2245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...........
T Consensus 96 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (296)
T cd06654 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (296)
T ss_pred ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCc
Confidence 99999999988775321 1123499999999999999999999999865544333344
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|++.|+||| ++.++|||||||++|||+||+.||...... ..... .......+...+. .....+
T Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~---~~~~~----~~~~~~~~~~~~~--~~~~~l 246 (296)
T cd06654 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---RALYL----IATNGTPELQNPE--KLSAIF 246 (296)
T ss_pred ccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH---HhHHH----HhcCCCCCCCCcc--ccCHHH
Confidence 57899999999 357899999999999999999998532210 00000 0011111101111 112346
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+++.+||..+|++|||+.|++++.|+..
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 67888999999999999999999888753
No 113
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=3.1e-30 Score=261.12 Aligned_cols=223 Identities=26% Similarity=0.453 Sum_probs=166.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|.... ...+|||.+..... ......|.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS---DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC---hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 568889999999999999998642 35789998764322 23356799999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999999999988754211 1233999999999999999999999999765222
Q ss_pred CCcc--cccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 552 SNWS--ALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 552 ~~~~--~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
.... ...+++.|+|||+ +.++||||||+++|||+| |..||.... ........ .... ..+.+ ..
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~----~~~~~~~~-~~~~--~~~~~-~~ 232 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS----NQDVIKAV-EDGY--RLPPP-MD 232 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC----HHHHHHHH-HcCC--CCCCC-CC
Confidence 2111 2345678999993 568999999999999998 999974221 11111111 1100 11111 11
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+++.+||+.+|++||+++||+++|..
T Consensus 233 ---~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 233 ---CPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred ---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 12346788899999999999999999998864
No 114
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97 E-value=1.5e-31 Score=256.42 Aligned_cols=237 Identities=21% Similarity=0.273 Sum_probs=169.4
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~ 496 (667)
+++|+..+.|++|.||.||+|+. ++++.||.|+++....... ..-...|||.++.+++|||||.+..+... -+..
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G--FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG--FPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC--CcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 45677888999999999999975 5688999999875432211 12246799999999999999999988764 4679
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|+|||||+. +|...+.... ...|.|||++|+|+...|.+||+|||+||.+....
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 999999986 6665554321 12345999999999999999999999999887766
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh----------hccc--c
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR----------LDEM--L 612 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~----------~~~~--~ 612 (667)
..+|..+-|..|-||| |+...|+||+|||+.||+++++-|...+.+.....+.... ..+. +
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~ 311 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV 311 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence 6677788999999999 8899999999999999999997654322211111110000 0000 0
Q ss_pred -CCCCCCCCC-chH----H--HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 613 -DPRLPPPSP-DVQ----G--KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 613 -~~~~~~~~~-~~~----~--~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.... ... . -...-.+++..-+..||.+|-|+.|.+++-||..
T Consensus 312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 000000000 000 0 0023345666789999999999999999998865
No 115
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=1.3e-30 Score=262.22 Aligned_cols=218 Identities=26% Similarity=0.458 Sum_probs=163.7
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
+|+..+.||+|+||.||+|..+++..+|+|.+..... ....|.+|++++++++||||+++++++.+.+..++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 5778889999999999999987777899998754221 23468899999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-cc
Q 042735 502 YLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-WS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-~~ 555 (667)
|+++++|.+++..... ..|.|+||+||+++.++.+||+|||+++........ ..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 9999999988753211 123499999999999999999999999865432211 11
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...++..|+||| ++.++|||||||++|||+| |+.||...... ... ...........+.. ...
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~-~~~~~~~~~~~~~~------~~~ 228 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS----EVV-ESVSAGYRLYRPKL------APT 228 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH----HHH-HHHHcCCcCCCCCC------CCH
Confidence 122445799999 4568999999999999999 78887532211 111 11111111112211 123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
.+.+++.+||..+|++||||.|+++.+
T Consensus 229 ~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 229 EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 577889999999999999999999876
No 116
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=280.62 Aligned_cols=303 Identities=21% Similarity=0.183 Sum_probs=274.1
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccc
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALEN 83 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~ 83 (667)
-+.||+++|++..+-+..|.++++|+.++|..|.++ .+|...+...+|+.|+|.+|.|+..-...+.. ..|++|||+.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 467999999999888888999999999999999998 68886666778999999999987554445554 5699999999
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.++......|....++++|+|++|.|+..--.+|.++.+|..|.|++|+++..++..|..+++|+.|+|..|+|.-.--
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 99987766777778899999999999998888899999999999999999998888999999999999999999965556
Q ss_pred ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCC
Q 042735 164 SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTK 243 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 243 (667)
..|.++++|+.|.|..|.+...-...|..|.++++|+|..|++...-..++-+|++|+.|+|++|.+....++++...++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 78999999999999999999888889999999999999999998777788899999999999999999999999999999
Q ss_pred CCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcc
Q 042735 244 LEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPS 308 (667)
Q Consensus 244 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~ 308 (667)
|++|+|++|+++...+..|..+..|+.|+|++|.+...-...|..+.+|+.|||++|.++..|.+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 99999999999999999999999999999999998776677889999999999999999876655
No 117
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=1.9e-30 Score=276.07 Aligned_cols=224 Identities=23% Similarity=0.367 Sum_probs=165.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~ 493 (667)
+++...+.||+|+||.||+|.+. .+..||||++..... ....+.+.+|++++.++. |||||+++|+|...
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 45667789999999999999853 245799999875422 122346899999999998 99999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc---------------------------------------------------------
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA--------------------------------------------------------- 516 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------------------- 516 (667)
+..++||||+++|+|.++++...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999998875321
Q ss_pred -----------------------------------------------------------------CCcccccccCCeeec
Q 042735 517 -----------------------------------------------------------------AAEELDISSKNVLLD 531 (667)
Q Consensus 517 -----------------------------------------------------------------~~~~~dlk~~NiLld 531 (667)
...|.||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 001339999999999
Q ss_pred CCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++....... ......|++.||||| ++.++|||||||++|||++ |+.||..... ..
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~----~~ 349 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM----NE 349 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc----hH
Confidence 999999999999986533221 122345788999999 4678999999999999998 8888753211 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+..-..+..+.. ....+.+++.+||..+|++||+++||++.|..
T Consensus 350 ~~~~~~~~~~~~~~p~~------~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 350 QFYNAIKRGYRMAKPAH------ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHcCCCCCCCCC------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11111111111111111 12356788889999999999999999998865
No 118
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=8.1e-32 Score=286.78 Aligned_cols=232 Identities=20% Similarity=0.271 Sum_probs=165.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+. .+++.+|||.+...... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL-MRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 3688899999999999999976 45788999987542111 112245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCC-----
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD----- 550 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~----- 550 (667)
|||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+|+.....
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 999999999987754321 123499999999999999999999998532100
Q ss_pred --------------------------------------CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHh
Q 042735 551 --------------------------------------SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK 586 (667)
Q Consensus 551 --------------------------------------~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt 586 (667)
.......+||+.||||| |+.++|||||||++|||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence 00012357999999999 5778999999999999999
Q ss_pred CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCC---CHHHHHHHHHHhhhhh
Q 042735 587 GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRP---TMQTITQQLLFSLVYF 662 (667)
Q Consensus 587 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RP---t~~ev~~~l~~~~~~~ 662 (667)
|+.||...... ...............+.. ... ...+.+++.+|+ .+|++|+ |+.|++++.|+....+
T Consensus 240 G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~-~~~---s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 240 GQPPFLADTPA----ETQLKVINWETTLHIPSQ-AKL---SREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDF 309 (376)
T ss_pred CCCCCCCCCHH----HHHHHHhccCccccCCCC-CCC---CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence 99998633211 000000000000111111 111 113345555655 4999999 9999999999876443
No 119
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=1.6e-30 Score=265.25 Aligned_cols=222 Identities=27% Similarity=0.479 Sum_probs=165.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||+|...+ +..+|||.+..... ....+.|.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 457778899999999999997533 46799998865322 223467999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC--------------------------------------CcccccccCCeeecCCCce
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA--------------------------------------AEELDISSKNVLLDLEHKA 536 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~--------------------------------------~~~~dlk~~NiLld~~~~~ 536 (667)
..++||||+++|+|.+++..... ..|.||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 99999999999999988753210 1123999999999999999
Q ss_pred EEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhh
Q 042735 537 HVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMR 607 (667)
Q Consensus 537 kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~ 607 (667)
||+|||+++....... ......+++.|+||| ++.++|||||||++|||++ |+.||..... ......
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~----~~~~~~- 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN----EEVIEC- 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH-
Confidence 9999999986432221 122345678899999 4678999999999999999 9999753221 111111
Q ss_pred hccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 608 LDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
+.....+..... ....+.+++.+||+.+|++|||++||++.+.
T Consensus 237 ---~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 ---ITQGRLLQRPRT---CPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ---HHcCCcCCCCCC---CCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111111111111 1235678889999999999999999998874
No 120
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=6.7e-32 Score=281.06 Aligned_cols=221 Identities=23% Similarity=0.338 Sum_probs=160.8
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIE-ALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|+|.+...... .......+.+|.. +++.++|||||++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36899999999999874 5788999987542211 1122345666665 5788999999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+.... ...|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT 159 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence 999987764321 11234999999999999999999999998643333334456899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||+||+.||..... .... ..+.......+.. ....+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~----~~i~~~~~~~~~~----~~~~~~~li 227 (321)
T cd05603 160 PEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV----SQMY----DNILHKPLQLPGG----KTVAACDLL 227 (321)
T ss_pred cccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH----HHHH----HHHhcCCCCCCCC----CCHHHHHHH
Confidence 9999999 56789999999999999999999853221 0111 1111111111111 122466788
Q ss_pred HhccccCCCCCCCH----HHHHHHHHHhhh
Q 042735 635 FSCLDVSPESRPTM----QTITQQLLFSLV 660 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~----~ev~~~l~~~~~ 660 (667)
.+|++.+|++||++ .|+.++.++...
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 228 VGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred HHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 89999999999875 588887777543
No 121
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=3.4e-31 Score=269.01 Aligned_cols=224 Identities=24% Similarity=0.377 Sum_probs=165.6
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC---
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA--- 493 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~--- 493 (667)
+.+.|+..+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.++.++ +||||++++|++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 4566778889999999999999864 57789999875431 1234688999999998 699999999998753
Q ss_pred ---CceEEEEEecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEeccccc
Q 042735 494 ---RHSILIYEYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 494 ---~~~~lv~ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
...++||||+++|+|.+.+.... . ..|.|+||+||+++.++.+||+|||++
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 45789999999999998776421 0 012399999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 613 (667)
+.............|++.|+|||+ +.++|||||||++|||++|+.|+...... ...........
T Consensus 159 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~ 233 (272)
T cd06637 159 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIPRNPA 233 (272)
T ss_pred eecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHHHHHhcCCC
Confidence 876543333455679999999993 34799999999999999999997532211 00000001001
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..... .. ....+.+++.+||..+|.+|||+.|++++.|+
T Consensus 234 ~~~~~--~~---~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 PRLKS--KK---WSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCC--CC---cCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 11111 11 11246688889999999999999999998764
No 122
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-32 Score=251.45 Aligned_cols=223 Identities=22% Similarity=0.377 Sum_probs=164.5
Q ss_pred cCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEE
Q 042735 424 DAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~e 501 (667)
+....+|.|..|.|+++++++ |...|||.+.... ..++.+++...++++.+-. .|.||+.+|||......++.||
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 445668999999999998765 7889999886532 2344567888888877655 8999999999999999999999
Q ss_pred ecCC----------CCh---------------HHHhccccCCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKR----------GSL---------------ATNLSNDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~----------g~L---------------~~~l~~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
.|.. +.. .++|.+.....|.|+||+|||+|+.|++|+||||++..+.+.. ..+.
T Consensus 172 lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-Ahtr 250 (391)
T KOG0983|consen 172 LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-AHTR 250 (391)
T ss_pred HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc-cccc
Confidence 8742 111 0122233344567999999999999999999999998776443 3455
Q ss_pred ccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..|-+.||||| |+-++|||||||.++||+||+.||...... ..+ +..+++ ..|+..+...+..
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---Fe~----ltkvln-~ePP~L~~~~gFS 322 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---FEV----LTKVLN-EEPPLLPGHMGFS 322 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---HHH----HHHHHh-cCCCCCCcccCcC
Confidence 78999999999 778899999999999999999998642211 111 122222 1122222222234
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+.+++..|+.+|+.+||.-.+++++.+..
T Consensus 323 p~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 323 PDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred HHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 4677888899999999999999999987653
No 123
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=2.1e-30 Score=261.72 Aligned_cols=227 Identities=23% Similarity=0.355 Sum_probs=168.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCc-hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSD-QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
++|+..+.||+|++|.||+|.. .++..+|+|.+....... .....+.+.+|++++++++||||++++|++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999975 467889999876432211 12234568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||||+++++|.+.+..... ..|.||||+||++++++.+||+|||+++........
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 9999999999887653211 123499999999999999999999999865432211
Q ss_pred --cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 554 --WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 554 --~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....|+..|+||| ++.++|||||||++|||++|+.||...... ............+..+..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~------ 231 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPQLPSH------ 231 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCCCCCCCcc------
Confidence 13456889999999 467899999999999999999997532211 000000001011111211
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+++.+||..+|++|||+.|++++.||
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 232 VSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 11245678889999999999999999998764
No 124
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=1.7e-30 Score=261.42 Aligned_cols=219 Identities=25% Similarity=0.436 Sum_probs=164.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.+|...+.||+|+||.||+|+..++..+|||.+..... ....|.+|+.++.+++||||++++|++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 45777889999999999999887777799998764321 2356899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-c
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-W 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-~ 554 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||.++........ .
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 99999999988754211 112399999999999999999999999865432211 1
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....++..|+||| ++.++|||||||++|||+| |+.||..... ...... ......+..+.. ..
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~~~------~~ 227 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN----SETVEK-VSQGLRLYRPHL------AS 227 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHH-HhcCCCCCCCCC------CC
Confidence 1223567899999 4678999999999999999 9999753221 111111 111111111111 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..+.+++.+||+.+|++|||+.+|++.+
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 3567888899999999999999999875
No 125
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=4.1e-31 Score=274.26 Aligned_cols=223 Identities=22% Similarity=0.331 Sum_probs=164.2
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|+|.+....... ....+.+..|+.++... +||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 36899999999999875 57889999886432111 12234567788888754 89999999999999999999999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+..... ..|.||||+||+++.++.+||+|||+++............+||
T Consensus 80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05620 80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence 9999877654211 1234999999999999999999999998543333334567899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| |+.++|||||||++|||++|+.||..... ..... .. ....+..+... ..++.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~----~~~~~-~~-~~~~~~~~~~~------~~~~~~li 227 (316)
T cd05620 160 PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE----DELFE-SI-RVDTPHYPRWI------TKESKDIL 227 (316)
T ss_pred cCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHHH-HH-HhCCCCCCCCC------CHHHHHHH
Confidence 9999999 56789999999999999999999853221 11111 00 01112222211 12456788
Q ss_pred HhccccCCCCCCCH-HHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRPTM-QTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~-~ev~~~l~~~~~~~ 662 (667)
.+||+.||++||++ +++.++.||....+
T Consensus 228 ~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 228 EKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred HHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 89999999999998 57888888866543
No 126
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=6.8e-31 Score=269.47 Aligned_cols=232 Identities=19% Similarity=0.334 Sum_probs=159.0
Q ss_pred CCcCcceeecccCeEEEEEEe-C-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc---CCCCeeEEEEEEEe----
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-P-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI---RHRNIVKFYGFCSH---- 492 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~g~~~~---- 492 (667)
+|+..+.||+|+||.||+|+. . ++..+|||++....... .....+.+|+++++++ +||||++++++|..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 577888999999999999976 3 46789999876433221 1223466777777665 69999999999852
Q ss_pred -CCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccc
Q 042735 493 -ARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 493 -~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
....++||||++ |+|.+++.... ...|.||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 456899999997 57877664311 11244999999999999999999999998
Q ss_pred cccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-----------h-
Q 042735 546 FLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-----------R- 607 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-----------~- 607 (667)
..... .......||+.|+||| |+.++|||||||++|||+||++||...........+.+. .
T Consensus 159 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (290)
T cd07862 159 IYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 237 (290)
T ss_pred eccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhh
Confidence 75433 2234567999999999 577899999999999999999998633211000000000 0
Q ss_pred --hccccCCCCCCCCCch-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 608 --LDEMLDPRLPPPSPDV-QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 608 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+..+.+.... ......+.+++.+|++.+|++|||+.|++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 238 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred cccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0000000000000000 0011245678899999999999999999988764
No 127
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=1.6e-31 Score=284.52 Aligned_cols=232 Identities=22% Similarity=0.270 Sum_probs=166.1
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+. .+++.+|||++..... ......+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 3688889999999999999975 5678899998754211 1122345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC---
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--- 552 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99999999988775321 112349999999999999999999999963211000
Q ss_pred --------------------------------------------CcccccccccccCCC------CCCCchHHHHHHHHH
Q 042735 553 --------------------------------------------NWSALVGTYRYVAPD------YRKKCDVYSFRVLAL 582 (667)
Q Consensus 553 --------------------------------------------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ 582 (667)
.....+||+.|+||| |+.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 001257999999999 578999999999999
Q ss_pred HHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCC---CCCHHHHHHHHHHhh
Q 042735 583 EVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPES---RPTMQTITQQLLFSL 659 (667)
Q Consensus 583 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~---RPt~~ev~~~l~~~~ 659 (667)
||+||+.||...... ...............+... .....+.+++.+|+. +|.+ ||++.|++++.|+..
T Consensus 240 elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~----~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 240 ECLIGWPPFCSENSH----ETYRKIINWRETLYFPDDI----HLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhhcCCCCCCCCCHH----HHHHHHHccCCccCCCCCC----CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 999999998532210 0000000000011111110 111245677778887 6665 569999999999875
Q ss_pred hhh
Q 042735 660 VYF 662 (667)
Q Consensus 660 ~~~ 662 (667)
..+
T Consensus 311 ~~~ 313 (377)
T cd05629 311 VDW 313 (377)
T ss_pred CCH
Confidence 543
No 128
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=9.5e-31 Score=263.11 Aligned_cols=222 Identities=27% Similarity=0.441 Sum_probs=169.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|.... +..+++|.+... ...+++.+|++++++++||||++++|++.+....+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH------HHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 568888899999999999998765 788999987542 1156799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
+||+++++|.+.+..... ..|.|++|+||+++.++.+||+|||++..........
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 999999999988753211 1234999999999999999999999998765443333
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|+..|+||| ++.++|||||||++|||+||+.|+....... ... ..................
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~ 227 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR---AIF------MIPNKPPPTLSDPEKWSP 227 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh---hhh------hhccCCCCCCCchhhcCH
Confidence 4456899999999 4678999999999999999999976322110 000 000001111111111123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+.+++.+||+.+|++|||+.||+++.|+
T Consensus 228 ~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 228 EFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 46778889999999999999999987664
No 129
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=5e-31 Score=260.14 Aligned_cols=230 Identities=21% Similarity=0.293 Sum_probs=175.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||.|.-|+||.++.++ +..+|+|++.+..... .....+...|-+||+.++||.++.+|+.+...+..++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-hhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 456677889999999999999866 5889999987643211 22234577899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------C--------------cccccccCCeeecCCCceEEecccccccccC----
Q 042735 500 YEYLKRGSLATNLSNDAA------------A--------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKP---- 549 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------~--------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~---- 549 (667)
||||+||+|...++.+.. + ...||||+||||.++|++.|+||-++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 999999999988765421 0 1129999999999999999999988743210
Q ss_pred -----------------------------C-C----------------------CCcccccccccccCCC------CCCC
Q 042735 550 -----------------------------D-S----------------------SNWSALVGTYRYVAPD------YRKK 571 (667)
Q Consensus 550 -----------------------------~-~----------------------~~~~~~~Gt~~y~aPE------~~~~ 571 (667)
. . .....++||..|+||| .+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 0 0 0012468999999999 3668
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC--CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC--
Q 042735 572 CDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD--PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT-- 647 (667)
Q Consensus 572 ~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt-- 647 (667)
+|+|+|||++|||+.|+.||...... ..+..++. ...|.. ........+++.+-|.+||.+|--
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~--------~Tl~NIv~~~l~Fp~~----~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNK--------ETLRNIVGQPLKFPEE----PEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCch--------hhHHHHhcCCCcCCCC----CcchhHHHHHHHHHhccChhhhhccc
Confidence 99999999999999999998643321 11122222 222222 133446678888999999999998
Q ss_pred --HHHHHHHHHHhhhhhc
Q 042735 648 --MQTITQQLLFSLVYFS 663 (667)
Q Consensus 648 --~~ev~~~l~~~~~~~~ 663 (667)
++||.+|.+|.++.|.
T Consensus 384 rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 384 RGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred cchHHhhcCccccCCChh
Confidence 9999999999999875
No 130
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=2.6e-31 Score=281.49 Aligned_cols=235 Identities=20% Similarity=0.292 Sum_probs=170.5
Q ss_pred HHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
...++|+..+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|+.+++.++||||+++++++.+++..
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34578999999999999999999875 577899998753211 1112334578999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~- 552 (667)
++||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++.......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~ 198 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 198 (371)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence 999999999999887754321 12349999999999999999999999987643221
Q ss_pred CcccccccccccCCC----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 553 NWSALVGTYRYVAPD----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
.....+||+.||||| |+.++|||||||++|||++|+.||...... ..........-....+.. .
T Consensus 199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~-~- 272 (371)
T cd05622 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMNHKNSLTFPDD-N- 272 (371)
T ss_pred cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCcccCCCc-C-
Confidence 223567999999999 456899999999999999999998632211 011111000001111111 1
Q ss_pred hHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHHHHhhhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPES--RPTMQTITQQLLFSLVY 661 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~--RPt~~ev~~~l~~~~~~ 661 (667)
.....+.+++..|+...+.+ ||+++|++++.|+....
T Consensus 273 --~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 273 --DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred --CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 11224556777899844433 78999999999987644
No 131
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=1.4e-30 Score=262.74 Aligned_cols=223 Identities=25% Similarity=0.459 Sum_probs=169.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..+|+..+.||+|+||.||+|...++..+|+|.+.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 45688889999999999999998888899999876432 22345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 999999999988764211 112399999999999999999999999876543322
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+||| ++.++|||||||++|||++ |+.||..... ....... .....+..+. ..
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~------~~ 229 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN----HEVYDQI-TAGYRMPCPA------KC 229 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHHH-HhCCcCCCCC------CC
Confidence 23345677899999 4568999999999999998 8888753221 1111111 1111111111 11
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++|||++++.+.|..
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 230 PQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2346688899999999999999999998864
No 132
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=2.1e-30 Score=263.57 Aligned_cols=226 Identities=26% Similarity=0.412 Sum_probs=172.4
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||.|+||.||+|... ++..+|+|.+..... ......+.+|++++++++||||+++++++.++...++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA---EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc---chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 5677788999999999999864 578899998764321 223456889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccc
Q 042735 501 EYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSAL 557 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~ 557 (667)
||+++|+|.+++..... ..|.|++|+||+++.++.++|+|||+++............
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (274)
T cd06609 79 EYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF 158 (274)
T ss_pred EeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence 99999999888764321 1234999999999999999999999998776543333456
Q ss_pred cccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHH
Q 042735 558 VGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIM 631 (667)
Q Consensus 558 ~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (667)
.|++.|+||| ++.++|||||||++|||+||+.|+...... ... ........+..+.. .....+.
T Consensus 159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~-~~~~~~~~~~~~~~-----~~~~~~~ 228 (274)
T cd06609 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVL-FLIPKNNPPSLEGN-----KFSKPFK 228 (274)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHH-HHhhhcCCCCCccc-----ccCHHHH
Confidence 7899999999 367899999999999999999998532210 000 01111111111111 0122466
Q ss_pred HHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 632 EVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 632 ~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+++.+||..+|++|||+++++++.|+...
T Consensus 229 ~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 229 DFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred HHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 78889999999999999999999888643
No 133
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=3.2e-30 Score=262.70 Aligned_cols=227 Identities=24% Similarity=0.348 Sum_probs=172.9
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.|+..+.||+|+||.||+|... ++..+|+|.+..... ......+.+|+.++++++||||+++++++.+....++||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 4566778999999999999864 578899998764321 233467899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccc
Q 042735 501 EYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSAL 557 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~ 557 (667)
||+++|+|.+++..... ..|.||+|+||+++.++.++++|||++.............
T Consensus 82 e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06640 82 EYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred ecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence 99999999887754321 1234999999999999999999999998765433333445
Q ss_pred cccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHH
Q 042735 558 VGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIM 631 (667)
Q Consensus 558 ~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (667)
.|+..|+|||+ +.++|||||||++|||+||+.|+...... .. ........++... ......+.
T Consensus 162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~----~~~~~~~~~~~~~--~~~~~~~~ 230 (277)
T cd06640 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RV----LFLIPKNNPPTLT--GEFSKPFK 230 (277)
T ss_pred cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hH----hhhhhcCCCCCCc--hhhhHHHH
Confidence 78899999994 56899999999999999999997532211 00 0011111111111 12334677
Q ss_pred HHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 632 EVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 632 ~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
+++.+||+.+|++||++++++++.++....+
T Consensus 231 ~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 231 EFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred HHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 8899999999999999999999998876554
No 134
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-30 Score=268.69 Aligned_cols=226 Identities=25% Similarity=0.422 Sum_probs=170.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|+..+.||.|+||.||+|.. .+++.+|+|.+..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3578888999999999999975 5688999998754321 2245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
+||+++|+|...+..... ..|.||||+||+++.++.+||+|||+++...........
T Consensus 95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 95 MEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred EEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 999999999887654321 123499999999999999999999999876544333344
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|++.|+||| ++.++|||||||++|||+||+.||....... ... .......+.+..+ .. ....+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~---~~~--~~~~~~~~~~~~~-~~---~~~~~ 245 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALY--LIATNGTPELQNP-EK---LSPIF 245 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH--HHHhcCCcccCCc-cc---CCHHH
Confidence 57899999999 3568999999999999999999985432110 000 0000001111111 11 11246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+++.+||..+|++|||+.+|+.+.|+..
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 67888999999999999999999998864
No 135
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.4e-30 Score=261.74 Aligned_cols=227 Identities=23% Similarity=0.382 Sum_probs=168.0
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCc--hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSD--QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+|...+.||+|+||.||+|...++..+|||.+....... .......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 366778999999999999988888899999876432211 122335688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCC-----
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD----- 550 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~----- 550 (667)
|||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 999999999988754211 113399999999999999999999999865321
Q ss_pred -CCCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 551 -SSNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 551 -~~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
........|+..|+|||+ +.++|||||||++|||+||+.||....... ............+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~--- 234 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA---AMFYIGAHRGLMPRLPDSF--- 234 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH---HHHHhhhccCCCCCCCCCC---
Confidence 111234568999999993 578999999999999999999985322110 0000000000111122111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++||++.|++++.|+
T Consensus 235 ---~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 235 ---SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ---CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 2245678889999999999999999987653
No 136
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.2e-30 Score=265.68 Aligned_cols=225 Identities=21% Similarity=0.285 Sum_probs=162.3
Q ss_pred eecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||.||+++. .+++.+|+|++....... ....+.+..|++++++++||||+++++++..+...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 69999999999976 458899999885422111 1123456679999999999999999999999999999999999999
Q ss_pred hHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 508 LATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 508 L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|.+.+.... ...|.||||+||+++.++.+||+|||++....... ......||+
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~ 158 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTN 158 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCC
Confidence 987663211 11133999999999999999999999998654322 223457899
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| ++.++||||+||++|||++|+.||............ ............... ...++.+++.
T Consensus 159 ~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~li~ 231 (277)
T cd05607 159 GYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL----KRRTLEDEVKFEHQN---FTEESKDICR 231 (277)
T ss_pred CccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHH----HHHhhcccccccccc---CCHHHHHHHH
Confidence 999999 467899999999999999999998532211000011 111111111111111 1224678888
Q ss_pred hccccCCCCCCCH----HHHHHHHHHhhhhh
Q 042735 636 SCLDVSPESRPTM----QTITQQLLFSLVYF 662 (667)
Q Consensus 636 ~Cl~~~p~~RPt~----~ev~~~l~~~~~~~ 662 (667)
+||+.+|++||++ ++++.+.||....|
T Consensus 232 ~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 232 LFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred HHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 9999999999999 56667777766544
No 137
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=3.9e-30 Score=263.58 Aligned_cols=226 Identities=25% Similarity=0.420 Sum_probs=166.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 46778889999999999999742 24568888875421 233457999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC-------------------------------------CcccccccCCeeecCCCceE
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-------------------------------------AEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-------------------------------------~~~~dlk~~NiLld~~~~~k 537 (667)
..++||||+++|+|.+++..... ..|.||||+||++++++.+|
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence 99999999999999887753210 11239999999999999999
Q ss_pred EecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhh
Q 042735 538 VSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 538 l~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 608 (667)
|+|||+++....... ......+++.|+||| ++.++|||||||++|||+| |+.||..... ......
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~----~~~~~~-- 234 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----NEVIEC-- 234 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHH--
Confidence 999999986543221 122344678899999 4668999999999999999 8888753221 111111
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+.....+..... ...++.+++.+||+.+|.+|||++|+.+.+......
T Consensus 235 --i~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 --ITQGRVLQRPRT---CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --HHcCCcCCCCCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111111111111 122577899999999999999999999888776544
No 138
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=1.1e-31 Score=280.63 Aligned_cols=232 Identities=24% Similarity=0.286 Sum_probs=170.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+. .+++.+|+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-AQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 3688889999999999999976 46788999988643211 112345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++........
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999998875431 1123499999999999999999999999876543221
Q ss_pred cccccccccccCCCC------------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 554 WSALVGTYRYVAPDY------------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.....||+.|+|||+ +.++|||||||++|||+||+.||....... ..............+.. +
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~-~ 234 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK----TYNNIMNFQRFLKFPED-P 234 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH----HHHHHHcCCCccCCCCC-C
Confidence 233579999999993 357999999999999999999986332110 00000000000111111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
. ....+.+++..|+. +|++|||+++++++.|+....+
T Consensus 235 ~---~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~ 271 (330)
T cd05601 235 K---VSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW 271 (330)
T ss_pred C---CCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence 1 11245667778997 9999999999999999876443
No 139
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=4.8e-30 Score=259.73 Aligned_cols=229 Identities=21% Similarity=0.320 Sum_probs=170.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|.+...... .....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-DAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-chhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 57888899999999999999875 7888999987642221 122356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc----c------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSND----A------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~----~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++|+|...+... . ...|.||||+||+++.++.+||+|||+++......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 9999999998876421 0 01133999999999999999999999998765433
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.......|++.|+||| ++.++|||||||++|||++|+.|+..... ......+.. .....+..+. + .
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~~~~~~--~---~ 232 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKI-EKCDYPPLPA--D---H 232 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc--cHHHHHhhh-hcCCCCCCCh--h---h
Confidence 3334467899999999 45689999999999999999999742210 000111100 0100111111 0 1
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+++.+||..+|++|||+.+|++.+...
T Consensus 233 ~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 233 YSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 223566888899999999999999999988653
No 140
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.1e-30 Score=265.96 Aligned_cols=224 Identities=26% Similarity=0.401 Sum_probs=168.1
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.. .++..+|+|.+..... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 44556799999999999975 4577899998764321 2234578999999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 502 YLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
|+++|+|.+.+..... ..|.||+|+||+++.++.+|++|||+++.............
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 162 (277)
T cd06642 83 YLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 162 (277)
T ss_pred ccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhccc
Confidence 9999999887754321 11349999999999999999999999987654333334457
Q ss_pred ccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 559 GTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 559 Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
|+..|+||| ++.++|||||||++|||+||+.|+....... .. ........+..+. .....+.+
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~-~~~~~~~~~~~~~------~~~~~~~~ 231 (277)
T cd06642 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VL-FLIPKNSPPTLEG------QYSKPFKE 231 (277)
T ss_pred CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----HH-hhhhcCCCCCCCc------ccCHHHHH
Confidence 899999999 3568999999999999999999975221100 00 0000001111111 12235678
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
++.+||+.+|++||+|.+++++.++...
T Consensus 232 li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 232 FVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 8889999999999999999999987643
No 141
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.3e-30 Score=268.11 Aligned_cols=227 Identities=23% Similarity=0.381 Sum_probs=171.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|+..+.||+|+||.||+|.. .++..+|+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 5788889999999999999985 5688999998864322 2335688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...........
T Consensus 95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 174 (297)
T cd06656 95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (297)
T ss_pred ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence 99999999988765321 1123499999999999999999999999876544333344
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|++.|+||| ++.++|||||||++|||+||+.||........... .......+...+. .....+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~ 245 (297)
T cd06656 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------IATNGTPELQNPE--RLSAVF 245 (297)
T ss_pred ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-------eccCCCCCCCCcc--ccCHHH
Confidence 67899999999 35689999999999999999999853221100000 0000000000111 111235
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+++.+||+.+|++||++++++++.|+...
T Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 246 RDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 678889999999999999999999888643
No 142
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.4e-30 Score=266.60 Aligned_cols=232 Identities=21% Similarity=0.328 Sum_probs=169.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|.+.... .....+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 36888899999999999999764 56778888775432 123345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++..... ..
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~ 155 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 155 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--cc
Confidence 99999999988874321 1224599999999999999999999999765332 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------------------
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM---------------------- 606 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---------------------- 606 (667)
....|++.|+||| ++.++|||||||++|||+||+.|+........ ......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccccCCcccccCCCCCcc
Confidence 4467899999999 45689999999999999999999742110000 000000
Q ss_pred -------hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 -------RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..........+ ..+. ......+.+++.+||..+|++|||+.||+++.|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPP-KLPS-GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCc-cCcC-cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000 0000 0012246788999999999999999999999998753
No 143
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=1.1e-31 Score=279.84 Aligned_cols=221 Identities=22% Similarity=0.321 Sum_probs=159.0
Q ss_pred ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIE-ALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+.. ++..+|+|.+...... .......+.+|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36899999999999865 5678999987642111 1122234555554 5678999999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+.+.... ...|.||||+|||++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 159 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT 159 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence 999988775421 11244999999999999999999999998644333334557899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.||||| |+.++|||||||++|||++|+.||...... ......... ....++.. ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~--~~~~~~~~------~~~~~~li 227 (325)
T cd05602 160 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA----EMYDNILNK--PLQLKPNI------TNSARHLL 227 (325)
T ss_pred ccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH----HHHHHHHhC--CcCCCCCC------CHHHHHHH
Confidence 9999999 577999999999999999999998532211 111111011 01111111 12356777
Q ss_pred HhccccCCCCCCCHH----HHHHHHHHhhh
Q 042735 635 FSCLDVSPESRPTMQ----TITQQLLFSLV 660 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~----ev~~~l~~~~~ 660 (667)
.+|++.+|.+||++. ++.++.++...
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 228 EGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred HHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 899999999999865 67777766543
No 144
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=2.4e-30 Score=263.90 Aligned_cols=229 Identities=23% Similarity=0.349 Sum_probs=168.5
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|.. .++..+|+|.+..... ....+.|.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT---VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC---hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 567788999999999999975 5678899998754321 233457999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccc--------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 501 EYLKRGSLATNLSND--------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 501 ey~~~g~L~~~l~~~--------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
||+++|+|....... ....|.||||+||+++.++.+||+|||++...... ......||
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~ 156 (279)
T cd06619 79 EFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGT 156 (279)
T ss_pred ecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCCCCC
Confidence 999999986432210 11224499999999999999999999999865432 23446899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh--hhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN--MRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
..|+||| ++.++|||||||++|||+||+.||.............. ........+..+... ...++.+
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 231 (279)
T cd06619 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQ-----FSEKFVH 231 (279)
T ss_pred hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCc-----CCHHHHH
Confidence 9999999 45689999999999999999999853221111000000 000001111111111 1124678
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
++.+||+.+|++||+++|++++.|+...
T Consensus 232 li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 232 FITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred HHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 8889999999999999999999887543
No 145
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=4.4e-30 Score=261.62 Aligned_cols=223 Identities=19% Similarity=0.370 Sum_probs=164.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|+..+.||+|+||.||+|... .+..+|||++.... ......+|.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 467889999999999999999753 24579999875422 123345799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC----------------------------------CcccccccCCeeecCCCceEEe
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA----------------------------------AEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------~~~~dlk~~NiLld~~~~~kl~ 539 (667)
...++||||+++|+|.+++..... ..|.||||+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 999999999999999988753110 1123999999999999999999
Q ss_pred cccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhcc
Q 042735 540 DFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDE 610 (667)
Q Consensus 540 DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 610 (667)
|||+++........ .....+++.||||| ++.++|||||||++|||+| |+.||..... ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----~~~~~~---- 233 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----EQVLRF---- 233 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH----
Confidence 99999755332211 11234578899999 3668999999999999999 6888753211 111111
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
......+..... ....+.+++.+||+.+|++|||+.|+++.+.
T Consensus 234 ~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHcCCcCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111111111111 1235678889999999999999999998864
No 146
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.97 E-value=4.6e-30 Score=259.05 Aligned_cols=221 Identities=27% Similarity=0.492 Sum_probs=165.7
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|...++..+|+|.+.... ...++|.+|++++++++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 4678889999999999999998777889999876432 12456899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+++.... . ..|.||||+||++++++.+||+|||+++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 9999999998875432 0 112399999999999999999999999876532211
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+|||+ +.++|||||||++|||+| |+.||..... ..... ....... .+.+ . ..
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~~~~--~~~~-~---~~ 229 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVLQ-QVDQGYR--MPCP-P---GC 229 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHH-HHHcCCC--CCCC-C---cC
Confidence 111223457999994 568999999999999999 9988753221 11111 1111111 1111 1 11
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++||++.++.+.|..
T Consensus 230 ~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 230 PKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 2356788899999999999999999998763
No 147
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=1.1e-30 Score=267.95 Aligned_cols=233 Identities=24% Similarity=0.361 Sum_probs=172.4
Q ss_pred cCHHHHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEE
Q 042735 411 FDYVEIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYG 488 (667)
Q Consensus 411 ~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g 488 (667)
+++.++..++++|+..+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++.++ +|||++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 45566667788999999999999999999976 567889999875421 1234677899999999 7999999999
Q ss_pred EEEeC-----CceEEEEEecCCCChHHHhccc-----c-----------------------CCcccccccCCeeecCCCc
Q 042735 489 FCSHA-----RHSILIYEYLKRGSLATNLSND-----A-----------------------AAEELDISSKNVLLDLEHK 535 (667)
Q Consensus 489 ~~~~~-----~~~~lv~ey~~~g~L~~~l~~~-----~-----------------------~~~~~dlk~~NiLld~~~~ 535 (667)
++... +..++||||+++|+|.+.+... . ...|.||||+||+++.++.
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC
Confidence 98754 3589999999999998776421 0 0113399999999999999
Q ss_pred eEEecccccccccCCCCCcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh
Q 042735 536 AHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI 604 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~ 604 (667)
+||+|||+++.............|+..|+|||+ +.++|||||||++|||+||+.|+...... ....
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~~~ 243 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KTLF 243 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HHHH
Confidence 999999999876543322334578999999993 56899999999999999999997532211 0010
Q ss_pred hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 605 NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
. ......+....+ ......+.+++.+||+.+|++||++.|++++.|+
T Consensus 244 ~--~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 244 K--IPRNPPPTLLHP----EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred H--HhcCCCCCCCcc----cccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 0 000001111111 1122357788899999999999999999998775
No 148
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=6.4e-30 Score=263.18 Aligned_cols=227 Identities=25% Similarity=0.333 Sum_probs=164.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-Cc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|...+ +. .+++|.++.... ....+.|.+|++++.++ +||||+++++++.+.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS---ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC---HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 578888999999999999998644 32 468887653221 22345789999999999 699999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeecCCCce
Q 042735 497 ILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLDLEHKA 536 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld~~~~~ 536 (667)
++||||+++|+|.+++.... ...|.||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 99999999999998875421 01133999999999999999
Q ss_pred EEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhc
Q 042735 537 HVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLD 609 (667)
Q Consensus 537 kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 609 (667)
||+|||++........ ......+..|+||| ++.++|||||||++|||+| |+.||..... ....... .
T Consensus 159 kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~----~~~~~~~-~ 232 (297)
T cd05089 159 KIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC----AELYEKL-P 232 (297)
T ss_pred EECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH-h
Confidence 9999999874322111 11223356799999 4678999999999999998 9999753211 1111111 1
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
....+..+... ...+.+++.+||+.+|.+|||+++++++|......+
T Consensus 233 ~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 233 QGYRMEKPRNC------DDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred cCCCCCCCCCC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111111111 124668888999999999999999999988776544
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=2.1e-30 Score=290.75 Aligned_cols=227 Identities=25% Similarity=0.353 Sum_probs=165.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... .++.||+|++...... .....++|.+|++++++++|||||++++++.+.+..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~-~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE-NPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccccc-CHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 57888999999999999999864 5788999998754322 223356799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc-----------------------------------cCCcccccccCCeeecCCCceEEeccccc
Q 042735 500 YEYLKRGSLATNLSND-----------------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-----------------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
|||+++|+|.+.+... ....|.||||+||+++.++.+||+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999998876421 01123499999999999999999999999
Q ss_pred ccccCCC------------------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 042735 545 KFLKPDS------------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS 600 (667)
Q Consensus 545 ~~~~~~~------------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~ 600 (667)
+...... ......+||+.||||| ++.++|||||||++|||+||+.||......
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~--- 237 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR--- 237 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh---
Confidence 8652110 0012357999999999 467899999999999999999998532210
Q ss_pred hhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHHH
Q 042735 601 PSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT-MQTITQQLLF 657 (667)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt-~~ev~~~l~~ 657 (667)
.... .....++....+. ......+.+++.+|++.+|++||+ ++++.+.+..
T Consensus 238 -ki~~--~~~i~~P~~~~p~---~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 238 -KISY--RDVILSPIEVAPY---REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred -hhhh--hhhccChhhcccc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000 0011111111111 111234667888999999999965 5555555443
No 150
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-33 Score=257.64 Aligned_cols=223 Identities=24% Similarity=0.330 Sum_probs=164.9
Q ss_pred cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHH-hcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 426 KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALT-KIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
...||.|+||+|++-.+ ++|+..|||++..... ..+++++..|.+... .-+.||||++||.+..++..|+.||.|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 35789999999999865 6799999999876432 456788999998654 556999999999999999999999998
Q ss_pred CCCChHHHhc------c------------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 504 KRGSLATNLS------N------------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 504 ~~g~L~~~l~------~------------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
.- |+..+.. . .-...|.|+||+|||+|..|.+|+||||++..+... ..
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-iA 223 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-IA 223 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-HH
Confidence 63 4433211 0 001124599999999999999999999999876532 22
Q ss_pred cccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 554 WSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.+.-+|-..||||| |+-+|||||+|++|||++||+.|+..+..+..+... ...-||.......+...
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~-----Vv~gdpp~l~~~~~~~~ 298 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ-----VVIGDPPILLFDKECVH 298 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH-----HHcCCCCeecCcccccc
Confidence 34567889999999 778999999999999999999998644332211110 01113322222233333
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+..++..|+-+|-..||...++.+..+..
T Consensus 299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 299 YSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred cCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 455788899999999999999999998876554
No 151
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=3.8e-30 Score=269.21 Aligned_cols=225 Identities=27% Similarity=0.407 Sum_probs=164.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|...+.||+|+||.||+|... .++.||+|++..... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 36778899999999999999642 246799998864322 22345688999999999 799999999988654
Q ss_pred -CceEEEEEecCCCChHHHhcccc--------------------------------------------------------
Q 042735 494 -RHSILIYEYLKRGSLATNLSNDA-------------------------------------------------------- 516 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 516 (667)
...+++|||+++|+|.+.+....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 56889999999999988774211
Q ss_pred -----------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC--cccccccccccC
Q 042735 517 -----------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVA 565 (667)
Q Consensus 517 -----------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~a 565 (667)
...|.||||+||+++.++.+||+|||+++.+...... .....++..|+|
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 0113399999999999999999999999876433221 223456778999
Q ss_pred CC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhcc
Q 042735 566 PD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCL 638 (667)
Q Consensus 566 PE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl 638 (667)
|| |+.++|||||||++|||+| |+.||..... .... ............+. ....++.+++.+||
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~------~~~~~~~~l~~~cl 313 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI---DEEF-CRRLKEGTRMRAPE------YATPEIYSIMLDCW 313 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc---cHHH-HHHHhccCCCCCCc------cCCHHHHHHHHHHc
Confidence 99 5779999999999999998 9999753211 1111 01111111111111 12235778899999
Q ss_pred ccCCCCCCCHHHHHHHHHHh
Q 042735 639 DVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 639 ~~~p~~RPt~~ev~~~l~~~ 658 (667)
+.+|++||++.||+++|...
T Consensus 314 ~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 314 HNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred cCChhhCcCHHHHHHHHHHH
Confidence 99999999999999998764
No 152
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.3e-31 Score=279.31 Aligned_cols=221 Identities=21% Similarity=0.304 Sum_probs=160.9
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIE-ALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|+. .++..+|+|++....... ....+.+.+|.. +++.++||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 3689999999999976 567889999876432111 123345666665 4677999999999999999999999999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|...+..... ..|.||||+|||++.++.+||+|||+++............+||
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT 159 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence 9999877653221 1234999999999999999999999998643333334456899
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.||||| |+.++|||||||++|||+||+.||..... .......... ....++.. ...+.+++
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~----~~~~~~~~~~--~~~~~~~~------~~~~~~ll 227 (325)
T cd05604 160 PEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV----AEMYDNILHK--PLVLRPGA------SLTAWSIL 227 (325)
T ss_pred hhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH----HHHHHHHHcC--CccCCCCC------CHHHHHHH
Confidence 9999999 56789999999999999999999853221 1111111111 11111111 12456788
Q ss_pred HhccccCCCCCCCH----HHHHHHHHHhhh
Q 042735 635 FSCLDVSPESRPTM----QTITQQLLFSLV 660 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~----~ev~~~l~~~~~ 660 (667)
.+|++.+|.+||++ .+++++.||...
T Consensus 228 ~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 228 EELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred HHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 89999999999976 578887777643
No 153
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=3.3e-30 Score=264.73 Aligned_cols=227 Identities=22% Similarity=0.369 Sum_probs=169.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|+..+.||+|+||.||+|+.. ++..+++|.+... .....+.+.+|++++++++||||+++++++..+...++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 45777889999999999999875 4788999987542 223456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|...+.... ...|.|+||+||+++.++.+||+|||++..........
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 167 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR 167 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence 99999999977653211 11234999999999999999999999987644332233
Q ss_pred ccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 555 SALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
....|++.|+|||+ +.++|||||||++|||+||+.|+...... ... ........+....+.
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~-~~~~~~~~~~~~~~~--- 239 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVL-LKIAKSEPPTLSQPS--- 239 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HHH-HHHhcCCCccCCCCc---
Confidence 44578999999994 34799999999999999999997532210 000 011111111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.+++.+||+.+|++||+++|++++.++..+
T Consensus 240 -~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 240 -KWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred -ccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 112346778889999999999999999999887644
No 154
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=7.8e-30 Score=260.03 Aligned_cols=223 Identities=22% Similarity=0.371 Sum_probs=160.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|+..+.||+|+||.||+|.+. ++. .+++|.+.... ......++..|+..+++++|||||+++|++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS---GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc---chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 46778889999999999999864 343 36777764321 12233568889999999999999999998854 55
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++++||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 7889999999999988854211 123499999999999999999999999875433
Q ss_pred CC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. ..+...|+..|+||| |+.++|||||||++||++| |+.||..... .......... ...+.+ .
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~--~~~~~~-~ 234 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-----HEVPDLLEKG--ERLAQP-Q 234 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCC--CcCCCC-C
Confidence 22 123456778999999 4678999999999999998 9999753221 1101111111 111111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. ....+.+++.+||..+|++|||++|+++.+...
T Consensus 235 ~---~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 235 I---CTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred C---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1 122456788899999999999999999987664
No 155
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=251.30 Aligned_cols=227 Identities=21% Similarity=0.311 Sum_probs=171.6
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|+..++||+|.|+.||++. .++|+.+|+|.+.....+.. +.+...+|++|.+.++|||||++...+.+....|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456677789999999999985 56788899998875544332 456788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcc------------------------ccCCcccccccCCeeecC---CCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSN------------------------DAAAEELDISSKNVLLDL---EHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~------------------------~~~~~~~dlk~~NiLld~---~~~~kl~DFGla~~~~~~~~ 552 (667)
+|+|+||+|..-+-. .....|.|+||+|+++.. .--+|++|||+|..+. +..
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~ 167 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGE 167 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-Ccc
Confidence 999999999543211 112235599999999953 3458999999999887 555
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.+..++|||+||||| |...+|||+.|||||-++.|..||...+....+. .+.......+.+++...
T Consensus 168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye--------~I~~g~yd~~~~~w~~i 239 (355)
T KOG0033|consen 168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYE--------QIKAGAYDYPSPEWDTV 239 (355)
T ss_pred ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHH--------HHhccccCCCCcccCcC
Confidence 677789999999999 7888999999999999999999985322111111 11111111111122222
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+..+++.+++..||.+|-|+.|.+++.|-.
T Consensus 240 s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 240 TPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred CHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 22445777899999999999999999998865
No 156
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=2.6e-31 Score=281.09 Aligned_cols=233 Identities=24% Similarity=0.327 Sum_probs=166.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. ++..+|+|++...... .......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-EKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 46888899999999999999764 5788999987542111 112345688899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC----
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS---- 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~---- 551 (667)
|||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 999999999988754321 1234999999999999999999999987543210
Q ss_pred -------------------------------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCC
Q 042735 552 -------------------------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFV 594 (667)
Q Consensus 552 -------------------------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~ 594 (667)
......+||+.|+||| |+.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 0012357999999999 678999999999999999999998532
Q ss_pred ccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCC---CHHHHHHHHHHhhhhhc
Q 042735 595 SSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRP---TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RP---t~~ev~~~l~~~~~~~~ 663 (667)
.. ................++..+. .. ++.+++.+++ .+|.+|+ +++|++++.||..+.|.
T Consensus 240 ~~----~~~~~~i~~~~~~~~~p~~~~~-s~---~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 302 (360)
T cd05627 240 TP----QETYRKVMNWKETLVFPPEVPI-SE---KAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWG 302 (360)
T ss_pred CH----HHHHHHHHcCCCceecCCCCCC-CH---HHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCCHH
Confidence 21 0111110000001111211111 11 2344555544 4899998 58999999998876543
No 157
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=2.6e-30 Score=261.71 Aligned_cols=228 Identities=22% Similarity=0.322 Sum_probs=169.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|.. .++..+|||++..... .......+|.+|++++++++||||+++++++.+++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 4677888999999999999985 5788999998754322 1223446789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc----c------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSND----A------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~----~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++++|.+++... . ...|.||||+||+++.++.+||+|||+++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 9999999998876421 0 01123999999999999999999999998765443
Q ss_pred CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.......|+..|+|||+ +.++||||||+++|||++|+.||...... ..... ........+..+. . .
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~-~~~~~~~~~~~~~---~--~ 232 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLC-KKIEQCDYPPLPS---D--H 232 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch--HHHHh-hhhhcCCCCCCCc---c--c
Confidence 33344678999999993 56799999999999999999997422110 00000 1111111111111 1 1
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+++.+||+.+|++||||.+|++.+..
T Consensus 233 ~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 233 YSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 22356778889999999999999999887654
No 158
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=2.2e-30 Score=262.61 Aligned_cols=219 Identities=24% Similarity=0.389 Sum_probs=152.9
Q ss_pred eeecccCeEEEEEEeCC---CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAELPS---KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~---~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|...+ ...+++|.+.... .......|.+|+++++.++||||++++|++.+.+..++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999997543 3457788765322 22334578999999999999999999999999999999999999
Q ss_pred CCChHHHhccccC-----------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--C
Q 042735 505 RGSLATNLSNDAA-----------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--N 553 (667)
Q Consensus 505 ~g~L~~~l~~~~~-----------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--~ 553 (667)
+|+|.+++..... ..|.||||+||+++.++.+||+|||+++....... .
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999988754211 11339999999999999999999999975432211 1
Q ss_pred cccccccccccCCCC-------------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 554 WSALVGTYRYVAPDY-------------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-------------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.....+++.|+|||+ +.++|||||||++|||++ |+.||..... ......... ..+..++.+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~----~~~~~~~~~-~~~~~~~~~ 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD----EQVLKQVVR-EQDIKLPKP 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH----HHHHHHHhh-ccCccCCCC
Confidence 123346778999993 458999999999999999 7778753221 011111111 111111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
... ......+.+++..|| .+|++|||++||.+.+.
T Consensus 234 ~~~-~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 QLD-LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccc-ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 100 011123456677898 59999999999998763
No 159
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=1e-29 Score=254.66 Aligned_cols=215 Identities=23% Similarity=0.399 Sum_probs=160.5
Q ss_pred eeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 428 CIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
.||+|+||.||+|...++..+|+|.+..... ......|.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP---QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 6899999999999988888999998765432 2234568999999999999999999999999999999999999999
Q ss_pred hHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-cccccccc
Q 042735 508 LATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-WSALVGTY 561 (667)
Q Consensus 508 L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-~~~~~Gt~ 561 (667)
|.+++..... ..|.|+||+||+++.++.+||+|||+++........ .....+++
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 9887753211 113499999999999999999999999754332211 11234467
Q ss_pred cccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 562 RYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 562 ~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
.|+|||+ +.++|||||||++||+++ |..||..... ... ............+.. ....+.+++
T Consensus 159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~----~~~-~~~~~~~~~~~~~~~------~~~~~~~li 227 (250)
T cd05085 159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN----QQA-REQVEKGYRMSCPQK------CPDDVYKVM 227 (250)
T ss_pred cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH----HHH-HHHHHcCCCCCCCCC------CCHHHHHHH
Confidence 8999993 568999999999999999 9989753221 111 111111111111111 123567888
Q ss_pred HhccccCCCCCCCHHHHHHHHH
Q 042735 635 FSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.+||+.+|++||++.|+.+.+.
T Consensus 228 ~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 228 QRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHcccCcccCCCHHHHHHHhc
Confidence 9999999999999999998863
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=1.5e-30 Score=269.38 Aligned_cols=235 Identities=17% Similarity=0.283 Sum_probs=167.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. ++..+|+|++...... .....+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 56888899999999999999864 5778999988643221 1234578899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||+++.........
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 999985 7766553221 11244999999999999999999999998654333333
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh----------hhh---ccccCC
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN----------MRL---DEMLDP 614 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~----------~~~---~~~~~~ 614 (667)
....||+.|+||| ++.++|||||||++|||+||+.||.............. ... ....+.
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 4457899999999 35679999999999999999999853221000000000 000 000000
Q ss_pred CCCCCCC-----chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 615 RLPPPSP-----DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 615 ~~~~~~~-----~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+...+ ........+.+++.+|++.||++|||++|++++.|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 0000000 00011124568889999999999999999999999975
No 161
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=6.9e-30 Score=262.13 Aligned_cols=226 Identities=27% Similarity=0.443 Sum_probs=167.7
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.+|...+.||+|+||.||+|+.. ++..+++|.+... .....+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 45777889999999999999742 3456888887542 2234467999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeecCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLDLEH 534 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld~~~ 534 (667)
..++||||+++|+|.+++..... ..|.||||+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 99999999999999988753210 11239999999999999
Q ss_pred ceEEecccccccccCCCC--CcccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
.+||+|||+++....... ......|+..|+|||+ +.++|||||||++|||+| |+.||..... .....
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~ 236 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN----TEVIE 236 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence 999999999986543221 1223457889999993 568999999999999999 9999753221 11111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+.....+..... ....+.+++.+||+.+|++|||+++|++.+......
T Consensus 237 ----~~~~~~~~~~~~~---~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 237 ----CITQGRVLERPRV---CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ----HHhCCCCCCCCcc---CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111111111111 123567888999999999999999999999877543
No 162
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=8.5e-30 Score=256.51 Aligned_cols=216 Identities=25% Similarity=0.381 Sum_probs=158.4
Q ss_pred eeecccCeEEEEEEe---CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAEL---PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|.+ .++..+|+|++..... .....++|.+|+.++++++||||++++|++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999965 3467899998764322 2234567999999999999999999999885 456789999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC---cccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN---WSAL 557 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~---~~~~ 557 (667)
+|+|.+++..... ..|.||||+||+++.++.+||+|||+++........ ....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence 9999888754221 123499999999999999999999999876443221 1223
Q ss_pred cccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 558 VGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 558 ~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+++.|+||| ++.++|||||||++|||+| |+.||..... ..... .+.....+..+... ...+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~-~i~~~~~~~~~~~~------~~~l 227 (257)
T cd05116 159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG----NEVTQ-MIESGERMECPQRC------PPEM 227 (257)
T ss_pred CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHCCCCCCCCCCC------CHHH
Confidence 4467899999 3558999999999999998 9999863221 11111 11111111222211 2246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+++.+||+.+|++||++++|.+.|..
T Consensus 228 ~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 228 YDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 678889999999999999999998864
No 163
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=8.4e-30 Score=255.71 Aligned_cols=215 Identities=23% Similarity=0.400 Sum_probs=158.0
Q ss_pred eeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCC
Q 042735 428 CIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRG 506 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g 506 (667)
.||+|+||.||+|.. .+++.+|+|.+..... ......|.+|++++++++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLP---PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 589999999999986 4678899998754322 233457999999999999999999999999999999999999999
Q ss_pred ChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc--ccccc
Q 042735 507 SLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW--SALVG 559 (667)
Q Consensus 507 ~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~--~~~~G 559 (667)
+|.+++..... ..|.||||+||+++.++.+||+|||+++......... ....+
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 99988754221 1133999999999999999999999998654321111 11123
Q ss_pred cccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 560 TYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 560 t~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
+..|+|||+ +.++|||||||++|||++ |..|+..... ... ............+. .....+.+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~----~~~-~~~~~~~~~~~~~~------~~~~~~~~ 227 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN----QQT-REAIEQGVRLPCPE------LCPDAVYR 227 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH----HHH-HHHHHcCCCCCCcc------cCCHHHHH
Confidence 457999993 567999999999999998 8888753221 001 01111111111111 11235678
Q ss_pred HHHhccccCCCCCCCHHHHHHHHH
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
++.+||+.+|++|||+.|+.+.|.
T Consensus 228 li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 228 LMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHh
Confidence 889999999999999999998874
No 164
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=6.9e-30 Score=258.11 Aligned_cols=221 Identities=24% Similarity=0.412 Sum_probs=164.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|+..+.||+|+||.||+|... .+..+|+|.+... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 35778889999999999999864 4778999987542 12345789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 99999999998775321 0113499999999999999999999999876533211
Q ss_pred c-ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 554 W-SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 554 ~-~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
. ....+++.|+||| ++.++|||||||++|||+| |..|+..... .... ........+..+..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----~~~~-~~~~~~~~~~~~~~------ 229 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVY-ELLEKGYRMERPEG------ 229 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHH-HHHHCCCCCCCCCC------
Confidence 1 1223466899999 3568999999999999998 8888753211 1110 11111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+.+++.+||+.+|++|||+.++.+.+..
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 12356778889999999999999999998764
No 165
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=5.2e-30 Score=263.77 Aligned_cols=228 Identities=21% Similarity=0.354 Sum_probs=164.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-----------------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-----------------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-----------------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 483 (667)
.+|+..+.||+|+||.||+|.... +..+|+|++..... ....+.|.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS---DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhcCCCCE
Confidence 578888999999999999987543 23578898764322 2345679999999999999999
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHHhcccc-----------------------------------CCcccccccCCe
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATNLSNDA-----------------------------------AAEELDISSKNV 528 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----------------------------------~~~~~dlk~~Ni 528 (667)
+++++++...+..++||||+++++|.+++.... ...|.||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999988775432 011339999999
Q ss_pred eecCCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh--CCCCCCCCccCC
Q 042735 529 LLDLEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK--GKHPRGFVSSIL 598 (667)
Q Consensus 529 Lld~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt--G~~p~~~~~~~~ 598 (667)
+++.++.+||+|||+++....... ......+|+.||||| ++.++|||||||++|||++ |..|+.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-- 239 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-- 239 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--
Confidence 999999999999999986543221 122345678999999 3678999999999999998 6667643221
Q ss_pred CChhhhhhhhccccC-CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 599 PSPSVINMRLDEMLD-PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...... ...... .......+.......++.+++.+||+.+|++|||+.||.+.|.
T Consensus 240 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 --QQVIEN-AGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred --HHHHHH-HHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111 111100 0000000000011235778999999999999999999998875
No 166
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=1.1e-29 Score=260.66 Aligned_cols=223 Identities=26% Similarity=0.419 Sum_probs=163.8
Q ss_pred CCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
+|...+.||+|+||.||+|... ....+++|.+..... ....+.+.+|+.++++++|||||++++++...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC
Confidence 4667789999999999999752 224688887754322 2234578999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------------------------------CCcccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------------------------------AAEELDISSKN 527 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------------------------------~~~~~dlk~~N 527 (667)
.++|+||+++|+|.+++.... ...|.||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 999999999999998764310 01123999999
Q ss_pred eeecCCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCC
Q 042735 528 VLLDLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSIL 598 (667)
Q Consensus 528 iLld~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~ 598 (667)
|++++++.+||+|||+++........ .....++..|+||| ++.++||||||+++|||+| |+.||....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 99999999999999999865432211 12335677899999 4678999999999999999 998875321
Q ss_pred CChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 599 PSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+...............+. .....+.+++.+||+.+|++||+++|+++.|...
T Consensus 235 --~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 235 --PERLFNLLKTGYRMERPE------NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred --HHHHHHHHhCCCCCCCCC------CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 111111111111111111 1123567888999999999999999999988764
No 167
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=1.1e-29 Score=258.58 Aligned_cols=225 Identities=24% Similarity=0.371 Sum_probs=169.7
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.. .++..+|+|....... ....+.|.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 56678899999999999975 4678899998754321 2334578899999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 502 YLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
|+++|+|.+++..... ..|.|+||+||+++.++.++|+|||+++.............
T Consensus 83 ~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 162 (277)
T cd06641 83 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 162 (277)
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence 9999999887754321 12349999999999999999999999987654333334457
Q ss_pred ccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 559 GTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 559 Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
|+..|+|||+ +.++|||||||++|||+||+.|+...... .... .......+..+.. ....+.+
T Consensus 163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~------~~~~~~~ 231 (277)
T cd06641 163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM----KVLF-LIPKNNPPTLEGN------YSKPLKE 231 (277)
T ss_pred CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH----HHHH-HHhcCCCCCCCcc------cCHHHHH
Confidence 8999999994 45799999999999999999997532210 0000 0000001111111 1234667
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
++.+||+.+|++||++.+++++.++....
T Consensus 232 ~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 232 FVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 88899999999999999999998886543
No 168
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=2.1e-30 Score=264.47 Aligned_cols=227 Identities=23% Similarity=0.374 Sum_probs=170.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|.+... .....+.|.+|++++++++||||+++++++..+...++|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 46778888999999999999874 5788999987532 223446799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+++.... ...|.|+||+||+++.++.+||+|||++..........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 99999999988775421 01134999999999999999999999987654433333
Q ss_pred ccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 555 SALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
....||+.|+|||+ +.++|||||||++|||++|+.||...... .... .......+....+.
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~~~--~~~~~~~~~~~~~~--- 232 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RVLL--KILKSEPPTLDQPS--- 232 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HHHH--HHhcCCCCCcCCcc---
Confidence 45678999999993 34799999999999999999998633211 0000 01111111111110
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.+++.+||+.+|++||++.+++++.|+...
T Consensus 233 -~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 233 -KWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -cCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 112246678889999999999999999999988654
No 169
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=1.9e-30 Score=265.05 Aligned_cols=226 Identities=19% Similarity=0.328 Sum_probs=167.1
Q ss_pred CcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.... +..+++|.+... .....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 3556779999999999998754 667888877532 12345678999999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|+++|+|...+.... ...|.||||+||+++.++.+||+|||+++...........
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 999999987664311 1113499999999999999999999999765433223344
Q ss_pred ccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 557 LVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 557 ~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
..||+.|+|||+ +.++|||||||++|||++|+.|+...... ...... .....+....+. .
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~~~--~~~~~~~~~~~~----~ 233 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM---RVLLKI--AKSEPPTLAQPS----R 233 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH---HHHHHH--hhcCCCCCCCcc----c
Confidence 678999999994 24799999999999999999997532210 000110 011111111111 1
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
....+.+++.+||+.+|++||++++++++.++....
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 123567888899999999999999999998876543
No 170
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.2e-30 Score=271.58 Aligned_cols=228 Identities=21% Similarity=0.317 Sum_probs=167.6
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv 499 (667)
+|+..+.||+|+||.||+|+. .++..||+|++...... .....+.+..|++++..+. |++|+++++++.+.+..++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 467788999999999999986 45788999987643211 1123356788999998886 57888899999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++..........
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99999999988765421 112349999999999999999999999986443333334
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...||+.|+||| |+.++|||||||++|||+||+.||..... ......... .....+... ...
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~--~~~~~p~~~------~~~ 227 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSIME--HNVSYPKSL------SKE 227 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHh--CCCCCCccC------CHH
Confidence 567999999999 56789999999999999999999863221 111111110 111122111 124
Q ss_pred HHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhh
Q 042735 630 IMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYF 662 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~ 662 (667)
+.+++.+||+.+|.+|++ .+++.++.+|....+
T Consensus 228 ~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 228 AVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred HHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 567888999999999997 478888877765543
No 171
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=271.08 Aligned_cols=216 Identities=24% Similarity=0.442 Sum_probs=164.2
Q ss_pred cceeecccCeEEEEEEeC--CCc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 426 KYCIGSGRHGSVYRAELP--SKE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~--~~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
.+.||+|.||.|++|.|. +|+ .||||.+....... ....|.+|+.+|.+|+|||+|++||+..+ ...++|+|
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~---~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA---IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch---hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 457999999999999874 343 58999987654432 45689999999999999999999999988 67889999
Q ss_pred ecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
.++.|+|.+.|+.... ..|.||.++|+||-..-.+||+|||+.|.+......+
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y- 269 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY- 269 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcce-
Confidence 9999999999986211 1134999999999999999999999999887655433
Q ss_pred cccc----cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 556 ALVG----TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 556 ~~~G----t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
+..+ ...|.||| |+.++|||+|||++|||+| |+.||-....+ .+-..++ -..+++.+ +.
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----qIL~~iD--~~erLpRP-k~-- 339 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----QILKNID--AGERLPRP-KY-- 339 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----HHHHhcc--ccccCCCC-CC--
Confidence 2222 35799999 6789999999999999999 77887533321 1111111 11223322 12
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+...+.+++..||..+|++||||..|.+.+..
T Consensus 340 -csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 340 -CSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred -ChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 23467889999999999999999999866544
No 172
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=4.7e-30 Score=259.72 Aligned_cols=228 Identities=26% Similarity=0.423 Sum_probs=170.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||.|+||+||+|.. .++..+|+|++...... ...+.+.+|+++++.++||||+++++.+...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 4688889999999999999985 45778999987643322 2456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC---------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++++|.+.+..... ..|.|+||+||++++++.+||+|||++........
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999888754211 11339999999999999999999999987654332
Q ss_pred C----cccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 553 N----WSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 553 ~----~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
. .....|+..|+|||+ +.++|||||||++|||+||+.||........ ....... ..+..+...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~- 231 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV----LMLTLQN-DPPSLETGA- 231 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh----HHHHhcC-CCCCcCCcc-
Confidence 2 134578999999993 4579999999999999999999864322111 1111110 111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
........+.+++.+||+.+|++|||++|++++.||
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 232 DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 001122356788889999999999999999998764
No 173
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=6.9e-30 Score=262.82 Aligned_cols=229 Identities=22% Similarity=0.361 Sum_probs=162.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-----------------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-----------------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-----------------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 483 (667)
++|+..+.||+|+||.||+|+.. ++..+|+|++.... .....+.|.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCc
Confidence 46888899999999999998532 23468999876432 12334679999999999999999
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHHhcccc-----------------------------------CCcccccccCCe
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATNLSNDA-----------------------------------AAEELDISSKNV 528 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----------------------------------~~~~~dlk~~Ni 528 (667)
+++++++...+..++||||+++|+|.+++.... ...|.||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999988875421 011339999999
Q ss_pred eecCCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh--CCCCCCCCccCC
Q 042735 529 LLDLEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK--GKHPRGFVSSIL 598 (667)
Q Consensus 529 Lld~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt--G~~p~~~~~~~~ 598 (667)
+++.++.+||+|||+++....... ......+++.|+||| ++.++|||||||++|||+| |..|+.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999986543221 112234467899998 4679999999999999998 667764322110
Q ss_pred CChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 599 PSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
..................+.+. . ....+.+++.+||+.+|++||+++||.+.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 VIENTGEFFRDQGRQVYLPKPA-L---CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHhhccccccCCCCC-C---CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000000000000111111 1 1135678889999999999999999998875
No 174
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.3e-30 Score=276.96 Aligned_cols=236 Identities=21% Similarity=0.306 Sum_probs=167.3
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----c
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-----H 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-----~ 495 (667)
+|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+++++.++||||+++++++...+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 578889999999999999986 5688999998864322 2233457889999999999999999999998776 7
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+. ++|.+.+.... ...|.||||+|||++.++.+||+|||+++......
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 899999997 46766553221 12245999999999999999999999998654332
Q ss_pred C-CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC---------hhhhhh-----hhc
Q 042735 552 S-NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS---------PSVINM-----RLD 609 (667)
Q Consensus 552 ~-~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~---------~~~~~~-----~~~ 609 (667)
. ..+...||+.|+||| |+.++|||||||++|||+||+.||......... +..... ...
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 2 223456899999999 456899999999999999999998632211000 000000 000
Q ss_pred c-cc-CCCCCCCCC----chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 610 E-ML-DPRLPPPSP----DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 610 ~-~~-~~~~~~~~~----~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. +. .+..++... .......++.+++.+||+.||++|||+.|++++.|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 0 00 000000000 000112356788899999999999999999999998763
No 175
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=6.8e-30 Score=256.86 Aligned_cols=219 Identities=25% Similarity=0.367 Sum_probs=165.2
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence 4677889999999999999764 578899998754321 233457889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++|+|.+.+.... ...|.||||+||+++.++.++++|||.++.........
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 9999999988764311 01133999999999999999999999998765433333
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|++.|+||| ++.++||||||+++|||++|+.||...... .... . .......+.... ...
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~~~~-~---~~~~~~~~~~~~---~~~ 226 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK----NLIL-K---VCQGSYKPLPSH---YSY 226 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH----HHHH-H---HhcCCCCCCCcc---cCH
Confidence 4467899999999 467899999999999999999998632210 0110 1 101111111111 112
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
.+.+++.+||+.+|++|||+.||+.+
T Consensus 227 ~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 227 ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 45678889999999999999999875
No 176
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=2.3e-30 Score=264.87 Aligned_cols=233 Identities=21% Similarity=0.248 Sum_probs=162.8
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|... ++..+|+|++...... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 4677889999999999999864 5788999987643221 122356889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc---------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 501 EYLKRGSLATNLSNDA---------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~---------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||++ |+|.+++.... ...|.||||+||+++.++.+||+|||+++........
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence 9998 67776654311 0113399999999999999999999999865433322
Q ss_pred cccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhccc--cCC
Q 042735 554 WSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLDEM--LDP 614 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~~~--~~~ 614 (667)
.....|++.|+|||+ +.++|||||||++|||+||+.|+............... ..... ..+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 334567899999993 45799999999999999999997532110000000000 00000 000
Q ss_pred CCCCCCCc-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 615 RLPPPSPD-----VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 615 ~~~~~~~~-----~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+..... ......++.+++.+||+.||++|||+.+|+.+.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00000000 00011245678889999999999999999988664
No 177
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=1.5e-29 Score=254.74 Aligned_cols=215 Identities=25% Similarity=0.397 Sum_probs=156.1
Q ss_pred eeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|.+. .+..+|+|...... .....+.|.+|+.++++++||||++++|++. .+..++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 3899999999999763 34468999876432 1233467999999999999999999999885 457899999999
Q ss_pred CCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc---cc
Q 042735 505 RGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW---SA 556 (667)
Q Consensus 505 ~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~---~~ 556 (667)
+|+|.+.+..... ..|.||||+||+++.++.+||+|||+++......... +.
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 9999988753211 1133999999999999999999999998654432211 11
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..+++.|+||| ++.++|||||||++||+++ |+.||..... .... ..+.....+..+... ..+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~-~~~~~~~~~~~~~~~------~~~ 226 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG----PEVM-SFIEQGKRLDCPAEC------PPE 226 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH----HHHH-HHHHCCCCCCCCCCC------CHH
Confidence 23457899999 3568999999999999996 9999753221 1111 111111111112111 235
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+.+++.+||+.+|++||++.+|.+.+..
T Consensus 227 l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 227 MYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 6678889999999999999999998864
No 178
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=5.3e-30 Score=264.35 Aligned_cols=237 Identities=18% Similarity=0.258 Sum_probs=167.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|... ++..||+|.+...... .....+.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 357888899999999999999764 5788999987643221 123457789999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||++ ++|.+.+.... ...|.||||+||+++.++.+||+|||+++........
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 999998 58877664321 1123499999999999999999999999865433333
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC---------CCh--hhhhh--hhccccC
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL---------PSP--SVINM--RLDEMLD 613 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~---------~~~--~~~~~--~~~~~~~ 613 (667)
.....+++.|+||| ++.++|||||||++|||+||+.||....... ..+ ..... ...+...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 33456789999999 3457999999999999999999986322100 000 00000 0000000
Q ss_pred CCCCCCCCch-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 614 PRLPPPSPDV-----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 614 ~~~~~~~~~~-----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+...... ......+.+++.+|++.||.+|||++|++++.||...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0011000000 0011245678899999999999999999999998643
No 179
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=8.2e-30 Score=261.04 Aligned_cols=234 Identities=23% Similarity=0.296 Sum_probs=168.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~ 497 (667)
++|+..+.||.|++|.||+|... ++..+|+|.+..... ......+.+|++++++++||||+++++++.+. +..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 36788889999999999999874 578899998764322 13356799999999999999999999998654 4689
Q ss_pred EEEEecCCCChHHHhccc----c------------------------CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSND----A------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~----~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+.+... . ...|.|++|+||+++.++.+||+|||++.....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999997765321 0 112339999999999999999999999876543
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. .....++..|+||| ++.++||||+||++|||+||+.|+......................+.++......
T Consensus 158 ~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd06621 158 SL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG 235 (287)
T ss_pred cc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC
Confidence 22 12356788999999 46689999999999999999999864422101111111111111111111111100
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
......+.+++.+||+.+|++|||+.||+++.|+..
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred CchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 112335778999999999999999999999998854
No 180
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=6.4e-30 Score=262.92 Aligned_cols=225 Identities=22% Similarity=0.392 Sum_probs=161.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC---------------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS---------------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVK 485 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~---------------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 485 (667)
++|+..+.||+|+||.||+|+... ...+|+|++..... ......|.+|++++++++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT---KTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCcCe
Confidence 468888899999999999987532 22489998764322 223457999999999999999999
Q ss_pred EEEEEEeCCceEEEEEecCCCChHHHhcccc------------------------------------CCcccccccCCee
Q 042735 486 FYGFCSHARHSILIYEYLKRGSLATNLSNDA------------------------------------AAEELDISSKNVL 529 (667)
Q Consensus 486 ~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------------------------------~~~~~dlk~~NiL 529 (667)
+++++...+..++||||+++|+|.+++.... ...|.||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999988774321 0113399999999
Q ss_pred ecCCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh--CCCCCCCCccCCC
Q 042735 530 LDLEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK--GKHPRGFVSSILP 599 (667)
Q Consensus 530 ld~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt--G~~p~~~~~~~~~ 599 (667)
++.++.+||+|||+++....... ......++..|+||| ++.++|||||||++|||+| |..||.....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--- 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--- 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence 99999999999999986543221 112234577899999 3678999999999999998 5556543221
Q ss_pred ChhhhhhhhccccCC----CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 600 SPSVINMRLDEMLDP----RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 600 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
....... .+..+. ......+. ....+.+++.+||+.+|++||+|.+|++.|.
T Consensus 239 -~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 -EQVIENT-GEFFRNQGRQIYLSQTPL---CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -HHHHHHH-HHhhhhccccccCCCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0110000 000000 00000111 1235778999999999999999999998875
No 181
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=1.3e-29 Score=255.51 Aligned_cols=219 Identities=23% Similarity=0.407 Sum_probs=164.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|...++..+|+|.+..... ..+.|.+|+.++++++||||+++++++. .+..+++|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 46788899999999999999988888999998864322 2356889999999999999999999874 46789999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.++|+|||+++....... .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 99999999987753211 11239999999999999999999999987653221 1
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+||| ++.++|||||||++||++| |+.||..... ...... .........+.. .
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~~~------~ 228 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQN-LERGYRMPRPDN------C 228 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh----HHHHHH-HHcCCCCCCCCC------C
Confidence 22334677899999 3568999999999999999 9999853221 111111 111111111111 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
..++.+++.+||+.+|++|||++++...|.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 229 PEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 225778888999999999999999998775
No 182
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.7e-29 Score=256.62 Aligned_cols=222 Identities=23% Similarity=0.401 Sum_probs=161.6
Q ss_pred CcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc---
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH--- 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~--- 495 (667)
|...+.||+|+||.||+|.... +..+|+|++...... ......+.+|++.++.++||||++++|++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT--YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 4566789999999999997642 367999988653222 2334679999999999999999999999876554
Q ss_pred ---eEEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEeccc
Q 042735 496 ---SILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 496 ---~~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
.++||||+++|+|...+.... ...|.||||+||++++++.+||+|||
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcc
Confidence 799999999999987763211 01234999999999999999999999
Q ss_pred ccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccC
Q 042735 543 IAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 543 la~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 613 (667)
+++........ .....++..|+||| ++.++|||||||++|||++ |..||..... ....... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----~~~~~~~-~~~~~ 233 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----HEIYDYL-RHGNR 233 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH-HcCCC
Confidence 99876433221 12234567899999 4568999999999999999 8888753221 1111111 11111
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+..+. ....++.+++.+||+.+|++|||+.|+++.+..
T Consensus 234 ~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 234 LKQPE------DCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred CCCCc------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11111 122357788889999999999999999998865
No 183
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=1.9e-29 Score=257.87 Aligned_cols=230 Identities=25% Similarity=0.357 Sum_probs=162.3
Q ss_pred cCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cce
Q 042735 424 DAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHS 496 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~ 496 (667)
...+.||+|+||+||++.+ .++..+|+|.+..... ....+.|.+|++++++++||||+++++++... ...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 6678899999999988653 3567899998765322 12345788999999999999999999998764 357
Q ss_pred EEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 84 ~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 163 (283)
T ss_pred EEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence 899999999999887654321 123499999999999999999999999876533221
Q ss_pred ---cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----CCh-hhhhhhhccccCCCCCC
Q 042735 554 ---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----PSP-SVINMRLDEMLDPRLPP 618 (667)
Q Consensus 554 ---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~ 618 (667)
.....++..|+||| ++.++|||||||++|||+||+.|+....... ... ...........+.....
T Consensus 164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd05080 164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL 243 (283)
T ss_pred hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC
Confidence 12234567799999 4678999999999999999999975321100 000 00000011111111111
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+.+. .....+.+++.+||+.+|++|||+++|++.+...
T Consensus 244 ~~~~--~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 244 PCPK--NCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCC--CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 1111 1223577889999999999999999999988754
No 184
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=4.9e-30 Score=262.31 Aligned_cols=230 Identities=19% Similarity=0.266 Sum_probs=169.1
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.. .+++.+|||++...... .....+.+.+|+.++++++|+||+++++.+.+.+..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 56678899999999999976 45789999987643221 12223457889999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|+++|+|.+.+.... . ..|.||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIK 159 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-ccc
Confidence 999999988764211 0 1133999999999999999999999997654322 223
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...||+.|+||| ++.++|||||||++|||++|+.||......... ....... .......+... ...
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~-~~~~~~~~~~~------~~~ 231 (285)
T cd05630 160 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLV-KEVQEEYSEKF------SPD 231 (285)
T ss_pred CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhh-hhhhhhcCccC------CHH
Confidence 357999999999 467899999999999999999998632211000 0000000 00011111111 124
Q ss_pred HHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhh
Q 042735 630 IMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYF 662 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~ 662 (667)
+.+++.+||+.+|++||| ++|++++.|+....+
T Consensus 232 ~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05630 232 ARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF 269 (285)
T ss_pred HHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence 567888999999999999 999999999976544
No 185
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=8.3e-30 Score=259.56 Aligned_cols=226 Identities=27% Similarity=0.425 Sum_probs=171.2
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC---CCCeeEEEEEEEeCCceE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR---HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~g~~~~~~~~~ 497 (667)
.|+..+.||+|+||.||+|.. .++..+|+|.+..... ....+++.+|++++++++ |||++++++++.+....+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 366678899999999999986 5688899998764322 123456889999999997 999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 498 LIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
+||||+++++|.+.+..... ..|.||+|+||+++.++.+||+|||++..........
T Consensus 79 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred EEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 99999999999887754321 1134999999999999999999999998766544334
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....|+..|+|||+ +.++|||||||++|||++|+.||........ .. .......+.++.. ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----~~-~~~~~~~~~~~~~-----~~~ 228 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA----MM-LIPKSKPPRLEDN-----GYS 228 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh----hh-ccccCCCCCCCcc-----cCC
Confidence 45679999999993 5689999999999999999999863321100 00 0001011111111 122
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.+|++||++.|++++.|+...
T Consensus 229 ~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 229 KLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 357788899999999999999999999888643
No 186
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=8.2e-30 Score=263.05 Aligned_cols=224 Identities=24% Similarity=0.355 Sum_probs=162.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-Cc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCc
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARH 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~ 495 (667)
+++|+..+.||+|+||.||+|.... +. .+|+|++..... ....+.|.+|++++.++ +||||+++++++.+.+.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~ 82 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 82 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC---HHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence 4678888999999999999998643 43 357777653221 23345788999999999 89999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeecCCCc
Q 042735 496 SILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLDLEHK 535 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld~~~~ 535 (667)
.++||||+++|+|.+++.... ...|.||||+|||++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc
Confidence 999999999999998875321 0113399999999999999
Q ss_pred eEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhh
Q 042735 536 AHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 608 (667)
+||+|||+++....... .....++..|+||| ++.++|||||||++|||+| |..||..... ...... .
T Consensus 163 ~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~-~ 236 (303)
T cd05088 163 AKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEK-L 236 (303)
T ss_pred EEeCccccCcccchhhh-cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh----HHHHHH-H
Confidence 99999999974321111 11223467899999 4678999999999999998 9999753221 111111 1
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
........+.. ....+.+++.+||+.+|++||+++++++++...
T Consensus 237 ~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 237 PQGYRLEKPLN------CDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred hcCCcCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01001111111 122467888999999999999999999987654
No 187
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=9.7e-30 Score=255.88 Aligned_cols=222 Identities=21% Similarity=0.339 Sum_probs=169.0
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||.++. .++..+++|++...... ....+.+.+|++++++++||||+++++++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 467788999999999999975 55788999987643222 234567889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMA 158 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccc
Confidence 99999999988754310 1133999999999999999999999998765444334
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|++.|+|||+ +.++||||||+++|||++|+.|+..... .... ..+.....++... ....
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~----~~~~~~~~~~~~~---~~~~ 227 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP----LNLV----VKIVQGNYTPVVS---VYSS 227 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH----HHHH----HHHHcCCCCCCcc---ccCH
Confidence 45678999999993 5689999999999999999999753211 1111 1111111111111 1123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.+.+++.+||..+|++||++.|++++++
T Consensus 228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 228 ELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 4667888999999999999999998765
No 188
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.2e-29 Score=257.17 Aligned_cols=223 Identities=24% Similarity=0.457 Sum_probs=164.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-C---ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-K---EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~---~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|.... + ..+|+|++..... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 578888999999999999998643 3 2689998764321 23345789999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.|+||+||+++.++.+|++|||+++......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 999999999999888754211 1133999999999999999999999998664322
Q ss_pred CCc-c--cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SNW-S--ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~~-~--~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
... + ....++.|+||| ++.++|||||||++|||+| |+.||..... ...... +... ...+.. .
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----~~~~~~-i~~~--~~~~~~-~ 233 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HEVMKA-INDG--FRLPAP-M 233 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH----HHHHHH-HhcC--CCCCCC-C
Confidence 111 1 122345799999 3568999999999999998 9999753221 111111 1110 011111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+.+++.+||+.+|++||++++|++.+..
T Consensus 234 ---~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 234 ---DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred ---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 122356789999999999999999999998864
No 189
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=2.9e-30 Score=261.47 Aligned_cols=225 Identities=23% Similarity=0.346 Sum_probs=164.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 4566778899999999999976 457889999875432 12234578899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||++...........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 99999999988764321 112449999999999999999999999976543332234
Q ss_pred cccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 556 ALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 556 ~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
...||+.|+|||+ +.++|||||||++|||++|+.|+...... .............+.... ... .
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~---~ 237 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM---RALFLMTKSNFQPPKLKD-KMK---W 237 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch---hhHHhhhccCCCCCcccc-cCC---C
Confidence 4579999999994 34799999999999999999997422210 000000000000111110 001 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+++.+||+.+|++|||+++|+++.|
T Consensus 238 ~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 238 SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 124567888999999999999999988643
No 190
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=9.2e-30 Score=267.29 Aligned_cols=225 Identities=24% Similarity=0.411 Sum_probs=163.0
Q ss_pred cCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++.++ +|||||++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 4688899999999999999963 3467899999864322 22345688999999999 589999999988654
Q ss_pred -CceEEEEEecCCCChHHHhcccc--------------------------------------------------------
Q 042735 494 -RHSILIYEYLKRGSLATNLSNDA-------------------------------------------------------- 516 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 516 (667)
...++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 46789999999999988774311
Q ss_pred -----------------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--Ccccccc
Q 042735 517 -----------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--NWSALVG 559 (667)
Q Consensus 517 -----------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--~~~~~~G 559 (667)
...|.||||+||+++.++.+||+|||+++....... ......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 011339999999999999999999999986533221 1122345
Q ss_pred cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 560 TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 560 t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
++.|+||| |+.++|||||||++|||++ |..||..... ..... ...........+... ...+.+
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~-~~~~~~~~~~~~~~~------~~~~~~ 313 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEFC-RRLKEGTRMRAPDYT------TPEMYQ 313 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc---cHHHH-HHHhccCCCCCCCCC------CHHHHH
Confidence 67899999 4678999999999999997 8888753221 01111 111111111111111 124678
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
++.+||+.+|++|||+.||+++|...
T Consensus 314 ~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 314 TMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHH
Confidence 88899999999999999999998764
No 191
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=6.9e-30 Score=270.18 Aligned_cols=236 Identities=21% Similarity=0.318 Sum_probs=165.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
.++|...+.||+|+||.||+|.. .++..+|||++...... ....+.+.+|+.++++++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN--QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc--hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 47899999999999999999976 45788999998654322 233456889999999999999999999986543
Q ss_pred --ceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 --HSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 --~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..++||||++++ +.+.+... ....|.||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 98 FQDVYLVMELMDAN-LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred cceeEEEEeCCCcC-HHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 479999999865 43332211 12235599999999999999999999999864322
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh---hhcc
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM---RLDE 610 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~---~~~~ 610 (667)
.......||+.|+||| |+.++|||||||++|||+||+.||....... +.....+. ....
T Consensus 177 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 177 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred -ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 2234467899999999 5678999999999999999999986332100 00000000 0000
Q ss_pred cc--CCCCCC--------------CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 611 ML--DPRLPP--------------PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 611 ~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.. .+..+. ...........+.+++.+||+.||++|||+.|++++.|+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 00 000000 00000001234678889999999999999999999998864
No 192
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=4.9e-30 Score=277.32 Aligned_cols=230 Identities=20% Similarity=0.272 Sum_probs=158.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------ 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------ 493 (667)
.+|...+.||+|+||.||+|.. ..++.||||++.... ....+|+.++++++|||||++++++...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 5688899999999999999986 457889999875321 1245799999999999999999987532
Q ss_pred --CceEEEEEecCCCChHHHhcc----c------------------------cCCcccccccCCeeecCCC-ceEEeccc
Q 042735 494 --RHSILIYEYLKRGSLATNLSN----D------------------------AAAEELDISSKNVLLDLEH-KAHVSDFG 542 (667)
Q Consensus 494 --~~~~lv~ey~~~g~L~~~l~~----~------------------------~~~~~~dlk~~NiLld~~~-~~kl~DFG 542 (667)
...++||||+++ ++.+.+.. . ....|.||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 246789999996 55444321 0 1122459999999999664 79999999
Q ss_pred ccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh---------h
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN---------M 606 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~---------~ 606 (667)
+|+....... .....||+.|+||| |+.++|||||||++|||+||++||.............. .
T Consensus 217 la~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 217 SAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred cchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 9987654322 23457899999999 45689999999999999999999863221100000000 0
Q ss_pred --hhccccCCCCCCCCCc-hH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 --RLDEMLDPRLPPPSPD-VQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 --~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......+...+...+. .. ....++.+++.+||+.+|.+|||+.|++++.||...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 0000000011110000 00 012356788999999999999999999999998643
No 193
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=9.7e-30 Score=259.95 Aligned_cols=222 Identities=21% Similarity=0.338 Sum_probs=162.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||+|...+ +..+|+|++..... ....+.|.+|+.++++++|||||++++++.+..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 345667789999999999997532 46799999864321 223456889999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeecCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLDLEH 534 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld~~~ 534 (667)
..++++||+++++|.+++.... ...|.||||+||++++++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 9999999999999988763210 011339999999999999
Q ss_pred ceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
.+||+|||+++....... ......+++.|+||| ++.++|||||||++|||+| |..|+..... ...
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~-- 235 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDV-- 235 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH----HHH--
Confidence 999999999986543221 122345678999999 4668999999999999998 7778653211 111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+....+.... ....+.+++.+||+.+|++||+++||++.|.
T Consensus 236 --~~~i~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 236 --IEMIRNRQVLPCPDD---CPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred --HHHHHcCCcCCCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 111112111111111 1224667888999999999999999999874
No 194
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=1.5e-29 Score=257.74 Aligned_cols=222 Identities=21% Similarity=0.375 Sum_probs=165.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||+|.... +..+|+|.+.... .......|.+|+.++.+++||||++++|++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 577888999999999999997642 3579999875432 2233457899999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC----------------------------------CcccccccCCeeecCCCceEEec
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA----------------------------------AEELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~----------------------------------~~~~dlk~~NiLld~~~~~kl~D 540 (667)
..++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 99999999999999988743110 11239999999999999999999
Q ss_pred ccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
||+++....... ......+|..|+||| ++.++|||||||++||++| |+.||..... ....... ...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~~-~~~ 237 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----EEVLKFV-IDG 237 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH----HHHHHHH-hcC
Confidence 999986543321 123345788999999 4678999999999999998 8888753221 1111111 110
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
..+..+... ...+.+++.+||+.+|++|||+.|+++.+.
T Consensus 238 ~~~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 GHLDLPENC------PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCC------CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 011112111 235678889999999999999999998864
No 195
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=2.4e-29 Score=255.47 Aligned_cols=221 Identities=23% Similarity=0.405 Sum_probs=158.5
Q ss_pred cCcceeecccCeEEEEEEeCCCc---eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------C
Q 042735 424 DAKYCIGSGRHGSVYRAELPSKE---FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------R 494 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------~ 494 (667)
...+.||+|+||.||+|....+. .+|+|.++..... ....+.|.+|++++++++||||+++++++... .
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT--RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 45678999999999999875533 5899987653322 23356789999999999999999999988542 2
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
..+++|||+++|+|.+++.... ...|.||||+|||+++++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 4689999999999987763211 0113499999999999999999999999
Q ss_pred ccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 545 KFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 545 ~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
+........ .....+++.|+||| ++.++|||||||++|||++ |+.||..... ...... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~----~~~~~ 231 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----SEIYDY----LRQGN 231 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH----HHcCC
Confidence 876433211 12234667899999 3668999999999999999 7888753211 111111 11111
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+. ....+.+++.+||+.+|++|||++++++++..
T Consensus 232 ~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 232 RLKQPPD---CLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1111111 12246788899999999999999999998764
No 196
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=2.1e-29 Score=255.22 Aligned_cols=223 Identities=24% Similarity=0.435 Sum_probs=164.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC-C---CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-S---KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~---~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
.+|...+.||+|+||.||+|... + +..+|+|.+..... ....+.|.+|+.++.+++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 46778899999999999999753 2 33689998764322 23346789999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999999999988754311 1133999999999999999999999998765432
Q ss_pred CCc---ccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SNW---SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~~---~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
... ....++..|+|||+ +.++|||||||++||+++ |+.||..... ..... ...... ..+.+ .
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~----~~~~~-~~~~~~--~~~~~-~ 232 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN----QDVIK-AIEEGY--RLPAP-M 232 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH----HHHHH-HHhCCC--cCCCC-C
Confidence 211 11234568999993 568999999999999887 9999753221 01111 111111 11111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+.+++.+||+.+|++||+|.++++.+..
T Consensus 233 ---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 233 ---DCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred ---CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 112346688889999999999999999998764
No 197
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=5.7e-30 Score=262.11 Aligned_cols=227 Identities=22% Similarity=0.337 Sum_probs=170.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... .+..+|+|.+..... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD---ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 35777889999999999999875 688899998764321 22345789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++++|..++.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999987765420 1123499999999999999999999999765322
Q ss_pred CCcccccccccccCCCC------------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 552 SNWSALVGTYRYVAPDY------------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
......|++.|+|||+ +.++|||||||++|||+||+.||..... ..... ......+...+..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~-~~~~~~~~~~~~~ 230 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY----ANIFA-QLSAIVDGDPPTL 230 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch----hhHHH-HHHHHhhcCCCCC
Confidence 2234568899999993 4579999999999999999999853221 11111 1111111111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+. ....+.+++.+||+.+|++||++++++.+.|+...
T Consensus 231 ~~~---~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 231 PSG---YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred Ccc---cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 111 12345678889999999999999999999987654
No 198
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=4.8e-30 Score=262.06 Aligned_cols=231 Identities=23% Similarity=0.387 Sum_probs=169.4
Q ss_pred CHHHHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEE
Q 042735 412 DYVEIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGF 489 (667)
Q Consensus 412 ~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~ 489 (667)
++.++..+.+.|+..+.||+|+||.||+|.. ..+..+|+|.+... .....++..|+.++.++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 4455556678899999999999999999986 45788999987532 12335688899999998 69999999999
Q ss_pred EEe------CCceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceE
Q 042735 490 CSH------ARHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 490 ~~~------~~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~k 537 (667)
+.. .+..+++|||+++|+|.+.+..... ..|.|+||+||+++.++.+|
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 853 4578999999999999887753210 11239999999999999999
Q ss_pred EecccccccccCCCCCcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh
Q 042735 538 VSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 538 l~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 606 (667)
|+|||+++.............|++.|+|||. +.++|||||||++|||+||+.||...... ....
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~---~~~~-- 236 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM---RALF-- 236 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH---hhhh--
Confidence 9999999865433333345679999999993 34799999999999999999997532210 0000
Q ss_pred hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 607 RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.......+.... ......+.+++.+||+.+|.+|||+.|++++.|+
T Consensus 237 ~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 237 LIPRNPPPKLKS-----KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hHhhCCCCCCcc-----cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000000111110 1122357788889999999999999999987664
No 199
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=1.7e-29 Score=259.46 Aligned_cols=225 Identities=23% Similarity=0.390 Sum_probs=165.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~ 492 (667)
.++|+..+.||+|+||.||+|.... ...+|+|.+..... ......+.+|++++.++ +||||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3567888899999999999997632 35789998764322 22345688999999999 79999999999999
Q ss_pred CCceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeecC
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLDL 532 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld~ 532 (667)
.+..+++|||+++|+|.+++.... ...|.||||+||+++.
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 999999999999999998875311 0113399999999999
Q ss_pred CCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhh
Q 042735 533 EHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSV 603 (667)
Q Consensus 533 ~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 603 (667)
++.+||+|||+++........ .....++..|+||| ++.++|||||||++|||++ |..|+..... ...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~ 243 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----EEL 243 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----HHH
Confidence 999999999999876543211 12233567899999 4668999999999999998 8888753211 111
Q ss_pred hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 604 INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.... .....+..+. .....+.+++.+||+.+|++|||+.|+++.+...
T Consensus 244 ~~~~-~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 244 FKLL-KEGYRMEKPQ------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHH-HcCCcCCCCC------CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1111 1111111111 1123567889999999999999999999998764
No 200
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=1.7e-29 Score=254.69 Aligned_cols=220 Identities=24% Similarity=0.444 Sum_probs=163.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|...++..+|+|.+..... ..+.|.+|+.++++++|||++++++++. ....+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence 46778889999999999999988888899998865322 2346899999999999999999999885 45688999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 99999999988753210 113499999999999999999999999875433211
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+||| ++.++|||||||++|||++ |+.||..... ..... .+ ......+.+. ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~----~~-~~~~~~~~~~--~~ 228 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN----REVLE----QV-ERGYRMPCPQ--DC 228 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH----HHHHH----HH-HcCCCCCCCC--cC
Confidence 11234567899999 3568999999999999999 8888753221 11111 11 1111111111 12
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++|||++++.+.|..
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2357788999999999999999999987753
No 201
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=4.7e-30 Score=259.50 Aligned_cols=228 Identities=23% Similarity=0.358 Sum_probs=170.3
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... +++.+|+|.+..... ....+.+.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 5777788999999999999875 578899998765432 134567899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccc--------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSND--------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~--------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++++|.+.+... ....|.||||+||+++.++.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 156 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-- 156 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence 999999998877532 1112349999999999999999999999976543221
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|+..|+||| ++.++|||||||++|||++|+.|+......... ... ..........+..... ....
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~--~~~~ 231 (265)
T cd06605 157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG--IFE-LLQYIVNEPPPRLPSG--KFSP 231 (265)
T ss_pred hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc--HHH-HHHHHhcCCCCCCChh--hcCH
Confidence 1267889999999 467899999999999999999997533211010 000 0111111111111111 0223
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+.+++.+||..+|++|||+.|++.+.||..
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 4678888999999999999999999999854
No 202
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=2.1e-29 Score=255.11 Aligned_cols=224 Identities=29% Similarity=0.471 Sum_probs=166.2
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCch-----HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQ-----IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
|.....||+|+||.||+|.. .++..+|+|.+........ ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 55678899999999999976 4578899998765432211 11235688999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
++||||+++++|.+++..... ..|.||||+||+++.++.+||+|||+++.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL 161 (267)
T ss_pred EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence 999999999999887754211 12349999999999999999999999987652211
Q ss_pred ------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 553 ------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 553 ------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
......|+..|+||| ++.++|||||||++|||+||+.||...... .... .......+..+...
T Consensus 162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~--~~~~~~~~~~~~~~ 236 (267)
T cd06628 162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL---QAIF--KIGENASPEIPSNI 236 (267)
T ss_pred cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH---HHHH--HHhccCCCcCCccc
Confidence 112356889999999 356899999999999999999998632211 0010 11111222222221
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|.+||++.||+++.|+
T Consensus 237 ------~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 237 ------SSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ------CHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 1245678889999999999999999987653
No 203
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=2.5e-29 Score=259.23 Aligned_cols=224 Identities=24% Similarity=0.405 Sum_probs=164.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|...+.||+|+||.||+|... .+..+|||.+..... ....+.+.+|+++++++ +||||+++++++...
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 57888999999999999999641 234699998764322 22345789999999999 799999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
+..++||||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++..
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 999999999999999988754211 112399999999999999999999999865
Q ss_pred cCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 548 KPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 548 ~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
...... .....++..|+||| ++.++|||||||++|||+| |+.|+..... ..... ..+......
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~---~~~~~-----~~~~~~~~~ 263 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV---DSKFY-----KLIKEGYRM 263 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc---hHHHH-----HHHHcCCcC
Confidence 433211 12234678899999 3568999999999999998 9998753211 00000 111111111
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+. .....+.+++.+||+.+|++|||+.|+++.+..
T Consensus 264 ~~~~--~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 264 AQPE--HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCC--CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 1111 011256788899999999999999999998764
No 204
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.5e-29 Score=256.09 Aligned_cols=226 Identities=22% Similarity=0.376 Sum_probs=163.1
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCceE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHSI 497 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~~ 497 (667)
+|+..+.||+|+||.||+|.. .++..+|+|++...... ...+..+.+.+|+.++++++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 688889999999999999976 45788999987643221 122334568899999999999999999999875 35678
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC--
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-- 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-- 551 (667)
++|||+++++|.+.+..... ..|.|+||+||+++.++.+||+|||+++......
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 99999999999887753211 1234999999999999999999999998654321
Q ss_pred -CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 552 -SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 552 -~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.......|+..|+|||+ +.++|||||||++|||+||+.||..... ...... .......+..+... .
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~-~~~~~~~~~~~~~~---~ 235 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFK-IATQPTNPQLPSHI---S 235 (266)
T ss_pred CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHH-HhcCCCCCCCchhc---C
Confidence 11233568999999993 5689999999999999999999853211 111111 11111112222111 1
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. .+.+++ +||..+|++||+|+||+++.+|.
T Consensus 236 ~---~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 236 E---HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred H---HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 1 233343 78899999999999999988763
No 205
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=2.9e-29 Score=252.39 Aligned_cols=217 Identities=26% Similarity=0.431 Sum_probs=164.9
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|... ++.+|+|++..... ..+++.+|+.++++++||||+++++++.+....++||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 47788899999999999999875 67799999865321 3567999999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999998875432 11234999999999999999999999998763222
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....++..|+|||+ +.++||||||+++||+++ |+.||..... ..... ..........+.. ..
T Consensus 157 ~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~------~~ 225 (256)
T cd05039 157 DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVP-HVEKGYRMEAPEG------CP 225 (256)
T ss_pred ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH----HHHHH-HHhcCCCCCCccC------CC
Confidence 12345678999994 457999999999999997 9988753211 11111 1111111111111 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.+++.+||..+|++|||+.|++++|..
T Consensus 226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 226 PEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 356788889999999999999999998864
No 206
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1.9e-29 Score=254.63 Aligned_cols=220 Identities=23% Similarity=0.400 Sum_probs=162.7
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.+|...+.||+|+||.||+|...++..+|+|++..... ..+.|.+|++++++++||||+++++++. ....++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 45788889999999999999887777799998864221 2346899999999999999999999875 45678999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+||+|||.++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 99999999988764210 113399999999999999999999999865433221
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+|||+ +.++|||||||++|||+| |+.||..... ...... .........+ . ..
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~----~~~~~~-~~~~~~~~~~---~---~~ 228 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQ-VERGYRMPCP---P---EC 228 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh----HHHHHH-HhcCCCCCCc---c---cc
Confidence 122346678999993 568999999999999999 7878753211 111111 0010011111 1 12
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++||+++++.+.+..
T Consensus 229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 229 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 3356789999999999999999999988753
No 207
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=9.2e-30 Score=261.39 Aligned_cols=228 Identities=23% Similarity=0.374 Sum_probs=172.1
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 5788889999999999999975 467789999875321 12345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
+||+++|+|.+++..... ..|.|+||+||+++.++.+||+|||++............
T Consensus 95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (293)
T cd06647 95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (293)
T ss_pred EecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence 999999999987754321 113499999999999999999999998866544433444
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|++.|+||| ++.++|||||||++||+++|+.||........ ... ........ ..........+
T Consensus 175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---~~~----~~~~~~~~--~~~~~~~~~~l 245 (293)
T cd06647 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYL----IATNGTPE--LQNPEKLSAIF 245 (293)
T ss_pred ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---eee----hhcCCCCC--CCCccccCHHH
Confidence 57899999999 35689999999999999999999863321100 000 00011100 00111112346
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+++.+||+.+|++||++.+++.+.||....
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 6788899999999999999999999886543
No 208
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.2e-30 Score=263.68 Aligned_cols=231 Identities=23% Similarity=0.345 Sum_probs=170.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|++.... .....+.+.+|+++++.++||||+++++++......++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 56777789999999999999864 57889999875432 123356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--~~ 159 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--IA 159 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--cc
Confidence 99999999987664321 1224499999999999999999999998754322 12
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccC----CCChhhhhhhhccccCCCCCCCCCchH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSI----LPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
....||..|+|||+ +.++|||||||++||++||+.||...... ........ ....+.....+.....
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 236 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPPPRLPSS-- 236 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhhccCCCCCch--
Confidence 34579999999993 56899999999999999999998632210 00000001 1111111111111111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.....+.+++.+||+.+|++|||+.|+++++++..
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 12235678888999999999999999999988754
No 209
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=1.9e-29 Score=256.86 Aligned_cols=223 Identities=23% Similarity=0.365 Sum_probs=162.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|...+.||+|+||.||+|.... +..+|+|.+..... ......|.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 4568888999999999999998743 45688887754321 22345799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC-------------------------------CcccccccCCeeecCCC---ceEEe
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA-------------------------------AEELDISSKNVLLDLEH---KAHVS 539 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~-------------------------------~~~~dlk~~NiLld~~~---~~kl~ 539 (667)
...++||||+++|+|.+++..... ..|.||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999988754311 11239999999998655 59999
Q ss_pred cccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhcc
Q 042735 540 DFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDE 610 (667)
Q Consensus 540 DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 610 (667)
|||+++........ .....++..|+||| ++.++|||||||++|||+| |+.||..... ....... ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~----~~~~~~~-~~ 236 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN----QEVMEFV-TG 236 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH-Hc
Confidence 99999875322111 11223356899999 5678999999999999997 9988753221 1111111 01
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+..+.. ....+.+++.+||+.+|++|||+++|++++.
T Consensus 237 ~~~~~~~~~------~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGRLDPPKG------CPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCcCCCCCC------CCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 001111111 1235678889999999999999999999875
No 210
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=2.4e-30 Score=265.55 Aligned_cols=223 Identities=24% Similarity=0.355 Sum_probs=167.7
Q ss_pred cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 426 KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
...||+|+||.||+|.. .++..+|||++.... ....+.+.+|+.++++++||||+++++.+..++..++||||++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 35689999999999976 457889999875421 2334568899999999999999999999999999999999999
Q ss_pred CCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 505 RGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 505 ~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
+++|.+++..... ..|.||||+||+++.++.+||+|||++..............|+.
T Consensus 103 ~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 103 GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 9999887644321 11349999999999999999999999986544333334467899
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| ++.++|||||||++|||++|+.||..... .... ........+..+... .....+.+++.
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~-~~~~~~~~~~~~~~~----~~~~~~~~li~ 253 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----LQAM-RRIRDNLPPRVKDSH----KVSSVLRGFLD 253 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHHHhcCCCcccccc----ccCHHHHHHHH
Confidence 999999 46789999999999999999999753221 0110 111111222222111 11224567788
Q ss_pred hccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 636 SCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 636 ~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+||..+|.+|||++|++++.|+....
T Consensus 254 ~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 254 LMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred HHccCChhHCcCHHHHhhChhhhccC
Confidence 99999999999999999998887443
No 211
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-30 Score=251.98 Aligned_cols=238 Identities=22% Similarity=0.314 Sum_probs=171.3
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----CCc
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-----ARH 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-----~~~ 495 (667)
.|...+.||+|+||.|..|.. .+|+.||||++...... .-..++-.||+++++.++|+|||.+++.+.. -+.
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~--~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN--QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc--hHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 444567899999999999975 66899999998754322 2345678899999999999999999998865 457
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCC-
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD- 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~- 550 (667)
.|+|+|+|+ -+|...+.... ...|.|+||+|++++.+...||+|||+||.....
T Consensus 101 vYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 101 VYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred eEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC
Confidence 899999994 47776665433 1234599999999999999999999999987542
Q ss_pred -CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC---------CCChhhhh------hh
Q 042735 551 -SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI---------LPSPSVIN------MR 607 (667)
Q Consensus 551 -~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~---------~~~~~~~~------~~ 607 (667)
...+|..+.|..|-||| |+.+.||||.|||+.||++|++-|...+.+ ...+.... ..
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 23456678899999998 899999999999999999999866432221 11111100 00
Q ss_pred hccccC--CCCCCCC-C-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 608 LDEMLD--PRLPPPS-P-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 608 ~~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
.+..+. |..+... . -....-...+++..+++..||.+|+|++|.++|.++....-
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 111111 1111100 0 00111234567788999999999999999999999876543
No 212
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=1.8e-29 Score=257.55 Aligned_cols=221 Identities=24% Similarity=0.466 Sum_probs=162.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.++.....||+|+||.||+|... ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 35677889999999999999642 34578888875421 233467999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC---------------------------------------CcccccccCCeeecCCCc
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA---------------------------------------AEELDISSKNVLLDLEHK 535 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~---------------------------------------~~~~dlk~~NiLld~~~~ 535 (667)
..++||||+++|+|.+++..... ..|.||||+||++++++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 99999999999999887753210 012399999999999999
Q ss_pred eEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhh
Q 042735 536 AHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~ 606 (667)
+||+|||+++....... ......+++.|+||| ++.++|||||||++|||+| |+.||..... ......
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~ 236 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN----TEAIEC 236 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH----HHHHHH
Confidence 99999999976533221 112234578899999 4678999999999999999 8888742211 111111
Q ss_pred hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 607 RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
. ........+... ...+.+++.+||+.+|++||+++||.+.+.
T Consensus 237 ~-~~~~~~~~~~~~------~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 I-TQGRELERPRTC------PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred H-HcCccCCCCCCC------CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 0 111111111111 124667888999999999999999998874
No 213
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=2.5e-29 Score=252.87 Aligned_cols=219 Identities=26% Similarity=0.463 Sum_probs=163.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.+|+..+.||+|+||.||+|....+..+|+|++..... ....|.+|++++++++|||++++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 46778889999999999999887778899998764322 2346889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-c
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-W 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-~ 554 (667)
||+++|+|.+++..... ..|.|+||+||+++.++.+||+|||+++........ .
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 99999999888754211 112399999999999999999999999865432111 1
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....++.+|+|||+ +.++|||||||++|||++ |+.|+..... ..... ..........+.. ..
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~------~~ 227 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN----SEVVE-TINAGFRLYKPRL------AS 227 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH----HHHHH-HHhCCCCCCCCCC------CC
Confidence 12335678999993 557999999999999998 8998753211 00011 1111111111111 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..+.+++.+||+.+|++|||++|+++++
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 3577889999999999999999999886
No 214
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=2.5e-29 Score=256.47 Aligned_cols=226 Identities=20% Similarity=0.290 Sum_probs=167.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-A 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~ 493 (667)
.++|...+.||+|+||.||+|.... +..+++|++.... .....+.+.+|+.++++++||||++++|++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 3578888999999999999998755 6778999876432 22345678999999999999999999998876 5
Q ss_pred CceEEEEEecCCCChHHHhccccCC--------------------------------cccccccCCeeecCCCceEEecc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAAA--------------------------------EELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~~--------------------------------~~~dlk~~NiLld~~~~~kl~DF 541 (667)
...++++||+++|+|.+++...... .|.||||+||+++.++.+||+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCC
Confidence 6789999999999999887542110 12399999999999999999999
Q ss_pred cccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhcccc
Q 042735 542 GIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 542 Gla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
|+++.+...... .....++..|+||| ++.++|||||||++||+++ |+.||..... .... .......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~-~~~~~~~ 236 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMA-AYLKDGY 236 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHH-HHHHcCC
Confidence 999865433211 12234677899999 4678999999999999999 9999753221 1111 1111111
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.. ....+.+++.+||+.+|++|||+.|+++.|....
T Consensus 237 ~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 237 RLAQPIN------CPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred CCCCCCc------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111111 1224678889999999999999999999987654
No 215
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=3.7e-30 Score=271.87 Aligned_cols=238 Identities=20% Similarity=0.306 Sum_probs=167.0
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA---- 493 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~---- 493 (667)
..++|...+.||+|+||.||+|.. ..+..+|||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC--hHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 457899999999999999999975 45788999988654322 23345688999999999999999999988653
Q ss_pred --CceEEEEEecCCCChHHHhcc----------------------ccCCcccccccCCeeecCCCceEEecccccccccC
Q 042735 494 --RHSILIYEYLKRGSLATNLSN----------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 494 --~~~~lv~ey~~~g~L~~~l~~----------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
...++||||+++ ++.+.+.. .....|.||||+||+++.++.+||+|||+++....
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 346999999986 45443321 11233569999999999999999999999986543
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhh---hhhc
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVIN---MRLD 609 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~---~~~~ 609 (667)
. .......||+.|+||| |+.++|||||||++|||++|+.||....... +.+.... ....
T Consensus 172 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 172 S-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred c-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 2 2233467999999999 5778999999999999999999986322100 0000000 0000
Q ss_pred cccC----------C------CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 610 EMLD----------P------RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 610 ~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..++ + ..+............+.+++.+|++.||++|||+.|++++.|+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 0000 0 0000000000112356788999999999999999999999988644
No 216
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=4.1e-30 Score=289.55 Aligned_cols=228 Identities=23% Similarity=0.412 Sum_probs=167.3
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCc
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARH 495 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~ 495 (667)
..++|.+.+.||+|+||.||+|... .+..+|+|.+..... .......|.+|+.++.+++|||||++++++.+ ...
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l--~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL--KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 4578999999999999999999864 467788888764322 22345679999999999999999999998865 356
Q ss_pred eEEEEEecCCCChHHHhccc-----------------------------------cCCcccccccCCeeecCC-------
Q 042735 496 SILIYEYLKRGSLATNLSND-----------------------------------AAAEELDISSKNVLLDLE------- 533 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~-----------------------------------~~~~~~dlk~~NiLld~~------- 533 (667)
.|+||||+++|+|.+.+... ....|.||||+|||++.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999998765320 013455999999999643
Q ss_pred ----------CceEEecccccccccCCCCCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCc
Q 042735 534 ----------HKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVS 595 (667)
Q Consensus 534 ----------~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~ 595 (667)
+.+||+|||+++...... ......||+.|+||| |+.++||||||||+|||+||+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 348999999998654322 233467999999999 3568999999999999999999985322
Q ss_pred cCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 596 SILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.. ..... .+.. .+.++.. .....+.+++..||+.+|++||++.|++.+.++..+
T Consensus 248 ~~---~qli~-~lk~--~p~lpi~-----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 248 NF---SQLIS-ELKR--GPDLPIK-----GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cH---HHHHH-HHhc--CCCCCcC-----CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 11 01110 0101 1112111 112346778889999999999999999988777543
No 217
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=2.3e-30 Score=264.90 Aligned_cols=234 Identities=21% Similarity=0.341 Sum_probs=168.1
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... .++.+|+|++....... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK--MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc--hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 5778889999999999999875 57889999876533221 23456889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||++++++........ ...|.|++|+||++++++.+||+|||+++.........+.
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD 159 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence 9999998876553221 1123499999999999999999999999876544433445
Q ss_pred ccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh---------h-------hhhccccC
Q 042735 557 LVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI---------N-------MRLDEMLD 613 (667)
Q Consensus 557 ~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~---------~-------~~~~~~~~ 613 (667)
..|+..|+|||+ +.++|||||||++|||+||++|+............. . ........
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence 678999999993 457999999999999999998875322100000000 0 00000000
Q ss_pred CCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 614 PRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 614 ~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+......+. .......+.+++.+||+.+|++||++.+++++.||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 100000000 00112357788999999999999999999988764
No 218
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=5.4e-30 Score=267.67 Aligned_cols=233 Identities=24% Similarity=0.293 Sum_probs=165.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. +++.+|||++..... ......+.|.+|+.++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM-LKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 46888899999999999999864 578899998753111 1122345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc--C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 500 YEYLKRGSLATNLSNDA--A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
|||+++|+|.+++.... . ..|.||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 99999999998875311 1 11349999999999999999999999976543322 1
Q ss_pred cccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 554 WSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
....+||+.|||||. +.++|||||||++|||++|+.||...... ...............+.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 235 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHKEHFQFPPDVTD 235 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH----HHHHHHHcCCCcccCCCccCC
Confidence 233579999999982 45799999999999999999998532210 000000000000111211111
Q ss_pred hHHHHHHHHHHHHhcc--ccCCCCCCCHHHHHHHHHHhhhh
Q 042735 623 VQGKLISIMEVAFSCL--DVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl--~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
... .+.+++.+|+ ..++..||++++++++.|+....
T Consensus 236 ~~~---~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~ 273 (331)
T cd05597 236 VSE---EAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID 273 (331)
T ss_pred CCH---HHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence 112 3445555655 44445589999999999986544
No 219
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3e-29 Score=259.13 Aligned_cols=226 Identities=24% Similarity=0.369 Sum_probs=165.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC--------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP--------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFC 490 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~ 490 (667)
.++|...+.||+|+||.||+|+.. ++..+|+|....... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc---hHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 356788899999999999999642 234689998764321 23346789999999999 799999999999
Q ss_pred EeCCceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeee
Q 042735 491 SHARHSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLL 530 (667)
Q Consensus 491 ~~~~~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLl 530 (667)
......++||||+++|+|.+++.... ...|.||||+||++
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 99999999999999999998875421 01133999999999
Q ss_pred cCCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCCh
Q 042735 531 DLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSP 601 (667)
Q Consensus 531 d~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~ 601 (667)
+.++.+||+|||+++........ .....+++.|+||| |+.++|||||||++|||+| |..|+..... .
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~ 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----E 246 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH----H
Confidence 99999999999999876433221 22334677899999 4678999999999999999 7777642211 1
Q ss_pred hhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 602 SVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.... ..........+. .....+.+++.+||+.+|++||||.|+++.|....
T Consensus 247 ~~~~-~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 247 ELFK-LLKEGHRMDKPA------NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHH-HHHcCCcCCCCC------CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 1111 111111111111 11235667888999999999999999999987654
No 220
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=3.2e-29 Score=256.79 Aligned_cols=225 Identities=19% Similarity=0.347 Sum_probs=165.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|+..+.||+|+||.||+|..+ .+..+|+|.+.... .......+.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 467888999999999999999643 23479999875432 223345688999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc----------------------------------CCcccccccCCeeecCCCceEEe
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA----------------------------------AAEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~----------------------------------~~~~~dlk~~NiLld~~~~~kl~ 539 (667)
+..++||||+++|+|.+++.... ...|.||||+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999999999998885311 01123999999999999999999
Q ss_pred cccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhcc
Q 042735 540 DFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDE 610 (667)
Q Consensus 540 DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 610 (667)
|||+++........ .....++..|+||| ++.++|||||||++|||++ |+.||..... ..... .
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~----~~~~~----~ 233 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----EQVLK----F 233 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH----H
Confidence 99999865432211 12234577899999 3678999999999999999 7778753221 11111 1
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+...+..... ....+.+++.+||+.+|++|||+.++++.+...
T Consensus 234 ~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 234 VMDGGYLDQPDN---CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHcCCCCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111111111111 123577888999999999999999999887653
No 221
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=4e-29 Score=251.60 Aligned_cols=216 Identities=28% Similarity=0.445 Sum_probs=158.1
Q ss_pred ceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|+||.||+|.+.. +..+|+|.+...... ...+.+.+|++++++++|||||++++++. .+..++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence 368999999999997533 257999987654321 34567999999999999999999999875 5568999999
Q ss_pred cCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc---
Q 042735 503 LKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS--- 555 (667)
Q Consensus 503 ~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~--- 555 (667)
+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++..........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999988864321 11339999999999999999999999987654332211
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...++..|+||| ++.++|||||||++|||+| |+.||..... ...... .........+. . ...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~~---~---~~~ 225 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----AEVIAM-LESGERLPRPE---E---CPQ 225 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----HHHHHH-HHcCCcCCCCC---C---CCH
Confidence 122456899999 4668999999999999998 9999753221 111111 11110101111 1 123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+.+++.+||..+|++||++.++.+.+..
T Consensus 226 ~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 226 EIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 56788899999999999999999998865
No 222
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=2.7e-29 Score=256.85 Aligned_cols=230 Identities=27% Similarity=0.431 Sum_probs=161.4
Q ss_pred cCCcCcceeecccCeEEEEEEeC-----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-- 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-- 493 (667)
.+|...+.||+|+||.||+|.+. ++..+|+|++.... ....+.|.+|++++++++|||||++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35777889999999999999753 46789999876431 23346789999999999999999999987543
Q ss_pred CceEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEeccccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
...++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 468899999999999988754211 1133999999999999999999999998765
Q ss_pred CCCCCc---ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC-----Ch--hhhhhhhcccc
Q 042735 549 PDSSNW---SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP-----SP--SVINMRLDEML 612 (667)
Q Consensus 549 ~~~~~~---~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-----~~--~~~~~~~~~~~ 612 (667)
...... ....++..|+||| ++.++|||||||++|||++|..|+........ .. ........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 433211 1123445699999 45689999999999999999876432111000 00 00000000111
Q ss_pred CCC-CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 613 DPR-LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 613 ~~~-~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
... ..+.... ....+.+++.+||+.+|++||||+||++.|..
T Consensus 240 ~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 240 KNNGRLPAPPG---CPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred hcCCcCCCCCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 111 1111111 12356788889999999999999999998864
No 223
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=2.2e-29 Score=257.96 Aligned_cols=223 Identities=22% Similarity=0.394 Sum_probs=165.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|+..+.||+|+||.||+|... ++..+|+|.+..... ....+.|.+|++++++++||||+++++++.++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 467889999999999999999753 356799998764322 23346799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc----------------------------------------------CCcccccccCC
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA----------------------------------------------AAEELDISSKN 527 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~----------------------------------------------~~~~~dlk~~N 527 (667)
+..++||||+++|+|.+++.... ...|.||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999988875311 01123999999
Q ss_pred eeecCCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCC
Q 042735 528 VLLDLEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSIL 598 (667)
Q Consensus 528 iLld~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~ 598 (667)
|+++.++.+||+|||+++....... ......++..|+||| ++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999986543221 111233567899999 4678999999999999998 8878642211
Q ss_pred CChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 599 PSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
... ...+.+....+.... ...++.+++.+||+.+|++|||+.|+++.|.
T Consensus 239 ---~~~---~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 ---EEV---IYYVRDGNVLSCPDN---CPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred ---HHH---HHHHhcCCCCCCCCC---CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 110 111111111111111 1235778899999999999999999998875
No 224
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.3e-29 Score=259.21 Aligned_cols=227 Identities=25% Similarity=0.385 Sum_probs=166.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCC--------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+... ...+|+|.+..... ......+.+|++++.++ +||||+++++++.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC---hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 568888999999999999997522 24699998864321 23345688999999999 7999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeec
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLD 531 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld 531 (667)
..+..++||||+++|+|.+++..... ..|.||||+||+++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 99999999999999999988854210 11239999999999
Q ss_pred CCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++........ .....+++.|+||| ++.++|||||||++|||++ |+.|+.... ...
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~----~~~ 250 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEE 250 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC----HHH
Confidence 9999999999999865432211 11223457899999 4678999999999999998 888874221 111
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.... .........+. . ....+.+++.+||..+|++||||.||++.+......
T Consensus 251 ~~~~-~~~~~~~~~~~---~---~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 251 LFKL-LKEGHRMDKPS---N---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHH-HHcCCCCCCCC---c---CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111 11111111111 1 123566788899999999999999999998876543
No 225
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.1e-30 Score=253.26 Aligned_cols=227 Identities=26% Similarity=0.340 Sum_probs=160.2
Q ss_pred CCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----c
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-----H 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-----~ 495 (667)
.|...+++|.|+||.||+|.... ++.+|||++..... ---+|+.+|++++|||||++.-+|.... .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r--------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR--------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC--------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 35567889999999999998644 68899999754322 1237999999999999999988886432 3
Q ss_pred eEEEEEecCCCChHHHhcc-----cc-----------------------CCcccccccCCeeecCC-CceEEeccccccc
Q 042735 496 SILIYEYLKRGSLATNLSN-----DA-----------------------AAEELDISSKNVLLDLE-HKAHVSDFGIAKF 546 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~-----~~-----------------------~~~~~dlk~~NiLld~~-~~~kl~DFGla~~ 546 (667)
..+||||||. +|++.+.. .+ ..-|.||||+|+|+|.+ |.+||||||-|+.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 3589999996 77776652 11 11134999999999965 9999999999999
Q ss_pred ccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC---------Chhhh---hhh
Q 042735 547 LKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP---------SPSVI---NMR 607 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~---------~~~~~---~~~ 607 (667)
+.......+.. =|..|-||| |+.+.||||.|||+.||+-|++-|...+.... .+... .+.
T Consensus 176 L~~~epniSYi-cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 176 LVKGEPNISYI-CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eccCCCceeEE-EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 87766554433 477999998 88999999999999999999987653322111 11110 011
Q ss_pred hc--cccCCCCCCCC-C--chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 608 LD--EMLDPRLPPPS-P--DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 608 ~~--~~~~~~~~~~~-~--~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.. +.-.|.+.... . .......+.++++.+++..+|.+|.++.|++.+.+|-
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFd 310 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFD 310 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhH
Confidence 00 11111111111 0 1111223577889999999999999999999998875
No 226
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1e-29 Score=264.31 Aligned_cols=160 Identities=20% Similarity=0.349 Sum_probs=124.1
Q ss_pred cceeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCceEEEE
Q 042735 426 KYCIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHSILIY 500 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~~lv~ 500 (667)
...||+|+||.||+|+.. .+..+|+|.+..... ...+.+|++++++++|||||++++++.. ....++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 357999999999999864 456899998764321 2346789999999999999999998864 45688999
Q ss_pred EecCCCChHHHhccc---------------------------------cCCcccccccCCeee----cCCCceEEecccc
Q 042735 501 EYLKRGSLATNLSND---------------------------------AAAEELDISSKNVLL----DLEHKAHVSDFGI 543 (667)
Q Consensus 501 ey~~~g~L~~~l~~~---------------------------------~~~~~~dlk~~NiLl----d~~~~~kl~DFGl 543 (667)
||+.+ +|.+.+... ....|.||||+|||+ +.++.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 99875 665554211 011244999999999 4668999999999
Q ss_pred cccccCCCC---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCC
Q 042735 544 AKFLKPDSS---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 544 a~~~~~~~~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
++....... ......||+.|+||| |+.++||||+||++|||+||++||.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 987543221 223467899999999 4568999999999999999999985
No 227
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=1.9e-29 Score=254.51 Aligned_cols=224 Identities=25% Similarity=0.383 Sum_probs=167.4
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|++++++++||||++++|++.+.+..+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 56888899999999999999864 567899998764322 2346789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++++|.+.+.... ...|.||||+||+++.++.+||+|||++..........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 158 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR 158 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcc
Confidence 99999999988765431 01234999999999999999999999998765433233
Q ss_pred ccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....|+..|+|||. +.++|||||||++|||+||+.|+...... .......... ..+.. ......
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~---~~~~~~~~~~-~~~~~---~~~~~~ 231 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM---RALFLISKSN-FPPPK---LKDKEK 231 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcc-CCCcc---ccchhh
Confidence 45678999999993 23689999999999999999997532211 1111111010 11100 011112
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
....+.+++.+||..+|.+|||+++|+.+-
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 232 WSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred hhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 234577889999999999999999998753
No 228
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=4.4e-29 Score=259.02 Aligned_cols=226 Identities=24% Similarity=0.387 Sum_probs=165.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC--------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+.. ....+|+|.+..... ......+.+|+++++++ +|||||++++++.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 46778899999999999999642 234688998764322 23345788999999999 5999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeec
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLD 531 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld 531 (667)
+.+..++||||+++|+|.+++.... ...|.||||+||+++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT 168 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence 9999999999999999998875321 011239999999999
Q ss_pred CCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++........ .....++..||||| ++.++|||||||++|||++ |+.||..... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~----~~ 244 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV----EE 244 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH----HH
Confidence 9999999999999866432211 11223456899999 4678999999999999999 8888753211 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.... .........+. . ...++.+++.+||..+|++|||+.|+++.+.....
T Consensus 245 ~~~~-~~~~~~~~~~~---~---~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 245 LFKL-LREGHRMDKPS---N---CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHH-HHcCCCCCCCC---C---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111 11111111111 1 12246678889999999999999999998887654
No 229
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=7.2e-30 Score=261.24 Aligned_cols=235 Identities=20% Similarity=0.353 Sum_probs=167.7
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+....||+|+||.||+|... +++.+|+|++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD--PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC--ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 36778889999999999999875 5788999987543211 11234688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||++++.+........ ...|.||||+||+++.++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99999998876653221 112349999999999999999999999987654433333
Q ss_pred cccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh------hhccccCC-------C
Q 042735 556 ALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM------RLDEMLDP-------R 615 (667)
Q Consensus 556 ~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~------~~~~~~~~-------~ 615 (667)
...|+..|+|||+ +.++|||||||++|||+||+.||............... ......+. .
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 4568899999993 46899999999999999999998532211000000000 00000000 0
Q ss_pred CCCCC--Cch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 616 LPPPS--PDV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 616 ~~~~~--~~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+.+. ... ......+.+++.+||+.+|++|||+.|++.+.||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 01000 000 0112356789999999999999999999988765
No 230
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=4.2e-30 Score=264.37 Aligned_cols=222 Identities=24% Similarity=0.379 Sum_probs=165.7
Q ss_pred cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 426 KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
...||+|+||.||+|.. .++..+|+|.+..... ...+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 34689999999999976 4678899998754221 224568899999999999999999999999999999999999
Q ss_pred CCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 505 RGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 505 ~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
+++|...+..... ..|.||||+||+++.++.+||+|||+++.............|+.
T Consensus 102 ~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 102 GGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 9999876643221 12349999999999999999999999986554433334567999
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| ++.++|||||||++|||++|+.||...... ... ........+.... .. .....+.+++.
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~-~~~~~~~~~~~~~-~~---~~~~~l~~~i~ 252 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAM-KRLRDSPPPKLKN-AH---KISPVLRDFLE 252 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHH-HHHhccCCCCccc-cC---CCCHHHHHHHH
Confidence 999999 366899999999999999999997532210 000 0111110111110 01 11224667888
Q ss_pred hccccCCCCCCCHHHHHHHHHHhhh
Q 042735 636 SCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 636 ~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+||+.+|++||++++++++.++...
T Consensus 253 ~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 253 RMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999999999999999887644
No 231
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=1.6e-29 Score=254.29 Aligned_cols=223 Identities=19% Similarity=0.335 Sum_probs=167.8
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||++.. .++..+|+|++..... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 467788999999999999975 4678899998754321 1233457899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++++|.+.+..... ..|.||+|+||+++.++.+||+|||++..........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA 158 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh
Confidence 99999999887754211 0123999999999999999999999998664433223
Q ss_pred ccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|++.|+|||+ +.++|||||||++|||+||+.|+..... .... ........+..... ...
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~----~~~~~~~~~~~~~~---~~~ 227 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM----KNLV----LKIIRGSYPPVSSH---YSY 227 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH----HHHH----HHHhcCCCCCCccc---CCH
Confidence 34568999999994 5689999999999999999999753210 1111 11111111111111 123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+.+++.+||+.+|++||+|.||+++.|+
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 46788889999999999999999998664
No 232
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=4.1e-29 Score=251.95 Aligned_cols=220 Identities=22% Similarity=0.382 Sum_probs=162.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+....||+|+||.||+|...++..+|+|++.... ...+.|.+|++++++++|||++++++++. .+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 3577788999999999999998777779999875422 12356889999999999999999999885 45688999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+++..... ..|.||||+||++++++.+||+|||+++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 99999999988754211 112399999999999999999999999865432211
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+|||+ +.++|||||||++|||+| |+.||..... ..... .......+..+ . ..
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~~~~~~~~---~---~~ 228 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN----REVLE-QVERGYRMPCP---Q---GC 228 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHcCCCCCCC---c---cc
Confidence 122346778999994 568999999999999999 8888753211 11111 11111111111 1 12
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++||++++|.+.+..
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 229 PESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2356788889999999999999999988753
No 233
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=2.7e-29 Score=252.78 Aligned_cols=223 Identities=24% Similarity=0.354 Sum_probs=165.8
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-ARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~~~~~lv 499 (667)
+|+..+.||+|++|.||+|... +++.+|+|++..... .....+.+.+|++++++++|||++++++.+.. ....++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 4677889999999999999764 467899998754222 12334568899999999999999999998764 4467899
Q ss_pred EEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+++++|.+++..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM 158 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCc
Confidence 999999999887754210 113399999999999999999999999876544333
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....|++.|+||| ++.++|||||||++|||++|+.|+..... ..... .......+..... ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~----~~~~~----~~~~~~~~~~~~~---~~ 227 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM----NSLVY----RIIEGKLPPMPKD---YS 227 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH----HHHHH----HHHhcCCCCCccc---cC
Confidence 44567899999999 35689999999999999999999753221 11111 1111111111111 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.+++.+||+.+|++|||+.+++++.|+
T Consensus 228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 228 PELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 256788889999999999999999988663
No 234
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=5.8e-29 Score=251.24 Aligned_cols=229 Identities=24% Similarity=0.395 Sum_probs=174.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|++|.||+|... ++..++||++...... ...+.+.+|++.+.+++||||+++++++...+..++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence 36788899999999999999875 4889999988654321 3456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc-------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++++|.+++... ....|.|++|+||+++.++.+||+|||+++.........
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 9999999998877531 122345999999999999999999999998765544433
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....|+..|+||| ++.++||||||+++|||+||+.|+..... ..... ....+.....+..... ....
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~---~~~~~~~~~~~~~~~~--~~~~ 230 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFE---LMQAICDGPPPSLPAE--EFSP 230 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHH---HHHHHhcCCCCCCCcc--cCCH
Confidence 3567899999999 35689999999999999999999864321 00000 0111111111111111 0123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+.+++.+||..+|++|||+.|++++.|+..
T Consensus 231 ~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 5677888999999999999999999988754
No 235
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96 E-value=2.2e-30 Score=261.06 Aligned_cols=228 Identities=27% Similarity=0.447 Sum_probs=166.6
Q ss_pred CcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|+... ++.+|+|.+..... .........+|+.++++++||||+++++++.+....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc--cccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 4567889999999999998755 56899999876422 12222345669999999999999999999999999999999
Q ss_pred ecCCCChHHHhccc-cC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccc
Q 042735 502 YLKRGSLATNLSND-AA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSAL 557 (667)
Q Consensus 502 y~~~g~L~~~l~~~-~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~ 557 (667)
|+++++|.+++... .. ..|.||||+||++++++.++|+|||.+.............
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 158 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPF 158 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999887621 11 1234999999999999999999999998643333334556
Q ss_pred cccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 558 VGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 558 ~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.||..|+|||. +.++||||+|+++|||++|+.|+..... ..... .......................+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS----DDQLE-IIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp SSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH----HHHHH-HHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc----hhhhh-hhhhcccccccccccccchhHHHH
Confidence 78999999993 4579999999999999999999764310 00000 000000000000000000112467
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+++.+||+.+|++||++.+++++.||
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 788899999999999999999998875
No 236
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96 E-value=6.6e-30 Score=267.22 Aligned_cols=234 Identities=23% Similarity=0.294 Sum_probs=166.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+++... +..+|+|.+.+... ........|.+|+.++..++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 368888999999999999998754 67799998753211 1112234588899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc--cC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 500 YEYLKRGSLATNLSND--AA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~--~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
|||+++|+|.+++... .. ..|.||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999888542 10 11349999999999999999999999976543322 2
Q ss_pred cccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 554 WSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
....+||+.||||| |+.++|||||||++|||++|+.||...... ...............+.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHKERFQFPAQVTD 235 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----HHHHHHhCCCccccCCCcccc
Confidence 23457999999999 345899999999999999999998633211 111111111011111211111
Q ss_pred hHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHHHHHhhhhh
Q 042735 623 VQGKLISIMEVAFSCLDV--SPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~--~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
.. ..+.+++.+|+.. ++..||+++|++++.||....|
T Consensus 236 ~s---~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 236 VS---EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred CC---HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence 11 2345566676654 4445799999999999876554
No 237
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=5.2e-29 Score=253.98 Aligned_cols=223 Identities=20% Similarity=0.394 Sum_probs=162.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|+..+.||+|+||.||+|.+ .++. .||+|.+..... ....+.+.+|+.++.++.||||++++|++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---PKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence 5788889999999999999975 3443 379998764322 2334678999999999999999999999975 45
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.+++|||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 7789999999999988864211 113399999999999999999999999876533
Q ss_pred CCCc--ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SSNW--SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~~~--~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.... ....+++.|+||| ++.++|||||||++|||+| |+.||..... ..... .+.....+..+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~--- 234 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----REIPD-LLEKGERLPQPP--- 234 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH-HHHCCCcCCCCc---
Confidence 2211 1223567899999 4678999999999999998 8888753211 11111 111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.....+.+++.+||+.||++||++.++++.+...
T Consensus 235 ---~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 235 ---ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred ---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 1223567788899999999999999999887654
No 238
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=1.7e-29 Score=256.50 Aligned_cols=228 Identities=26% Similarity=0.439 Sum_probs=164.7
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCc------hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSD------QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~------~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
|...+.||+|+||.||+|.. .++..+|+|.+....... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 55677899999999999975 467889999875321110 11123468899999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+++|+|.+.+..... ..|.||||+||+++.++.+|++|||+++......
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 162 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY 162 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc
Confidence 9999999999999887754321 1133999999999999999999999998654321
Q ss_pred --CCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 --SNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 --~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.......|+..|+||| ++.++|||||||++||+++|+.|+...... ....... .....+..+..
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~-~~~~~~~~~~~-- 236 (272)
T cd06629 163 DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI---AAMFKLG-NKRSAPPIPPD-- 236 (272)
T ss_pred cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH---HHHHHhh-ccccCCcCCcc--
Confidence 1123456899999999 355799999999999999999997532210 0000000 00011111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
........+.+++.+||..+|++|||+++|+++.|
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 00112235677888999999999999999998865
No 239
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=2.3e-29 Score=257.40 Aligned_cols=230 Identities=19% Similarity=0.266 Sum_probs=167.5
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||+||+|.. .+++.+|+|.+...... .......+.+|++++++++|+||+++++++..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 55667899999999999976 56788999987543211 11223457889999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SIR 159 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-ccc
Confidence 999999987664321 11134999999999999999999999997654322 223
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...|++.|+||| ++.++|||||||++|||+||+.||......... .......... ....+.. ....
T Consensus 160 ~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~-~~~~~~~~~~-~~~~~~~------~~~~ 231 (285)
T cd05632 160 GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR-EEVDRRVLET-EEVYSAK------FSEE 231 (285)
T ss_pred CCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhhhcc-ccccCcc------CCHH
Confidence 457999999999 467899999999999999999998632210000 0000000000 0111111 1124
Q ss_pred HHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhh
Q 042735 630 IMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYF 662 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~ 662 (667)
+.+++..||+.+|++||+ +.+++.+.|+....+
T Consensus 232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 232 AKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred HHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 567888999999999999 889999988865543
No 240
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=1e-29 Score=258.32 Aligned_cols=224 Identities=24% Similarity=0.372 Sum_probs=165.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCC--
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHAR-- 494 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~-- 494 (667)
++++|+..+.||+|+||.||+|... ++..+++|.+.... ...+.|.+|+++++++ +||||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 4678999999999999999999874 56789999875432 1345789999999999 6999999999997644
Q ss_pred ----ceEEEEEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEeccc
Q 042735 495 ----HSILIYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 495 ----~~~lv~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
..++||||+++++|.+.+.... ...|.||+|+||+++.++.+||+|||
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 4899999999999987764311 01133999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccc
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
++..............|++.|+|||+ +.++|||||||++|||+||+.||...... ..... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~--~~~~ 233 (275)
T cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALFK--IPRN 233 (275)
T ss_pred cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHHH--hhcc
Confidence 99865443333344678999999993 45799999999999999999997532110 00000 0010
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
..+... ........+.+++.+||..||++|||++|++++.|
T Consensus 234 ~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 234 PPPTLK----SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred CCCCCC----chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 111111 11112235678888999999999999999998765
No 241
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=1.7e-29 Score=263.64 Aligned_cols=234 Identities=18% Similarity=0.238 Sum_probs=162.2
Q ss_pred cceeecc--cCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 426 KYCIGSG--RHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 426 ~~~lg~g--~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
..+||+| +||+||++.. .+++.||+|++...... ....+.+.+|+++++.++|||||++++++..++..++||||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhcc--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 4578999 6889999976 56888999998653221 22345677899999999999999999999999999999999
Q ss_pred cCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC----
Q 042735 503 LKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS---- 552 (667)
Q Consensus 503 ~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~---- 552 (667)
+++|+|.+.+.... . ..|.||||+||+++.++.++++|||.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 99999988774311 0 11349999999999999999999987543321111
Q ss_pred ---CcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc---------
Q 042735 553 ---NWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML--------- 612 (667)
Q Consensus 553 ---~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 612 (667)
......++..|+||| |+.++|||||||++|||+||+.||.....................
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112235778899999 346899999999999999999998632110000000000000000
Q ss_pred ----------CC----------CCCCC-----CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 613 ----------DP----------RLPPP-----SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 613 ----------~~----------~~~~~-----~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+. ..+.. .+........+.+++.+||+.||++|||++|++++.||....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00 00000 000011123567889999999999999999999999997543
No 242
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=6e-29 Score=252.28 Aligned_cols=216 Identities=24% Similarity=0.361 Sum_probs=155.8
Q ss_pred eeecccCeEEEEEEeCC-Cc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEec
Q 042735 428 CIGSGRHGSVYRAELPS-KE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~-~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.||+|+||.||+|...+ +. .+++|.+.... .....+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 58999999999998754 33 46788765322 123345789999999999 7999999999999999999999999
Q ss_pred CCCChHHHhccccC----------------------------------------CcccccccCCeeecCCCceEEecccc
Q 042735 504 KRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 504 ~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
++|+|.+++..... ..|.||||+||++++++.+|++|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 99999988753210 11239999999999999999999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
++....... ......+..|+||| ++.++|||||||++|||+| |+.||..... ...... .........
T Consensus 159 ~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~----~~~~~~-~~~~~~~~~ 232 (270)
T cd05047 159 SRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEK-LPQGYRLEK 232 (270)
T ss_pred ccccchhhh-ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH----HHHHHH-HhCCCCCCC
Confidence 864321111 11223456799999 3568999999999999997 9999753211 111110 000001111
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+.. ....+.+++.+||+.+|.+|||++|+++.|...
T Consensus 233 ~~~------~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 233 PLN------CDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCc------CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 111 112466888999999999999999999998653
No 243
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=4.2e-29 Score=251.39 Aligned_cols=216 Identities=26% Similarity=0.430 Sum_probs=160.1
Q ss_pred ceeecccCeEEEEEEeCC--C--ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAELPS--K--EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~--~--~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|++|.||+|.+.. + ..+|+|.+...... ...+.|.+|++++++++|||||++++++.+ ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 358999999999998643 2 25899988654322 445689999999999999999999999988 889999999
Q ss_pred cCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC---
Q 042735 503 LKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN--- 553 (667)
Q Consensus 503 ~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~--- 553 (667)
+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999988754320 113399999999999999999999999876542221
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+||| ++.++|||||||++|||+| |+.||...... ...... .. .....+.+ . ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~-~~-~~~~~~~~-~---~~ 226 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS----QILKKI-DK-EGERLERP-E---AC 226 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH-Hh-cCCcCCCC-c---cC
Confidence 12345788999999 3568999999999999999 99997532211 111100 00 01111111 1 11
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+++.+||+.+|++|||++|+++.|.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 235677888999999999999999998874
No 244
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-31 Score=295.10 Aligned_cols=225 Identities=27% Similarity=0.411 Sum_probs=171.0
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
-++.....||.|.||.||-|. ...|+..|||.+.-.... ....+...+|+.++..+.|||+|++||+-.+.+..+|.
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 455666789999999999996 567888999987643222 23345678999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccCCc------------------------ccccccCCeeecCCCceEEecccccccccCCCC---
Q 042735 500 YEYLKRGSLATNLSNDAAAE------------------------ELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~~~------------------------~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--- 552 (667)
||||++|+|++.+...++.. |.|+||.||+||.+|.+|++|||.|..+.....
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 99999999999887654322 349999999999999999999999987765421
Q ss_pred -CcccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 553 -NWSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 553 -~~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
......||+.|||||. ..++||||+|||++||+||++||...+..+. +-..+....-|.+|..
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a----IMy~V~~gh~Pq~P~~--- 1465 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA----IMYHVAAGHKPQIPER--- 1465 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH----HHhHHhccCCCCCchh---
Confidence 1234689999999993 2468999999999999999999874332211 1111111222333322
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
-..+-.+++.+|++.||++|.++.|++++-+.
T Consensus 1466 ---ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1466 ---LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred ---hhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 22234578889999999999999999987553
No 245
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.96 E-value=4.6e-29 Score=250.19 Aligned_cols=216 Identities=28% Similarity=0.453 Sum_probs=160.3
Q ss_pred ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCC
Q 042735 427 YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRG 506 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g 506 (667)
+.||+|+||.||+|...++..+|+|++...... ...+.|.+|++++++++||||+++++++.+....++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP---DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH---HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 368999999999998876889999987654321 34567999999999999999999999999999999999999999
Q ss_pred ChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc--ccccc
Q 042735 507 SLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW--SALVG 559 (667)
Q Consensus 507 ~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~--~~~~G 559 (667)
+|.+++..... ..|.|+||+||+++.++.+||+|||+++......... ....+
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 99888743211 1123999999999999999999999998654221110 11234
Q ss_pred cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 560 TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 560 t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
+..|+||| ++.++|||||||++|||+| |..||..... .......... ...+. +. .....+.+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~~~~~~~~~--~~~~~--~~--~~~~~~~~ 226 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQTRERIESG--YRMPA--PQ--LCPEEIYR 226 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HHHHHHHhcC--CCCCC--Cc--cCCHHHHH
Confidence 56799999 4668999999999999999 7888643221 1111111110 11111 11 12235778
Q ss_pred HHHhccccCCCCCCCHHHHHHHHH
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
++.+||..+|++|||++|+++.|.
T Consensus 227 li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 227 LMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHhccChhhCcCHHHHHHHhh
Confidence 899999999999999999998874
No 246
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=5.7e-29 Score=250.29 Aligned_cols=216 Identities=25% Similarity=0.427 Sum_probs=160.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE-eCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCS-HARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~-~~~~~~lv 499 (667)
.+|...+.||+|+||.||+|... +..+|+|..... ...+.|.+|+.++++++|||+++++|++. +....++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 47788899999999999999775 566899987532 12356899999999999999999999765 45678999
Q ss_pred EEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 999999999988754321 1133999999999999999999999998654322
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
....++..|+||| ++.++|||||||++|||++ |+.|+..... .... ........+..+.. .
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~----~~~~-~~~~~~~~~~~~~~------~ 224 (256)
T cd05082 157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVV-PRVEKGYKMDAPDG------C 224 (256)
T ss_pred -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHHH-HHHhcCCCCCCCCC------C
Confidence 2334567899999 4668999999999999998 9988753211 0111 11111111111111 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.+|++|||++++.+.|..
T Consensus 225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 225 PPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2356788889999999999999999988753
No 247
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=2e-29 Score=258.73 Aligned_cols=235 Identities=19% Similarity=0.243 Sum_probs=164.3
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
++++|...+.||+|+||.||+|.. .++..+|+|.+...... .....+.+|++++++++|+||+++++++..++..+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 79 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLT 79 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEE
Confidence 346788899999999999999976 46788999987643221 11235778999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
+||||+. +++.+.+.... ...|.||||+||+++.++.+||+|||+++.......
T Consensus 80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 80 FVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred EEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9999996 66655543211 112349999999999999999999999986543333
Q ss_pred CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCC------------Chhhh------hhh
Q 042735 553 NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILP------------SPSVI------NMR 607 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~------------~~~~~------~~~ 607 (667)
......+++.|+|||+ +.++|||||||++|||+||+.||........ ..... ...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07870 159 TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNY 238 (291)
T ss_pred CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccc
Confidence 3334568999999994 3468999999999999999999863321100 00000 000
Q ss_pred hccccCCCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 608 LDEMLDPRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 608 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+......+..... .......+.+++.+|++.||++|||++|++.+.||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 239 KPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 000000000000000 00012356678899999999999999999988764
No 248
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=3.9e-29 Score=252.92 Aligned_cols=226 Identities=22% Similarity=0.310 Sum_probs=163.0
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~ 496 (667)
.+|+..+.||+|+||.||+|.. .++..+|+|.+...... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999976 45788999987532221 1223345788999999999999999999998764 467
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC-
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS- 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~- 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 899999999999987743211 1133999999999999999999999998654211
Q ss_pred --CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 --SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 --~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.......||..|+|||. +.++|||||||++|||++|+.||..... ...... ....+..+. .+.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~---~~~~~~~~~-~~~- 232 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFK---IATQPTNPV-LPP- 232 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHH---HhcCCCCCC-Cch-
Confidence 12234568999999993 5689999999999999999999753211 111110 111111111 111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+.+++.+|+. +|++||+++||+++.|.
T Consensus 233 -~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 233 -HVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred -hhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 112245567778885 89999999999988663
No 249
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=9.8e-30 Score=269.56 Aligned_cols=236 Identities=20% Similarity=0.319 Sum_probs=165.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA----- 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~----- 493 (667)
.++|...+.||+|+||.||+|.. ..++.+|||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN--QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC--chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 56899999999999999999975 45788999998654322 22345688999999999999999999987543
Q ss_pred -CceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 494 -RHSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
...++||||+++ ++.+.+... ....|.||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 357999999986 554433211 12235599999999999999999999999865432
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh---hhcc
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM---RLDE 610 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~---~~~~ 610 (667)
...+...||+.|+||| |+.++|||||||++|||+||+.||....... +.+..... ....
T Consensus 180 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (364)
T cd07875 180 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258 (364)
T ss_pred -CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHH
Confidence 2234467999999999 5778999999999999999999986322110 00000000 0000
Q ss_pred ccC--CCC--------------CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 611 MLD--PRL--------------PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 611 ~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
... +.. +............+.+++.+|++.||++|||+.|++++.|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 000 000 0000000001235678899999999999999999999998853
No 250
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=2.6e-29 Score=254.78 Aligned_cols=224 Identities=22% Similarity=0.445 Sum_probs=164.5
Q ss_pred CCcCcceeecccCeEEEEEEeCC--CceEEEEecCCCCCC------chHHhHHHHHHHHHHHHh-cCCCCeeEEEEEEEe
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS--KEFLAVKKFNSPLPS------DQIADQKEFFAEIEALTK-IRHRNIVKFYGFCSH 492 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~--~~~~avk~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~H~niv~~~g~~~~ 492 (667)
+|+..+.||+|+||.||+|.... +..+|+|.+...... .......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36677889999999999998755 678999987532111 112234567889998875 799999999999999
Q ss_pred CCceEEEEEecCCCChHHHhccc-----------------------------cCCcccccccCCeeecCCCceEEecccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSND-----------------------------AAAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~-----------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
.+..++||||+++++|.+.+... ....|.||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999998765210 1112449999999999999999999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
+....... ......|+..|+||| ++.++|||||||++|||++|+.|+...... .... ...+....
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~ 231 (269)
T cd08528 161 AKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----SLAT----KIVEAVYE 231 (269)
T ss_pred eeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH----HHHH----HHhhccCC
Confidence 98755433 334567899999999 356899999999999999999997532211 0111 11111111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
+.... .....+.+++.+||+.||++||++.|+..++.
T Consensus 232 ~~~~~--~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 232 PLPEG--MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCcc--cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110 11235677888999999999999999998874
No 251
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=6.8e-29 Score=250.22 Aligned_cols=215 Identities=27% Similarity=0.496 Sum_probs=163.2
Q ss_pred ceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|+||.||+|.... +..+++|.+...... ...+.+.+|++.+++++||||+++++++......++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 368999999999998653 778999988654322 1356789999999999999999999999999999999999
Q ss_pred cCCCChHHHhccc---------cC------------------------CcccccccCCeeecCCCceEEecccccccccC
Q 042735 503 LKRGSLATNLSND---------AA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 503 ~~~g~L~~~l~~~---------~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
+++|+|.+++... .. ..|.||||+||+++.++.+||+|||.++....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999988653 11 01239999999999999999999999987654
Q ss_pred CC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 550 DS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 550 ~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
.. .......+++.|+||| ++.++||||+||++|||++ |+.||..... ...... .........+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~~~~ 232 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----EEVLEY-LRKGYRLPKPEYC 232 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH-HHcCCCCCCCccC
Confidence 32 1223456788999999 4668999999999999999 6888764321 111111 1111111111111
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..++.+++.+||..+|++|||+.|+++++
T Consensus 233 ------~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 233 ------PDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred ------ChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 23567888899999999999999999876
No 252
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=2.1e-29 Score=261.90 Aligned_cols=159 Identities=20% Similarity=0.354 Sum_probs=123.1
Q ss_pred ceeecccCeEEEEEEeCC---CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCceEEEEE
Q 042735 427 YCIGSGRHGSVYRAELPS---KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHSILIYE 501 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~---~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~~lv~e 501 (667)
..||+|+||.||+|+..+ +..+|+|.+.... ....+.+|++++++++|||||++++++.. ....++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999998643 4679999875431 12357789999999999999999999854 457889999
Q ss_pred ecCCCChHHHhccc---------------------------------cCCcccccccCCeee----cCCCceEEeccccc
Q 042735 502 YLKRGSLATNLSND---------------------------------AAAEELDISSKNVLL----DLEHKAHVSDFGIA 544 (667)
Q Consensus 502 y~~~g~L~~~l~~~---------------------------------~~~~~~dlk~~NiLl----d~~~~~kl~DFGla 544 (667)
|+++ +|.+.+... ....|.||||+||++ +.++.+||+|||++
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 9885 555443210 011234999999999 56789999999999
Q ss_pred ccccCCCC---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCC
Q 042735 545 KFLKPDSS---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 545 ~~~~~~~~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
+....... ......||+.|+||| ++.++|||||||++|||+||++||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 87643221 223457899999999 3567999999999999999999985
No 253
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=3.7e-29 Score=254.30 Aligned_cols=207 Identities=22% Similarity=0.384 Sum_probs=150.4
Q ss_pred eeecccCeEEEEEEeCC-------------------------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC
Q 042735 428 CIGSGRHGSVYRAELPS-------------------------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN 482 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~-------------------------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 482 (667)
.||+|+||.||+|.... ...+++|.+... .......|.+|+.++++++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999996421 124788876532 1223457889999999999999
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCC---
Q 042735 483 IVKFYGFCSHARHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEH--- 534 (667)
Q Consensus 483 iv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~--- 534 (667)
||+++|++.+....++||||+++|+|..++.... ...|.||||+||+++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 9999999999999999999999999988775421 112349999999998654
Q ss_pred ----ceEEecccccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHH-hCCCCCCCCccCCCChh
Q 042735 535 ----KAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVI-KGKHPRGFVSSILPSPS 602 (667)
Q Consensus 535 ----~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~Ell-tG~~p~~~~~~~~~~~~ 602 (667)
.+|++|||++...... ....|+..|+||| ++.++|||||||++|||+ +|+.|+..... ..
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~ 229 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP----SE 229 (274)
T ss_pred CccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh----HH
Confidence 3799999998654322 2235788999999 355799999999999995 78888753211 00
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
. ...... ....+.+. ...+.+++.+||+.+|++||||.+|++.|
T Consensus 230 ~-~~~~~~--~~~~~~~~------~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 K-ERFYEK--KHRLPEPS------CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred H-HHHHHh--ccCCCCCC------ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 0 000000 11122211 12467888899999999999999999876
No 254
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=4.5e-30 Score=268.23 Aligned_cols=234 Identities=22% Similarity=0.275 Sum_probs=168.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.+|+|.+..... ........+.+|+.++..++||||+++++++.+.+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM-LKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 46888899999999999999864 567899998754211 1122344588899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc--cC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 500 YEYLKRGSLATNLSND--AA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~--~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
|||+++|+|.+++... .. ..|.||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999887541 11 11349999999999999999999999986654322 2
Q ss_pred cccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 554 WSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
....+||+.||||| ++.++|||||||++|||+||+.||...... ...............+.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~ 235 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHEERFQFPSHITD 235 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH----HHHHHHHcCCCcccCCCcccc
Confidence 23457999999999 245799999999999999999998532210 111100000001111211111
Q ss_pred hHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHHHHhhhhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPES--RPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~--RPt~~ev~~~l~~~~~~~ 662 (667)
....+.+++.+|+..++++ |+++++++++.||....|
T Consensus 236 ---~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~ 274 (331)
T cd05624 236 ---VSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDW 274 (331)
T ss_pred ---CCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence 1234566777888765544 579999999998876544
No 255
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=2.4e-29 Score=257.22 Aligned_cols=224 Identities=23% Similarity=0.342 Sum_probs=167.9
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|...+.||+|++|.||+|.. .++..+++|++.... ....+.+.+|+.++++++||||+++++++..++..++|+|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 44457899999999999975 567889999875321 1234568899999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccc
Q 042735 502 YLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALV 558 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~ 558 (667)
|+++++|.+.+..... ..|.||||+||+++.++.+|++|||+++.............
T Consensus 97 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 97 FLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence 9999999987754221 11349999999999999999999999876544333333457
Q ss_pred ccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 559 GTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 559 Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
|++.|+||| ++.++|||||||++|||++|+.||..... ............+..... . .....+.+
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~-~---~~~~~l~~ 247 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDNLPPKLKNL-H---KVSPRLRS 247 (285)
T ss_pred CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhcCCCCCccc-c---cCCHHHHH
Confidence 899999999 46789999999999999999999753211 000011111111111111 0 11235778
Q ss_pred HHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 633 VAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 633 ~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
++.+||+.+|++|||+.+++++.++..
T Consensus 248 li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 248 FLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred HHHHHcccChhhCcCHHHHccCccccc
Confidence 889999999999999999999888754
No 256
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=1.2e-29 Score=259.45 Aligned_cols=233 Identities=21% Similarity=0.295 Sum_probs=163.8
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|+.. ++..+|||++....... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE--GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc--ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 4778889999999999999764 67889999886433221 22346889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+. ++|..++.... ...|.||+|+||+++.++.+||+|||+++.........
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 157 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence 9996 57776654311 11234999999999999999999999998664433333
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhcccc--CCC
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLDEML--DPR 615 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~~~~--~~~ 615 (667)
....+++.|+|||+ +.++|||||||++|||+||+.||............... ...... ...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 44567899999992 45799999999999999999997532211000000000 000000 000
Q ss_pred CCCCCCc-h----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 616 LPPPSPD-V----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 616 ~~~~~~~-~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+..... . ......+.+++.+||+.||++|||++|++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000000 0 0011245678899999999999999999988765
No 257
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=9.1e-29 Score=249.70 Aligned_cols=218 Identities=25% Similarity=0.404 Sum_probs=154.8
Q ss_pred ceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCceEEEEE
Q 042735 427 YCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-ARHSILIYE 501 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~~~~~lv~e 501 (667)
+.||+|+||.||+|...+ ...+|+|++.... .....+.+.+|+.++++++||||+++++++.. ++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999997532 3468999875321 22334678899999999999999999998764 556889999
Q ss_pred ecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC----C
Q 042735 502 YLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS----S 552 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~----~ 552 (667)
|+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++...... .
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 9999999988753211 1134999999999999999999999998653221 1
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCC-CCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGK-HPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......++..|+||| ++.++|||||||++|||+||+ +|+..... .... ........+.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~--- 226 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS----FDIT----VYLLQGRRLLQPEY--- 226 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHH----HHHhcCCCCCCCCc---
Confidence 112334677899999 356899999999999999964 45432110 0111 11111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+++.+||+.+|++||++.||++.+...
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 122467888999999999999999999988754
No 258
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=7.1e-29 Score=251.58 Aligned_cols=223 Identities=28% Similarity=0.528 Sum_probs=162.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-C---ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-K---EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~---~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
.+|...+.||+|+||.||+|.... + ..+|||.+..... ....++|..|++++++++||||+++++++.++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT---EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 456778899999999999998643 3 3599998765321 23456799999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999999999887754211 1133999999999999999999999998654322
Q ss_pred CC--cc-cccc--cccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 552 SN--WS-ALVG--TYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 552 ~~--~~-~~~G--t~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.. .. ...| +..|+|||+ +.++|||||||++||+++ |+.||..... ..... ..... ...+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~----~~~~~-~i~~~--~~~~~~ 233 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----QDVIN-AIEQD--YRLPPP 233 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH----HHHHH-HHHcC--CcCCCc
Confidence 11 11 1112 457999993 668999999999999887 9999753221 11111 11111 111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+ ....+.+++.+||+.+|++||++++|+..+..
T Consensus 234 -~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 234 -MD---CPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred -cc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11 12346678889999999999999999988653
No 259
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=4.5e-29 Score=251.19 Aligned_cols=223 Identities=26% Similarity=0.374 Sum_probs=166.0
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
|...+.||+|+||.||+|... ++..+++|.+...... ......+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566788999999999999875 6888999987543211 11233467899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||+++++|.+++..... ..|.||||+||+++.++.+||+|||+++...... ....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~ 160 (258)
T cd06632 82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAKS 160 (258)
T ss_pred EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-cccc
Confidence 99999999888754321 1234999999999999999999999998754332 2234
Q ss_pred ccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 557 LVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 557 ~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..|++.|+||| ++.++|||||||++|||++|+.||..... ...... .......+..+... ...
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~~~~-~~~~~~~~~~~~~~------~~~ 230 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAAVFK-IGRSKELPPIPDHL------SDE 230 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHHHHH-HHhcccCCCcCCCc------CHH
Confidence 67899999999 35679999999999999999999863321 000100 00000011111111 124
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
+.+++.+||+.+|++||++.+++++.+
T Consensus 231 ~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 231 AKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 567888999999999999999998754
No 260
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=7.7e-29 Score=250.43 Aligned_cols=224 Identities=27% Similarity=0.420 Sum_probs=167.9
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|...+.||+|+||.||+|... ++..+++|.+...... ....+.+.+|+.++++++|+||+++++++...+..++|+|
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 667788999999999999864 6788999987654322 2345679999999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC----
Q 042735 502 YLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN---- 553 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~---- 553 (667)
|+++++|.+++..... ..|.||||+||+++.++.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 9999999988765421 113399999999999999999999999876543221
Q ss_pred cccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.....|++.|+|||+ +.++||||||+++||+++|+.||..... .............+..+...
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~---- 231 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----EFQIMFHVGAGHKPPIPDSL---- 231 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc----hHHHHHHHhcCCCCCCCccc----
Confidence 123568899999993 4579999999999999999999863321 11111111111112222211
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.....+.+++.+||+.+|++|||+.|++.+.|
T Consensus 232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 232 QLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 11234567888999999999999999987654
No 261
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.6e-29 Score=259.51 Aligned_cols=234 Identities=19% Similarity=0.283 Sum_probs=163.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|++|.||+|..+ ++..+|+|.+...... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence 367888899999999999999865 5788999987643221 112357789999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+++ +|.+++.... ...|.||||+||+++.++.+||+|||+++........
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 9999985 8887664321 1123499999999999999999999999754322222
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC------------hhhhhh--hhcccc
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS------------PSVINM--RLDEML 612 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~------------~~~~~~--~~~~~~ 612 (667)
.....++..|+||| ++.++|||||||++|||++|+.||......... ...... ......
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 23345788999999 345789999999999999999998532210000 000000 000000
Q ss_pred CCCCCCCCCc-------hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 613 DPRLPPPSPD-------VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 613 ~~~~~~~~~~-------~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+...+. .......+.+++.+|++.+|++|||+.|++++.||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000000000 00011356688899999999999999999988765
No 262
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=5.9e-29 Score=251.18 Aligned_cols=222 Identities=26% Similarity=0.405 Sum_probs=165.1
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCceEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHSIL 498 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~~l 498 (667)
+|+..+.||+|+||.||+|.. .++..+|+|.+...... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT--EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC--HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 467788999999999999975 46788999987643222 2334678899999999999999999998764 446789
Q ss_pred EEEecCCCChHHHhccc---------------------------------cCCcccccccCCeeecCCCceEEecccccc
Q 042735 499 IYEYLKRGSLATNLSND---------------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~---------------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
+|||+++|+|.+.+... ....|.||||+||+++.++.+||+|||+++
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 99999999998766321 112234999999999999999999999999
Q ss_pred cccCCCCCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 546 FLKPDSSNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.............|++.|+|||+ +.++|||||||++|||++|+.|+..... ..... .......+.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~- 232 (265)
T cd08217 159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----LQLAS-KIKEGKFRRIPY- 232 (265)
T ss_pred cccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH----HHHHH-HHhcCCCCCCcc-
Confidence 77654432344678999999993 5679999999999999999999864321 11111 111111111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.....+.+++.+|++.+|++|||+.+|+++.+
T Consensus 233 -----~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 233 -----RYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred -----ccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 11235678888999999999999999998754
No 263
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=6.2e-29 Score=254.02 Aligned_cols=232 Identities=27% Similarity=0.405 Sum_probs=165.2
Q ss_pred CCcCcceeecccCeEEEEEEeC-----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CC
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--AR 494 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~ 494 (667)
+|...+.||+|+||.||+|.+. .+..+|||.+...... ...+.|.+|++++++++||||+++++++.. ..
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 4666788999999999999853 3578999998654321 345679999999999999999999999987 56
Q ss_pred ceEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
..++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 78999999999999988754320 11339999999999999999999999987653
Q ss_pred CCCCc---ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-----hh-hhhhhhccccCC
Q 042735 550 DSSNW---SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-----PS-VINMRLDEMLDP 614 (667)
Q Consensus 550 ~~~~~---~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-----~~-~~~~~~~~~~~~ 614 (667)
..... ....++..|+||| ++.++||||||+++|||+||+.|+......... .. .......+.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 32211 1234556799999 356899999999999999999986532111000 00 000000011111
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+. ....++.+++.+||+.+|++||||+||++++..+
T Consensus 242 ~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPP--SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCc--cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111111 1123577889999999999999999999998753
No 264
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=8.7e-29 Score=249.68 Aligned_cols=220 Identities=24% Similarity=0.466 Sum_probs=165.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|...++..+|||.+..... ..+++.+|+.++++++||||+++++++......++||
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 57888899999999999999988888899998764321 2356899999999999999999999999989999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++........
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 99999999988754210 112399999999999999999999999866432111
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+||| ++.++|||||||++||++| |+.||..... ....... ........+...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~------ 229 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN----REVLEQV-ERGYRMPRPPNC------ 229 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH-HcCCCCCCCCCC------
Confidence 11223456899999 3668999999999999999 9999753211 1111111 111111111111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+++.+|++.+|++||+++++.+.+.
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 230 PEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 235678889999999999999999998764
No 265
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=3.2e-29 Score=256.59 Aligned_cols=229 Identities=24% Similarity=0.393 Sum_probs=173.1
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..+.|+..+.||+|+||.||+|... ++..+++|++..... ..+.+.+|++++++++|||++++++++...+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 3456777788999999999999875 578899998864321 3457889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc--C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA--A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~--~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
+|+||+++++|.+.+.... . ..|.|+||+||+++.++.+||+|||++........
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 9999999999998886542 1 11239999999999999999999999876544332
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......|++.|+||| ++.++|||||||++|||+||+.|+...... .... .......+. .......
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~---~~~~~~~~~-~~~~~~~ 242 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALF---LITTKGIPP-LKNPEKW 242 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHH---HHHhcCCCC-CcchhhC
Confidence 333456889999999 467899999999999999999997532211 0000 000101111 0011111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
...+.+++.+||+.+|.+|||+.+|+++.++...-
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 23466788899999999999999999999987643
No 266
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=1.5e-29 Score=258.59 Aligned_cols=233 Identities=21% Similarity=0.288 Sum_probs=162.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|+.. +|..+|+|++...... ......+.+|++++++++||||+++++++.+....++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 3667788999999999999864 6888999988643221 122345788999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||+++..........
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 99984 6766554211 112349999999999999999999999986554333334
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-----------hhhhhhhhccccCCC-C
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-----------PSVINMRLDEMLDPR-L 616 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~ 616 (667)
...+++.|+||| ++.++|||||||++|||+||+.|+......... ............+.. .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 456889999999 356899999999999999999885311110000 000000000000000 0
Q ss_pred CCCCCc------hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 617 PPPSPD------VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 617 ~~~~~~------~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+..... .......+.+++.+||+.||++|||++|++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000000 00112356688899999999999999999998765
No 267
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=1.1e-28 Score=252.32 Aligned_cols=230 Identities=24% Similarity=0.382 Sum_probs=162.9
Q ss_pred CcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cc
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RH 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~ 495 (667)
|...+.||+|+||.||+|++ .++..+|+|.+..... ....+.+.+|++++++++||||+++++++.+. ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 56678899999999999974 3467899998764321 22345799999999999999999999999775 56
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 8899999999999988753211 113399999999999999999999999865433
Q ss_pred CCC---cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----CCh--hhhhhhhccccCC
Q 042735 551 SSN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----PSP--SVINMRLDEMLDP 614 (667)
Q Consensus 551 ~~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----~~~--~~~~~~~~~~~~~ 614 (667)
... .....|+..|+||| ++.++|||||||++|||+||+.|........ +.. ...........+.
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG 242 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence 221 12345777899999 4678999999999999999887642110000 000 0000000000011
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+... .....+.+++.+||+.+|++|||++++++.+..+
T Consensus 243 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 243 KRLPRPP---NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccCCCCC---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111 1233577899999999999999999999988653
No 268
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=8.6e-29 Score=249.88 Aligned_cols=207 Identities=20% Similarity=0.359 Sum_probs=150.5
Q ss_pred eeecccCeEEEEEEeCC-------------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 428 CIGSGRHGSVYRAELPS-------------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~-------------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.||+|+||.||+|.... ...+++|.+... .......|.+|+.+++.++|||||+++|++....
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 58999999999997532 124778876432 2233457889999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCc-------eEEeccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHK-------AHVSDFG 542 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~-------~kl~DFG 542 (667)
..++||||+++|+|...+.... ...|.||||+|||++.++. +|++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 9999999999999987765321 1123499999999987664 8999999
Q ss_pred ccccccCCCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHH-hCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVI-KGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~Ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
++...... ....|+..|+|||+ +.++|||||||++|||+ +|+.|+..... ..... ....
T Consensus 158 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~----~~~~ 224 (262)
T cd05077 158 IPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-----AEKER----FYEG 224 (262)
T ss_pred CCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-----hHHHH----HHhc
Confidence 98754322 23468889999993 45789999999999998 58877642210 00000 0011
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
......+. ...+.+++.+||+.||++||++.+|++++
T Consensus 225 ~~~~~~~~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QCMLVTPS----CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CccCCCCC----hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11111111 12467888899999999999999999865
No 269
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=4e-30 Score=268.79 Aligned_cols=220 Identities=21% Similarity=0.296 Sum_probs=160.2
Q ss_pred eecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc---CCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 429 IGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI---RHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 429 lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
||+|+||.||+|+. .++..+|||++...... .......+..|..++.+. +||||+++++++.+....++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 69999999999976 45789999987532111 112233456677777665 69999999999999999999999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+.+..... ..|.||||+|||++.++.+||+|||+++............+||
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 9999877654321 1244999999999999999999999998643333334457899
Q ss_pred ccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHH
Q 042735 561 YRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEV 633 (667)
Q Consensus 561 ~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (667)
+.||||| |+.++|||||||++|||+||+.||..... ....... ..-...++.. .. ...+.++
T Consensus 160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~----~~~~~~i--~~~~~~~~~~--~~---~~~~~~l 228 (330)
T cd05586 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT----QQMYRNI--AFGKVRFPKN--VL---SDEGRQF 228 (330)
T ss_pred ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH----HHHHHHH--HcCCCCCCCc--cC---CHHHHHH
Confidence 9999999 46689999999999999999999753221 0111100 0001122211 11 1235578
Q ss_pred HHhccccCCCCCC----CHHHHHHHHHHhhh
Q 042735 634 AFSCLDVSPESRP----TMQTITQQLLFSLV 660 (667)
Q Consensus 634 ~~~Cl~~~p~~RP----t~~ev~~~l~~~~~ 660 (667)
+.+||+.+|++|| +++|++++.|+...
T Consensus 229 i~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 229 VKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred HHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 8899999999998 78999999888643
No 270
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=2.1e-29 Score=271.29 Aligned_cols=227 Identities=19% Similarity=0.234 Sum_probs=160.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|...+.||+|+||.||+|.... +..||||.... ..+.+|++++++++|||||++++++..++..++|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 468888999999999999998754 67899996321 2366899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
|||+. |+|..++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 99995 68877664321 112449999999999999999999999987543221
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCc-c--CCCChhhhhhhhcc--ccCCCCCC---
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVS-S--ILPSPSVINMRLDE--MLDPRLPP--- 618 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~-~--~~~~~~~~~~~~~~--~~~~~~~~--- 618 (667)
......||+.||||| |+.++|||||||++|||++|..|+-... . ..+........+.. ......+.
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 123467999999999 5678999999999999999886632111 0 00010000000000 00000000
Q ss_pred -------------------CCCchH---HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 619 -------------------PSPDVQ---GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 619 -------------------~~~~~~---~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+.+. ..-..+.+++.+||+.||.+|||+.|++++.||.
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 000000 0112466788899999999999999999999885
No 271
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=8.7e-29 Score=249.86 Aligned_cols=224 Identities=25% Similarity=0.329 Sum_probs=167.8
Q ss_pred eecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||.|+||.||+|... .+..+|+|.+....... ....+.+.+|+.++++++||||+++++++.++...++||||+++|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE-TGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh-hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 689999999999875 47889999886533221 2234679999999999999999999999999999999999999999
Q ss_pred hHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccc
Q 042735 508 LATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRY 563 (667)
Q Consensus 508 L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y 563 (667)
|.+.+..... ..|.||||+||+++.++.+||+|||+++...... ......|++.|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~ 158 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEY 158 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCc
Confidence 9988764321 1123999999999999999999999998765432 22335789999
Q ss_pred cCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhc
Q 042735 564 VAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSC 637 (667)
Q Consensus 564 ~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 637 (667)
+||| ++.++|+||||+++|||++|+.|+..... ..................+... ...+.+++.+|
T Consensus 159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~ 230 (262)
T cd05572 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE--DPMEIYNDILKGNGKLEFPNYI------DKAAKDLIKQL 230 (262)
T ss_pred cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC--CHHHHHHHHhccCCCCCCCccc------CHHHHHHHHHH
Confidence 9999 35689999999999999999999864321 0011111111001111111111 23567888899
Q ss_pred cccCCCCCCC-----HHHHHHHHHHhhhhh
Q 042735 638 LDVSPESRPT-----MQTITQQLLFSLVYF 662 (667)
Q Consensus 638 l~~~p~~RPt-----~~ev~~~l~~~~~~~ 662 (667)
|+.+|++||+ ++|++++.||....+
T Consensus 231 l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 231 LRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred ccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9999999999 999999999975443
No 272
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=249.86 Aligned_cols=227 Identities=29% Similarity=0.435 Sum_probs=168.6
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHH--hcCCCCeeEEEEEEEeC----Cc
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALT--KIRHRNIVKFYGFCSHA----RH 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~~~g~~~~~----~~ 495 (667)
.....++||+|.||.||+|+++ |+-||||++... +++.+++|.++-. .+||+||..|++.-..+ .+
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred eeEEEEEecCccccceeecccc-CCceEEEEeccc-------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 4556788999999999999996 556999998652 3457889998876 57999999999876543 37
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
+|||.||-+.|||+++|.... +..|+|||++|||+..++..-|+|+|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred EEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 899999999999999886431 2335699999999999999999999999
Q ss_pred ccccCCCC----CcccccccccccCCCC------------CCCchHHHHHHHHHHHHhC----------CCCCCCCccCC
Q 042735 545 KFLKPDSS----NWSALVGTYRYVAPDY------------RKKCDVYSFRVLALEVIKG----------KHPRGFVSSIL 598 (667)
Q Consensus 545 ~~~~~~~~----~~~~~~Gt~~y~aPE~------------~~~~DV~sfGvvl~ElltG----------~~p~~~~~~~~ 598 (667)
-....+.. .....+||-+|||||. -..+||||||.|+||++.+ +.||. .++-
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy--d~Vp 441 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY--DVVP 441 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc--cCCC
Confidence 76544422 2345689999999993 1358999999999999864 24442 2233
Q ss_pred CChhhhhhhhc---cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 599 PSPSVINMRLD---EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 599 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..++..+++-- +.+.|.+|..... ...+..+.++|..||..+|..|-|+--|.+.+....
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s-~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPNIPNRWKS-DPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCCCHHHHhcceeecccCCCCCccccc-CHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 33444443311 1223444443333 356778889999999999999999988887766543
No 273
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=8.3e-29 Score=256.15 Aligned_cols=223 Identities=24% Similarity=0.364 Sum_probs=164.1
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|+..+.||+|+||.||+|.. .+++.+|+|++...... .....+.+.+|++++++++||||++++|++.+.+..++|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 3467778899999999999986 46788999987543221 223345788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||++ |++.+.+.... ...|.||+|+||+++.++.+||+|||+++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---- 168 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---- 168 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----
Confidence 99998 46555443110 1123499999999999999999999999865432
Q ss_pred ccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
....|++.|+|||+ +.++|||||||++|||+||+.|+...... ...........+..+. ..
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~-----~~ 238 (307)
T cd06607 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNDSPTLSS-----ND 238 (307)
T ss_pred CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHHHhcCCCCCCCc-----hh
Confidence 24578899999993 45899999999999999999997532210 0000000000111111 11
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.+|++||+|.+|+.+.|+..
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 2235678888999999999999999999988764
No 274
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=5.2e-29 Score=255.50 Aligned_cols=224 Identities=25% Similarity=0.375 Sum_probs=171.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... +++.+|+|.+..... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 36778899999999999999864 578899998754211 1122345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+.+..... ..|.||+|+||+++.++.+||+|||+++..... ..
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~ 156 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TY 156 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CC
Confidence 999999999888754321 123499999999999999999999999876543 23
Q ss_pred cccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC--CCCCCCCCchHHHH
Q 042735 556 ALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD--PRLPPPSPDVQGKL 627 (667)
Q Consensus 556 ~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 627 (667)
...|++.|+|||+ +.++||||||+++|||+||+.||...... .. ...... ..++... .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~----~~~~~~~~~~~~~~~------~ 222 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QI----YEKILEGKVRFPSFF------S 222 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HH----HHHHhcCCccCCccC------C
Confidence 4578999999993 56899999999999999999997533210 00 011111 1122211 1
Q ss_pred HHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
..+.+++.+||+.+|.+|| +++|++++.++....+
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 262 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW 262 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence 2456788899999999999 8999999988765543
No 275
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=2.6e-29 Score=264.19 Aligned_cols=235 Identities=21% Similarity=0.330 Sum_probs=165.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA---- 493 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~---- 493 (667)
..++|...+.||+|+||.||+|.. .++..||||++..... .....+.+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 346788889999999999999975 5678899999865322 122345688999999999999999999987543
Q ss_pred --CceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 494 --RHSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 494 --~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
...++++||+ +++|.+.+.... ...|.||||+||+++.++.+||+|||+++...
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 4578999987 678876654321 12245999999999999999999999998654
Q ss_pred CCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh----
Q 042735 549 PDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM---- 606 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~---- 606 (667)
.. .+...||+.|+||| |+.++|||||||++|||++|+.||....... +.......
T Consensus 170 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 170 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred CC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 32 23467999999999 3568999999999999999999985322110 00000000
Q ss_pred hhccccCCCCCCCCCch-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 RLDEMLDPRLPPPSPDV-----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....... .++...... ......+.+++.+|++.||++|||+.|++++.||...
T Consensus 247 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 247 HARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred hHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0000000 000000000 0011235688899999999999999999999998753
No 276
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=3.4e-29 Score=256.86 Aligned_cols=223 Identities=22% Similarity=0.352 Sum_probs=167.3
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~ 505 (667)
..||+|+||.||+|.. .++..+|||++.... ......+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 5689999999999976 567889999875321 12345689999999999999999999999999999999999999
Q ss_pred CChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccccc
Q 042735 506 GSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYR 562 (667)
Q Consensus 506 g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~ 562 (667)
++|.+.+..... ..+.|+||+||+++.++.++|+|||++..............||+.
T Consensus 102 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 102 GALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 999887643221 113499999999999999999999998765433323344678999
Q ss_pred ccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHh
Q 042735 563 YVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFS 636 (667)
Q Consensus 563 y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (667)
|+|||+ +.++|||||||++|||++|+.||...... .... .......+..... ......+.+++.+
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~----~~~~-~~~~~~~~~~~~~----~~~~~~l~~li~~ 252 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMK-MIRDNLPPKLKNL----HKVSPSLKGFLDR 252 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH-HHHhhCCcccCCc----ccCCHHHHHHHHH
Confidence 999993 56899999999999999999997532211 0000 0111111111111 1112245678889
Q ss_pred ccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 637 CLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 637 Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
||+.+|.+||++.+++++.|+.....
T Consensus 253 ~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 253 LLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHhCCcccCcCHHHHhcChHHhccCC
Confidence 99999999999999999999876654
No 277
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=3.2e-29 Score=258.19 Aligned_cols=239 Identities=19% Similarity=0.270 Sum_probs=169.8
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCc-hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSD-QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+|+..+.||+|+||.||+|... +++.+|||++....... .......+..|++++++++||||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667788999999999999864 68899999986543221 112234577899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc--C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA--A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+ +|+|.+.+.... . ..|.||||+||+++.++.+||+|||+++.........
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM 159 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence 9999 899988876432 1 1133999999999999999999999998765443333
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh---------hh----hhccccCC
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI---------NM----RLDEMLDP 614 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~---------~~----~~~~~~~~ 614 (667)
....+++.|+|||+ +.++|||||||++|||++|.+|+............. .. ........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T cd07841 160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF 239 (298)
T ss_pred cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence 44567889999993 457999999999999999987764322110000000 00 00000000
Q ss_pred CCCCCCC---chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 615 RLPPPSP---DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 615 ~~~~~~~---~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
......+ ........+.+++.+||+.+|++|||++|++++.|+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 0000000 0011124567889999999999999999999998887543
No 278
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=6.9e-29 Score=257.94 Aligned_cols=232 Identities=21% Similarity=0.290 Sum_probs=174.4
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... ++..+|+|.+...... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 6778889999999999999875 4889999988654322 1224457889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
||+.+|+|.+++..... ..|.||||+||+++.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999988753210 11339999999999999999999999875432111
Q ss_pred ---------------------------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC
Q 042735 553 ---------------------------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP 599 (667)
Q Consensus 553 ---------------------------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~ 599 (667)
......||..|+||| ++.++|||||||++|||++|+.||......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-- 238 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-- 238 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH--
Confidence 112346899999999 466899999999999999999998633211
Q ss_pred ChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC----HHHHHHHHHHhhhhhcc
Q 042735 600 SPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT----MQTITQQLLFSLVYFSY 664 (667)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt----~~ev~~~l~~~~~~~~~ 664 (667)
.....+.+.....+.. ......+.+++.+||+.+|++||| ++|++.+.||....|+.
T Consensus 239 ------~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 239 ------ETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred ------HHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhh
Confidence 0011111111111111 012235778888999999999999 99999999988776654
No 279
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=3.4e-29 Score=256.64 Aligned_cols=232 Identities=23% Similarity=0.358 Sum_probs=157.3
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc---CCCCeeEEEEEEEe-----
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI---RHRNIVKFYGFCSH----- 492 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~g~~~~----- 492 (667)
+|+..+.||+|+||.||+|+.. +++.+|+|.+....... .....+.+|++++.++ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 3677889999999999999764 57889999876532211 1123456677776655 79999999998864
Q ss_pred CCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
....++||||+++ +|.+++.... ...|.||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 3457899999985 7776664311 112349999999999999999999999987
Q ss_pred ccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-----------hh-
Q 042735 547 LKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-----------RL- 608 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-----------~~- 608 (667)
..... ..+...||+.|+||| ++.++|||||||++|||++|++||............... ..
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 158 YSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred ccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 64322 223457899999999 567899999999999999999997532110000000000 00
Q ss_pred --ccccCCCCCCCCCch-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 609 --DEMLDPRLPPPSPDV-QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 609 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+..+.+.... ......+.+++.+|++.||++|||+.|++.+.||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000000000000000 0112245688889999999999999999988775
No 280
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=5.2e-29 Score=255.26 Aligned_cols=225 Identities=25% Similarity=0.376 Sum_probs=163.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~l 498 (667)
++|+..+.||+|+||.||++.. .++..+|+|++...... .....+.+|+.++.++. |||||+++|++..++..++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3555667899999999999976 45788999987643221 34567899999999997 9999999999999999999
Q ss_pred EEEecCCCChHH---Hh---------------------------ccccCCcccccccCCeeecCCCceEEeccccccccc
Q 042735 499 IYEYLKRGSLAT---NL---------------------------SNDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 499 v~ey~~~g~L~~---~l---------------------------~~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
+|||+.. ++.+ .+ +......|.||||+||+++.++.+||+|||+++...
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9999874 3322 11 111123355999999999999999999999998654
Q ss_pred CCCCCcccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc---CCCC
Q 042735 549 PDSSNWSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML---DPRL 616 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 616 (667)
.... .....||+.|+||| ++.++|||||||++|||++|+.||..... .... ..... .+.+
T Consensus 160 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~-~~~~~~~~~~~~ 231 (288)
T cd06616 160 DSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS------VFDQ-LTQVVKGDPPIL 231 (288)
T ss_pred cCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch------HHHH-HhhhcCCCCCcC
Confidence 3221 23346899999999 34579999999999999999999753221 0000 11111 1122
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+.... ......+.+++.+||+.+|++|||++||+++.++..
T Consensus 232 ~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 SNSEE--REFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred CCcCC--CccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 11110 112335778889999999999999999999988854
No 281
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=2.3e-28 Score=246.49 Aligned_cols=219 Identities=25% Similarity=0.454 Sum_probs=163.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|...++..+|+|.+... ....+.|.+|++++++++|+||+++++++.+ ...+++|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 467788999999999999999877788999987542 1234578999999999999999999999987 7789999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+||+|||.++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 99999999988764211 112399999999999999999999999865432211
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....++..|+|||+ +.++|||||||++||++| |+.||..... ...... ... +...+.. . ..
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----~~~~~~-~~~--~~~~~~~-~---~~ 228 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN----PEVIRA-LER--GYRMPRP-E---NC 228 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH----HHHHHH-HhC--CCCCCCc-c---cC
Confidence 122345678999993 568999999999999999 8988753221 111110 111 1111111 1 11
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.+++.+||+.+|++||++.++.+.|.
T Consensus 229 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 229 PEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 235678888999999999999999998875
No 282
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=247.30 Aligned_cols=231 Identities=21% Similarity=0.300 Sum_probs=177.2
Q ss_pred HcCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+++|+|.||+|-.++ ..+++.+|+|++++.+.... .....-..|-+++.+.+||.+..+.-.|...+.++.
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak-dEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK-DEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh-HHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 4688899999999999999996 46688999999887654332 223456678899999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+.||+|+-+|...... ...|+|.+|.|+|.+|++||+|||+++.--......
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~ 325 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTT 325 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccccccee
Confidence 99999999998777653211 113999999999999999999999999654455566
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
.++||||.|+||| |..++|+|..|||||||+.|+.||...+.. ...... -+-+-+.|......
T Consensus 326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~----kLFeLI--l~ed~kFPr~ls~e----- 394 (516)
T KOG0690|consen 326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE----KLFELI--LMEDLKFPRTLSPE----- 394 (516)
T ss_pred ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh----HHHHHH--HhhhccCCccCCHH-----
Confidence 7899999999999 788999999999999999999998532211 011111 11122333332221
Q ss_pred HHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
...+..--+.+||.+|-- +.||.++-+|..+.|.
T Consensus 395 -AktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 395 -AKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred -HHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 122333568999999943 7899999999988775
No 283
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=3.7e-29 Score=251.70 Aligned_cols=223 Identities=24% Similarity=0.398 Sum_probs=166.1
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... ++..+|+|.+...... ....+.+.+|+.++++++||||+++++++......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP--VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc--chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 4677889999999999999864 5778999987543211 123456889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCC-ceEEecccccccccCCCCC
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~~ 553 (667)
||+++++|.+++..... ..|.|+||+||++++++ .+||+|||.+.........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~ 158 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL 158 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc
Confidence 99999999887754211 11339999999999875 5699999999876544333
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....|++.|+||| ++.++|||||||++|||++|+.|+..... .... ........+...+. ..
T Consensus 159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~----~~~~~~~~~~~~~~---~~ 227 (257)
T cd08225 159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL----HQLV----LKICQGYFAPISPN---FS 227 (257)
T ss_pred ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHH----HHHhcccCCCCCCC---CC
Confidence 33456899999999 35689999999999999999999753221 0111 11111111111111 11
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.+++.+||+.+|++|||+.|++++.|+
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 228 RDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 246678889999999999999999988764
No 284
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=2e-28 Score=256.43 Aligned_cols=224 Identities=23% Similarity=0.374 Sum_probs=164.0
Q ss_pred CCcCcceeecccCeEEEEEEeCC--------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH 492 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~ 492 (667)
+|...+.||+|+||.||+|+... ...+|+|.+.... .....+++.+|+++++++ +||||+++++++..
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 57788899999999999996421 2368999876432 123356799999999999 79999999999999
Q ss_pred CCceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeecC
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLDL 532 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld~ 532 (667)
.+..+++|||+++|+|.+++..... ..|.||||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 9999999999999999988753210 112399999999999
Q ss_pred CCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhh
Q 042735 533 EHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSV 603 (667)
Q Consensus 533 ~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 603 (667)
++.+||+|||+++........ .....++..|+||| ++.++|||||||++|||++ |+.||..... ...
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~ 245 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----EEL 245 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH----HHH
Confidence 999999999999865432211 12233456899999 4678999999999999998 8888643211 111
Q ss_pred hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 604 INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.... ........+. .....+.+++.+||+.+|++||||.|+++.+....
T Consensus 246 ~~~~-~~~~~~~~~~------~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 246 FKLL-KEGHRMDKPA------NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHH-HcCCCCCCCC------CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 1111 0101111111 11235668889999999999999999999987654
No 285
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=2.7e-28 Score=248.72 Aligned_cols=223 Identities=25% Similarity=0.441 Sum_probs=163.9
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-Cc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.+|...+.||+|+||.||+|.... +. .+|+|....... ......+.+|+.++++++||||++++|++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 467788899999999999998643 32 588888764322 2344678999999999999999999999987 78
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 8999999999999988764311 113499999999999999999999999876543
Q ss_pred CCCcc--cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SSNWS--ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~~~~--~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
..... ...++..|+||| ++.++|||||||++||++| |+.||..... .... ..... ....+.+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~-~~~~~--~~~~~~~~- 234 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----VEIP-DLLEK--GERLPQPP- 234 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH----HHHH-HHHhC--CCCCCCCC-
Confidence 32211 122457899999 3568999999999999999 9999763221 1111 11111 01111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. ....+.+++.+||..+|.+|||+.++++.+...
T Consensus 235 ~---~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 235 I---CTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred C---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 123466788899999999999999999988764
No 286
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=2.7e-28 Score=247.50 Aligned_cols=224 Identities=25% Similarity=0.396 Sum_probs=162.7
Q ss_pred cCCcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|...+.||+|+||.||+|...+ ...+|||....... ....+.|.+|+.++++++||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 356778899999999999997643 24688888754321 2334679999999999999999999999875 457
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 899999999999988754211 1123999999999999999999999998764332
Q ss_pred CC-cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 SN-WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~~-~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. .+...++..|+||| ++.++|||||||++||+++ |+.||...... ... ...........+. .
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~-~~~~~~~~~~~~~---~- 232 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN----DVI-GRIENGERLPMPP---N- 232 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH----HHH-HHHHcCCcCCCCC---C-
Confidence 11 12233456899999 4578999999999999996 99997533211 111 1111111111111 1
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||..+|++|||+.++++.+....
T Consensus 233 --~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 233 --CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred --CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1225667888999999999999999999987643
No 287
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=1e-28 Score=250.17 Aligned_cols=229 Identities=24% Similarity=0.410 Sum_probs=167.7
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC--chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS--DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+|+..+.||+|+||.||+|.. .++..+|+|++...... .+....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467788999999999999975 56788999987643321 112234678999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC-ceEEecccccccccCCCC-
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~- 552 (667)
||||+++++|.+.+..... ..|.||||+||+++.++ .+||+|||+++.......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 9999999999887754221 11349999999998776 599999999987653311
Q ss_pred ---CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 553 ---NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 553 ---~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
......||..|+||| ++.++||||+|+++|||++|+.|+.......... ...........+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 234 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPE----- 234 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCch-----
Confidence 122356889999999 4678999999999999999999985332111100 0000000001111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+.+++.+|+..+|++|||+.|++++.+|
T Consensus 235 -~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 235 -HLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred -hhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence 112356678889999999999999999988775
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=8.8e-29 Score=255.73 Aligned_cols=229 Identities=22% Similarity=0.271 Sum_probs=165.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... .++.||+|.+..... ......+.+.+|+++++.++||||+++++.+..++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 36888899999999999999864 467899998764321 1122345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC----
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS---- 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~---- 551 (667)
|||+++|+|.+++..... ..|.||||+||+++.++.+|++|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 999999999988754221 1134999999999999999999999987421100
Q ss_pred -----------CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 552 -----------SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 552 -----------~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
.......|+..|+|||+ +.++|||||||++|||+||+.||..... .......... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~----~~~~~~~~~~--~~ 233 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----EELFGQVISD--DI 233 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhc--cc
Confidence 01123467889999993 5689999999999999999999752211 1111111111 00
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHHHHhh
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT---MQTITQQLLFSL 659 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt---~~ev~~~l~~~~ 659 (667)
..+.... .....+.+++.+||+.+|++||+ +.+++++.|+..
T Consensus 234 ~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 234 EWPEGDE---ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred CCCCccc---cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 1111111 11224668888999999999998 688888887744
No 289
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=4.6e-29 Score=255.54 Aligned_cols=234 Identities=24% Similarity=0.375 Sum_probs=166.3
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... ++..+|||++...... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD--EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc--ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 5788889999999999999875 5778999987643221 123457899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-Ccc
Q 042735 501 EYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~~ 555 (667)
||++++.+........ ...|.|++|+||++++++.+||+|||+++....... ...
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 9999887765443211 112349999999999999999999999987654432 234
Q ss_pred cccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCC----------C-Chhhh-hhhhccccCC-C
Q 042735 556 ALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSIL----------P-SPSVI-NMRLDEMLDP-R 615 (667)
Q Consensus 556 ~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~----------~-~~~~~-~~~~~~~~~~-~ 615 (667)
...|+..|+|||+ +.++||||||+++|||++|+.||....... . .+... .......... .
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 4678899999993 468999999999999999999875321100 0 00000 0000000000 0
Q ss_pred CCCCC-Cch------HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 616 LPPPS-PDV------QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 616 ~~~~~-~~~------~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+... ... .....++.+++.+||..+|++|||+++++++.||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00000 000 0012457789999999999999999999987664
No 290
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=4.4e-29 Score=255.07 Aligned_cols=232 Identities=21% Similarity=0.272 Sum_probs=163.0
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|++|.||+|.. .++..+|+|++...... ....+.+.+|++++++++|||++++++++.+++..+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 45678899999999999976 46889999987643221 1223468899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|++ ++|.+++.... ...|.|++|+||+++.++.+||+|||+++..........
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence 995 68887765432 011349999999999999999999999986543322233
Q ss_pred cccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhc---ccc--C
Q 042735 556 ALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLD---EML--D 613 (667)
Q Consensus 556 ~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~---~~~--~ 613 (667)
...+++.|+|||+ +.++|||||||++|||+||+.||............... ... +.. -
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 3467899999993 45799999999999999999997532211000000000 000 000 0
Q ss_pred CCCCCCC--CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 614 PRLPPPS--PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 614 ~~~~~~~--~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+...... .........+.+++.+||+.+|++|||++|++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0000000 0000111356788999999999999999999988664
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=9.6e-29 Score=252.55 Aligned_cols=228 Identities=22% Similarity=0.361 Sum_probs=165.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHH-HHhcCCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEA-LTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
++|+..+.||+|+||.||+|... ++..||+|++...... .....+..|+.+ ++..+|||||++++++...+..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence 47888899999999999999864 6889999988654321 223456667765 566789999999999999999999
Q ss_pred EEEecCCCChHHHhccc----------------------------c-CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 499 IYEYLKRGSLATNLSND----------------------------A-AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~----------------------------~-~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
||||++ |+|.+.+... . ...|.||||+||+++.++.+||+|||+++....
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 999997 5665544320 0 122449999999999999999999999986543
Q ss_pred CCCCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 550 DSSNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.. ..+...|+..|+|||+ +.++|||||||++|||++|+.|+..... ... ...... ....+..+..
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~-~~~~~~-~~~~~~~~~~ 231 (283)
T cd06617 157 SV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQ-QLKQVV-EEPSPQLPAE 231 (283)
T ss_pred cc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHH-HHHHHH-hcCCCCCCcc
Confidence 21 2233568999999993 4579999999999999999999752211 000 000000 1111222111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
. ....+.+++.+||..+|++||++++++++.|+.....
T Consensus 232 --~---~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 232 --K---FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred --c---cCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 1 1224677888999999999999999999999876553
No 292
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=8.9e-29 Score=264.42 Aligned_cols=230 Identities=20% Similarity=0.236 Sum_probs=163.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.+|...+.||+|+||.||+|... .+..+|||.+... +.+.+|++++++++|||||++++++......+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 46888999999999999999753 3467888876432 23568999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~- 552 (667)
+||||+. ++|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 163 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~ 241 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT 241 (392)
T ss_pred EEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc
Confidence 9999996 57776663221 122459999999999999999999999976543321
Q ss_pred -CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh--------------------
Q 042735 553 -NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN-------------------- 605 (667)
Q Consensus 553 -~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~-------------------- 605 (667)
......||+.|+||| |+.++|||||||++|||++|+.||..............
T Consensus 242 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 321 (392)
T PHA03207 242 PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL 321 (392)
T ss_pred ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence 123467999999999 56789999999999999999999743221100000000
Q ss_pred -hh---hccccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 606 -MR---LDEMLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 606 -~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.. ......+....+... .......+.+++.+||..+|++|||+.|++.+.||...
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 00 000000101000000 00112345678889999999999999999999999754
No 293
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-29 Score=251.24 Aligned_cols=224 Identities=21% Similarity=0.327 Sum_probs=178.3
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|.|++|-.|++ =.|..||||++.+... +.....++++|++.|+-+.|||||++|.+...+..+|+|.|
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl--D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL--DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc--chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 56667899999999999975 4688999999977543 23445678999999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc--CC-----------------------cccccccCCeee-cCCCceEEecccccccccCCCCCcc
Q 042735 502 YLKRGSLATNLSNDA--AA-----------------------EELDISSKNVLL-DLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~--~~-----------------------~~~dlk~~NiLl-d~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
.-++|+|++++..+. .. .|.||||+||.+ ..-|-+|+.|||++-.+.+.. ..+
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~-kL~ 176 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK-KLT 176 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc-hhh
Confidence 999999999986542 11 134999999876 567899999999998776654 457
Q ss_pred cccccccccCCC------CC-CCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------YR-KKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~-~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
++||+..|-||| |+ +++||||+|||||.|+.|++||....+- ..+..++|.....|.. ...
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS--------ETLTmImDCKYtvPsh----vS~ 244 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS--------ETLTMIMDCKYTVPSH----VSK 244 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--------hhhhhhhcccccCchh----hhH
Confidence 799999999999 54 5899999999999999999998744321 1233455655443322 123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
++.+++..++..||.+|.+.+||+...|...+.
T Consensus 245 eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 245 ECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred HHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 466788899999999999999999988876543
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=4.3e-29 Score=256.54 Aligned_cols=234 Identities=21% Similarity=0.259 Sum_probs=164.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~ 496 (667)
.++|+..+.||+|+||.||+|... ++..+|+|+++..... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 457888899999999999999875 5788999988643221 12234577899999999999999999999877 889
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++ +|.+.+..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999999984 88776643211 1234999999999999999999999998765433
Q ss_pred CCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh-------------------
Q 042735 552 SNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN------------------- 605 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~------------------- 605 (667)
.......+++.|+|||+ +.++|||||||++|||++|+.||..............
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA 240 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence 33344568899999993 4579999999999999999999753221100000000
Q ss_pred --hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 606 --MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 606 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..........+....+.. .....+.+++.+||+.+|++|||+.|++.+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 241 KKKTFTKYPYNQLRKKFPAL-SLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cccccccccchhhhcccccc-CCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 000000000000000000 012245678889999999999999999988664
No 295
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-29 Score=249.89 Aligned_cols=232 Identities=26% Similarity=0.453 Sum_probs=170.1
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHH--hcCCCCeeEEEEEEEeCC----c
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALT--KIRHRNIVKFYGFCSHAR----H 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~~~g~~~~~~----~ 495 (667)
.....++||+|+||.||+|.+.+ +.||||++.. .+.+.|..|-+|.+ .++|+||++|+++-.... +
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-ceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 34455678999999999999855 7899999863 34567888888766 678999999999877655 8
Q ss_pred eEEEEEecCCCChHHHhcccc--------------------------------CCcccccccCCeeecCCCceEEecccc
Q 042735 496 SILIYEYLKRGSLATNLSNDA--------------------------------AAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~--------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
++||+||-++|+|.++|.... ...|+|||++|||+..|++.-|+|||+
T Consensus 283 ywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999998875321 223569999999999999999999999
Q ss_pred cccccCCCCC--cccccccccccCCCC-------C-----CCchHHHHHHHHHHHHhCCCCC--C--------CCccCCC
Q 042735 544 AKFLKPDSSN--WSALVGTYRYVAPDY-------R-----KKCDVYSFRVLALEVIKGKHPR--G--------FVSSILP 599 (667)
Q Consensus 544 a~~~~~~~~~--~~~~~Gt~~y~aPE~-------~-----~~~DV~sfGvvl~ElltG~~p~--~--------~~~~~~~ 599 (667)
|..+.++... ....+||.+|||||. . .+.||||+|.|||||+++..-. + +...+..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9987754322 233689999999993 1 2579999999999999875322 1 0111111
Q ss_pred Chhhhh---hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 600 SPSVIN---MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 600 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
.+...+ ..+++...|.++...... ..+..+.+.+..||+.||+.|-|++=|.++.+......
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 222222 223333445555443332 34566778888999999999999998888877665443
No 296
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.96 E-value=2.5e-28 Score=252.03 Aligned_cols=223 Identities=22% Similarity=0.429 Sum_probs=161.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.+|+..+.||+|+||.||+|... ++. .+|+|.+..... .....++.+|+.++++++||||++++|++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 46778889999999999999753 343 468887654321 22334689999999999999999999998764 4
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++++||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 678999999999988775421 1123499999999999999999999999876533
Q ss_pred CCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
... .....++..|+||| ++.++|||||||++|||+| |+.||..... ..... .... ....+.+ +
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~--~~~~~~~-~ 234 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT----REIPD-LLEK--GERLPQP-P 234 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHC--CCCCCCC-C
Confidence 221 12234577899999 3568999999999999998 8888753210 11111 1111 1111111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.....+.+++.+||..+|++||+++++++.+...
T Consensus 235 ---~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 235 ---ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1123567888899999999999999999987764
No 297
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=7.8e-29 Score=254.74 Aligned_cols=238 Identities=22% Similarity=0.297 Sum_probs=166.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|++|.||+|... +++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED--EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc--ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 57888899999999999999864 6788999987543221 12235688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc--------------------------CCcccccccCCeeecC-CCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDL-EHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~-~~~~kl~DFGla~~~~~~~~ 552 (667)
|||++ +++.+.+.... ...|.||||+||+++. ++.+||+|||+++.......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 99996 46765553211 1123499999999985 56799999999986543333
Q ss_pred CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh---hccc-----------
Q 042735 553 NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR---LDEM----------- 611 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~---~~~~----------- 611 (667)
..+...|++.|+|||+ +.++|||||||++|||+||+.||................ ....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 3344568899999993 457999999999999999999985322100000000000 0000
Q ss_pred -cCCCCCCCCC--chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 -LDPRLPPPSP--DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 -~~~~~~~~~~--~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+..+.... ........+.+++.+|++.+|++||++.+++++.||..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 0000000000 0001122466788899999999999999999999987654
No 298
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=1.8e-28 Score=248.50 Aligned_cols=215 Identities=26% Similarity=0.453 Sum_probs=156.7
Q ss_pred eeecccCeEEEEEEeCC-------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 428 CIGSGRHGSVYRAELPS-------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~-------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.||+|+||.||+|...+ +..+|+|.+..... ......|.+|+.++++++||||++++|++...+..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT---DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc---hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 58999999999997643 24688898754321 123457899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------------CcccccccCCeeecCCC-----ceEEeccccc
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------------AEELDISSKNVLLDLEH-----KAHVSDFGIA 544 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------------~~~~dlk~~NiLld~~~-----~~kl~DFGla 544 (667)
||+++|+|.+++..... ..|.|+||+||+++.++ .+|++|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 99999999988753210 11239999999999877 8999999999
Q ss_pred ccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 545 KFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 545 ~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
+....... ......++..|+||| ++.++|||||||++|||+| |+.||..... .... ..... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~----~~~~-~~~~~--~~~ 231 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN----QEVL-QHVTA--GGR 231 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----HHHH-HHHhc--CCc
Confidence 86533211 112234578899999 3678999999999999998 9999753221 0100 00000 011
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+ .. ....+.+++.+||+.+|++||++.+|.+.|.
T Consensus 232 ~~~~-~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 232 LQKP-EN---CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cCCc-cc---chHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111 11 1235678889999999999999999998875
No 299
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.1e-28 Score=253.03 Aligned_cols=235 Identities=23% Similarity=0.328 Sum_probs=171.2
Q ss_pred CCcCcceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCce
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~ 496 (667)
+|+..+.||+|+||.||+|+. .++..+|+|.+............+.+.+|++++.+++ ||||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778899999999999975 3678899998864322222233456889999999995 99999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC-
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS- 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~- 551 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 999999999999887753211 1134999999999999999999999998654322
Q ss_pred CCcccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 SNWSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.......|+..|+|||+ +.++|||||||++|||+||+.|+............. ........+.+ ..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~-~~- 234 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEIS----RRILKSEPPYP-QE- 234 (290)
T ss_pred cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHH----HHhhccCCCCC-cc-
Confidence 12234578999999993 357999999999999999999986322111111111 11111111111 11
Q ss_pred HHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhcc
Q 042735 624 QGKLISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFSY 664 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~~ 664 (667)
....+.+++.+||+.+|++|| ++++++.+.++....|++
T Consensus 235 --~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~ 278 (290)
T cd05613 235 --MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDD 278 (290)
T ss_pred --CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence 112456788899999999997 889999998887766543
No 300
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=2.5e-28 Score=249.55 Aligned_cols=232 Identities=20% Similarity=0.321 Sum_probs=164.4
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|+.. ++..+|||++...... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 4778889999999999999874 5788999988653221 12345778999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc---------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 501 EYLKRGSLATNLSNDA---------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~---------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||+++ +|.+++.... ...|.|+||+||++++++.+|++|||+++........
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 99995 7776654321 0113399999999999999999999999865433222
Q ss_pred cccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh----------hhhc--cccCC
Q 042735 554 WSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN----------MRLD--EMLDP 614 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~----------~~~~--~~~~~ 614 (667)
.....+|+.|+|||+ +.++|||||||++|||+||+.||.............. .... .....
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 334567899999992 5679999999999999999999863321100000000 0000 00001
Q ss_pred CCCCCCCchH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 615 RLPPPSPDVQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 615 ~~~~~~~~~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+....... .....+.+++.+|++.+|++||++.|++++.||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1111100000 112346688889999999999999999987664
No 301
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=2.5e-28 Score=248.90 Aligned_cols=224 Identities=20% Similarity=0.250 Sum_probs=159.5
Q ss_pred eeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHH---HHhcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 428 CIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEA---LTKIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~---l~~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.||+|+||.||+|.. .++..+|+|.+........ .....+.+|..+ +...+||||+.+++++..++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc-hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 479999999999986 4578899998764332211 112234445443 33457999999999999999999999999
Q ss_pred CCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 504 KRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 504 ~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
++|+|.+++.... ...|.||||+||+++.++.+|++|||++....... .....|
T Consensus 80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 157 (279)
T cd05633 80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVG 157 (279)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCC
Confidence 9999987765321 11244999999999999999999999997543222 233579
Q ss_pred cccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 560 TYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 560 t~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
|+.|+||| ++.++|||||||++|||+||+.||...... ........ ....+..++... ...+.+
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~-~~~~~~~~~~~~------~~~~~~ 228 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRM-TLTVNVELPDSF------SPELKS 228 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CHHHHHHH-hhcCCcCCcccc------CHHHHH
Confidence 99999999 345789999999999999999998532211 11111110 011122222211 124567
Q ss_pred HHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 633 VAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 633 ~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
++.+||..+|++|| |++|++++.||....|.
T Consensus 229 li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~ 264 (279)
T cd05633 229 LLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQ 264 (279)
T ss_pred HHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHh
Confidence 78899999999999 69999999999876543
No 302
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=2.8e-28 Score=245.16 Aligned_cols=221 Identities=20% Similarity=0.361 Sum_probs=164.6
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|.. .++..+|||.+...... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT--KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc--cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 467788999999999999976 46778999988643222 233567999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCC-CceEEecccccccccCCCCC
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLE-HKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~-~~~kl~DFGla~~~~~~~~~ 553 (667)
||+++++|.+++..... ..|.||||+||+++.+ +.+|++|||+++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~- 157 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK- 157 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-
Confidence 99999999888754211 1123999999999854 5689999999987653322
Q ss_pred cccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....|+..|+|||+ +.++|||||||++|||++|+.|+..... ........... ....+.. ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~------~~ 226 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL----PALVLKIMSGT-FAPISDR------YS 226 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch----HHHHHHHHhcC-CCCCCCC------cC
Confidence 233568999999993 5689999999999999999999753221 11111111110 0111111 12
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
..+.+++.+||+.+|++|||+.|++++.+
T Consensus 227 ~~l~~li~~~l~~~p~~Rpt~~~ll~~p~ 255 (256)
T cd08220 227 PDLRQLILSMLNLDPSKRPQLSQIMAQPI 255 (256)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhhCCC
Confidence 24667888999999999999999998754
No 303
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=5.3e-29 Score=266.17 Aligned_cols=231 Identities=23% Similarity=0.390 Sum_probs=176.6
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFC 490 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~ 490 (667)
++.+-..++-|++.++||.|.+|.||+++. +.++..|||+...... ..++...|.++++... |||++.+||++
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-----~deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-----EEEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-----ccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 333444567788999999999999999974 5677888888654322 2345667888888775 99999999999
Q ss_pred Ee-----CCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEe
Q 042735 491 SH-----ARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 491 ~~-----~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~ 539 (667)
.. ++++|+|||||.+||.-+.+..-. ...|.|+|-.|||++.++.||+.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence 64 679999999999999877654311 11244999999999999999999
Q ss_pred cccccccccCCCCCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhh
Q 042735 540 DFGIAKFLKPDSSNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 540 DFGla~~~~~~~~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 608 (667)
|||++..+........+++|||.||||| |+..+|+||+|++..||..|.+|....- + ++.
T Consensus 166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH---P------mra 236 (953)
T KOG0587|consen 166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH---P------MRA 236 (953)
T ss_pred eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc---h------hhh
Confidence 9999998877666667889999999998 6778999999999999999999953211 1 111
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
--.+.+..|+..........++.+++..|+.+|-++||++.+++++.+-
T Consensus 237 LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 237 LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 1111222222223334556688899999999999999999999988654
No 304
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.96 E-value=8.1e-29 Score=242.72 Aligned_cols=237 Identities=22% Similarity=0.327 Sum_probs=169.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC-eeEEEEEEEeCC----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN-IVKFYGFCSHAR---- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~g~~~~~~---- 494 (667)
..|+..+.||+|.||+||+|+. .+|..||+|++....... .......+|+.++.+++|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E--G~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE--GVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccccc--CCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 4455667799999999999974 668899999987543211 12345689999999999999 999999998877
Q ss_pred --ceEEEEEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 495 --HSILIYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 495 --~~~lv~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
..++|+||++. +|.+++.... ...|.||||+|||++++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 78999999874 6655554321 1224599999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC---------Chhhhhh-h
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP---------SPSVINM-R 607 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~---------~~~~~~~-~ 607 (667)
+...-.....+..++|..|-||| |....|+||+|||+.||+++++-|...+.... .+..... .
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 97765555567788999999999 78899999999999999998876543222100 0000000 0
Q ss_pred hccccC--CCCCC---CCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 608 LDEMLD--PRLPP---PSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 608 ~~~~~~--~~~~~---~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+ +..+. +.+- .........+++..|++.+|.+|.|+..++.|.+|...
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 000000 01110 0000 00111356678889999999999999999999888654
No 305
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=9.1e-29 Score=249.14 Aligned_cols=207 Identities=25% Similarity=0.458 Sum_probs=151.4
Q ss_pred eeecccCeEEEEEEeCC-C-------ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 428 CIGSGRHGSVYRAELPS-K-------EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~-~-------~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.||+|+||.||+|.... + ..+|+|.+... .....+.|.+|+.+++.++|||||++++++..++..++|
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 58999999999997532 2 23777765432 223345788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCc--------eEEeccccccc
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHK--------AHVSDFGIAKF 546 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~--------~kl~DFGla~~ 546 (667)
|||+++|+|.+++..... ..|.||||+||+++.++. +|++|||++..
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999988864321 113499999999987765 59999999875
Q ss_pred ccCCCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCC-CCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 547 LKPDSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGK-HPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
... .....|++.|+|||+ +.++|||||||++|||++|. .|+..... ..... .... ...++.
T Consensus 158 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~----~~~~~-~~~~--~~~~~~ 226 (258)
T cd05078 158 VLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS----QKKLQ-FYED--RHQLPA 226 (258)
T ss_pred cCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH----HHHHH-HHHc--cccCCC
Confidence 432 223578899999993 45799999999999999995 55432111 00000 0000 112222
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
.. ..++.+++.+||+.+|++|||++++++.|
T Consensus 227 ~~------~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 227 PK------WTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CC------cHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11 12467888999999999999999999875
No 306
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=1.2e-28 Score=269.64 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=159.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC------CCeeEEEEEEE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH------RNIVKFYGFCS 491 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~~~g~~~ 491 (667)
..++|...+.||+|+||.||+|.. ..++.||||++.... ...+.+..|++++.+++| ++++++++++.
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 457899999999999999999976 457789999985421 122345667777776655 45899999887
Q ss_pred eC-CceEEEEEecCCCChHHHhccc-------------------------cCCcccccccCCeeecCCC-----------
Q 042735 492 HA-RHSILIYEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDLEH----------- 534 (667)
Q Consensus 492 ~~-~~~~lv~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~----------- 534 (667)
.. ...++||||+ +++|.+++... ....|.||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 65 4688999987 56776654321 1234569999999998765
Q ss_pred -----ceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC----
Q 042735 535 -----KAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP---- 599 (667)
Q Consensus 535 -----~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~---- 599 (667)
.+||+|||.+.... ...+..+||+.||||| |+.++|||||||++|||+||+.||........
T Consensus 281 ~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred CCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 49999999886432 2234578999999999 57789999999999999999999863221100
Q ss_pred ------Chhhhhh-----hhcccc------CCCCCCC--------C-CchHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042735 600 ------SPSVINM-----RLDEML------DPRLPPP--------S-PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQ 653 (667)
Q Consensus 600 ------~~~~~~~-----~~~~~~------~~~~~~~--------~-~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~ 653 (667)
.+..... ....+. .+...+. . ......-..+.+++.+||+.||++|||++|+++
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0000000 000000 0000000 0 000001124668999999999999999999999
Q ss_pred HHHHhhhhh
Q 042735 654 QLLFSLVYF 662 (667)
Q Consensus 654 ~l~~~~~~~ 662 (667)
|.|+...+.
T Consensus 438 Hp~~~~~~~ 446 (467)
T PTZ00284 438 HPYVLKYYP 446 (467)
T ss_pred CccccccCC
Confidence 999976543
No 307
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.5e-28 Score=259.38 Aligned_cols=228 Identities=17% Similarity=0.230 Sum_probs=158.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
..+|...+.||+|+||.||+|... .+..||+|..... ....|+.++++++|||||++++++.+....++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 357999999999999999999875 4667888874321 23468999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+. |+|.+++.... ...|.||||+|||++.++.+||+|||+++..... ..
T Consensus 135 v~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~ 212 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PA 212 (357)
T ss_pred EEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-cc
Confidence 999996 57777664321 1123499999999999999999999999854322 22
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCC-CCCccCCCCh-hhhhhhhcc------ccCCCCCC-
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPR-GFVSSILPSP-SVINMRLDE------MLDPRLPP- 618 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~-~~~~~~~~~~-~~~~~~~~~------~~~~~~~~- 618 (667)
.....||+.|+||| |+.++|||||||++|||+++..|+ .......... ......+.. .....++.
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 23467999999999 467899999999999999976553 2110000000 000000000 00000000
Q ss_pred ------------------CCCc--h---HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 619 ------------------PSPD--V---QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 619 ------------------~~~~--~---~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+... . ........+++.+||+.||++|||+.|++++.||..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0000 0 001123445788999999999999999999999853
No 308
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=4.3e-28 Score=251.93 Aligned_cols=221 Identities=24% Similarity=0.371 Sum_probs=162.4
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|.. .++..+|+|++...... .....+.+.+|++++++++|||+|++++++.+.+..++|||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 55677899999999999986 45788999987643221 22334578899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|+++ ++.+.+.... ...|.||+|+||+++.++.+||+|||++...... ..
T Consensus 106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~ 180 (317)
T cd06635 106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----NS 180 (317)
T ss_pred CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----cc
Confidence 9974 6665543211 1123499999999999999999999998764432 24
Q ss_pred ccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..|++.|+|||+ +.++|||||||++|||++|+.|+...... .... .......+..... ...
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~----~~~~~~~~~~~~~--~~~ 250 (317)
T cd06635 181 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALY----HIAQNESPTLQSN--EWS 250 (317)
T ss_pred ccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHH----HHHhccCCCCCCc--ccc
Confidence 578999999994 34789999999999999999997532110 0000 1111111111111 112
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|.+||++.+|++++++..
T Consensus 251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 251 DYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 24677888999999999999999999987653
No 309
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=6.5e-28 Score=245.32 Aligned_cols=223 Identities=25% Similarity=0.400 Sum_probs=163.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|+..+.||+|+||.||+|+.. ....+++|.+.... .....+.|.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 46788899999999999999853 23568888765421 1223467999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc---------C------------------------CcccccccCCeeecCCCceEEecc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA---------A------------------------AEELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~---------~------------------------~~~~dlk~~NiLld~~~~~kl~DF 541 (667)
..++||||+++|+|.+++.... . ..|.||||+||+++.++.+|++||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999998875432 0 012399999999999999999999
Q ss_pred cccccccCCC-CCcccccccccccCCCC------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccC
Q 042735 542 GIAKFLKPDS-SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 542 Gla~~~~~~~-~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 613 (667)
|+++...... .......++..|+|||+ ..++|||||||++|||++ |..||..... .............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----~~~~~~~~~~~~~ 237 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----EEVLNRLQAGKLE 237 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch----HHHHHHHHcCCcC
Confidence 9987543221 11233456788999993 457999999999999999 7778743211 1111111000111
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
...+.. ....+.+++.+||+.+|++|||+.|+++.+.
T Consensus 238 ~~~~~~------~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 LPVPEG------CPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCC------CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111111 1125678888999999999999999998864
No 310
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=4.3e-28 Score=243.59 Aligned_cols=215 Identities=25% Similarity=0.439 Sum_probs=159.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|.. .+..+|+|++.... ..+.+.+|+.++++++|||++++++++... ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 5678889999999999999975 56679999875421 235688999999999999999999998764 478999
Q ss_pred EecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+++|+|.+++..... ..|.|+||+||+++.++.+||+|||+++..... .
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---~ 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---V 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---C
Confidence 99999999988754321 113399999999999999999999999764322 1
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....+..|+||| ++.++|||||||++|||++ |+.||..... ..... .......+..+ . ...
T Consensus 155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~---~---~~~ 223 (254)
T cd05083 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL----KEVKE-CVEKGYRMEPP---E---GCP 223 (254)
T ss_pred CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH----HHHHH-HHhCCCCCCCC---C---cCC
Confidence 2233456899999 3568999999999999998 9988753221 11111 11111111111 1 112
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.+++.+||+.+|++||+++++++.+..
T Consensus 224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 224 ADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 356788899999999999999999988753
No 311
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1.5e-28 Score=251.56 Aligned_cols=233 Identities=21% Similarity=0.321 Sum_probs=166.7
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|...+.||+|+||.||+|.. .++..+|||++....... ...+.+.+|+.++++++||||+++++++..+...++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG--GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc--hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 466778899999999999986 467889999886543211 23457899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
||+ +++|.+.+.... ...|.||||+||+++.++.+||+|||+++....... ..
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 999 999988764321 112349999999999999999999999987654321 23
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh----------hhhh------ccc
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI----------NMRL------DEM 611 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~----------~~~~------~~~ 611 (667)
....|+..|+|||+ +.++||||+||++|||+||++|+............. .... ..+
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 34578999999993 568999999999999999987764321100000000 0000 000
Q ss_pred cCCCCCC-CCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 612 LDPRLPP-PSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 612 ~~~~~~~-~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.... +... .......+.+++.+|++.+|++|||+++++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0000000 0000 00112456788899999999999999999999876
No 312
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=3.4e-28 Score=243.52 Aligned_cols=221 Identities=26% Similarity=0.427 Sum_probs=167.5
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|... ++..+++|++..... ...+.+.+|++.+++++|||++++++++......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4677889999999999999875 678899999865322 24567899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc--C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSNDA--A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
||+++++|.+.+.... . ..|.|++|+||+++.++.+||+|||.+........ ..
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~ 155 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RN 155 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-cc
Confidence 9999999998775431 0 11239999999999999999999999987654432 23
Q ss_pred cccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...|+..|+|||+ +.++||||||+++|||++|+.|+...... ...... .....+..+... .....
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~--~~~~~~~~~~~~----~~~~~ 226 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKI--ATNGPPGLRNPE----KWSDE 226 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHH--HhcCCCCcCccc----ccCHH
Confidence 4678999999993 67899999999999999999997633210 000000 011111111111 01234
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
+.+++.+||+.+|++|||+.|++++.|
T Consensus 227 ~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 227 FKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 677888999999999999999998643
No 313
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=3e-28 Score=245.35 Aligned_cols=206 Identities=25% Similarity=0.424 Sum_probs=151.3
Q ss_pred ceeecccCeEEEEEEeCCCc-----------eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 427 YCIGSGRHGSVYRAELPSKE-----------FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~-----------~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
+.||+|+||.||+|...... .+++|.+.... . ....|.+|+.++++++||||++++|++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----R-DSLAFFETASLMSQLSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----h-hHHHHHHHHHHHHcCCCcchhheeeEEec-CC
Confidence 35899999999999875433 36666654321 1 14678999999999999999999999988 77
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCC-------ceEEecccc
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEH-------KAHVSDFGI 543 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~-------~~kl~DFGl 543 (667)
.++||||+++|+|.+++..... ..|.||||+||+++.++ .+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 8999999999999988754321 12349999999999888 799999999
Q ss_pred cccccCCCCCcccccccccccCCCC--------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
++.... .....++..|+|||+ +.++|||||||++|||++ |..|+..... ..... .. . ...
T Consensus 155 a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~---~~~~~--~~-~-~~~ 223 (259)
T cd05037 155 PITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS---SEKER--FY-Q-DQH 223 (259)
T ss_pred cccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc---hhHHH--HH-h-cCC
Confidence 986543 123457788999994 347999999999999999 4666643221 00000 00 0 011
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..+.+.. ..+.+++.+||..+|++|||+.||++.|
T Consensus 224 ~~~~~~~------~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 224 RLPMPDC------AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCCCCc------hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1111111 3567888999999999999999999876
No 314
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=7.7e-28 Score=242.10 Aligned_cols=219 Identities=27% Similarity=0.459 Sum_probs=161.3
Q ss_pred CcCcceeecccCeEEEEEEeCC-----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS-----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
|+..+.||+|+||.||+|.... +..+|+|++..... ....+.+.+|++.+.+++||||+++++++.+.+..+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 3456789999999999998654 37799999864322 113567999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC---C-----------------------cccccccCCeeecCCCceEEecccccccccCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAA---A-----------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~---~-----------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++|||+++++|.+++..... . .|.||||+||+++.++.+||+|||+++......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999999887754221 1 123999999999999999999999998765432
Q ss_pred CCcc-cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 SNWS-ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~~~~-~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.... ...+++.|+||| ++.++||||+|+++|||++ |+.|+.... ....... .........+. .
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~----~~~~~~~-~~~~~~~~~~~---~- 228 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS----NEEVLEY-LKKGYRLPKPE---N- 228 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHH-HhcCCCCCCCC---c-
Confidence 2111 133778999999 4678999999999999999 778865311 1111111 00100011111 1
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
....+.+++.+|+..+|++|||+.|+++.+
T Consensus 229 --~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 229 --CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 123567788899999999999999998753
No 315
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=248.26 Aligned_cols=232 Identities=22% Similarity=0.318 Sum_probs=173.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~l 498 (667)
.||....+||+|+||.|..|+.+ +.+.+|||++++.+..++ .+.+.-+.|-++|+-- +-|.+|+++.++...+.+|.
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-CcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 58999999999999999999765 467899999987654333 2334455677777654 47999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+.||+|..+++.-. .....|||.+||++|.+|++||+|||+++.---+....
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT 507 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT 507 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence 999999999987775321 11123999999999999999999999999765556667
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
.++||||.|+||| |...+|+|||||+||||+.|++||+..+.. .....+.+.....+..-..
T Consensus 508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--------elF~aI~ehnvsyPKslSk---- 575 (683)
T KOG0696|consen 508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQAIMEHNVSYPKSLSK---- 575 (683)
T ss_pred eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHccCcCcccccH----
Confidence 7899999999999 678999999999999999999999754421 1122223322222221111
Q ss_pred HHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhccC
Q 042735 629 SIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFSYA 665 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~~~ 665 (667)
+.+.+...-+.+.|.+|-- -++|..|.+|..+.|+++
T Consensus 576 EAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~ 617 (683)
T KOG0696|consen 576 EAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL 617 (683)
T ss_pred HHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence 2334445567888998844 367888888887777643
No 316
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=1.9e-28 Score=253.73 Aligned_cols=241 Identities=24% Similarity=0.283 Sum_probs=166.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~ 496 (667)
.++|+..+.||+|+||.||+|.. .+++.||+|++....... .....+.+|++++++++||||+++++++.+. +..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46889999999999999999986 458889999875432211 1123467899999999999999999998765 468
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999999975 6766554311 11234999999999999999999999998765433
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-------h---hccc---
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-------R---LDEM--- 611 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-------~---~~~~--- 611 (667)
...+...+++.|+||| ++.++||||+||++|||++|+.||............... . ....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 3333345688899999 356899999999999999999998532211000000000 0 0000
Q ss_pred cCCCCCC-CCCchH----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 612 LDPRLPP-PSPDVQ----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 612 ~~~~~~~-~~~~~~----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
-....+. +..... .....+.+++.+|++.||++|||+.|++++.||......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 0000000 000000 012345678899999999999999999999999755443
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=8.1e-29 Score=249.50 Aligned_cols=225 Identities=24% Similarity=0.357 Sum_probs=168.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... ++..+|+|.+...... .....+.+.+|++++++++||||+++++++.++...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV-EKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc-chhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 4677889999999999999875 5788999988643221 1234567999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||+++++|.+.+..... ..|.||||+||++++++.+||+|||++....... ....
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~ 158 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTS 158 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccc
Confidence 99999999888754411 1133999999999999999999999998654332 2234
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|+..|+||| ++.++||||||+++|||++|+.|+...... ........... ..+..+... ...+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~------~~~~ 229 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET-ADVLYPATW------STEA 229 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc-ccccCcccC------cHHH
Confidence 57889999999 367899999999999999999998643321 01110000000 111112111 1356
Q ss_pred HHHHHhccccCCCCCCCH--HHHHHHHHH
Q 042735 631 MEVAFSCLDVSPESRPTM--QTITQQLLF 657 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~--~ev~~~l~~ 657 (667)
.+++.+||+.+|.+||++ +|++++.||
T Consensus 230 ~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 230 IDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 678889999999999999 888876553
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=9.2e-28 Score=241.43 Aligned_cols=224 Identities=26% Similarity=0.411 Sum_probs=169.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSIL 498 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~l 498 (667)
+|...+.||+|++|.||+|... ++..+++|++...... ....+.+.+|++++++++||||+++++.+... +..++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence 3667789999999999999875 6888999988654321 23456789999999999999999999999988 88999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
|+||+++++|.+.+.... ...|.|++|+||+++.++.+||+|||.+........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 999999999988775432 112339999999999999999999999987655432
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcc-ccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDE-MLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 625 (667)
......++..|+||| ++.++||||||+++|||++|+.||..... .......... ...+.++...
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~----- 229 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGSSGEPPEIPEHL----- 229 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccccCCCcCCCccc-----
Confidence 133467899999999 35689999999999999999999864331 0000001100 0011111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+|++.+|++||++.|++++.|+
T Consensus 230 -~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 230 -SEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -CHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 2356778889999999999999999998764
No 319
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=4.6e-28 Score=246.77 Aligned_cols=224 Identities=21% Similarity=0.274 Sum_probs=163.9
Q ss_pred eecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||+||+|.. .+++.+|+|.+...... .....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 68999999999975 45788999987643211 11234457889999999999999999999999999999999999999
Q ss_pred hHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccc
Q 042735 508 LATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 508 L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|.+.+.... . ..|.||+|+||+++.++.+||+|||+++..... .......|+.
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~ 158 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTP 158 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCCC
Confidence 988775422 0 113399999999999999999999999865432 2223456888
Q ss_pred cccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+|||+ +.++|||||||++|||++|+.||................ .. .....+... ...+.+++.
T Consensus 159 ~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~------~~~~~~li~ 230 (277)
T cd05577 159 GYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT-LE-MAVEYPDKF------SPEAKDLCE 230 (277)
T ss_pred CcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc-cc-ccccCCccC------CHHHHHHHH
Confidence 9999993 568999999999999999999985432211111111100 00 011111111 224567888
Q ss_pred hccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 636 SCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 636 ~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
+||+.+|++|| ++.+++.+.|+....|
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 231 ALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred HHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 99999999999 8888999998876554
No 320
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=1.1e-27 Score=243.41 Aligned_cols=222 Identities=27% Similarity=0.441 Sum_probs=158.8
Q ss_pred CcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 423 FDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
|...+.||+|+||.||+|... .+..+|||.+...... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS--SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC--hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 455678999999999999753 3578999988654322 233567899999999999999999999886542
Q ss_pred --ceEEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEeccc
Q 042735 495 --HSILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 495 --~~~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
..++++||+++|+|.+.+.... ...|.||||+||+++.++.+|++|||
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccc
Confidence 3478999999999987653210 01134999999999999999999999
Q ss_pred ccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccC
Q 042735 543 IAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 543 la~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 613 (667)
+++....... ......+++.|++|| ++.++|||||||++|||++ |+.|+..... ...... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~~~~-~~~~~~ 233 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEIYNY-LIKGNR 233 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHHHHH-HHcCCc
Confidence 9986543221 112334567899999 3678999999999999999 8888653211 111100 001001
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+. . ....+.+++.+||+.+|++|||++|+++.|..
T Consensus 234 ~~~~~---~---~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 234 LKQPP---D---CLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred CCCCC---C---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11111 1 12357788899999999999999999998864
No 321
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=1.1e-27 Score=240.48 Aligned_cols=222 Identities=24% Similarity=0.401 Sum_probs=168.7
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|++|.||+|... ++..+++|.+...... ......+.+|++++++++|||++++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 4677889999999999999764 5778999998754322 234567999999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 501 EYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||+++++|.+.+.... ...|.||||+||+++.++.+||+|||+++...........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 9999999988765321 1123499999999999999999999999876654433344
Q ss_pred ccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..|+..|+|||+ +.++||||+|+++|||++|+.|+..... ...... ......+..+... ...+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~--~~~~~~~~~~~~~------~~~~ 227 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFR--IVQDDHPPLPEGI------SPEL 227 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHH--HhccCCCCCCCCC------CHHH
Confidence 678999999994 5689999999999999999999753221 011111 0011111122111 2246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.+++.+||..+|++|||+.|++.+.|
T Consensus 228 ~~~i~~~l~~~p~~R~~~~~~l~~~~ 253 (254)
T cd06627 228 KDFLMQCFQKDPNLRPTAKQLLKHPW 253 (254)
T ss_pred HHHHHHHHhCChhhCcCHHHHhcCCC
Confidence 67888999999999999999997654
No 322
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.95 E-value=4.5e-29 Score=230.30 Aligned_cols=222 Identities=22% Similarity=0.308 Sum_probs=165.5
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR----- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~----- 494 (667)
.+|.+.+.+|+|||+-||.++ ..++..+|+|++.... .++.+..++|++.-++++||||++++++...+.
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 468888999999999999997 5667889999986532 345677899999999999999999999875443
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
..|+++.|...|+|.+.+.... ...|.||||.|||+.+++.+++.|||-+
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 4899999999999988664311 1235599999999999999999999998
Q ss_pred ccccCCC---------CCcccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh
Q 042735 545 KFLKPDS---------SNWSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 545 ~~~~~~~---------~~~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 606 (667)
....-.- ..+....-|..|.||| .++++|||||||++|+|+.|..||+..... ..+.
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--GgSl--- 251 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--GGSL--- 251 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--CCeE---
Confidence 7543111 0122234578899999 267999999999999999999998732210 0000
Q ss_pred hhccccCCC--CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 607 RLDEMLDPR--LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 607 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
.-.+..+. +|...+ ....+.+++..|++.||.+||+..+++.++.
T Consensus 252 -aLAv~n~q~s~P~~~~----yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 252 -ALAVQNAQISIPNSSR----YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred -EEeeeccccccCCCCC----ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 01111221 222222 2235677888999999999999999998764
No 323
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=4.1e-28 Score=248.28 Aligned_cols=232 Identities=22% Similarity=0.339 Sum_probs=163.5
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSILI 499 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~lv 499 (667)
|+..+.||+|+||.||+|... ++..+|+|++..... .....+.+.+|++++++++|||++++++++.+. +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE--KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc--cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 456778999999999999875 478899999875431 122345688999999999999999999999988 889999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
|||+++ +|.+.+.... ...|.||||+||++++++.+||+|||++........ .
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 999985 7877664321 112349999999999999999999999987654321 1
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhcc-----c
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLDE-----M 611 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~~-----~ 611 (667)
.+...++..|+||| ++.++|||||||++|||+||+.||............... .... .
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 23346788999999 356899999999999999999997532211000000000 0000 0
Q ss_pred cCCCCCCCC--CchH-H-HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 612 LDPRLPPPS--PDVQ-G-KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 612 ~~~~~~~~~--~~~~-~-~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+....+. .+.. . ....+.+++.+||..+|++||++.+++++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 000000000 0000 0 13467789999999999999999999988764
No 324
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=4.1e-28 Score=262.23 Aligned_cols=218 Identities=20% Similarity=0.294 Sum_probs=164.3
Q ss_pred CCcCcceeecccCeEEEEEEeCCC-ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEE-EEe------
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSK-EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGF-CSH------ 492 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~-~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~-~~~------ 492 (667)
..++.+.|.+|||+.||.|....+ ..+|+|++... +....+...+||++|++|+ |||||.|++. ...
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 456778899999999999987665 89999997643 3345677899999999998 9999999993 321
Q ss_pred CCceEEEEEecCCCChHHHhccc----------------------------cCCcccccccCCeeecCCCceEEeccccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSND----------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~----------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
..+.+|.||||+||.|-+++... ....|+|||-+||||+.++..||||||-|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 24678999999999998876421 12346699999999999999999999988
Q ss_pred ccccCCCCC---cc------cccccccccCCC----C-----CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh
Q 042735 545 KFLKPDSSN---WS------ALVGTYRYVAPD----Y-----RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 545 ~~~~~~~~~---~~------~~~Gt~~y~aPE----~-----~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 606 (667)
...-..... .. ...-|+-|-||| | ++|+||||+||+||-|+....||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 642211100 00 012478999999 3 6899999999999999999999873211
Q ss_pred hhccccCCC--CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 607 RLDEMLDPR--LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 607 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
-.+++.. +|+.. .....+.+++..||+.+|++||+.-||+.+++...
T Consensus 264 --laIlng~Y~~P~~p----~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 264 --LAILNGNYSFPPFP----NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred --eeEEeccccCCCCc----cHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 1222322 23321 23346778888999999999999999999887653
No 325
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=4.8e-28 Score=244.12 Aligned_cols=223 Identities=22% Similarity=0.265 Sum_probs=158.3
Q ss_pred ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHH-HHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEA-LTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.||+|+||.||+|.. .+++.+|||.+....... ......+..|..+ ....+|||++++++++...+..++||||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 3589999999999976 457889999876432111 1122344555554 445689999999999999999999999999
Q ss_pred CCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccccccc
Q 042735 505 RGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGT 560 (667)
Q Consensus 505 ~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt 560 (667)
+|+|.+.+..... ..|.||+|+||+++.++.+||+|||+++.... .....|+
T Consensus 81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~ 156 (260)
T cd05611 81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGT 156 (260)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCC
Confidence 9999988754221 11349999999999999999999999986432 2345688
Q ss_pred ccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 561 YRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 561 ~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
+.|+||| ++.++|||||||++|||+||+.|+..... .......... ....+.... ......+.+++
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~i 228 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP----DAVFDNILSR--RINWPEEVK--EFCSPEAVDLI 228 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhc--ccCCCCccc--ccCCHHHHHHH
Confidence 9999999 36789999999999999999999853221 0111100000 111111111 01123567888
Q ss_pred HhccccCCCCCCCH---HHHHHHHHHhhhhh
Q 042735 635 FSCLDVSPESRPTM---QTITQQLLFSLVYF 662 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~---~ev~~~l~~~~~~~ 662 (667)
.+||+.+|++||++ +|++.+.|+....+
T Consensus 229 ~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 229 NRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 89999999999954 79998988866543
No 326
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=2.4e-28 Score=256.13 Aligned_cols=238 Identities=23% Similarity=0.317 Sum_probs=165.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC--Cc
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA--RH 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~--~~ 495 (667)
.++|+..+.||+|+||.||+|... ++..+|||++...... ......+.+|+.+++++ +||||++++|++... ..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 467888889999999999999865 5788999987543221 12234677899999999 999999999998654 36
Q ss_pred eEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
.++||||++ ++|...+.... ...|.||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 899999998 58877664321 112349999999999999999999999986643321
Q ss_pred -----CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCC-----------Chhhhh----
Q 042735 553 -----NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILP-----------SPSVIN---- 605 (667)
Q Consensus 553 -----~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-----------~~~~~~---- 605 (667)
......||+.|+|||+ +.++|||||||++|||+||+.||........ ......
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 2234578999999993 4579999999999999999999753211100 000000
Q ss_pred hhhccccC----CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 606 MRLDEMLD----PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 606 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+++ ................+.+++.+||+.+|++|||+.+++++.|+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 00000000 00000000000112356788899999999999999999999877543
No 327
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.95 E-value=2e-28 Score=254.42 Aligned_cols=233 Identities=20% Similarity=0.278 Sum_probs=161.2
Q ss_pred CcCcceeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSI 497 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~ 497 (667)
|+..+.||+|+||.||+|... .+..+|+|.+...... .....+.+.+|++++++++||||+++++++.+. +..+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 667788999999999999864 4788999988753211 111234578899999999999999999999988 7899
Q ss_pred EEEEecCCCChHHHhcccc-----------------------------CCcccccccCCeeecC----CCceEEeccccc
Q 042735 498 LIYEYLKRGSLATNLSNDA-----------------------------AAEELDISSKNVLLDL----EHKAHVSDFGIA 544 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-----------------------------~~~~~dlk~~NiLld~----~~~~kl~DFGla 544 (667)
+||||+++ ++.+.+.... ...|.||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999985 5554432110 0113499999999999 999999999999
Q ss_pred ccccCCCC---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC----Chhhhhhhhcc
Q 042735 545 KFLKPDSS---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP----SPSVINMRLDE 610 (667)
Q Consensus 545 ~~~~~~~~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~----~~~~~~~~~~~ 610 (667)
+....... ......||+.|+||| ++.++|||||||++|||++|+.||........ ........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 86543221 123457889999999 35679999999999999999999863322110 00000000000
Q ss_pred ccC-----------------------CCCCCCCCchH-------HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 611 MLD-----------------------PRLPPPSPDVQ-------GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 611 ~~~-----------------------~~~~~~~~~~~-------~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+. .....+..... .....+.+++.+|++.+|++|||++|++++.||
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 00000000000 112357789999999999999999999988765
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=2.6e-28 Score=267.94 Aligned_cols=237 Identities=19% Similarity=0.240 Sum_probs=156.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC--CceEEEEec--------------CCCCCCchHHhHHHHHHHHHHHHhcCCCCe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS--KEFLAVKKF--------------NSPLPSDQIADQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~--~~~~avk~~--------------~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 483 (667)
.++|+..+.||+|+||.||++..+. +...++|.+ .+.. .........+.+|+.++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRV-KAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHh-hcchHHHHHHHHHHHHHHhCCCCCc
Confidence 5789999999999999999986532 222222211 0000 0111234568899999999999999
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHHhccc-----------------------------cCCcccccccCCeeecCCC
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATNLSND-----------------------------AAAEELDISSKNVLLDLEH 534 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~-----------------------------~~~~~~dlk~~NiLld~~~ 534 (667)
|++++++...+..|+|+||+.+ ++...+... ....|.||||+|||++.++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 9999999999999999999864 555443211 1122459999999999999
Q ss_pred ceEEecccccccccCCCC-CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCC-CCCCccCCCChhhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSS-NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHP-RGFVSSILPSPSVINM 606 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~-~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p-~~~~~~~~~~~~~~~~ 606 (667)
.+||+|||+++....... ......||+.|+||| |+.++|||||||++|||++|+.+ +..... .+.......
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~-~~~~~~~~~ 383 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG-KPGKQLLKI 383 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC-CHHHHHHHH
Confidence 999999999987654322 223467999999999 56789999999999999998754 321110 000000000
Q ss_pred h-hccccCCCCCC----------------CCCchH------HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 607 R-LDEMLDPRLPP----------------PSPDVQ------GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 607 ~-~~~~~~~~~~~----------------~~~~~~------~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. ........++. ...... .....+.+++.+|++.||.+|||+.|++.+.||..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 0 00000000000 000000 00123456678999999999999999999999864
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=1.5e-28 Score=257.61 Aligned_cols=236 Identities=19% Similarity=0.267 Sum_probs=165.3
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
.++|...+.||+|+||.||+|.. .++..||+|++.... .......+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 36788999999999999999975 568889999875321 1223456889999999999999999999876543
Q ss_pred -ceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 -HSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 -~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..++|+||+++ ++.+.+.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred ceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 57999999985 7766554321 1224499999999999999999999999865432
Q ss_pred CC---CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCC---------CChhhhhhhhccc
Q 042735 551 SS---NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSIL---------PSPSVINMRLDEM 611 (667)
Q Consensus 551 ~~---~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~---------~~~~~~~~~~~~~ 611 (667)
.. ......||+.|+|||. +.++|||||||++|||+||+.||....... ..+.... ...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 237 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED--LNCI 237 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH--HHHh
Confidence 21 1233578999999993 457999999999999999999985321100 0000000 0000
Q ss_pred cCC-------CCCCCCC-c----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 LDP-------RLPPPSP-D----VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 ~~~-------~~~~~~~-~----~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+. ..+.... . .......+.+++.+||+.+|++|||+.|++++.|+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 000 0000000 0 001123567899999999999999999999999886543
No 330
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95 E-value=2.2e-28 Score=251.48 Aligned_cols=234 Identities=18% Similarity=0.273 Sum_probs=162.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCc---
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARH--- 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~--- 495 (667)
++|+..+.||+|+||.||+|... ++..||+|+....... ......+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 36788899999999999999864 5788999987543221 112346888999999996 6999999999987665
Q ss_pred --eEEEEEecCCCChHHHhccccC-----------------------------CcccccccCCeeecC-CCceEEecccc
Q 042735 496 --SILIYEYLKRGSLATNLSNDAA-----------------------------AEELDISSKNVLLDL-EHKAHVSDFGI 543 (667)
Q Consensus 496 --~~lv~ey~~~g~L~~~l~~~~~-----------------------------~~~~dlk~~NiLld~-~~~~kl~DFGl 543 (667)
.|+||||+++ ++.+.+..... ..|.||||+||+++. ++.+||+|||+
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 8999999995 78776542110 113399999999998 89999999999
Q ss_pred cccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM---------- 606 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---------- 606 (667)
++.........+...+++.|+||| ++.++|||||||++|||+||+.||...............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 986543322233446788999999 256899999999999999999997532211000000000
Q ss_pred hhcccc----CCCCCCCCC-c-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 607 RLDEML----DPRLPPPSP-D-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 607 ~~~~~~----~~~~~~~~~-~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...... .+...+... . .......+.+++.+||+.+|++||++.|++.+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~ 294 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence 000000 000000000 0 00112356788999999999999999999998775
No 331
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=1.2e-27 Score=240.48 Aligned_cols=223 Identities=24% Similarity=0.390 Sum_probs=169.5
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|... ++..+++|++..... .....+.+.+|++++++++|||++++++.+...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 4677789999999999999864 578899998865322 1234567889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 501 EYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||+++++|.+.+.... ...|.|++|+||+++.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD 158 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcc
Confidence 9999999988775421 011339999999999999999999999987654432
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......|++.|+||| ++.++||||+|+++|||++|+.|+.... ............ .+.++. . .
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~-~~~~~~---~---~ 227 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN----LLELALKILKGQ-YPPIPS---Q---Y 227 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc----HHHHHHHHhcCC-CCCCCC---C---C
Confidence 334457899999999 3678999999999999999999975332 111111111111 111121 1 1
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||..+|++|||+.|++++.|+
T Consensus 228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 228 SSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 1246678889999999999999999987653
No 332
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=7.6e-29 Score=257.09 Aligned_cols=223 Identities=19% Similarity=0.347 Sum_probs=162.1
Q ss_pred cceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc--eEEEEEe
Q 042735 426 KYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH--SILIYEY 502 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~--~~lv~ey 502 (667)
..+||+|+|=+||+|... .|..||=-.++........+..+.|..|+.+|+.|.|||||++|.++.+... ..+|.|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 356999999999999653 3544432111111111223445789999999999999999999999988655 7799999
Q ss_pred cCCCChHHHhccc--------------------------cCCcccccccCCeeec-CCCceEEecccccccccCCCCCcc
Q 042735 503 LKRGSLATNLSND--------------------------AAAEELDISSKNVLLD-LEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 503 ~~~g~L~~~l~~~--------------------------~~~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
+..|+|+.++.+. ....|.|||.+||+|. ..|.|||+|.|+|+..... .+.
T Consensus 125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--~ak 202 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--HAK 202 (632)
T ss_pred ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--ccc
Confidence 9999998776432 1234569999999997 6699999999999987543 344
Q ss_pred cccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 556 ALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 556 ~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+.|||.+|||| |++.+||||||+.|+||+|+.-||..- ..+..+..++...+-|.--.... -.++
T Consensus 203 svIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC----~n~AQIYKKV~SGiKP~sl~kV~-----dPev 273 (632)
T KOG0584|consen 203 SVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSEC----TNPAQIYKKVTSGIKPAALSKVK-----DPEV 273 (632)
T ss_pred eeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhh----CCHHHHHHHHHcCCCHHHhhccC-----CHHH
Confidence 579999999998 899999999999999999999998622 12222222221111111100011 1246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+|+.+|+.. .++|||+.|++.+.||...
T Consensus 274 r~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 274 REFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 7888899999 8999999999999988653
No 333
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=3.2e-28 Score=252.28 Aligned_cols=224 Identities=21% Similarity=0.318 Sum_probs=173.2
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+..|.....||+|.|+.|..|+. .++..||+|.+.+... +. ...+.+.+|+++|..++|||||+++.+......+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-Ch-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 45678888999999999999976 4578899998876433 22 233458999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+.+|++++++..+.. ..|.|||++|||||.++++||+|||++..+... ...
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-~~l 211 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-LML 211 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-ccc
Confidence 9999999999998865421 123499999999999999999999999987743 345
Q ss_pred ccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.+.||++.|.||| | ..++|+||+||++|-|+.|..||+...-....+.+ +... -+++..-..
T Consensus 212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv----l~gk--~rIp~~ms~----- 280 (596)
T KOG0586|consen 212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV----LRGK--YRIPFYMSC----- 280 (596)
T ss_pred cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh----eeee--ecccceeec-----
Confidence 6789999999999 2 46899999999999999999999743211111111 1111 112222111
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+.-+++.+.+..+|.+|+++++|.++-|..
T Consensus 281 -dce~lLrk~lvl~Pskr~~~dqim~~~W~n 310 (596)
T KOG0586|consen 281 -DCEDLLRKFLVLNPSKRGPCDQIMKDRWRN 310 (596)
T ss_pred -hhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence 233566678999999999999999886653
No 334
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=3.5e-28 Score=254.79 Aligned_cols=237 Identities=21% Similarity=0.280 Sum_probs=166.0
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~ 494 (667)
.+|...+.||+|+||.||+|.. .++..||||++...... ......+.+|+.++++++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN--RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 4678888999999999999975 56889999987653221 12234677899999999999999999988654 3
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..++||||+. ++|.+.+.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 4799999997 67776654321 1123499999999999999999999999876543
Q ss_pred CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhh----hhhh
Q 042735 551 SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVI----NMRL 608 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~----~~~~ 608 (667)
........||..|+||| ++.++|||||||++|||++|+.||....... +..... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23334457889999999 3468999999999999999999985322100 000000 0000
Q ss_pred ccccC--CCCCCCC--CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 609 DEMLD--PRLPPPS--PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 609 ~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+. +..+... .........+.+++.+||+.+|++|||++|++++.|+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000 0000000 0000122356789999999999999999999999998653
No 335
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=1.6e-27 Score=242.82 Aligned_cols=223 Identities=20% Similarity=0.251 Sum_probs=159.6
Q ss_pred eeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHH---HHHHhcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 428 CIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEI---EALTKIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.||+|+||.||+|.. .+++.+|+|.+........ .....+..|. +.++...||||+++++++.+.+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 479999999999976 4578999998765322111 1112233443 3455568999999999999999999999999
Q ss_pred CCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 504 KRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 504 ~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
++|+|.+++..... ..|.|+||+||+++.++.+||+|||+++..... ......|
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~ 157 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVG 157 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCC
Confidence 99999887743321 123499999999999999999999999755322 2234579
Q ss_pred cccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH
Q 042735 560 TYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME 632 (667)
Q Consensus 560 t~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (667)
|..|+||| ++.++||||+||++|||++|+.||....... ...... .....++.++... ...+.+
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~--~~~~~~-~~~~~~~~~~~~~------s~~~~~ 228 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR-MTLTMAVELPDSF------SPELRS 228 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc--hHHHHH-HhhccCCCCCCcC------CHHHHH
Confidence 99999999 3567899999999999999999986432111 001110 0111122222211 224667
Q ss_pred HHHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 633 VAFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 633 ~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
++.+|+..+|++|| ++++++++.|+....|
T Consensus 229 li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~ 263 (278)
T cd05606 229 LLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW 263 (278)
T ss_pred HHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence 88899999999999 9999999999876554
No 336
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=1.1e-27 Score=252.88 Aligned_cols=239 Identities=21% Similarity=0.336 Sum_probs=167.2
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA----- 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~----- 493 (667)
.++|+..+.||+|+||.||+|.. .++..+|+|++...... ....+.+.+|+.++++++||||+++++++...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN--VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC--hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 46788899999999999999975 46889999987643221 22345678899999999999999999988643
Q ss_pred -CceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 494 -RHSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
...++||||+.+ +|.+.+... ....|.||||+||+++.++.+||+|||+++.....
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 357999999974 676654321 11224599999999999999999999999865432
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhh---hhhcc
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVIN---MRLDE 610 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~---~~~~~ 610 (667)
. ......||+.|+||| ++.++|||||||++|||++|+.||....... +...... .....
T Consensus 172 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 172 F-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred C-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 2 223456899999999 5778999999999999999999975322100 0000000 00000
Q ss_pred ccC---------------CC-CCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 611 MLD---------------PR-LPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 611 ~~~---------------~~-~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
..+ .. .+..... .......+.+++.+||+.||++|||+.|++++.|+...++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 000 00 0000000 0012234678899999999999999999999998875443
No 337
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=266.91 Aligned_cols=221 Identities=26% Similarity=0.434 Sum_probs=164.9
Q ss_pred cCcceeecccCeEEEEEEeC----C----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC
Q 042735 424 DAKYCIGSGRHGSVYRAELP----S----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR 494 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~----~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~ 494 (667)
...+.+|+|.||.|++|... . ...||||.++..... .+.+.+..|+++|..+. |||||.++|+|...+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~---~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS---SEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCc---HHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34458999999999999642 1 346999998765432 45678999999999986 999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc-----------------CC-----------------------cccccccCCeeecCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-----------------AA-----------------------EELDISSKNVLLDLEH 534 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-----------------~~-----------------------~~~dlk~~NiLld~~~ 534 (667)
..++|+||+..|+|.++|...+ .. .|.|+.++|||+.++.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK 455 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence 9999999999999999887655 10 1239999999999999
Q ss_pred ceEEecccccccccCCCCCc-cccccc--ccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhh
Q 042735 535 KAHVSDFGIAKFLKPDSSNW-SALVGT--YRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVI 604 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~~~-~~~~Gt--~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~ 604 (667)
.+||+|||+||......... ....|| ..||||| |+.|+|||||||+|||+.| |..|+.... ......
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~ 532 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELL 532 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHH
Confidence 99999999999654433222 222333 3599999 7899999999999999999 778875311 111111
Q ss_pred hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 605 NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
. .+........|..+ ..++.++|..||+.+|++||++.|+.+.+..
T Consensus 533 ~-~l~~G~r~~~P~~c------~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 533 E-FLKEGNRMEQPEHC------SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred H-HHhcCCCCCCCCCC------CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 1 12221111122221 2357789999999999999999999987766
No 338
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=8.7e-28 Score=248.88 Aligned_cols=236 Identities=21% Similarity=0.291 Sum_probs=161.1
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc--
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH-- 495 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~-- 495 (667)
..++|+....||+|+||.||+|... ++..+|||++....... .....+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--GFPITALREIKILQLLKHENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--CchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence 3467889999999999999999864 57889999875432211 122346789999999999999999999876543
Q ss_pred ------eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 496 ------SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 496 ------~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
.++||||+.+ ++.+.+.... ...|.||||+||+++.++.+||+|||++
T Consensus 88 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 88 NRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred cCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 4999999975 6766554321 1123499999999999999999999999
Q ss_pred ccccCCCC----CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-----------hh
Q 042735 545 KFLKPDSS----NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-----------PS 602 (667)
Q Consensus 545 ~~~~~~~~----~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-----------~~ 602 (667)
........ ......|+..|+|||+ +.++|||||||++|||+||+.|+......... +.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 86543221 1233467889999993 46899999999999999999987532210000 00
Q ss_pred hhhhh-hccccC-CCCCCCCC-chH------HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 603 VINMR-LDEMLD-PRLPPPSP-DVQ------GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 603 ~~~~~-~~~~~~-~~~~~~~~-~~~------~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..... .....+ ...+.... ... .....+.+++.+||..+|++|||++|++++.||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00000 000000 00000000 000 011245688999999999999999999998765
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=6.8e-28 Score=246.24 Aligned_cols=230 Identities=23% Similarity=0.345 Sum_probs=163.4
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ 500 (667)
|...+.||+|++|.||+|... +++.+++|++...... .......+|++.+++++ ||||+++++++.+++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 456778999999999999875 4678999987654321 12234567999999999 999999999999999999999
Q ss_pred EecCCCChHHHhcccc--C------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 501 EYLKRGSLATNLSNDA--A------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||+ +|+|.+.+.... . ..|.||||+||+++.++.+||+|||+++....... .
T Consensus 78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 155 (283)
T cd07830 78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-Y 155 (283)
T ss_pred ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-c
Confidence 999 889987775432 1 11339999999999999999999999986643322 2
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-------------hhhhhccccCC
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV-------------INMRLDEMLDP 614 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~ 614 (667)
+...|+..|+|||+ +.++||||||+++|||+||+.||............ .........+.
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 34568899999993 56899999999999999999887532211000000 00000001111
Q ss_pred CCCCCCCchH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 615 RLPPPSPDVQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 615 ~~~~~~~~~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+...+... .....+.+++.+||+.+|++|||+.|++.+.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 1111110000 012357789999999999999999999988664
No 340
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=4.5e-28 Score=254.48 Aligned_cols=242 Identities=20% Similarity=0.328 Sum_probs=166.8
Q ss_pred HHHHHHHH----cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEE
Q 042735 413 YVEIIRAI----NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFY 487 (667)
Q Consensus 413 ~~~~~~~~----~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~ 487 (667)
.+|+.+++ ++|.....||+|+||.||+|.. .++..+|||++....... .....+.+|++++++++||||++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~ 80 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE--IFAKRAYRELTLLKHMQHENVIGLL 80 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc--cchhHHHHHHHHHHhcCCCCccchh
Confidence 34555444 7888889999999999999985 468899999886543221 2234688999999999999999999
Q ss_pred EEEEeCC------ceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEe
Q 042735 488 GFCSHAR------HSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 488 g~~~~~~------~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~ 539 (667)
+++.... ..++|+||+.. ++....... ....|.||||+||+++.++.+||+
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~ 159 (342)
T cd07879 81 DVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKIL 159 (342)
T ss_pred heecccccCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence 9987543 45899999974 665543211 112345999999999999999999
Q ss_pred cccccccccCCCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CCh
Q 042735 540 DFGIAKFLKPDSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSP 601 (667)
Q Consensus 540 DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~ 601 (667)
|||+++..... .....||+.|+|||. +.++|||||||++|||++|+.||....... +.+
T Consensus 160 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 160 DFGLARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred eCCCCcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999865322 234568899999993 457999999999999999999986322100 000
Q ss_pred hhhhhh----hccccC--CCCCCCC-Cc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 602 SVINMR----LDEMLD--PRLPPPS-PD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 602 ~~~~~~----~~~~~~--~~~~~~~-~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...... ...... +..+... .. .......+.+++.+||+.+|++||+++|++.+.||...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 000000 000000 0000000 00 00112246688899999999999999999999888654
No 341
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95 E-value=5.3e-28 Score=251.05 Aligned_cols=230 Identities=17% Similarity=0.179 Sum_probs=158.2
Q ss_pred eecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCCh
Q 042735 429 IGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSL 508 (667)
Q Consensus 429 lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L 508 (667)
+|.|+++.||++.. ++..+|||++..... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+|
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 34444444444444 688899999865322 223456799999999999999999999999999999999999999999
Q ss_pred HHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-------Ccc
Q 042735 509 ATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-------NWS 555 (667)
Q Consensus 509 ~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-------~~~ 555 (667)
.+.+.... ...|.||||+||+++.++.+|++|||.+........ ...
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence 88775321 011339999999999999999999999875532211 123
Q ss_pred cccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcc-----------------
Q 042735 556 ALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDE----------------- 610 (667)
Q Consensus 556 ~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~----------------- 610 (667)
...++..|+||| |+.++|||||||++|||++|+.||...................
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQS 246 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcc
Confidence 346788999999 3568999999999999999999986322110000000000000
Q ss_pred ---ccCCCCC--CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 611 ---MLDPRLP--PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 611 ---~~~~~~~--~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..++... ............+.+++.+||..+|++|||++|++++.++....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0000000 00001111223567889999999999999999999999987553
No 342
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95 E-value=2.5e-27 Score=239.49 Aligned_cols=225 Identities=23% Similarity=0.326 Sum_probs=162.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~ 496 (667)
.+|+..+.||+|+||.||+|.. .++..+|+|.+...... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 3678889999999999999976 45788999986432211 1123345789999999999999999999998764 457
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCC--
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD-- 550 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~-- 550 (667)
++|+||+++++|.+.+..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 899999999999887653211 123499999999999999999999999865321
Q ss_pred -CCCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 551 -SSNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 551 -~~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
....+...|+..|+|||+ +.++|||||||++|||++|+.||..... .............+..+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~p~~---- 233 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFKIATQPTKPMLPDG---- 233 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHHHHcCCCCCCCCcc----
Confidence 112234568999999993 5689999999999999999999853211 1111111000011111211
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
....+.+++.+||. +|.+|||+.+++.+.+
T Consensus 234 --~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 234 --VSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred --cCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 11246678889999 5799999999987654
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=1e-27 Score=247.37 Aligned_cols=236 Identities=22% Similarity=0.317 Sum_probs=162.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR--- 494 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~--- 494 (667)
+.++|+..+.||+|+||.||+|... ++..+|+|++....... .....+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 5678999999999999999999875 57889999886432211 22346788999999999999999999987654
Q ss_pred -------ceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEeccc
Q 042735 495 -------HSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 495 -------~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
..++|+||+++ ++...+.... ...|.||||+||++++++.+||+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 78999999986 5555443211 11234999999999999999999999
Q ss_pred ccccccCCCC-CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-------h
Q 042735 543 IAKFLKPDSS-NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-------R 607 (667)
Q Consensus 543 la~~~~~~~~-~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-------~ 607 (667)
+++....... ......++..|+||| ++.++|||||||++|||++|+.||............... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAV 241 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 9987654331 223345688899999 245799999999999999999998632211000000000 0
Q ss_pred hccc--------cCCCCC--CC-CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 608 LDEM--------LDPRLP--PP-SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 608 ~~~~--------~~~~~~--~~-~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+ .++... .. ..........+.+++.+||+.+|++|||+.+++.+.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0000 000000 00 00000112357788999999999999999999987653
No 344
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.6e-27 Score=243.26 Aligned_cols=229 Identities=18% Similarity=0.284 Sum_probs=159.7
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC--CceEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHA--RHSIL 498 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~--~~~~l 498 (667)
|...+.||+|+||.||+|.. .++..+|+|++....... ......+|+.++.++. ||||+++++++.+. +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL---EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc---hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 45567899999999999975 467889999876532211 1234567999999986 99999999999987 88999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||++ |++.+.+.... ...|.||||+||+++. +.+||+|||+++.......
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 999997 57766664321 1123499999999999 9999999999987643322
Q ss_pred cccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh-hhccccCC
Q 042735 554 WSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM-RLDEMLDP 614 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~-~~~~~~~~ 614 (667)
.....|+..|+|||+ +.++|||||||++|||++|+.||....... +....... ......+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 233568899999993 458999999999999999999985322100 00000000 00000000
Q ss_pred CCCCCCCc-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 615 RLPPPSPD-----VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 615 ~~~~~~~~-----~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+..... .......+.+++.+||+.+|++|||+++++++.||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 11110000 01123467889999999999999999999998764
No 345
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-29 Score=246.69 Aligned_cols=233 Identities=21% Similarity=0.271 Sum_probs=170.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|..-++||+|+||.||-++. .+|+.+|.|++.+.... ......-...|-.++.++..|.||.+--.|...+.+++|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiK-kr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIK-KRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHH-HhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 5688889999999999999975 56899999988654321 112233467899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+..|.||+|.-++..... ....|+||+|||||+.|+++|+|.|+|..+.....
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~- 342 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP- 342 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc-
Confidence 999999999877654321 01129999999999999999999999987765443
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.+..+||.+||||| |+..+|+||+||++|||+.|+.||.....-..... .+.+..+ ....++....
T Consensus 343 ~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE-vdrr~~~-~~~ey~~kFS------ 414 (591)
T KOG0986|consen 343 IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE-VDRRTLE-DPEEYSDKFS------ 414 (591)
T ss_pred cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH-HHHHHhc-chhhcccccC------
Confidence 33458999999999 88899999999999999999999853221100001 1111000 0111221111
Q ss_pred HHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 628 ISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
.+...+...-+.+||++|- .+++|.+|.+|..+.|-
T Consensus 415 ~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 415 EEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred HHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 1233444456899999884 57799999999877663
No 346
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=1.1e-27 Score=247.93 Aligned_cols=222 Identities=25% Similarity=0.360 Sum_probs=162.4
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|+||.||+|+. .++..+|+|.+...... .....+++.+|++++++++|||++++++++......++|||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 55567899999999999986 45778999987542211 12334568899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|+. |++.+.+.... ...|.||||+||+++.++.+||+|||++...... ..
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----~~ 170 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NX 170 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----cc
Confidence 997 57766543211 1123499999999999999999999999865432 24
Q ss_pred ccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..|++.|+|||+ +.++|||||||++|||+||+.|+...... ....... ....+.... . ...
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~--~---~~~ 240 (308)
T cd06634 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIA-QNESPALQS--G---HWS 240 (308)
T ss_pred ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----HHHHHHh-hcCCCCcCc--c---ccc
Confidence 568999999993 44799999999999999999996432110 0000000 001111111 1 112
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.+|++||++++++++.++...
T Consensus 241 ~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 241 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 346678889999999999999999999887654
No 347
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=6.9e-28 Score=246.92 Aligned_cols=233 Identities=21% Similarity=0.320 Sum_probs=166.3
Q ss_pred CCcCcceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCce
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~ 496 (667)
+|+..+.||+|+||.||+|.. .++..+|||.+............+.+.+|++++.+++ ||||+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778899999999999974 3467899998764322222233457889999999994 99999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
++||||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 999999999999887653211 11339999999999999999999999986543322
Q ss_pred C-cccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 553 N-WSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 553 ~-~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
. .....|+..|+|||+ +.++||||||+++|||+||+.||.............. .......+.+ ..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~-~~- 234 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR----RILKSKPPFP-KT- 234 (288)
T ss_pred cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH----HHHccCCCCC-cc-
Confidence 1 223568999999993 4579999999999999999999753221111111111 1111111111 11
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHH---HHHHHHHHhhhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQ---TITQQLLFSLVYF 662 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~---ev~~~l~~~~~~~ 662 (667)
....+.+++.+||+.+|++|||+. +++++.++....+
T Consensus 235 --~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 235 --MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred --cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 112456788899999999999964 5577777665543
No 348
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-28 Score=259.95 Aligned_cols=219 Identities=25% Similarity=0.449 Sum_probs=167.6
Q ss_pred cCcceeecccCeEEEEEEe-CCC----ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 424 DAKYCIGSGRHGSVYRAEL-PSK----EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~-~~~----~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
....+||+|+||+||+|.+ +.+ .+||+|++..... .+..++|..|+-+|++++|||+++++|+|.... ..|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~---~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS---PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC---chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 3457899999999999975 444 3689998765422 233467999999999999999999999998765 889
Q ss_pred EEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
|.+||+.|.|.++++.++. .-|.||.++|||+..-..+||.|||+|+.+.++...
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 9999999999998875431 113499999999999999999999999999887766
Q ss_pred cccccc--cccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 WSALVG--TYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~G--t~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
+++..| .+.|||=| |+.++|||||||++||++| |..|++.... ..+ ...++. ..+++.+.
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~----~eI-~dlle~--geRLsqPp---- 923 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA----EEI-PDLLEK--GERLSQPP---- 923 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH----HHh-hHHHhc--cccCCCCC----
Confidence 555444 36788887 7899999999999999999 8899764331 111 111111 12233221
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+..++.+||..|+..||+|.++..+...
T Consensus 924 iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 924 ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred CccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 234567788899999999999999998876543
No 349
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-29 Score=275.17 Aligned_cols=238 Identities=25% Similarity=0.321 Sum_probs=173.7
Q ss_pred HHHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 416 IIRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 416 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
+.-.-+||++.++||+|+||.|..++.+ +++.+|.|++.+-.-. ...+...|..|-++|..-+.+=||+++-.|.+++
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMl-Kr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEML-KRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHh-hchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 3334578999999999999999999875 4778999987641100 1123456889999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc-C-----------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
++|+|||||+||+|-..+..-. . ..|.||||+|||||..|++||+|||-+-.+..+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 9999999999999987775432 1 124599999999999999999999998776644
Q ss_pred -CCCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 551 -SSNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 551 -~~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
.....+.+|||.|++|| |+..+|+||+||++|||+.|..||...+-+..+..+.+- .+.+ .+|.
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h--k~~l--~FP~ 304 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH--KESL--SFPD 304 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch--hhhc--CCCc
Confidence 33445678999999998 788999999999999999999998533322111111110 0111 1221
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHHHHhhhhhc
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPT---MQTITQQLLFSLVYFS 663 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt---~~ev~~~l~~~~~~~~ 663 (667)
....... ..+++.+ +-.+|+.|-. .+++..|+||.++.|+
T Consensus 305 -~~~VSee---akdLI~~-ll~~~e~RLgrngiedik~HpFF~g~~W~ 347 (1317)
T KOG0612|consen 305 -ETDVSEE---AKDLIEA-LLCDREVRLGRNGIEDIKNHPFFEGIDWD 347 (1317)
T ss_pred -ccccCHH---HHHHHHH-HhcChhhhcccccHHHHHhCccccCCChh
Confidence 1112222 2233333 2236788887 9999999999998885
No 350
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=7.1e-28 Score=243.28 Aligned_cols=222 Identities=23% Similarity=0.304 Sum_probs=164.6
Q ss_pred eecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||.||+|+... ++.+++|.+...... .....+.+.+|++++.+++||||+++++.+...+..++||||+++|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-RKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-hhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 5899999999998764 889999988653221 12334678899999999999999999999999999999999999999
Q ss_pred hHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--------Ccc
Q 042735 508 LATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--------NWS 555 (667)
Q Consensus 508 L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--------~~~ 555 (667)
|.+.+..... ..|.||+|+||+++.++.+||+|||++........ ...
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 9887754211 12349999999999999999999999986443211 223
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...++..|+||| ++.++||||||+++||++||+.||..... .......... ....+... .....
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~--~~~~~~~~----~~~~~ 229 (265)
T cd05579 160 RIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP----EEIFQNILNG--KIEWPEDV----EVSDE 229 (265)
T ss_pred CcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcC--CcCCCccc----cCCHH
Confidence 456888999999 35689999999999999999999753221 1111111110 11111111 01235
Q ss_pred HHHHHHhccccCCCCCCCH---HHHHHHHHHhhhh
Q 042735 630 IMEVAFSCLDVSPESRPTM---QTITQQLLFSLVY 661 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~---~ev~~~l~~~~~~ 661 (667)
+.+++.+||+.+|++|||+ .+++++.||..+.
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 6678889999999999999 8999988886554
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=1.8e-27 Score=244.85 Aligned_cols=227 Identities=24% Similarity=0.388 Sum_probs=162.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|.... +..+|||.+..... .....++.+|+.++.+.. ||||++++|++.+....+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 3577888999999999999998865 78899999864322 122346777888777775 999999999999999999
Q ss_pred EEEEecCCCChHHHhcc--------------------------ccCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 498 LIYEYLKRGSLATNLSN--------------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~--------------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
+||||+++ ++...... .....|.||+|+||+++.++.+||+|||+++......
T Consensus 91 ~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 91 ICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred EEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 99999864 44332211 1123355999999999999999999999998654322
Q ss_pred CCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
. .....|++.|+|||+ +.++|||||||++|||++|+.||..... ........... ..+..+...
T Consensus 170 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~-~~~~~~~~~- 243 (296)
T cd06618 170 A-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT---EFEVLTKILQE-EPPSLPPNE- 243 (296)
T ss_pred c-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh---HHHHHHHHhcC-CCCCCCCCC-
Confidence 2 233468889999993 3479999999999999999999753211 00111111111 011111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....++.+++.+||+.+|++||++++++++.|+..
T Consensus 244 ---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 244 ---GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 11235678888999999999999999999988754
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=1.1e-27 Score=251.03 Aligned_cols=234 Identities=18% Similarity=0.233 Sum_probs=161.8
Q ss_pred cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchH----------HhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 426 KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQI----------ADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.+.||+|+||.||+|.. .+++.+|||++......... .....+.+|++++++++||||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 46799999999999975 46889999987643221100 00124779999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccC-
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP- 549 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~- 549 (667)
..++||||++ |+|.+.+.... ...|.||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~ 172 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYP 172 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccc
Confidence 9999999997 68877664321 112449999999999999999999999986541
Q ss_pred -------------CCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh--
Q 042735 550 -------------DSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR-- 607 (667)
Q Consensus 550 -------------~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~-- 607 (667)
.........+++.|+|||+ +.++|||||||++|||+||+.||...........+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~ 252 (335)
T PTZ00024 173 PYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGT 252 (335)
T ss_pred cccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 1111223457889999993 557999999999999999999975332110000000000
Q ss_pred -----hcc--------ccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 608 -----LDE--------MLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 608 -----~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
... ......+..... .......+.+++.+||+.+|++|||++|++.+.||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 253 PNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred CchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 000 000000000000 00112356788999999999999999999999998754
No 353
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=2.8e-27 Score=247.07 Aligned_cols=230 Identities=19% Similarity=0.231 Sum_probs=160.7
Q ss_pred eeecc--cCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSG--RHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g--~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+| +||+||+|.. .+++.||+|.+...... ....+.+.+|+.+++.++|||||++++++..++..++||||+.
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 45666 8999999986 56899999987643222 2334678899999999999999999999999999999999999
Q ss_pred CCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC-----
Q 042735 505 RGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN----- 553 (667)
Q Consensus 505 ~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~----- 553 (667)
+|++.+.+.... ...|.||||+||+++.++.+|++|||.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 999988775321 1123499999999999999999999865433221111
Q ss_pred --cccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-------------h---
Q 042735 554 --WSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-------------R--- 607 (667)
Q Consensus 554 --~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-------------~--- 607 (667)
.....++..|||||+ +.++|||||||++|||++|+.||............... .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR 242 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence 011235677999993 46789999999999999999998532110000000000 0
Q ss_pred ------------hc---------cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 608 ------------LD---------EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 608 ------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.. ...+..+.. +........+.+++.+||+.||++|||+.|++++.|+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRT--PSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccc--hhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00 000000000 11112334678899999999999999999999999987543
No 354
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=8.1e-28 Score=251.80 Aligned_cols=236 Identities=20% Similarity=0.305 Sum_probs=166.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH----ARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~----~~~ 495 (667)
++|+..+.||+|+||.||+|.. .++..+|+|++...... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 6788889999999999999975 46889999988653221 1234567889999999999999999998753 356
Q ss_pred eEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+. |+|.+++..... ..|.||||+||++++++.+||+|||+++......
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 899999996 588777643211 1234999999999999999999999998654322
Q ss_pred C----CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhh----h
Q 042735 552 S----NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVI----N 605 (667)
Q Consensus 552 ~----~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~----~ 605 (667)
. ......|+..|+||| ++.++|||||||++|||++|+.||....... +..... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 1 123457899999999 3568999999999999999999985322110 000000 0
Q ss_pred hhhcccc---CCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 606 MRLDEML---DPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 606 ~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....... ....+.+... .......+.+++.+||+.+|++|||+++++.+.|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 0000000 0000000000 0112345778899999999999999999999999864
No 355
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.95 E-value=4.7e-28 Score=254.29 Aligned_cols=165 Identities=32% Similarity=0.532 Sum_probs=135.4
Q ss_pred cCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------Cce
Q 042735 424 DAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------RHS 496 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------~~~ 496 (667)
...+.||+|+||.||+|+ ..+|+.||||.++.... .+..+...+|+++|++++|||||+++|+=.+. +..
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~---~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS---LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcc---cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 345679999999999998 57799999999876432 23455788999999999999999999876543 467
Q ss_pred EEEEEecCCCChHHHhccccC---------------------------CcccccccCCeeec--CCCc--eEEecccccc
Q 042735 497 ILIYEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLLD--LEHK--AHVSDFGIAK 545 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld--~~~~--~kl~DFGla~ 545 (667)
.+|||||++|||+..|..... ..|+||||.||++- ++|. -||+|||.||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 899999999999988865422 12459999999994 3333 5999999999
Q ss_pred cccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCC
Q 042735 546 FLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
.++++. ..++++||+.|.+|| |+..+|.|||||++||.+||..||-
T Consensus 173 el~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 173 ELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 887655 556789999999998 5667999999999999999999975
No 356
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=5.2e-27 Score=237.53 Aligned_cols=224 Identities=21% Similarity=0.298 Sum_probs=158.1
Q ss_pred HHHHHHHcCCcCccee--ecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEE
Q 042735 414 VEIIRAINDFDAKYCI--GSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGF 489 (667)
Q Consensus 414 ~~~~~~~~~f~~~~~l--g~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~ 489 (667)
.+.....++|+..+.+ |+|+||.||++.. .++..+|+|.+...... . .|+.....+ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------~--~e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------A--IEPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------h--hhHHHHHHhhcCCCEEEEEEE
Confidence 3444556677776666 9999999999976 45778888887542111 0 122222212 69999999999
Q ss_pred EEeCCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC-ceEEeccccc
Q 042735 490 CSHARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH-KAHVSDFGIA 544 (667)
Q Consensus 490 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~-~~kl~DFGla 544 (667)
+...+..++||||+++|+|.+.+..... ..|.||||+||+++.++ .+||+|||++
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999999988754321 11349999999999988 9999999999
Q ss_pred ccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
+..... ....|+..|+||| ++.++|||||||++|||+||+.||.............. .......+.
T Consensus 158 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~ 229 (267)
T PHA03390 158 KIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLL----KRQQKKLPF 229 (267)
T ss_pred eecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHH----HhhcccCCc
Confidence 865432 2346899999999 45689999999999999999999863221111111110 111111111
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHHHh
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPT-MQTITQQLLFS 658 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt-~~ev~~~l~~~ 658 (667)
. + .....+.+++.+||+.+|.+||+ ++|++++.|+.
T Consensus 230 ~-~---~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 230 I-K---NVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred c-c---ccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 1 1 12234667888999999999996 69999988874
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=1.9e-27 Score=248.05 Aligned_cols=235 Identities=21% Similarity=0.300 Sum_probs=165.7
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCc
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-ARH 495 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~~~ 495 (667)
...++|+..+.||+|+||.||+|.. .++..+|||++....... ...+.+.+|++++++++|||||++++++.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP--VLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc--chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 4567899999999999999999975 468889999876533221 234568899999999999999999999876 557
Q ss_pred eEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
.++|+||+ +++|.+.+..... ..|.||||+||+++.++.+||+|||+++....
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred EEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 89999998 4688776643221 12349999999999999999999999985432
Q ss_pred CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCC-----------Chhhhh----hhhcc
Q 042735 553 NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILP-----------SPSVIN----MRLDE 610 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-----------~~~~~~----~~~~~ 610 (667)
......|++.|+|||+ +.++|||||||++|||+||+.||........ ...... ....+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd07856 161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR 240 (328)
T ss_pred CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHH
Confidence 2234567889999993 4579999999999999999999753221000 000000 00000
Q ss_pred c---cCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 611 M---LDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 611 ~---~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. .....+.+..+ .......+.+++.+||+.+|++|||+++++.+.|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~ 292 (328)
T cd07856 241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292 (328)
T ss_pred HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence 0 00000000000 001123577888999999999999999999988774
No 358
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=3.6e-27 Score=241.35 Aligned_cols=231 Identities=23% Similarity=0.349 Sum_probs=159.5
Q ss_pred CcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc---CCCCeeEEEEEEEeCCc---
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI---RHRNIVKFYGFCSHARH--- 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~g~~~~~~~--- 495 (667)
|+..+.||+|+||.||+|+... +..+|+|++....... .....+.+|++++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE--GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc--hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 4567889999999999998764 7889999986543221 1234566788777665 59999999999988776
Q ss_pred --eEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccc
Q 042735 496 --SILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 496 --~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
.+++|||+++ +|.+++..... ..|.|+||+||+++.++.+||+|||++...
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999999984 78776543210 123499999999999999999999999876
Q ss_pred cCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh---------hh----
Q 042735 548 KPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM---------RL---- 608 (667)
Q Consensus 548 ~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---------~~---- 608 (667)
..... .....|+..|+||| ++.++|||||||++|||+||++|+............... ..
T Consensus 158 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 158 SFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred cCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 43322 22345788999999 366899999999999999999987633211000000000 00
Q ss_pred -ccccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 609 -DEMLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 609 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.............. .......+.+++.+||+.||++||+++|++++.|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00000000000000 01122456788999999999999999999987654
No 359
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=1.5e-27 Score=239.67 Aligned_cols=219 Identities=26% Similarity=0.389 Sum_probs=166.1
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|+||.||+|.. .++..+|+|++...... ......+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS--QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc--HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 467788999999999999975 46788999987643221 233457889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccc-----cC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 501 EYLKRGSLATNLSND-----AA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 501 ey~~~g~L~~~l~~~-----~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||+++++|.+++... .. ..+.||+|+||+++.++.+|++|||+++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 999999998876441 10 113399999999999999999999999876544
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......|++.|+||| ++.++|+||||+++|||++|+.||..... ...... ......+.... ..
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~---~~~~~~~~~~~---~~ 225 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLRYK---VQRGKYPPIPP---IY 225 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH---HhcCCCCCCch---hh
Confidence 222356889999999 35689999999999999999999853221 111111 11111111111 22
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
...+.+++.+|+..+|++|||+.|+++++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 226 SQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 34577888999999999999999999864
No 360
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=7e-28 Score=249.70 Aligned_cols=235 Identities=20% Similarity=0.275 Sum_probs=160.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
+++|+..+.||+|+||.||+|... +++.+|||++......+. ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG--FPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC--cchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 578999999999999999999864 578899998754322111 1235678999999999999999999875543
Q ss_pred ----ceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccc
Q 042735 495 ----HSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 495 ----~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
..++||||+.+ ++...+.... ...|.||||+||++++++.+||+|||+++
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 46999999985 5554443211 11244999999999999999999999998
Q ss_pred cccCCCC-----------CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh--
Q 042735 546 FLKPDSS-----------NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN-- 605 (667)
Q Consensus 546 ~~~~~~~-----------~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~-- 605 (667)
....... ..+...|++.|+||| ++.++|||||||++|||+||++||..............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 6543211 123346788999999 35679999999999999999999753221100000000
Q ss_pred -----------hhhcc----ccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 606 -----------MRLDE----MLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 606 -----------~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..+.. ......+..... .......+.+++.+|++.+|++|||+.|++.+.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 00000 000001100000 00111357789999999999999999999988765
No 361
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=9.7e-28 Score=244.54 Aligned_cols=224 Identities=24% Similarity=0.394 Sum_probs=168.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|... ++..+|+|.+...... .....+.+.+|++++++++ ||||+++++++...+..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI-KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc-chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 36778889999999999999864 6888999987653221 1223457889999999999 9999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC---
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--- 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--- 551 (667)
||||+++|+|.+.+..... ..|.|+||+||+++.++.++++|||++.......
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 9999999999888754321 1123999999999999999999999998654322
Q ss_pred -----------------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhh
Q 042735 552 -----------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 552 -----------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 608 (667)
.......|+..|+||| ++.++||||||+++||+++|+.|+....... ... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~-~~ 234 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----TFQ-KI 234 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----HHH-HH
Confidence 1123356889999999 3568999999999999999999986433110 000 00
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCH----HHHHHHHHH
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTM----QTITQQLLF 657 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~----~ev~~~l~~ 657 (667)
. ......+... ...+.+++.+||+.+|++|||+ ++++++.||
T Consensus 235 ~-~~~~~~~~~~------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 235 L-KLEYSFPPNF------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred H-hcCCCCCCcc------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 0 0111122111 1246678889999999999999 999988764
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=2.5e-27 Score=249.04 Aligned_cols=243 Identities=19% Similarity=0.273 Sum_probs=169.2
Q ss_pred CHHHHHHHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 042735 412 DYVEIIRAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFC 490 (667)
Q Consensus 412 ~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~ 490 (667)
...++....++|+..+.||+|+||.||+|.. .++..||+|++..... .....+.+.+|++++.+++||||+++++++
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 3445666778999999999999999999975 5688899998865322 122345688999999999999999999988
Q ss_pred EeC------CceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecc
Q 042735 491 SHA------RHSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 491 ~~~------~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DF 541 (667)
... ...++++||+ +++|.+.+.... ...|.||||+||+++.++.+||+||
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecc
Confidence 643 3467788876 778876654321 1124499999999999999999999
Q ss_pred cccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC-----------Chhh
Q 042735 542 GIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP-----------SPSV 603 (667)
Q Consensus 542 Gla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-----------~~~~ 603 (667)
|+++..... .....||..|+||| ++.++|||||||++|||++|+.||........ .+..
T Consensus 165 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 165 GLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241 (345)
T ss_pred ccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999864322 23457899999999 35689999999999999999999753221000 0000
Q ss_pred hhhh----hccccC--CCCCCCCCc--hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 604 INMR----LDEMLD--PRLPPPSPD--VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 604 ~~~~----~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.... ....+. +..+..... .......+.+++.+|++.+|++|||+.+++++.||...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 0000 000000 000000000 00112346788899999999999999999999998743
No 363
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=2.8e-27 Score=241.59 Aligned_cols=232 Identities=21% Similarity=0.297 Sum_probs=164.5
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|++|.||+|... +++.+++|++....... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE--GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc--hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 456678999999999999864 67889999886543221 234578899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|+++ ++.+.+.... ...|.||||+||+++.++.+||+|||.+............
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 9985 7776664421 0113399999999999999999999999876544322333
Q ss_pred ccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh-------hhhccccC------CCC
Q 042735 557 LVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN-------MRLDEMLD------PRL 616 (667)
Q Consensus 557 ~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~-------~~~~~~~~------~~~ 616 (667)
..++..|+|||. +.++|||||||++|||+||+.||.............. .......+ ...
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 568889999993 5679999999999999999998753321100000000 00000000 000
Q ss_pred CCC-----CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 617 PPP-----SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 617 ~~~-----~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+.. ..........+.+++.+||+.+|.+||++.+++.+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 000 00011123467789999999999999999999988663
No 364
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=1.8e-27 Score=239.98 Aligned_cols=224 Identities=21% Similarity=0.273 Sum_probs=159.3
Q ss_pred CCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+|...+.||+|+||.||+|.... +..+++|..+..... ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36677889999999999997644 344555554332111 1112234577899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++++|.+.+.... ...|.|+||+||+++. +.+||+|||+++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999999987664210 0113499999999975 569999999998765443
Q ss_pred CCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.......|++.|+|||+ +.++||||||+++|||++|+.|+..... .... . .......+.. +. .
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~----~~~~-~---~~~~~~~~~~-~~--~ 228 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF----LSVV-L---RIVEGPTPSL-PE--T 228 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHH-H---HHHcCCCCCC-cc--h
Confidence 33345678999999993 5689999999999999999999752211 1111 1 1111111111 11 1
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...++.+++.+||..+|++||++.|++++.|+
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 229 YSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred hcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 22356778889999999999999999988653
No 365
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=7.3e-27 Score=242.19 Aligned_cols=221 Identities=24% Similarity=0.356 Sum_probs=160.3
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|.....||+|+||.||+|.. .++..+++|++...... .....+.+.+|++++++++|||++++++++.+.+..|+|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 44556799999999999976 45788999987643221 22334568899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|+. |++.+.+.... ...|.||||+||+++.++.+||+|||++..... ...
T Consensus 102 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~~ 176 (313)
T cd06633 102 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----ANS 176 (313)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----CCC
Confidence 996 46655543211 112349999999999999999999999875332 234
Q ss_pred ccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..|+..|+|||+ +.++|||||||++|||++|+.|+...... ....... ....+.... .. ..
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~~~~~~--~~~~~~~~~--~~---~~ 246 (313)
T cd06633 177 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIA--QNDSPTLQS--NE---WT 246 (313)
T ss_pred ccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHH--hcCCCCCCc--cc---cC
Confidence 578999999994 34689999999999999999997532210 0000000 000111111 11 11
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|.+||++.+++++.++..
T Consensus 247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 247 DSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 24667888999999999999999999877753
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=2.6e-27 Score=247.61 Aligned_cols=236 Identities=20% Similarity=0.283 Sum_probs=167.2
Q ss_pred CCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----c
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-----H 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-----~ 495 (667)
+|...+.||+|+||.||+|... .+..+|+|++..... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 4677889999999999999865 488899998865321 1233467899999999999999999999998775 7
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||++.......
T Consensus 79 ~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 79 VYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred eEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 8999999984 7877664421 11234999999999999999999999998765443
Q ss_pred ---CCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh---------------h
Q 042735 552 ---SNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN---------------M 606 (667)
Q Consensus 552 ---~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~---------------~ 606 (667)
.......||+.|+|||+ +.++|||||||++|||+||+.||...........+.. .
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 12334568899999993 4579999999999999999999853221000000000 0
Q ss_pred hhccccC---CCCCCCCC-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 RLDEMLD---PRLPPPSP-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 ~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+. ........ ........+.+++.+||+.+|++|||+++++++.|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 0000000 00000000 000112356788999999999999999999999998644
No 367
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=1.1e-27 Score=263.94 Aligned_cols=227 Identities=24% Similarity=0.371 Sum_probs=157.8
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc-
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH- 495 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~- 495 (667)
+-..+|+..+.||+||||.||+++- -+|+.+|||++.-.. ....-....+|+.+++++.|||||+||..+.+...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 4567899999999999999999985 478999999997643 22334568899999999999999999986643211
Q ss_pred --------------------------------------------------------------------------------
Q 042735 496 -------------------------------------------------------------------------------- 495 (667)
Q Consensus 496 -------------------------------------------------------------------------------- 495 (667)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred --------------------------------------eEEEEEecCCCChHHHhccc----------------------
Q 042735 496 --------------------------------------SILIYEYLKRGSLATNLSND---------------------- 515 (667)
Q Consensus 496 --------------------------------------~~lv~ey~~~g~L~~~l~~~---------------------- 515 (667)
+||=||||+.-.+.+.+...
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 23334444443333322211
Q ss_pred ---cCCcccccccCCeeecCCCceEEeccccccccc----C--------------CCCCcccccccccccCCC-------
Q 042735 516 ---AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLK----P--------------DSSNWSALVGTYRYVAPD------- 567 (667)
Q Consensus 516 ---~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~----~--------------~~~~~~~~~Gt~~y~aPE------- 567 (667)
+...|+||||.||++|++..|||+|||+|+... . .....|..+||.-|+|||
T Consensus 713 IH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred HHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 112233999999999999999999999998722 0 011345678999999999
Q ss_pred --CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCC
Q 042735 568 --YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESR 645 (667)
Q Consensus 568 --~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~R 645 (667)
|+.|+|+||+|||++||+.- |+.. ......+...-++.+|.+..........-..++...++.||.+|
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~yP---F~Ts-------MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLYP---FGTS-------MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhcc---CCch-------HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 78899999999999999854 3211 11122233344555555522222233334466778899999999
Q ss_pred CCHHHHHHHHHH
Q 042735 646 PTMQTITQQLLF 657 (667)
Q Consensus 646 Pt~~ev~~~l~~ 657 (667)
||+.|++..-++
T Consensus 863 PtA~eLL~s~ll 874 (1351)
T KOG1035|consen 863 PTATELLNSELL 874 (1351)
T ss_pred CCHHHHhhccCC
Confidence 999999986443
No 368
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=2.2e-27 Score=242.25 Aligned_cols=232 Identities=22% Similarity=0.307 Sum_probs=165.0
Q ss_pred CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+....||+|+||.||+|... +++.+|+|.+..... .....+.+.+|++++++++|||++++++++.+.+..++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE--EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc--cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 455678999999999999875 488899998875431 12234568899999999999999999999999999999999
Q ss_pred ecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 502 YLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 502 y~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|++ ++|.+.+.... ...|.||+|+||+++.++.+||+|||+++...........
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 998 58988775431 0123499999999999999999999999876544333334
Q ss_pred ccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh----------hhhhccc--cCCCCC
Q 042735 557 LVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI----------NMRLDEM--LDPRLP 617 (667)
Q Consensus 557 ~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~----------~~~~~~~--~~~~~~ 617 (667)
..++..|+|||+ +.++|||||||++|||++|+.||............. ....... .+...+
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 556788999993 458999999999999999999975432110000000 0000000 000011
Q ss_pred CCCCc-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 618 PPSPD-----VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 618 ~~~~~-----~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
..... .......+.+++.+||+.+|++||++++++.+.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 00000 00012357789999999999999999999998775
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=1e-26 Score=238.91 Aligned_cols=229 Identities=18% Similarity=0.203 Sum_probs=146.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCCC----ceEEEEecCCCCCCchHHh-------HHHHHHHHHHHHhcCCCCeeEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSK----EFLAVKKFNSPLPSDQIAD-------QKEFFAEIEALTKIRHRNIVKFYGF 489 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~----~~~avk~~~~~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~~~g~ 489 (667)
..|...+.||+|+||.||+|...++ ..+|+|+..........+. ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4688889999999999999987554 3455554322111100000 0122344455667899999999997
Q ss_pred EEeCC----ceEEEEEecCCCChHHHhcc------------------------ccCCcccccccCCeeecCCCceEEecc
Q 042735 490 CSHAR----HSILIYEYLKRGSLATNLSN------------------------DAAAEELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 490 ~~~~~----~~~lv~ey~~~g~L~~~l~~------------------------~~~~~~~dlk~~NiLld~~~~~kl~DF 541 (667)
+.... ..++++|++.. ++.+.+.. .....|.||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 76543 34677887643 33322211 112235699999999999999999999
Q ss_pred cccccccCCC-------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh-hhh
Q 042735 542 GIAKFLKPDS-------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI-NMR 607 (667)
Q Consensus 542 Gla~~~~~~~-------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~-~~~ 607 (667)
|+|+...... .......||+.|+||| |+.++|||||||++|||+||+.||............. ...
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~ 250 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF 250 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH
Confidence 9998654321 1123357999999999 6789999999999999999999986432110000000 000
Q ss_pred hccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 608 LDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
...+.......+ . ....+.+++..||..+|++||+++++.+.+
T Consensus 251 ~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 251 IKRLHEGKIKIK--N---ANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhhhhhhccC--C---CCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111111111111 1 112466788899999999999999998754
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.94 E-value=7.1e-27 Score=234.00 Aligned_cols=216 Identities=25% Similarity=0.345 Sum_probs=163.0
Q ss_pred eecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|+||.||++... +++.+|+|.+....... ......+..|++++++++||||+++++.+..++..++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIK-RKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcc-hHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999865 47889999876543221 2234578999999999999999999999999999999999999999
Q ss_pred hHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccc
Q 042735 508 LATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRY 563 (667)
Q Consensus 508 L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y 563 (667)
|.+.+..... ..|.||||+||+++.++.++|+|||++..............|+..|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY 159 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence 9888754321 1133999999999999999999999998765443333456789999
Q ss_pred cCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhc
Q 042735 564 VAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSC 637 (667)
Q Consensus 564 ~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 637 (667)
+|||. +.++|+||||+++||+++|+.||..... ..... .......+.+... ...+.+++.+|
T Consensus 160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~----~~~~~~~~~~~~~----~~~l~~~i~~~ 227 (250)
T cd05123 160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYE----KILKDPLRFPEFL----SPEARDLISGL 227 (250)
T ss_pred cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHH----HHhcCCCCCCCCC----CHHHHHHHHHH
Confidence 99993 5689999999999999999999853321 11111 1111111111111 12466788899
Q ss_pred cccCCCCCCCH---HHHHHHHHH
Q 042735 638 LDVSPESRPTM---QTITQQLLF 657 (667)
Q Consensus 638 l~~~p~~RPt~---~ev~~~l~~ 657 (667)
|..+|++|||+ .++..+.||
T Consensus 228 l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 228 LQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hcCCHhhCCCcccHHHHHhCCCC
Confidence 99999999999 788877654
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=1.6e-27 Score=250.50 Aligned_cols=235 Identities=20% Similarity=0.304 Sum_probs=166.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc---
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH--- 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~--- 495 (667)
.++|+....||+|+||.||+|+.. ++..+|||++...... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS--AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch--hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 467888899999999999999874 5788999987643221 2234567889999999999999999998876554
Q ss_pred ---eEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 496 ---SILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 496 ---~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
.++|+||+ +++|.+.+.... ...|.||||+||+++.++.+||+|||++.....
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 89999998 568887664422 112449999999999999999999999986543
Q ss_pred CCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-------hhc------
Q 042735 550 DSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-------RLD------ 609 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-------~~~------ 609 (667)
. .....||..|+||| ++.++|||||||++|||+||+.||............... ...
T Consensus 171 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 171 E---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred c---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 2 23457889999999 356899999999999999999998532211000000000 000
Q ss_pred --cccCCCCCCCCCch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 610 --EMLDPRLPPPSPDV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 610 --~~~~~~~~~~~~~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+........... ......+.+++.+||+.+|++|||+.||+++.|+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 00000000000000 0112357789999999999999999999999888643
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94 E-value=2.7e-27 Score=248.51 Aligned_cols=235 Identities=23% Similarity=0.293 Sum_probs=161.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------ 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------ 493 (667)
.+|...+.||+|+||.||+|.. .++..+|+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 5788889999999999999976 5578899998754322 2345688999999999999999999876543
Q ss_pred --------CceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeec-CCCceEEecc
Q 042735 494 --------RHSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLD-LEHKAHVSDF 541 (667)
Q Consensus 494 --------~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld-~~~~~kl~DF 541 (667)
...++||||++ ++|.+.+.... ...|.||||+||+++ +++.+|++||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999998 58876654321 112449999999998 4567899999
Q ss_pred cccccccCCCC---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh--------
Q 042735 542 GIAKFLKPDSS---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV-------- 603 (667)
Q Consensus 542 Gla~~~~~~~~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~-------- 603 (667)
|+++....... ......|+..|+||| ++.++|||||||++|||++|+.||............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99986543211 112346788999999 345899999999999999999998532210000000
Q ss_pred ---hhhhh----ccccCCCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 604 ---INMRL----DEMLDPRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 604 ---~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..... ............+. ......++.+++.+||+.+|++|||+.|++.+.|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 00000 00000000000000 00112346688899999999999999999999998643
No 373
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-28 Score=246.65 Aligned_cols=234 Identities=21% Similarity=0.323 Sum_probs=180.8
Q ss_pred HHcCCcCcceeecccCeEEEEEEeCCCc-eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELPSKE-FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.+.++.....||-|+||+|-.+...+.. .+|.|.+++..-. +.+.++....|-.+|...+.|.||++|-.|.+.+..|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV-dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV-DTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc-chhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 3466777788999999999999876544 4888887765433 2345677889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+.||-|-||++...|+..... ...||||+|+++|.+|-+||.|||+|+.+.....+
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 999999999999888754321 12399999999999999999999999998877666
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
| ++||||.|+||| .+.++|.||+||++|||+||++||...+.+..+..+.. .++. -.+|.....
T Consensus 577 w-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk-Gid~---i~~Pr~I~k----- 646 (732)
T KOG0614|consen 577 W-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK-GIDK---IEFPRRITK----- 646 (732)
T ss_pred e-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh-hhhh---hhcccccch-----
Confidence 5 489999999999 46789999999999999999999986654433322211 1111 112221111
Q ss_pred HHHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhcc
Q 042735 628 ISIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFSY 664 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~~ 664 (667)
...+++.+-+..+|.+|-- ..+|.+|-||....|+-
T Consensus 647 -~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 647 -TATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred -hHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 2334555666788999876 78999999999887764
No 374
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=1.5e-29 Score=259.70 Aligned_cols=300 Identities=25% Similarity=0.420 Sum_probs=137.7
Q ss_pred CcEEeccCCcCc-CCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 5 LRELHLRDNYLT-GLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 5 L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
.+-.|++.|.++ +.+|.....+..++-|.|.+.++. .+|++++.|.+|++|.+++|++.. +-..+.. ..|+.+.+.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhh
Confidence 344555555555 344554455555555555555554 455555555555555555555431 2222222 224444555
Q ss_pred cccccc-cCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 83 NNHFTG-NLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 83 ~n~l~~-~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
.|++.. -+|..+..+..|+.|+|+.|+++ ..|..+...+++-.|+|++|+|..++...|.+++.|-+||||+|++ ..
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL-e~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL-EM 164 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh-hh
Confidence 554432 23444445555555555555544 3344444445555555555555444444444555555555555544 23
Q ss_pred cCccCCCCCCCCEEEccCCcCCC-------------------------CcCccccCCCCcCeeeccCCcccccCCccccC
Q 042735 162 IASNWGKCPKLSTLNVSMNNITR-------------------------SIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGK 216 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 216 (667)
+|+.+..+.+|++|.|++|.+.- .+|.++..|.+|..+|||.|.+. ..|+.+-.
T Consensus 165 LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~ 243 (1255)
T KOG0444|consen 165 LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK 243 (1255)
T ss_pred cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh
Confidence 44444444444444444443311 13333444444444444444443 34444444
Q ss_pred CcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCc-cccchhhhcCCCCCEE
Q 042735 217 LNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI-QELPKELGKLVQLSEL 295 (667)
Q Consensus 217 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~-~~~p~~l~~l~~L~~L 295 (667)
+++|+.|+|++|.++ .+.-..+...+|++|+||.|+++. +|++++.+++|+.|.+.+|++. ..+|+.++++.+|..+
T Consensus 244 l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf 321 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVF 321 (1255)
T ss_pred hhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHH
Confidence 444444444444443 222233333444444444444442 3444555555555544444432 2244444444444444
Q ss_pred ECcCCCCCCcCcccccC
Q 042735 296 ELSHNFLGREIPSQICS 312 (667)
Q Consensus 296 ~l~~n~l~~~ip~~~~~ 312 (667)
..++|.+ .-+|+.+|.
T Consensus 322 ~aanN~L-ElVPEglcR 337 (1255)
T KOG0444|consen 322 HAANNKL-ELVPEGLCR 337 (1255)
T ss_pred Hhhcccc-ccCchhhhh
Confidence 4444443 334444443
No 375
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-27 Score=227.19 Aligned_cols=239 Identities=22% Similarity=0.326 Sum_probs=173.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
+++|+..++||+|+|++|..+++.. .+.+|+|++++....+ .++..-...|-.+..+. +||.+|-++.+|..+..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 5789999999999999999998754 5779999887654432 23334455666666655 5999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
.|.||++||+|.-+.+..+ .....|+|.+|||+|.+|++|++|||+++.--.....
T Consensus 328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence 9999999999964443321 1112399999999999999999999999965444555
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.+++||||.|+||| |.-.+|+|++||+|+||+.|+.||+.+....+.....+.....++...+.-+..- .
T Consensus 408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl----s 483 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL----S 483 (593)
T ss_pred cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee----e
Confidence 67899999999998 7789999999999999999999998655333322222222222222222211111 1
Q ss_pred HHHHHHHHhccccCCCCCC------CHHHHHHHHHHhhhhhc
Q 042735 628 ISIMEVAFSCLDVSPESRP------TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP------t~~ev~~~l~~~~~~~~ 663 (667)
.+...+...-+.+||.+|- -++++..+.+|..+.|+
T Consensus 484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd 525 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD 525 (593)
T ss_pred hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence 1223344566899999884 36788888888776665
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=2.1e-26 Score=260.59 Aligned_cols=125 Identities=26% Similarity=0.309 Sum_probs=104.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|...+.||+|+||.||+|... +++.||||++...... .......+.+|+.++..++|||||++++++......++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI-NKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc-CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 467888999999999999999875 6788999998653221 12334578899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999988764321 12245999999999999999999999986
No 377
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=5.6e-27 Score=241.13 Aligned_cols=245 Identities=22% Similarity=0.316 Sum_probs=170.7
Q ss_pred cCHHHHHHHHc---CCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEE
Q 042735 411 FDYVEIIRAIN---DFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKF 486 (667)
Q Consensus 411 ~~~~~~~~~~~---~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~ 486 (667)
-.|..+.++-- -|..++.||-|+||.|.+++.-+ ...+|.|.+.+...... ......++|-+||+..+.+=||++
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~r-nQvaHVKAERDILAEADn~WVVrL 694 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMR-NQVAHVKAERDILAEADNEWVVRL 694 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhh-hhhhhhhhhhhhHhhcCCcceEEE
Confidence 45666666643 37778889999999999997644 56789998765422211 123457789999999999999999
Q ss_pred EEEEEeCCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEeccc
Q 042735 487 YGFCSHARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 487 ~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
|-.|.+.+.+|.||||++||++...|....+ ..|.||||+|||||.+|++||+|||
T Consensus 695 yySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 695 YYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred EEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecc
Confidence 9999999999999999999999877654322 2245999999999999999999999
Q ss_pred cccccc---------C------CC-----------C----------------CcccccccccccCCC------CCCCchH
Q 042735 543 IAKFLK---------P------DS-----------S----------------NWSALVGTYRYVAPD------YRKKCDV 574 (667)
Q Consensus 543 la~~~~---------~------~~-----------~----------------~~~~~~Gt~~y~aPE------~~~~~DV 574 (667)
++.-+. . +. . .+...+||+.|+||| |+.-+|+
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 996431 0 00 0 012468999999999 6788999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHH-HHHhccccCCC-CCCCHHHHH
Q 042735 575 YSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIME-VAFSCLDVSPE-SRPTMQTIT 652 (667)
Q Consensus 575 ~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Cl~~~p~-~RPt~~ev~ 652 (667)
||.|||||||+.|+.||...........+.++. ..++-....... .+ ..+ |...|...|-. -+--++||.
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~--~~l~~~~~~~ls--~e----~~~li~kLc~sad~RLGkng~d~vK 926 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVINWR--NFLHIPYQGNLS--KE----ALDLIQKLCCSADSRLGKNGADQVK 926 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeeeehh--hccccccccccC--HH----HHHHHHHHhcChhhhhcccchhhhh
Confidence 999999999999999985333222222222221 222322221111 11 122 22345544321 234567899
Q ss_pred HHHHHhhhhhcc
Q 042735 653 QQLLFSLVYFSY 664 (667)
Q Consensus 653 ~~l~~~~~~~~~ 664 (667)
.|.||..+.|+.
T Consensus 927 aHpfFkgIDfss 938 (1034)
T KOG0608|consen 927 AHPFFKGIDFSS 938 (1034)
T ss_pred cCccccccchHh
Confidence 999999999875
No 378
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=1.2e-26 Score=243.68 Aligned_cols=235 Identities=19% Similarity=0.263 Sum_probs=164.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
.++|...+.||+|+||.||+|.. .++..||||++..... .....+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 45788889999999999999975 5688899998754322 2223456889999999999999999999987643
Q ss_pred --ceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 495 --HSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 495 --~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
..++||||+ +++|.+.+.... ...|.||||+||+++.++.+|++|||+++....
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 358999999 678876654321 112449999999999999999999999986543
Q ss_pred CCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh------hhccccC---
Q 042735 550 DSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM------RLDEMLD--- 613 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~------~~~~~~~--- 613 (667)
. .....|++.|+||| ++.++|||||||++||+++|+.||............... .....+.
T Consensus 171 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 171 E---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred C---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2 23356789999999 345799999999999999999998632211000000000 0000000
Q ss_pred -----CCCCCCCCch-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 614 -----PRLPPPSPDV-----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 614 -----~~~~~~~~~~-----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..++...... ......+.+++.+|++.+|++|||+.+++.+.||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 0000000000 0112246788899999999999999999999988754
No 379
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=3.2e-26 Score=239.47 Aligned_cols=234 Identities=19% Similarity=0.276 Sum_probs=159.4
Q ss_pred CCcCcceeecccCeEEEEEEeC-C--CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC----
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP-S--KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHA---- 493 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~-~--~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~---- 493 (667)
+|+..+.||+|+||.||+|+.. . +..+|+|++...... ....+.+.+|++++.+++ |||||++++++...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 78 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK--KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF 78 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence 3667788999999999999864 3 678999987643221 122456889999999995 99999999976432
Q ss_pred CceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
...++++||+. ++|.+.+.... ...|.||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 79 NELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred CcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 45788899886 57877664321 122449999999999999999999999986543
Q ss_pred CCC----CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh-
Q 042735 550 DSS----NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM- 606 (667)
Q Consensus 550 ~~~----~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~- 606 (667)
... ......||+.|+|||+ +.++|||||||++|||++|+.||....... +.......
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 211 1234578999999993 457999999999999999999975322100 00000000
Q ss_pred ---hhccccC--CCCCCCC-C-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 607 ---RLDEMLD--PRLPPPS-P-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 607 ---~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....... ...+... . ........+.+++.+|++.+|++|||+.|++.+.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 0000000 0000000 0 0000123567889999999999999999999998874
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-27 Score=236.57 Aligned_cols=228 Identities=24% Similarity=0.358 Sum_probs=160.0
Q ss_pred CcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCC---chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE-eCCceE
Q 042735 423 FDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPS---DQIADQKEFFAEIEALTKIRHRNIVKFYGFCS-HARHSI 497 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~-~~~~~~ 497 (667)
|-....||+|+|+.||+|. +...+.||||+-.....- ......+...+|.+|...++||.||++|+|+. +.+..+
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 4445679999999999995 566777899864322110 11122345779999999999999999999986 456788
Q ss_pred EEEEecCCCChHHHhccccC--------------------------CcccccccCCeeec---CCCceEEeccccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLD---LEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld---~~~~~kl~DFGla~~~~ 548 (667)
-|.|||+|.+|.-+|..+.. ..+.||||.|||+- ..|.+||+|||++++++
T Consensus 545 TVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMd 624 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMD 624 (775)
T ss_pred eeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence 99999999999877654321 12349999999994 46889999999999987
Q ss_pred CCCCC-------cccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh-hcc
Q 042735 549 PDSSN-------WSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR-LDE 610 (667)
Q Consensus 549 ~~~~~-------~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~-~~~ 610 (667)
.+... .+...||..|++||. +.|+||||.|||+|..+.|+.||+..... ..+.... +..
T Consensus 625 ddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---QdILqeNTIlk 701 (775)
T KOG1151|consen 625 DDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---QDILQENTILK 701 (775)
T ss_pred CCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH---HHHHhhhchhc
Confidence 65321 345789999999992 56999999999999999999999743211 1111100 000
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.....+|+.+ .. ..+...++.+|++..-++|....++..+.++
T Consensus 702 AtEVqFP~KP-vV---sseAkaFIRRCLaYRKeDR~DV~qLA~dpyl 744 (775)
T KOG1151|consen 702 ATEVQFPPKP-VV---SSEAKAFIRRCLAYRKEDRIDVQQLACDPYL 744 (775)
T ss_pred ceeccCCCCC-cc---CHHHHHHHHHHHHhhhhhhhhHHHHccCccc
Confidence 0111122211 11 1134467889999999999998888876554
No 381
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=8.7e-29 Score=254.03 Aligned_cols=290 Identities=26% Similarity=0.374 Sum_probs=218.2
Q ss_pred CCCCCCEEEccCcccc-ccCCccccCCCCCCeeeccccccceeCCCCCccc-ccCEEEcccccccccCCccccCCCCccE
Q 042735 25 NLKSLVKLGLGGNQFR-GSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNL-MLTVLALENNHFTGNLRHNICRNGALER 102 (667)
Q Consensus 25 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 102 (667)
-++-.+-.|+++|.++ +..|.....++++++|.|...++. .+|..++.. .|+.|.+++|++. .+...+..++.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 4677888999999999 689999999999999999999987 688888874 5999999999986 45567788899999
Q ss_pred EEeeCcccc-cccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCc
Q 042735 103 VIVGGNHFR-GPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNN 181 (667)
Q Consensus 103 L~l~~n~~~-~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 181 (667)
+++..|++. .-+|..+..+..|..|||+.|+++ ..|..+...+++.+|+||+|+|....-+.|-++..|-.|+||+|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 999999984 347888999999999999999997 678889999999999999999965544567799999999999999
Q ss_pred CCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccc-ccccCcccccCCCCCCeeeccCCcCCccchh
Q 042735 182 ITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQ-LIGHLPSEIGSLTKLEFLNLSTNRFSSLIPE 260 (667)
Q Consensus 182 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 260 (667)
+. .+|+.+..|..|++|+|++|.+...--..+-.|++|++|.+++.+ -...+|.++..+.+|+.+|||.|.+.. +|+
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPe 239 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPE 239 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc-chH
Confidence 97 577789999999999999997754433444556666666666533 223466666666666666666666653 466
Q ss_pred hhhcccCCCeecCCCccCc----------------------cccchhhhcCCCCCEEECcCCCCC-CcCcccccCCcccc
Q 042735 261 SLGNLLKLHYLDLSKYQFI----------------------QELPKELGKLVQLSELELSHNFLG-REIPSQICSMECCE 317 (667)
Q Consensus 261 ~~~~l~~L~~L~ls~n~~~----------------------~~~p~~l~~l~~L~~L~l~~n~l~-~~ip~~~~~~~~~~ 317 (667)
++-++.+|+.|+||+|+++ ..+|+.+.++++|+.|...+|.+. ..||+.++.+..++
T Consensus 240 cly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le 319 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE 319 (1255)
T ss_pred HHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH
Confidence 6666666666666666542 234555555555555555555443 34555555555444
Q ss_pred cc
Q 042735 318 VF 319 (667)
Q Consensus 318 ~~ 319 (667)
+|
T Consensus 320 vf 321 (1255)
T KOG0444|consen 320 VF 321 (1255)
T ss_pred HH
Confidence 44
No 382
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-26 Score=221.00 Aligned_cols=235 Identities=19% Similarity=0.290 Sum_probs=172.8
Q ss_pred ceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.+|+|+|+.|--+. ..++..+|||++.+. . .-.+.+..+|++++.... |+||++++++|+++...|+|||-|.
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~ 159 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-P---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR 159 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC-C---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence 469999999998875 678899999998764 1 234567899999999886 9999999999999999999999999
Q ss_pred CCChHHHhcccc------------------------CCcccccccCCeeecCCC---ceEEecccccccccCCC------
Q 042735 505 RGSLATNLSNDA------------------------AAEELDISSKNVLLDLEH---KAHVSDFGIAKFLKPDS------ 551 (667)
Q Consensus 505 ~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~---~~kl~DFGla~~~~~~~------ 551 (667)
||.|..+++... ...|.|+||+|||-.... -+|||||.+........
T Consensus 160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 999987765421 223559999999996543 48999999886543221
Q ss_pred -CCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCc-----cCCCCh-hhh-hhhhcccc
Q 042735 552 -SNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVS-----SILPSP-SVI-NMRLDEML 612 (667)
Q Consensus 552 -~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~-----~~~~~~-~~~-~~~~~~~~ 612 (667)
....+.+|+..||||| |+.++|.||+|||+|-|+.|.+||...- |-+... .+. +.....+-
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ 319 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 319 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence 1234568999999999 7889999999999999999999985221 111100 011 11122223
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccC
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYA 665 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~ 665 (667)
+....-|..++.....+..+++..-+..++.+|-++.++++++|+....-++|
T Consensus 320 EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~eka 372 (463)
T KOG0607|consen 320 EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKA 372 (463)
T ss_pred ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhcc
Confidence 33344444444444445566777778899999999999999999876654443
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=2.9e-26 Score=252.97 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=146.2
Q ss_pred HHcCCcCcceeecccCeEEEEEEeCC-----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEE----
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELPS-----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGF---- 489 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~---- 489 (667)
..++|+..+.||+|+||.||+|.... +..+|||++..... .+.+..| .+.+..|.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 45789999999999999999998744 57899998754211 1111111 1222222233222211
Q ss_pred --EEeCCceEEEEEecCCCChHHHhcccc--------------------------------------------CCccccc
Q 042735 490 --CSHARHSILIYEYLKRGSLATNLSNDA--------------------------------------------AAEELDI 523 (667)
Q Consensus 490 --~~~~~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------~~~~~dl 523 (667)
+......++||||+++|+|.+++.... ...|.||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 245678999999999999987764321 1123499
Q ss_pred ccCCeeecC-CCceEEecccccccccCCC-CCcccccccccccCCC-C---------------------------CCCch
Q 042735 524 SSKNVLLDL-EHKAHVSDFGIAKFLKPDS-SNWSALVGTYRYVAPD-Y---------------------------RKKCD 573 (667)
Q Consensus 524 k~~NiLld~-~~~~kl~DFGla~~~~~~~-~~~~~~~Gt~~y~aPE-~---------------------------~~~~D 573 (667)
||+|||++. ++.+||+|||+|+.+.... .......||+.||||| | ..++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999995 6899999999998654322 2234568999999999 2 23459
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccC----CCChhhhhhhhccccCCCCCCCCCc----hHHHHHHHHHHHHhccccCCCCC
Q 042735 574 VYSFRVLALEVIKGKHPRGFVSSI----LPSPSVINMRLDEMLDPRLPPPSPD----VQGKLISIMEVAFSCLDVSPESR 645 (667)
Q Consensus 574 V~sfGvvl~ElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Cl~~~p~~R 645 (667)
||||||++|||+++..|++..... ................+........ .........+++.+|++.||++|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 999999999999987764311000 0000000000001111111000000 00001123478889999999999
Q ss_pred CCHHHHHHHHHHhhhh
Q 042735 646 PTMQTITQQLLFSLVY 661 (667)
Q Consensus 646 Pt~~ev~~~l~~~~~~ 661 (667)
||+.|+++|.||....
T Consensus 442 ~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 442 ISAKAALAHPYFDREG 457 (566)
T ss_pred CCHHHHhCCcCcCCCC
Confidence 9999999999986543
No 384
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=9.1e-27 Score=209.19 Aligned_cols=167 Identities=23% Similarity=0.389 Sum_probs=132.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHH-HhcCCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEAL-TKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~~~g~~~~~~~~~l 498 (667)
++......||+|+||.|-+-++ .+|...|||++...... ..+++..+|+++. +....|.+|+|||.+.+....|+
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~---q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS---QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh---HHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 3445567799999999988875 67899999999876542 3466788999875 45679999999999999999999
Q ss_pred EEEecCCCChHHHhc-----------------------------cccCCcccccccCCeeecCCCceEEecccccccccC
Q 042735 499 IYEYLKRGSLATNLS-----------------------------NDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 499 v~ey~~~g~L~~~l~-----------------------------~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
.||.|.- ||..+.. +.-...|.|+||+|||++.+|.+|+||||++..+..
T Consensus 123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 9998863 4543221 111123459999999999999999999999998764
Q ss_pred CCCCcccccccccccCCC----------CCCCchHHHHHHHHHHHHhCCCCCC
Q 042735 550 DSSNWSALVGTYRYVAPD----------YRKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE----------~~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
.- ..+.-.|--.||||| |+-||||||+|+++.||.+++.|++
T Consensus 202 Si-Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 202 SI-AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred hh-HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 32 223356788999999 7789999999999999999999975
No 385
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.93 E-value=5.4e-26 Score=238.32 Aligned_cols=231 Identities=22% Similarity=0.310 Sum_probs=164.1
Q ss_pred CCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-C-----CCeeEEEEEEEeCC
Q 042735 422 DFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-H-----RNIVKFYGFCSHAR 494 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~~~g~~~~~~ 494 (667)
+|++.+.||+|.||+|-+|. ..+++.||||+++... ....+-..|+.+|..++ | -|+|+++++|...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 67889999999999999996 5668999999987532 33445667999999887 3 58999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecC--CCceEEeccccccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDL--EHKAHVSDFGIAKF 546 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~--~~~~kl~DFGla~~ 546 (667)
+.+||+|.+.. +|++++..... ..|-||||+||||-+ ...+||+|||.|..
T Consensus 262 HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 262 HLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999998864 78887765421 123499999999964 34799999999987
Q ss_pred ccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCC---------------------------
Q 042735 547 LKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGF--------------------------- 593 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~--------------------------- 593 (667)
..... .+.+-+..|-||| |+.+.||||||||+.||.||.+=|..
T Consensus 341 ~~q~v---ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~ 417 (586)
T KOG0667|consen 341 ESQRV---YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK 417 (586)
T ss_pred cCCcc---eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 55332 2456778999999 89999999999999999999653310
Q ss_pred ----Ccc--CCCChhhhhh------------hhcc-ccCCCCCCCCCc----hH-HHHHHHHHHHHhccccCCCCCCCHH
Q 042735 594 ----VSS--ILPSPSVINM------------RLDE-MLDPRLPPPSPD----VQ-GKLISIMEVAFSCLDVSPESRPTMQ 649 (667)
Q Consensus 594 ----~~~--~~~~~~~~~~------------~~~~-~~~~~~~~~~~~----~~-~~~~~~~~~~~~Cl~~~p~~RPt~~ 649 (667)
... ..+....... .... ..+.+.|+.... .. ..-..+++++.+|++.||.+|+|..
T Consensus 418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~ 497 (586)
T KOG0667|consen 418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA 497 (586)
T ss_pred cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence 000 0000000000 0000 011111211111 01 1224678999999999999999999
Q ss_pred HHHHHHHHhhhh
Q 042735 650 TITQQLLFSLVY 661 (667)
Q Consensus 650 ev~~~l~~~~~~ 661 (667)
|+++|.|+....
T Consensus 498 qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 498 QALNHPFLTGTS 509 (586)
T ss_pred HHhcCccccccc
Confidence 999999987443
No 386
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.93 E-value=2.2e-26 Score=218.67 Aligned_cols=239 Identities=21% Similarity=0.283 Sum_probs=165.2
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-C----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-S----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH- 492 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~- 492 (667)
-...|+....||+|.||.||+|... + +..+|+|+++........ .....||+.+++.++|||||.+..++..
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi--S~SAcREiaL~REl~h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI--SMSACREIALLRELKHPNVISLVKVFLSH 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc--CHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence 3467888899999999999999532 2 236999999765432222 2457799999999999999999999887
Q ss_pred CCceEEEEEecCCCChHHHhccccCC-----------------------------cccccccCCeeecCC----CceEEe
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAAA-----------------------------EELDISSKNVLLDLE----HKAHVS 539 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~~-----------------------------~~~dlk~~NiLld~~----~~~kl~ 539 (667)
+...++++||.+. +|...++.+... .|.|+||+|||+..+ |.|||+
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence 7789999999986 777666433221 133999999999877 999999
Q ss_pred cccccccccCCCC---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC----CCChhhhh
Q 042735 540 DFGIAKFLKPDSS---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI----LPSPSVIN 605 (667)
Q Consensus 540 DFGla~~~~~~~~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~----~~~~~~~~ 605 (667)
|||++|.....-. ....++-|..|-||| |+.+.||||.|||..||+|-++-|.....- .+.....-
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 9999998754322 123456799999999 899999999999999999987655321110 01110000
Q ss_pred hhhccccC----CCCCCC--CCchH------------------------HHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042735 606 MRLDEMLD----PRLPPP--SPDVQ------------------------GKLISIMEVAFSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 606 ~~~~~~~~----~~~~~~--~~~~~------------------------~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l 655 (667)
.++.+++. ..+|.- .|+.. .......++....+..||-+|-|+++.+++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 11111110 001000 00000 0011245677789999999999999999998
Q ss_pred HHhhh
Q 042735 656 LFSLV 660 (667)
Q Consensus 656 ~~~~~ 660 (667)
+|-..
T Consensus 339 yF~~d 343 (438)
T KOG0666|consen 339 YFTED 343 (438)
T ss_pred ccccC
Confidence 88654
No 387
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=4.8e-27 Score=243.78 Aligned_cols=226 Identities=26% Similarity=0.381 Sum_probs=169.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
-++|+....+|+|.||.||||+. ++++..|||.++-... .+.+...+|+-+++..+|||||.|+|.+...+..|+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC----ccccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 36788889999999999999975 6788999998865322 123346689999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
+||||.+|+|.+..+... ...|+|||-.|||+.+.|.+|++|||.+......-...
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Kr 169 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKR 169 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhh
Confidence 999999999977543211 12356999999999999999999999998766554455
Q ss_pred ccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
..+.||++||||| |.+++|||+.|+...|+..-++|-. ...+.....-+ .....+| +...+...
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf---dlhpmr~l~Lm-TkS~~qp---p~lkDk~k 242 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF---DLHPMRALFLM-TKSGFQP---PTLKDKTK 242 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc---ccchHHHHHHh-hccCCCC---CcccCCcc
Confidence 6789999999999 7889999999999999988888732 11111111100 0111111 11112223
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHH
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLL 656 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~ 656 (667)
....+.+++..|+-++|.+|||++.++++.+
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~h~f 273 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPF 273 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhheecee
Confidence 3445778888999999999999998877544
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.2e-26 Score=237.20 Aligned_cols=214 Identities=22% Similarity=0.302 Sum_probs=160.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
++.|+....+|.|+|+.|.++.. .+++..+||++.+... .-.+|+.++... .||||+++.+.+.++.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 56677777899999999999865 5678899999876421 123567666655 5999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc-----------------------CCcccccccCCeee-cCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLL-DLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLl-d~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+|||++.+|.+.+.+.... ...+.|+||+|||+ +..+++||+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 9999999998866553321 12234999999999 59999999999999987654
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..+-+=|..|.||| |++++|+|||||+||||++|+.|+.... ...... ..+..+...... .
T Consensus 470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P----~~~ei~---~~i~~~~~s~~v------S 536 (612)
T KOG0603|consen 470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHP----AGIEIH---TRIQMPKFSECV------S 536 (612)
T ss_pred hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCC----chHHHH---HhhcCCcccccc------C
Confidence 22345678899998 8999999999999999999999975321 111111 111111111111 1
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....+++..||+.||.+||+|.++..+.|+
T Consensus 537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 537 DEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 234567779999999999999999999999
No 389
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-26 Score=232.97 Aligned_cols=221 Identities=21% Similarity=0.302 Sum_probs=166.2
Q ss_pred cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 426 KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.+++|+|.||+||-|.. ++|+.||||++.+....... ..+..+|++||.+++||.||.+-..|+..+..+.|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq--esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ--ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch--HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence 46799999999999975 56899999999876554332 3568899999999999999999999999999999999987
Q ss_pred CCChHHHhcccc-------------------------CCcccccccCCeeecCC---CceEEecccccccccCCCCCccc
Q 042735 505 RGSLATNLSNDA-------------------------AAEELDISSKNVLLDLE---HKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 505 ~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~---~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|.-|.-.|.... ...|.|+||+|||+... -.+||||||+||+..+.. ...+
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-FRrs 725 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-FRRS 725 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-hhhh
Confidence 654544443221 11233999999999643 258999999999987543 3456
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
++|||.|+||| |...-|+||.|||+|--+.|..||....++.. ++-++....+...+.+.....
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd----------QIQNAaFMyPp~PW~eis~~A 795 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND----------QIQNAAFMYPPNPWSEISPEA 795 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH----------HhhccccccCCCchhhcCHHH
Confidence 89999999999 77888999999999999999999874433211 111122211122222233345
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
++++..-++..-++|-|....+.+.|...
T Consensus 796 idlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 796 IDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred HHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 67777888999999999999998887653
No 390
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.93 E-value=1.6e-25 Score=222.40 Aligned_cols=197 Identities=17% Similarity=0.183 Sum_probs=144.3
Q ss_pred ccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCChHH
Q 042735 432 GRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSLAT 510 (667)
Q Consensus 432 g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~ 510 (667)
|.||.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 88999999976 567889999876421 23455566666779999999999999999999999999999988
Q ss_pred Hhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCC
Q 042735 511 NLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAP 566 (667)
Q Consensus 511 ~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aP 566 (667)
.+.... ...|.||||+||+++.++.+|++|||.+...... .....++..|+||
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aP 151 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAP 151 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCC
Confidence 764321 1123499999999999999999999988765432 1234567789999
Q ss_pred CC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhcccc
Q 042735 567 DY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDV 640 (667)
Q Consensus 567 E~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~ 640 (667)
|+ +.++||||+||++|||++|+.|+..... .. .......++... ...+.+++.+|++.
T Consensus 152 E~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~------~~----~~~~~~~~~~~~------~~~~~~li~~~l~~ 215 (237)
T cd05576 152 EVGGISEETEACDWWSLGAILFELLTGKTLVECHPS------GI----NTHTTLNIPEWV------SEEARSLLQQLLQF 215 (237)
T ss_pred cccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch------hc----ccccccCCcccC------CHHHHHHHHHHccC
Confidence 93 5689999999999999999987542110 00 000111122111 12456788899999
Q ss_pred CCCCCCCH-----HHHHHHHH
Q 042735 641 SPESRPTM-----QTITQQLL 656 (667)
Q Consensus 641 ~p~~RPt~-----~ev~~~l~ 656 (667)
||++||++ +|++.+.|
T Consensus 216 dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 216 NPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred CHHHhcCCCccchHHHHcCCC
Confidence 99999996 67766654
No 391
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.92 E-value=9.5e-26 Score=213.47 Aligned_cols=226 Identities=20% Similarity=0.306 Sum_probs=168.5
Q ss_pred HcCCcCc-ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe----
Q 042735 420 INDFDAK-YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH---- 492 (667)
Q Consensus 420 ~~~f~~~-~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~---- 492 (667)
++||.+. ++||-|-.|.|..+.. ++++.+|.|++.+. ....+|+++.-.. .|||||.++++|..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS---------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC---------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 4555443 4699999999999865 56788999987542 2345788876555 49999999998864
Q ss_pred CCceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecC---CCceEEecccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDL---EHKAHVSDFGI 543 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~---~~~~kl~DFGl 543 (667)
.+.+.+|||.|+||+|+..++..+. ..|.||||+|+|... +-.+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 3567899999999999988865421 113499999999963 55789999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
|+.... .....+.|-||+|+||| |+..+|+||+||++|-|+.|.+||--.......+... +.+......
T Consensus 211 AK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk----~rI~~gqy~ 285 (400)
T KOG0604|consen 211 AKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----RRIRTGQYE 285 (400)
T ss_pred ccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH----hHhhccCcc
Confidence 997543 23455678899999999 7889999999999999999999985333221122211 222333444
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
-+.+++........++++..+..+|++|-|.+|++.+.|-..
T Consensus 286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 455666666666778888899999999999999999988654
No 392
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-25 Score=195.78 Aligned_cols=166 Identities=23% Similarity=0.398 Sum_probs=131.5
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+|+..+.||+|.||+||+|+. .+++.||.|+++-.... ........+||-+++.++|+|||++++....++..-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd--egvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC--CCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 455667899999999999975 56789999988643222 223356889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcc-------------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSN-------------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~-------------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||.. +|..+... .....+.|+||+|.|+..+|+.|++|||+++...-.....+
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 99973 33222211 01122459999999999999999999999998765544556
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCC
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHP 590 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p 590 (667)
+.+-|..|.+|+ |+...|+||-|||+.|+.....|
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence 667899999998 67889999999999999985555
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.92 E-value=8.4e-25 Score=235.24 Aligned_cols=236 Identities=15% Similarity=0.187 Sum_probs=152.3
Q ss_pred HcCCcCcceeecccCeEEEEEEe-----------------CCCceEEEEecCCCCCCchH----------HhHHHHHHHH
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-----------------PSKEFLAVKKFNSPLPSDQI----------ADQKEFFAEI 472 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-----------------~~~~~~avk~~~~~~~~~~~----------~~~~~~~~E~ 472 (667)
.++|+..++||+|+||.||+|.. ..++.||||++......... ...+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 57899999999999999999964 23457999997642211000 0112345677
Q ss_pred HHHHhcCCCCe-----eEEEEEEEe--------CCceEEEEEecCCCChHHHhcccc-----------------------
Q 042735 473 EALTKIRHRNI-----VKFYGFCSH--------ARHSILIYEYLKRGSLATNLSNDA----------------------- 516 (667)
Q Consensus 473 ~~l~~l~H~ni-----v~~~g~~~~--------~~~~~lv~ey~~~g~L~~~l~~~~----------------------- 516 (667)
..+.+++|.++ ++++|+|.. .+..++||||+++|+|.++++...
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 78888877665 677887753 356899999999999988875311
Q ss_pred -------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC-cccccccccccCCCCC-
Q 042735 517 -------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-WSALVGTYRYVAPDYR- 569 (667)
Q Consensus 517 -------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-~~~~~Gt~~y~aPE~~- 569 (667)
...|.||||+||+++.++.+||+|||+++........ .....+|+.|+|||..
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 0112399999999999999999999999765432211 1123458899999931
Q ss_pred ---------------------------CCchHHHHHHHHHHHHhCCC-CCCCCccCCCC----hhhhhhh-hccccCCCC
Q 042735 570 ---------------------------KKCDVYSFRVLALEVIKGKH-PRGFVSSILPS----PSVINMR-LDEMLDPRL 616 (667)
Q Consensus 570 ---------------------------~~~DV~sfGvvl~ElltG~~-p~~~~~~~~~~----~~~~~~~-~~~~~~~~~ 616 (667)
.+.||||+||++|||++|.. |+......... ....... ........+
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~ 463 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF 463 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence 13699999999999999985 54321111000 0000000 000001111
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCC---CCCCCHHHHHHHHHHhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSP---ESRPTMQTITQQLLFSL 659 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p---~~RPt~~ev~~~l~~~~ 659 (667)
+. .. .......+++.+++..+| .+|+|++|+++|.||.-
T Consensus 464 ~~-~d---~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 464 SL-LD---RNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cc-cc---ccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 10 11 111235567778888765 68999999999999843
No 394
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=9.1e-25 Score=217.13 Aligned_cols=212 Identities=27% Similarity=0.430 Sum_probs=157.9
Q ss_pred cCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCChHHH
Q 042735 433 RHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSLATN 511 (667)
Q Consensus 433 ~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~~ 511 (667)
+||.||+|.... +..+|+|++........ .+.+.+|++.+++++|+||++++|++......++++||+++++|.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK---RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH---HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999998764 88899999865432211 46799999999999999999999999999999999999999999887
Q ss_pred hccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCC
Q 042735 512 LSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD 567 (667)
Q Consensus 512 l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE 567 (667)
+..... ..|.|++|+||+++.++.++++|||.+....... ......|+..|++||
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE 156 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPE 156 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHH
Confidence 754321 1133999999999999999999999998765432 223456889999999
Q ss_pred ------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccC
Q 042735 568 ------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVS 641 (667)
Q Consensus 568 ------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~ 641 (667)
++.++||||||+++||+++|+.|+..... ...... ............. ......+.+++.+||..+
T Consensus 157 ~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~---~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~ 228 (244)
T smart00220 157 VLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ---LLELFK----KIGKPKPPFPPPE-WKISPEAKDLIRKLLVKD 228 (244)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---HHHHHH----HHhccCCCCcccc-ccCCHHHHHHHHHHccCC
Confidence 46799999999999999999999753211 011111 1111111111000 001235778889999999
Q ss_pred CCCCCCHHHHHHHHH
Q 042735 642 PESRPTMQTITQQLL 656 (667)
Q Consensus 642 p~~RPt~~ev~~~l~ 656 (667)
|++||++.+++++.+
T Consensus 229 p~~Rp~~~~~~~~~~ 243 (244)
T smart00220 229 PEKRLTAEEALQHPF 243 (244)
T ss_pred chhccCHHHHhhCCC
Confidence 999999999998654
No 395
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=3.9e-27 Score=231.00 Aligned_cols=291 Identities=32% Similarity=0.451 Sum_probs=177.0
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeecccccccee----------------
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGS---------------- 66 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~---------------- 66 (667)
.+|+.|++++|.+.. .|.+++.+..|+.|+..+|+++ ..|+.++++.+|..|++.+|++...
T Consensus 114 ~~l~~l~~s~n~~~e-l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~ 191 (565)
T KOG0472|consen 114 ISLVKLDCSSNELKE-LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCN 191 (565)
T ss_pred hhhhhhhccccceee-cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccc
Confidence 455666666666654 3444555666666666666665 4555555555555555555555433
Q ss_pred ------CCCCCccc-ccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCcc-CCCCCCCcEEEccCCcccccc
Q 042735 67 ------IPPSVGNL-MLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKC-LRNCPNLVRISLEGNNMRGTI 138 (667)
Q Consensus 67 ------~p~~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~-l~~l~~L~~L~L~~n~~~~~~ 138 (667)
+|+.++.+ .|+-|+|..|.+. .+| .|.++..|..+.++.|++. .+|.. ..+++.|..|||..|+++ ..
T Consensus 192 ~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 192 SNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred hhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 33333332 2444444444443 222 3444444444444444444 23333 336777777777777776 45
Q ss_pred chhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCC----------------------------------
Q 042735 139 SEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITR---------------------------------- 184 (667)
Q Consensus 139 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------------------- 184 (667)
|+.++.+.+|.+||+|+|.++ .+|.+++++ +|+.|-+-+|.+..
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 667777777777777777775 356666777 77777777776510
Q ss_pred ------------------------------CcCccccCC---CCcCeeeccCCccc-----------------------c
Q 042735 185 ------------------------------SIPLEIGNL---STLNEFDLSLNHIV-----------------------G 208 (667)
Q Consensus 185 ------------------------------~~p~~~~~l---~~L~~L~L~~n~l~-----------------------~ 208 (667)
.+|.+...- .-....+++.|++. +
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~is 425 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKIS 425 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccc
Confidence 000000000 00222334444432 2
Q ss_pred cCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCC-----------------------ccchhhhhcc
Q 042735 209 KIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFS-----------------------SLIPESLGNL 265 (667)
Q Consensus 209 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----------------------~~~p~~~~~l 265 (667)
.+|..+..+++|..|+|++|-+. .+|..++.+..||.||++.|+|. ...|..+.++
T Consensus 426 fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm 504 (565)
T KOG0472|consen 426 FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNM 504 (565)
T ss_pred cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhh
Confidence 34455667788889999888776 68888888888999999888764 2234447788
Q ss_pred cCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 266 LKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 266 ~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
.+|..||+.+|. ...+|..+++|.+|++|++++|+|.
T Consensus 505 ~nL~tLDL~nNd-lq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 505 RNLTTLDLQNND-LQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhcceeccCCCc-hhhCChhhccccceeEEEecCCccC
Confidence 889999998777 5678888999999999999999985
No 396
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=7.5e-26 Score=209.01 Aligned_cols=235 Identities=20% Similarity=0.314 Sum_probs=159.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------- 492 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------- 492 (667)
+.|+....||+|.||.||+|+.+ .++.||+|++.-... .........+|++++..++|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene--KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc--ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 34556678999999999999864 466789987542111 11122356799999999999999999988753
Q ss_pred -CCceEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEeccccccc
Q 042735 493 -ARHSILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 493 -~~~~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
....|+|+++|+. +|+-.|..... ..|.|+||.|+||+.+|.+||+|||+++.
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 2358999999985 67666554311 12449999999999999999999999986
Q ss_pred ccCCC----CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCC-----------------CccCC
Q 042735 547 LKPDS----SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGF-----------------VSSIL 598 (667)
Q Consensus 547 ~~~~~----~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~-----------------~~~~~ 598 (667)
+.... ..++..+-|..|.+|| |+.+.|||.-|||+.||+||.+-+.. ...++
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 64322 1234456699999998 78899999999999999999876431 11122
Q ss_pred CChhhhhhhhccccC-CCCCCCC-CchHHHHH------HHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 599 PSPSVINMRLDEMLD-PRLPPPS-PDVQGKLI------SIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 599 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~------~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+...... +...+. +.++... ......+. ..++++...+..||.+|+.+.+++.+.||-..
T Consensus 254 P~~d~lp--L~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 254 PNVDNLP--LYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred CCcccch--HHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 2111100 000000 0011000 00011111 34567778899999999999999999998654
No 397
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.90 E-value=5.4e-24 Score=208.24 Aligned_cols=224 Identities=20% Similarity=0.287 Sum_probs=160.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH- 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~- 492 (667)
-.++.....+-+|.||+||+|.+++ .+.+.||.++.... .-....|..|.-.+..+.|||+..+.|++.+
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS---~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS---QIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc---HHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 3456667778999999999996543 34577777654322 1223468899999999999999999998865
Q ss_pred CCceEEEEEecCCCChHHHhc-----cccCCc---------------------------ccccccCCeeecCCCceEEec
Q 042735 493 ARHSILIYEYLKRGSLATNLS-----NDAAAE---------------------------ELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~-----~~~~~~---------------------------~~dlk~~NiLld~~~~~kl~D 540 (667)
....+.+|.|+.-|+|..+|. +...++ |-||.++|++||+.-.+||+|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltD 439 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTD 439 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEecc
Confidence 467889999999999999887 211111 129999999999999999999
Q ss_pred ccccccccCCCC-Ccc-cccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDSS-NWS-ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~~-~~~-~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
=.++|-+-+.+- ... ..-....||+|| |..++|||||||+||||+| |+.|+...+. ..... .+
T Consensus 440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP-----fEm~~---yl 511 (563)
T KOG1024|consen 440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP-----FEMEH---YL 511 (563)
T ss_pred chhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-----HHHHH---HH
Confidence 999996544321 111 112346899998 8899999999999999998 8999753321 11110 11
Q ss_pred cC-CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 612 LD-PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 612 ~~-~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.| .++..|. . +.-++..+|.-||+..|++||+++|++.-|..-
T Consensus 512 kdGyRlaQP~-N---CPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 KDGYRLAQPF-N---CPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hccceecCCC-C---CcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 12 1222221 1 122566788899999999999999999887653
No 398
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=1.3e-26 Score=227.39 Aligned_cols=303 Identities=29% Similarity=0.432 Sum_probs=209.4
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
..++.|+.++|++.. .|..+..+.+|..|+.+.|.+. .+|++++.+..|..|+..+|+++ ++|+.+.+ ..|..|++
T Consensus 91 ~~l~~l~vs~n~ls~-lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~ 167 (565)
T KOG0472|consen 91 EALKSLNVSHNKLSE-LPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDL 167 (565)
T ss_pred HHHHHhhcccchHhh-ccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhc
Confidence 457789999999975 6888899999999999999998 78999999999999999999998 56666665 45888888
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCcccc---------------------ccch
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRG---------------------TISE 140 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~---------------------~~~~ 140 (667)
.+|++....|..+. +..|+.++...|.+. .+|+.++.|.+|..|+|..|++.. .+|.
T Consensus 168 ~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpa 245 (565)
T KOG0472|consen 168 EGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPA 245 (565)
T ss_pred cccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHH
Confidence 88887644333333 555555555555443 344455555555555555555431 2333
Q ss_pred h-hhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCccccc----------
Q 042735 141 A-FGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGK---------- 209 (667)
Q Consensus 141 ~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~---------- 209 (667)
. ...+.++.+|||.+|++ .+.|+.++.+.+|++|++++|.|++ +|.++++| .|+.|-+.+|-+..+
T Consensus 246 e~~~~L~~l~vLDLRdNkl-ke~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~ 322 (565)
T KOG0472|consen 246 EHLKHLNSLLVLDLRDNKL-KEVPDEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQ 322 (565)
T ss_pred HHhcccccceeeecccccc-ccCchHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHH
Confidence 3 34778888888888887 4678888888888888888888874 66778887 777777777654211
Q ss_pred ----------------------------CCcccc---CCcc--------------------------cceeeccccccc-
Q 042735 210 ----------------------------IPKEFG---KLNS--------------------------LTKLILRGNQLI- 231 (667)
Q Consensus 210 ----------------------------~p~~~~---~l~~--------------------------L~~L~L~~n~l~- 231 (667)
.+..|. .+.+ ....+++.|++.
T Consensus 323 ~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~e 402 (565)
T KOG0472|consen 323 EVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCE 402 (565)
T ss_pred HHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhh
Confidence 000000 0001 233444444432
Q ss_pred ----------------------ccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCc----------
Q 042735 232 ----------------------GHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI---------- 279 (667)
Q Consensus 232 ----------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~---------- 279 (667)
+.+|..+..+++|..|+|++|.+.. +|..++.+..|+.|+++.|+|-
T Consensus 403 lPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq 481 (565)
T KOG0472|consen 403 LPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLSFNRFRMLPECLYELQ 481 (565)
T ss_pred hhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhh-cchhhhhhhhhheecccccccccchHHHhhHH
Confidence 2445566788999999999998875 6999999999999999999751
Q ss_pred ------------cccch-hhhcCCCCCEEECcCCCCCCcCcccccCCcc
Q 042735 280 ------------QELPK-ELGKLVQLSELELSHNFLGREIPSQICSMEC 315 (667)
Q Consensus 280 ------------~~~p~-~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~ 315 (667)
+.++. .+..|.+|.+||+.+|.+ ..||..++.+..
T Consensus 482 ~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdl-q~IPp~Lgnmtn 529 (565)
T KOG0472|consen 482 TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDL-QQIPPILGNMTN 529 (565)
T ss_pred HHHHHHhccccccccChHHhhhhhhcceeccCCCch-hhCChhhccccc
Confidence 22332 366777777777777776 456666655543
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.89 E-value=4.5e-24 Score=227.60 Aligned_cols=215 Identities=24% Similarity=0.361 Sum_probs=154.1
Q ss_pred CcCcceeecccCeE-EEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEE
Q 042735 423 FDAKYCIGSGRHGS-VYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 423 f~~~~~lg~g~~g~-vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ 500 (667)
|...+++|.|..|+ ||+|.+. ++.||||++... ...-..+||..++.-+ |||||++||.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44556688998775 7999884 568999987432 2223568999998876 999999999999999999999
Q ss_pred EecCCCChHHHhcccc----------------------------CCcccccccCCeeecC---C--CceEEecccccccc
Q 042735 501 EYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDL---E--HKAHVSDFGIAKFL 547 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~---~--~~~kl~DFGla~~~ 547 (667)
|.|.- +|.+.+.... ...|.||||+||||+. + .+|+|+|||+++.+
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 99974 6766665420 0113499999999986 3 47899999999988
Q ss_pred cCCCCC---cccccccccccCCCC------CCCchHHHHHHHHHHHHhC-CCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 548 KPDSSN---WSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKG-KHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 548 ~~~~~~---~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
..+... .....||-+|+|||. ..++|++|+|||+|..+|| .+||+-...-. ..+. .....-...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl----~~~~~L~~L 735 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANIL----TGNYTLVHL 735 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhh----cCccceeee
Confidence 766443 345679999999993 4578999999999999996 89987321100 0000 000000001
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
.+.+++ ...+++.+++..+|..||++.+|+.|++|
T Consensus 736 ~~~~d~-----eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 736 EPLPDC-----EAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred ccCchH-----HHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 111111 34577789999999999999999998776
No 400
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=2e-21 Score=232.54 Aligned_cols=297 Identities=23% Similarity=0.248 Sum_probs=165.7
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALEN 83 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~ 83 (667)
+|+.|++.+|.+.. .|..| .+.+|+.|+|++|++. .+|..+..+++|+.|+|++|...+.+|......+|+.|+|++
T Consensus 590 ~Lr~L~~~~~~l~~-lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 590 KLRLLRWDKYPLRC-MPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSD 666 (1153)
T ss_pred ccEEEEecCCCCCC-CCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecC
Confidence 35555555555543 24433 3556666666666665 455556666666666666654434455422224566666666
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.....+|..+..+.+|+.|++++|..-+.+|..+ ++++|+.|+|++|......|.. ..+|+.|++++|.+. .+|
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP 741 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFP 741 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-ccc
Confidence 65555566666666666666666654444455443 5666666666666543333322 345666666666653 344
Q ss_pred ccCCCCCCCCEEEccCCcCC-------CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcc
Q 042735 164 SNWGKCPKLSTLNVSMNNIT-------RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS 236 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~-------~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 236 (667)
..+ .+++|+.|.+.++... ...+..+...++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|.
T Consensus 742 ~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 742 SNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred ccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 332 3444444444432211 01111122234667777777766666777777777777777777654455665
Q ss_pred cccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCc
Q 042735 237 EIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSME 314 (667)
Q Consensus 237 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~ 314 (667)
.+ ++++|+.|++++|.....+|.. ..+|+.|++++|.+ ..+|.++..+++|+.|++++|.-...+|..+..+.
T Consensus 821 ~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i-~~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~ 893 (1153)
T PLN03210 821 GI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGI-EEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLK 893 (1153)
T ss_pred CC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCC-ccChHHHhcCCCCCEEECCCCCCcCccCccccccc
Confidence 54 5677777777766544444432 24566777776664 35676777777777777776555455655544443
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=3.1e-21 Score=186.99 Aligned_cols=181 Identities=34% Similarity=0.547 Sum_probs=147.2
Q ss_pred eecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC
Q 042735 429 IGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 429 lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~ 507 (667)
||+|++|.||++.... +..+++|++....... ..+.+.+|++.+++++|++++++++++......++++||+++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 6899999999998754 8889999986532211 24579999999999999999999999999999999999999999
Q ss_pred hHHHhccc--cCC-----------------------cccccccCCeeecC-CCceEEecccccccccCCCCCcccccccc
Q 042735 508 LATNLSND--AAA-----------------------EELDISSKNVLLDL-EHKAHVSDFGIAKFLKPDSSNWSALVGTY 561 (667)
Q Consensus 508 L~~~l~~~--~~~-----------------------~~~dlk~~NiLld~-~~~~kl~DFGla~~~~~~~~~~~~~~Gt~ 561 (667)
|.+++... ... .|.|++|.||+++. ++.++|+|||.+..............+..
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 99887643 111 12399999999999 89999999999987654322223356788
Q ss_pred cccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHH
Q 042735 562 RYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVA 634 (667)
Q Consensus 562 ~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (667)
.|++||. +.++|+|++|++++|+ ..+.+++
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~~~~l 194 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PELKDLI 194 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHHHHHH
Confidence 9999983 3579999999999998 2456778
Q ss_pred HhccccCCCCCCCHHHHHHHH
Q 042735 635 FSCLDVSPESRPTMQTITQQL 655 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~ev~~~l 655 (667)
..|++.+|++||+++++++++
T Consensus 195 ~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 195 RKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHhhCCcccCcCHHHHhhCC
Confidence 899999999999999998753
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=9.8e-23 Score=185.97 Aligned_cols=234 Identities=20% Similarity=0.332 Sum_probs=165.9
Q ss_pred HcCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC--c
Q 042735 420 INDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR--H 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~--~ 495 (667)
+++|+..+.+|+|.|+.||.|. ..+.+.++||.++.. ..+.+.+|+.++..++ |||||++++...++. .
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 4677777889999999999996 466778999987642 2456889999999999 999999999998764 5
Q ss_pred eEEEEEecCCCChHHHhcc---------------------ccCCcccccccCCeeecC-CCceEEecccccccccCCCCC
Q 042735 496 SILIYEYLKRGSLATNLSN---------------------DAAAEELDISSKNVLLDL-EHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~---------------------~~~~~~~dlk~~NiLld~-~~~~kl~DFGla~~~~~~~~~ 553 (667)
..+|+||+.+-+....... .....|.|+||.|+++|. .-..++.|.|+|.+..+...
T Consensus 110 paLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e- 188 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE- 188 (338)
T ss_pred chhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce-
Confidence 6799999999886543221 123346699999999994 56799999999998876543
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC----------CCChhhhh--hhhccccCC
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI----------LPSPSVIN--MRLDEMLDP 614 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~----------~~~~~~~~--~~~~~~~~~ 614 (667)
....+.+..|--|| |+..-|+|||||++.+|+..+.||-..... ........ ....-.+||
T Consensus 189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCCh
Confidence 44556677888898 678899999999999999999997421110 00000000 000001121
Q ss_pred CCCC--------C-----CCchHHH-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 615 RLPP--------P-----SPDVQGK-LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 615 ~~~~--------~-----~~~~~~~-~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.... + .++.... ..+.++++..-+..|-.+|||+.|.+.+.+|..+.
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 1100 0 0010111 13566777788999999999999999999997654
No 403
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=199.37 Aligned_cols=231 Identities=24% Similarity=0.353 Sum_probs=161.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC--C----CeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH--R----NIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~~~g~~~~ 492 (667)
..+|.+...+|+|.||.|-++-. ..+..||||+++.. .+..+..+-|++++.++.+ | -+|++.+||..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 46788888999999999999853 45789999998653 2344567789999999942 2 27888889999
Q ss_pred CCceEEEEEecCCCChHHHhccccCC--------------------------cccccccCCeeecC--------------
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAAA--------------------------EELDISSKNVLLDL-------------- 532 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~~--------------------------~~~dlk~~NiLld~-------------- 532 (667)
.++.++|+|.+ |-|+.+++...... .|.||||+|||+-+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999999976 34788887653211 13399999999832
Q ss_pred ------CCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCcc----
Q 042735 533 ------EHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSS---- 596 (667)
Q Consensus 533 ------~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~---- 596 (667)
+..+||.|||-|....+. .++++.|..|-||| +...+||||+||||+|+.||..-|.....
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL 318 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL 318 (415)
T ss_pred eeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHH
Confidence 335889999999875443 35678999999999 57899999999999999999875532110
Q ss_pred -----C-CCChh--hhhhhhcc-----ccCC-----------CCCCCCC------chHHHHHHHHHHHHhccccCCCCCC
Q 042735 597 -----I-LPSPS--VINMRLDE-----MLDP-----------RLPPPSP------DVQGKLISIMEVAFSCLDVSPESRP 646 (667)
Q Consensus 597 -----~-~~~~~--~~~~~~~~-----~~~~-----------~~~~~~~------~~~~~~~~~~~~~~~Cl~~~p~~RP 646 (667)
+ .+.+. +.....+. -+|. ...++.+ ....+..++.+++.+.+..||.+|+
T Consensus 319 aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri 398 (415)
T KOG0671|consen 319 AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRI 398 (415)
T ss_pred HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccc
Confidence 0 01110 00000000 0110 0000000 1123455788999999999999999
Q ss_pred CHHHHHHHHHHhh
Q 042735 647 TMQTITQQLLFSL 659 (667)
Q Consensus 647 t~~ev~~~l~~~~ 659 (667)
|+.|++++.||..
T Consensus 399 Tl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 399 TLREALSHPFFAR 411 (415)
T ss_pred cHHHHhcCHHhhc
Confidence 9999999999864
No 404
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=2.8e-21 Score=215.00 Aligned_cols=265 Identities=25% Similarity=0.274 Sum_probs=209.4
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALEN 83 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~ 83 (667)
+-..|+|++|.|+. +|..+. ++|+.|++.+|+|+. +|. .+++|++|+|++|+|+ .+|... .+|+.|+|++
T Consensus 202 ~~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~lp--~sL~~L~Ls~ 271 (788)
T PRK15387 202 GNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVLP--PGLLELSIFS 271 (788)
T ss_pred CCcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCcc--cccceeeccC
Confidence 35679999999986 566654 589999999999984 665 2689999999999998 456532 4699999999
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.++. +|..+ .+|+.|++++|+++. +|. ..++|+.|+|++|++++. |.. ..+|+.|++++|.+.+ +|
T Consensus 272 N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLTH-LPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchhh-hhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCC---cccccccccccCcccc-cc
Confidence 99874 34322 578899999999985 454 357899999999999864 432 3468899999999864 55
Q ss_pred ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCC
Q 042735 164 SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTK 243 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 243 (667)
.. ..+|+.|+|++|++++ +|.. .++|+.|++++|++.. +|.. ..+|+.|++++|.+.+ +|.. .++
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~ 403 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSE 403 (788)
T ss_pred cc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccC
Confidence 42 2589999999999985 5543 3578889999999985 5643 3579999999999985 5543 368
Q ss_pred CCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCccccc
Q 042735 244 LEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQIC 311 (667)
Q Consensus 244 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~ 311 (667)
|+.|++++|++++ +|... .+|+.|++++|++. .+|..++.+++|+.|++++|++++.+|..+.
T Consensus 404 L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 404 LKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred CCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 9999999999987 56543 46788999999965 7999999999999999999999988776553
No 405
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=9.4e-21 Score=226.69 Aligned_cols=277 Identities=21% Similarity=0.222 Sum_probs=159.3
Q ss_pred CCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEee
Q 042735 28 SLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVG 106 (667)
Q Consensus 28 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 106 (667)
+|+.|++.+|.+. .+|..| .+.+|+.|+|.+|++. .+|..+.. .+|+.|+|++|.....+| .+..+++|+.|+++
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEec
Confidence 3555555555443 344444 2445555555555543 23333332 235555555443333333 24444555555555
Q ss_pred CcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCc
Q 042735 107 GNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 107 ~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
+|.....+|..+.++++|+.|++++|.....+|..+ .+++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~l 740 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EF 740 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cc
Confidence 544444445555555555555555543323333322 4455555555555433333321 234555555555543 23
Q ss_pred CccccCCCCcCeeeccCCccc-------ccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccch
Q 042735 187 PLEIGNLSTLNEFDLSLNHIV-------GKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIP 259 (667)
Q Consensus 187 p~~~~~l~~L~~L~L~~n~l~-------~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 259 (667)
|..+ .+++|+.|++..+... ...+..+...++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|
T Consensus 741 P~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 741 PSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 3322 3455555555442211 0111112234689999999998888899999999999999999986555677
Q ss_pred hhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 260 ESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 260 ~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
..+ ++++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+..+..+..+
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L 874 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFL 874 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEE
Confidence 766 7899999999999877777753 468999999999985 688877776665544
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.84 E-value=1.7e-20 Score=184.16 Aligned_cols=167 Identities=30% Similarity=0.529 Sum_probs=137.0
Q ss_pred CcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
|+..+.||+|++|.||+|.... +..+|+|.+...... ...+.+.+|++.+.+++|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence 4566789999999999998765 788999998654321 235678999999999999999999999999999999999
Q ss_pred ecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC-CCcc
Q 042735 502 YLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-SNWS 555 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-~~~~ 555 (667)
|+++++|.+++..... ..+.|++++||+++.++.++|+|||.+....... ....
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9999999888754321 1123999999999999999999999998765432 1223
Q ss_pred cccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCC
Q 042735 556 ALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 556 ~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~ 592 (667)
...|+..|++||. +.++|||+||++++||++|+.||.
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 4568889999994 358999999999999999999985
No 407
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=4e-20 Score=205.86 Aligned_cols=247 Identities=26% Similarity=0.331 Sum_probs=196.0
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|++++|+|+.+ |. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.++ .+|..+ ..|+.|+|+
T Consensus 222 ~~L~~L~L~~N~Lt~L-P~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp--~~L~~L~Ls 290 (788)
T PRK15387 222 AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP--SGLCKLWIF 290 (788)
T ss_pred cCCCEEEccCCcCCCC-CC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch--hhcCEEECc
Confidence 3689999999999974 54 36899999999999994 5643 578999999999987 455533 358899999
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCcc
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEI 162 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 162 (667)
+|+++. +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|.+++ +|. ...+|+.|+|++|++.+ +
T Consensus 291 ~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~---lp~~Lq~LdLS~N~Ls~-L 357 (788)
T PRK15387 291 GNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPT---LPSGLQELSVSDNQLAS-L 357 (788)
T ss_pred CCcccc-cccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-ccc---cccccceEecCCCccCC-C
Confidence 999984 4432 3689999999999986 3432 2468889999999985 443 22589999999999975 5
Q ss_pred CccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCC
Q 042735 163 ASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLT 242 (667)
Q Consensus 163 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 242 (667)
|.. ..+|+.|++++|.+.. +|.. ..+|+.|+|++|.+.+ +|.. ..+|+.|++++|++.+ +|.. ..
T Consensus 358 P~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~ 422 (788)
T PRK15387 358 PTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PS 422 (788)
T ss_pred CCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hh
Confidence 543 3578889999999985 5543 3579999999999985 5543 3679999999999985 6653 35
Q ss_pred CCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcC
Q 042735 243 KLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKL 289 (667)
Q Consensus 243 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l 289 (667)
+|+.|++++|+++. +|..+.++++|+.|++++|++.+..|..+..+
T Consensus 423 ~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 423 GLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred hhhhhhhccCcccc-cChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 78899999999985 79999999999999999999998888877444
No 408
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.83 E-value=8e-23 Score=200.69 Aligned_cols=287 Identities=21% Similarity=0.191 Sum_probs=199.8
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccc-cccceeCCCCCccc-ccCEEEc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFE-NNLSGSIPPSVGNL-MLTVLAL 81 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~~-~L~~L~L 81 (667)
...+|.|..|+|+.++|.+|+.+++|++|||++|+|+.+-|++|.+|.+|..|-+.+ |+|+...-..|+.+ .|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 456788999999998888999999999999999999988999999999887777766 88875444556664 4888888
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
.-|++.......+..+.++..|.+..|.+..+-...+..+..++.+.+..|.+-. .. +|+.|.= +...
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dC---nL~wla~----~~a~ 215 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DC---NLPWLAD----DLAM 215 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----cc---ccchhhh----HHhh
Confidence 8888887777777777888888888887775555577777788888777776321 11 1222100 1122
Q ss_pred cCccCCCCCCCCEEEccCCcCCCCcCccccC-CCCcCeeeccCCcccccCCc-cccCCcccceeecccccccccCccccc
Q 042735 162 IASNWGKCPKLSTLNVSMNNITRSIPLEIGN-LSTLNEFDLSLNHIVGKIPK-EFGKLNSLTKLILRGNQLIGHLPSEIG 239 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~ 239 (667)
.|..+++.....-..+.++++....+..|.. +..+..-..+.+...+..|. .|..|++|++|+|++|+++++-+.+|.
T Consensus 216 ~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe 295 (498)
T KOG4237|consen 216 NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFE 295 (498)
T ss_pred chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhc
Confidence 3444455555555555555554433333321 11222212222333334443 477888888888888888877777888
Q ss_pred CCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCC
Q 042735 240 SLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFL 302 (667)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l 302 (667)
++..+++|.|..|++.......|.++..|+.|+|.+|+++...|..|..+.+|.+|++-.|++
T Consensus 296 ~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 296 GAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred chhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 888888888888888776667778888888888888888888888888888888888887766
No 409
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=5.9e-22 Score=213.53 Aligned_cols=282 Identities=29% Similarity=0.302 Sum_probs=183.1
Q ss_pred EeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccccccc
Q 042735 8 LHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFT 87 (667)
Q Consensus 8 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~ 87 (667)
|+|++|.+. . ....++.+|++|....|++... -...++|+.|+.++|.++. +-..+...+|++++++.|+++
T Consensus 183 ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~-~~~~p~p~nl~~~dis~n~l~ 254 (1081)
T KOG0618|consen 183 LDLRYNEME-V--LDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTT-LDVHPVPLNLQYLDISHNNLS 254 (1081)
T ss_pred eecccchhh-h--hhhhhccchhhhhhhhcccceE----EecCcchheeeeccCccee-eccccccccceeeecchhhhh
Confidence 777777765 1 2345677777777777776532 2245678888888887763 333344456899999999988
Q ss_pred ccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCC
Q 042735 88 GNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWG 167 (667)
Q Consensus 88 ~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 167 (667)
+ +|.+++.+.+|+.+.+..|++. .+|..+..+.+|+.|....|.+. .+|.....+++|++|+|..|.+....+..+.
T Consensus 255 ~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~ 331 (1081)
T KOG0618|consen 255 N-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLA 331 (1081)
T ss_pred c-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHh
Confidence 4 4588999999999999999885 56777777888888888888886 5666677788888888888887543332233
Q ss_pred CCCC-CCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCe
Q 042735 168 KCPK-LSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEF 246 (667)
Q Consensus 168 ~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 246 (667)
.+.. |+.|+.+.|++....-..=..++.|+.|++.+|++++.+-+.+.++++|+.|+|++|++.......+.++..|+.
T Consensus 332 v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~Lee 411 (1081)
T KOG0618|consen 332 VLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEE 411 (1081)
T ss_pred hhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHH
Confidence 3332 555555555554322222233456666666666666666556666666666666666665333345566666666
Q ss_pred eeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 247 LNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 247 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
|+||+|+++. +|+++.++..|++|....|++ ..+| ++..++.|+.+|++.|+++
T Consensus 412 L~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l-~~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 412 LNLSGNKLTT-LPDTVANLGRLHTLRAHSNQL-LSFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred Hhcccchhhh-hhHHHHhhhhhHHHhhcCCce-eech-hhhhcCcceEEecccchhh
Confidence 6666666654 456666666666666655553 3455 5556666666666666654
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1e-20 Score=177.14 Aligned_cols=225 Identities=20% Similarity=0.293 Sum_probs=151.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEE-EEEeCCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYG-FCSHARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g-~~~~~~~~ 496 (667)
.+.|++.+.+|+|.||.+-.++++ +.+.+++|.+..+.. .+++|.+|...--.+. |.|||.-|+ .|...+..
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 356788889999999999999875 467788898776532 3567999988766665 999998886 45667788
Q ss_pred EEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeec--CCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLD--LEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld--~~~~~kl~DFGla~~~~~~~ 551 (667)
+.++||++.|+|...+..... ..|.|||.+|||+- +..++|+||||..+.....-
T Consensus 98 vF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 899999999999876654322 12459999999993 44589999999997643221
Q ss_pred CCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 552 SNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
...--+..|-||| ....+|||.|||++|-++||+.||.. .++...+-...+....-..++.|...
T Consensus 178 ---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-a~~~d~~Y~~~~~w~~rk~~~~P~~F 253 (378)
T KOG1345|consen 178 ---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-ASIMDKPYWEWEQWLKRKNPALPKKF 253 (378)
T ss_pred ---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-hhccCchHHHHHHHhcccCccCchhh
Confidence 1223455688887 25678999999999999999999873 22222221111111122223333222
Q ss_pred CchHHHHHHHHHHHHhccccCCCCC---CCHHHHHHHHH
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESR---PTMQTITQQLL 656 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~R---Pt~~ev~~~l~ 656 (667)
... ....+++..+-+..+|++| .++......+|
T Consensus 254 ~~f---s~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 254 NPF---SEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred ccc---CHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 111 1234555567788888888 44444444444
No 411
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=8e-20 Score=204.85 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=105.5
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALEN 83 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~ 83 (667)
+...|+++++.++. +|..+ .++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~-~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACI--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP-DTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCc-CCccc--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh-ccccEEECcC
Confidence 45678888887775 35443 256888888888887 4565553 47888888888776 4555432 2477777777
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.+. .+|..+. .+|+.|++++|+++. +|..+. ++|+.|+|++|++++. |..+. .+|+.|++++|.+.. +|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~L-P~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTL-PAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccC-cccch--hhHHHHHhcCCcccc-CC
Confidence 7765 3444432 355666666665552 343332 3555555555555532 22111 244555555555432 23
Q ss_pred ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccccc
Q 042735 164 SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLI 231 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 231 (667)
..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|.+. .+|..+ .++|+.|++++|.++
T Consensus 321 ~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt 380 (754)
T PRK15370 321 ETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT 380 (754)
T ss_pred ccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC
Confidence 221 1344555555554443 332221 34444444444443 223222 134444444444443
No 412
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.80 E-value=1.8e-20 Score=179.84 Aligned_cols=231 Identities=22% Similarity=0.333 Sum_probs=153.6
Q ss_pred CcCcceeecccCeEEEEE-EeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------Cc
Q 042735 423 FDAKYCIGSGRHGSVYRA-ELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------RH 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~-~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------~~ 495 (667)
|.....+|.|.- .|..| ..-.+++||+|+...+... ....++..+|..++..+.|+||++++.++... .+
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCcccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 333445666655 34444 2345788999998766322 23456778999999999999999999998653 46
Q ss_pred eEEEEEecCCCChHHHhcc----------------------ccCCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 496 SILIYEYLKRGSLATNLSN----------------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~----------------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
.|+|||||.. +|...+.. .....+.||||+||++..+..+||.|||+|+....+ -.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-~~ 173 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-FM 173 (369)
T ss_pred HHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-cc
Confidence 7999999974 55443321 112335699999999999999999999999875544 23
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccC---------C--CChhhh--------h---
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI---------L--PSPSVI--------N--- 605 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~---------~--~~~~~~--------~--- 605 (667)
.+-.+.|..|-||| |.+.+||||.||++.||++|+.-|.....+ . +.+.-. .
T Consensus 174 mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~ 253 (369)
T KOG0665|consen 174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVE 253 (369)
T ss_pred cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhh
Confidence 45678899999999 678899999999999999997543211000 0 000000 0
Q ss_pred -------hhhcccc-CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 606 -------MRLDEML-DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 606 -------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+ |..++.......-......+++.++|..+|++|-+++++++|.++.
T Consensus 254 ~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 254 NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0000000 1111111111111122345778899999999999999999999886
No 413
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=4e-21 Score=179.71 Aligned_cols=233 Identities=24% Similarity=0.340 Sum_probs=158.2
Q ss_pred CCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----Cc
Q 042735 422 DFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----RH 495 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~~ 495 (667)
|.+..+.||-|+||.||-+.. ++|+.||.|++..... ....-+.+.+|++.+..++|.|+...++..... .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq--~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ--NLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHH--HHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 344567899999999999975 6789999999865322 233457899999999999999999998877543 35
Q ss_pred eEEEEEecCCCChHHHhccc------------------------cCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSND------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
+|.+.|.|.. +|.+.+-.. +...+.||||.|.|+..+...||||||+||..+.+.
T Consensus 132 iYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 132 LYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 6777787763 555443221 112345999999999999999999999999866554
Q ss_pred C-CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC---------CCChhhhhhh------h
Q 042735 552 S-NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI---------LPSPSVINMR------L 608 (667)
Q Consensus 552 ~-~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~---------~~~~~~~~~~------~ 608 (667)
. .++..+-|-+|.||| |+.+.||||.|||+.|++.++.-|.....+ ...+..+.++ .
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 3 345566788999999 788999999999999999887554321111 1111111111 0
Q ss_pred ccccCCCCCCCC--------CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 609 DEMLDPRLPPPS--------PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 609 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..++.....++. ... ..-.+...+....+..||++|-+.++.+.+++..
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~-~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPD-DKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HHhhccCCCCCCccceeeecCCc-ccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 111211111110 000 0111233455567899999999999998887654
No 414
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.79 E-value=6.4e-20 Score=188.15 Aligned_cols=172 Identities=23% Similarity=0.333 Sum_probs=134.1
Q ss_pred HHHcCCcCcceeecccCeEEEEEEeCCC-ceEEEEecCCCCCCch--HHh--HHHHHHHHHHHHhcC---CCCeeEEEEE
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAELPSK-EFLAVKKFNSPLPSDQ--IAD--QKEFFAEIEALTKIR---HRNIVKFYGF 489 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~-~~~avk~~~~~~~~~~--~~~--~~~~~~E~~~l~~l~---H~niv~~~g~ 489 (667)
....+|...+.+|+|+||.|+.|.++.+ ..|+||.+.+..-..+ .++ ....-.||+||+.++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 3456788899999999999999987654 5677887655322111 111 123457999999998 9999999999
Q ss_pred EEeCCceEEEEEec-CCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 490 CSHARHSILIYEYL-KRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 490 ~~~~~~~~lv~ey~-~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
|++++..||+||-- ++-+|++++..+. ...|+|||-+||++|.+|-+||.|||-|
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 99999999999964 3447777664321 1224599999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCC
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPR 591 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~ 591 (667)
...+... ..+++||.+|.||| | ...-|||++||+||.++..+.||
T Consensus 718 a~~ksgp--fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 718 AYTKSGP--FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred hhhcCCC--cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 8766443 45789999999999 3 34679999999999999988886
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.79 E-value=3e-19 Score=168.64 Aligned_cols=125 Identities=18% Similarity=0.286 Sum_probs=88.1
Q ss_pred ccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccC
Q 042735 524 SSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI 597 (667)
Q Consensus 524 k~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~ 597 (667)
||+|||++.++.+|+ ||+++...... ..||+.||||| |+.++|||||||++|||+||+.||......
T Consensus 38 kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~ 110 (176)
T smart00750 38 KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL 110 (176)
T ss_pred CcccEeEcCccceee--ccceEeecccc-----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 999999999999999 99998764322 36899999999 578999999999999999999997532211
Q ss_pred CCChhhhhhhhccccCCCCCCCCCchHHHH--HHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 598 LPSPSVINMRLDEMLDPRLPPPSPDVQGKL--ISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. .......... .+..+.......... ..+.+++.+||+.+|++|||+.|++++++...
T Consensus 111 ~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 111 S---AILEILLNGM-PADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred c---HHHHHHHHHh-ccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 1 1111111111 111111111111111 25788999999999999999999999998764
No 416
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.79 E-value=9.9e-22 Score=193.08 Aligned_cols=274 Identities=20% Similarity=0.226 Sum_probs=175.1
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEee
Q 042735 27 KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVG 106 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 106 (667)
++-..|+|..|+|+.+.|.+|..+++||.|||++|+|+..-|..|.. +..+..|.+.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~G-----------------------L~~l~~Lvly 123 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKG-----------------------LASLLSLVLY 123 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhh-----------------------hHhhhHHHhh
Confidence 34567777788887777777777888888888888777666665554 3333333332
Q ss_pred C-cccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC--
Q 042735 107 G-NHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT-- 183 (667)
Q Consensus 107 ~-n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-- 183 (667)
+ |+|+......|.++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+...--.+|..+..++++.+..|.+.
T Consensus 124 g~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 124 GNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred cCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc
Confidence 2 4444333344555555666666666665555556666666666666666554332335566666666666555521
Q ss_pred ----------CCcCccccCCCCcCeeeccCCcccccCCcccc-CCcccceeecccccccccCc-ccccCCCCCCeeeccC
Q 042735 184 ----------RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFG-KLNSLTKLILRGNQLIGHLP-SEIGSLTKLEFLNLST 251 (667)
Q Consensus 184 ----------~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~ 251 (667)
...|..++.........+.++++..+-+..|. .+.++..-..+.+...+.-| ..|.+|++|+.|+|++
T Consensus 204 CnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsn 283 (498)
T KOG4237|consen 204 CNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSN 283 (498)
T ss_pred cccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCC
Confidence 12334455555555555666665544443332 22233222223333333334 4699999999999999
Q ss_pred CcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccccccc
Q 042735 252 NRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVFCTIT 323 (667)
Q Consensus 252 N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~~~~~ 323 (667)
|.++.+-+.+|.++..++.|.|..|++...-...|..+..|++|+|++|+|+.-.|..+-.+..+..++.++
T Consensus 284 N~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~ 355 (498)
T KOG4237|consen 284 NKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLS 355 (498)
T ss_pred CccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehcc
Confidence 999999999999999999999999998766677889999999999999999887776665554444443333
No 417
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=5.4e-21 Score=206.20 Aligned_cols=288 Identities=27% Similarity=0.288 Sum_probs=182.3
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+.+|+.|....|++..+. -.-++|+.|+.++|.++...+ -..-.+|++++++.|+++ .+|.++.. .+|+.++
T Consensus 198 ~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 198 LANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALN 270 (1081)
T ss_pred ccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEec
Confidence 456667777777765431 234667777777777762221 122446777777777776 45555555 4577777
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCC-CCEEECcCCccC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLN-LTFLDISDNNFF 159 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~ 159 (667)
..+|++ ..+|..+....+|+.|.+..|.+.. +|.....++.|++|+|..|++...++..+..+.. |..|+.+.|.+.
T Consensus 271 ~n~N~l-~~lp~ri~~~~~L~~l~~~~nel~y-ip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 271 ANHNRL-VALPLRISRITSLVSLSAAYNELEY-IPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS 348 (1081)
T ss_pred ccchhH-HhhHHHHhhhhhHHHHHhhhhhhhh-CCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc
Confidence 777777 3566667777777777777777763 4555667777888888888776554444444443 566666666654
Q ss_pred CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCccccc
Q 042735 160 GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIG 239 (667)
Q Consensus 160 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 239 (667)
....-.=..++.|+.|.+.+|.++...-+.+.+.++|+.|+|++|++.......+.+|..|+.|+||+|+++ .+|.++.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHH
Confidence 322111123456777777777776655445667777777777777766444445667777777777777775 5667777
Q ss_pred CCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCC
Q 042735 240 SLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNF 301 (667)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~ 301 (667)
.+..|++|...+|++.. .| .+..+++|+.+|++.|++....-......++|++||+++|.
T Consensus 428 ~~~~L~tL~ahsN~l~~-fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 428 NLGRLHTLRAHSNQLLS-FP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhhhHHHhhcCCceee-ch-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 77777777777777764 35 56667777777777776643322222233677777777775
No 418
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.78 E-value=8.3e-19 Score=196.73 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=194.9
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEee
Q 042735 27 KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVG 106 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 106 (667)
.+...|+|++++++ .+|..+ .++|+.|+|++|+|+ .+|..+. .+|+.|+|++|.++. +|..+. .+|+.|+++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~I--p~~L~~L~Ls~N~Lt-sLP~~l~-~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACI--PEQITTLILDNNELK-SLPENLQ-GNIKTLYANSNQLTS-IPATLP--DTIQEMELS 249 (754)
T ss_pred cCceEEEeCCCCcC-cCCccc--ccCCcEEEecCCCCC-cCChhhc-cCCCEEECCCCcccc-CChhhh--ccccEEECc
Confidence 56789999999998 577765 368999999999998 5666554 479999999999984 555443 479999999
Q ss_pred CcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCc
Q 042735 107 GNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 107 ~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
+|++. .+|..+. .+|+.|+|++|+++. +|..+. .+|+.|++++|++.+ +|..+. ++|+.|++++|.++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 99998 5676554 589999999999985 555443 589999999999874 555433 478999999999985 5
Q ss_pred CccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhccc
Q 042735 187 PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLL 266 (667)
Q Consensus 187 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 266 (667)
|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .++|+.|+|++|.++.. |..+. .
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~L-P~~l~--~ 388 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALTNL-PENLP--A 388 (754)
T ss_pred Ccccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCCCC-CHhHH--H
Confidence 54432 689999999999885 566553 78999999999987 567655 36899999999999864 65554 3
Q ss_pred CCCeecCCCccCccccchhh----hcCCCCCEEECcCCCCCC
Q 042735 267 KLHYLDLSKYQFIQELPKEL----GKLVQLSELELSHNFLGR 304 (667)
Q Consensus 267 ~L~~L~ls~n~~~~~~p~~l----~~l~~L~~L~l~~n~l~~ 304 (667)
.|+.|++++|++. .+|..+ +.++.+..|++.+|++..
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 6899999999976 566544 445888999999999863
No 419
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.77 E-value=1.1e-19 Score=184.10 Aligned_cols=231 Identities=20% Similarity=0.278 Sum_probs=157.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC------CCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR------HRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~~~g~~~~~ 493 (667)
+.|.+....|+|-|+.|.+|.. ..+..||||++... +.. .+.=.+|+++|.+|. --|.++|+..|...
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 4577777789999999999975 45778999998652 222 345568999999983 45789999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc---------------------------CCcccccccCCeeecCC-CceEEecccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA---------------------------AAEELDISSKNVLLDLE-HKAHVSDFGIAK 545 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~---------------------------~~~~~dlk~~NiLld~~-~~~kl~DFGla~ 545 (667)
++++||+|-+. -+|.+.|..-. ...|-||||+|||+.+. ..+||||||-|.
T Consensus 507 nHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 507 NHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred ceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccc
Confidence 99999999765 36766664211 01123999999999865 568999999998
Q ss_pred cccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCC------------ccCCCCh------
Q 042735 546 FLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFV------------SSILPSP------ 601 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~------------~~~~~~~------ 601 (667)
...... .+-..-+..|-||| |+..-|+||.||+|||+.||+.-|... ..-.+..
T Consensus 586 ~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgq 663 (752)
T KOG0670|consen 586 FASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQ 663 (752)
T ss_pred cccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcc
Confidence 755332 22233456899999 889999999999999999998543200 0000000
Q ss_pred ------------------hhhh-hhhc--cccCC------CC---CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 042735 602 ------------------SVIN-MRLD--EMLDP------RL---PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTI 651 (667)
Q Consensus 602 ------------------~~~~-~~~~--~~~~~------~~---~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev 651 (667)
.+.. .... ..+.| .+ +.-+.+....+..+.++...|+..||++|-|..|.
T Consensus 664 F~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqA 743 (752)
T KOG0670|consen 664 FKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQA 743 (752)
T ss_pred hhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHH
Confidence 0000 0000 00011 00 00112233456678889999999999999999999
Q ss_pred HHHHHHhh
Q 042735 652 TQQLLFSL 659 (667)
Q Consensus 652 ~~~l~~~~ 659 (667)
++|.|+..
T Consensus 744 L~HpFi~~ 751 (752)
T KOG0670|consen 744 LKHPFITE 751 (752)
T ss_pred hcCCcccC
Confidence 99998753
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.77 E-value=1.2e-19 Score=210.92 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=111.0
Q ss_pred HhcCC-CCeeEEEEEE-------EeCCceEEEEEecCCCChHHHhcccc-------------------------CCcccc
Q 042735 476 TKIRH-RNIVKFYGFC-------SHARHSILIYEYLKRGSLATNLSNDA-------------------------AAEELD 522 (667)
Q Consensus 476 ~~l~H-~niv~~~g~~-------~~~~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~d 522 (667)
++++| +||++++++| .+.+..+.++||+ +++|.+++.... ...|.|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 34556 6888888887 2334567788987 559998885421 112349
Q ss_pred cccCCeeecC-------------------CCceEEecccccccccCCC----------------CCcccccccccccCCC
Q 042735 523 ISSKNVLLDL-------------------EHKAHVSDFGIAKFLKPDS----------------SNWSALVGTYRYVAPD 567 (667)
Q Consensus 523 lk~~NiLld~-------------------~~~~kl~DFGla~~~~~~~----------------~~~~~~~Gt~~y~aPE 567 (667)
|||+||||+. ++.+|++|||+++...... ......+||+.|||||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 9999999954 4566777777776432100 0011246899999999
Q ss_pred ------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccC
Q 042735 568 ------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVS 641 (667)
Q Consensus 568 ------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~ 641 (667)
|+.++|||||||+||||++|..|+..... ...........+... ........++.+||+.+
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~L~~~ 252 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR------TMSSLRHRVLPPQIL-------LNWPKEASFCLWLLHPE 252 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH------HHHHHHHhhcChhhh-------hcCHHHHHHHHHhCCCC
Confidence 57899999999999999999888542110 000000111111110 11223456777899999
Q ss_pred CCCCCCHHHHHHHHHHhh
Q 042735 642 PESRPTMQTITQQLLFSL 659 (667)
Q Consensus 642 p~~RPt~~ev~~~l~~~~ 659 (667)
|.+||+|.||+++.|+..
T Consensus 253 P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 253 PSCRPSMSELLQSEFINE 270 (793)
T ss_pred hhhCcChHHHhhchhhhh
Confidence 999999999999988754
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.75 E-value=5.1e-19 Score=165.65 Aligned_cols=215 Identities=21% Similarity=0.305 Sum_probs=150.2
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
....|.+...|..|+|++..+. +++|++..... ..+..+.|..|.-.++-+.||||..++|.|..+....++..||+
T Consensus 194 l~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~--t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQGND-IVAKILNVREV--TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhccCCCcccccccccCcc-hhhhhhhhhhc--chhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 4456788899999999997766 44555543211 22334579999999999999999999999999999999999999
Q ss_pred CCChHHHhccccCC----------------------------cccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 505 RGSLATNLSNDAAA----------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 505 ~g~L~~~l~~~~~~----------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
.|+|+..|++.... ...-+.+..|++|++.++||+- |=+++.-+. ..
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism-ad~kfsfqe----~g 345 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQE----VG 345 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-ccceeeeec----cc
Confidence 99999999864311 0116788999999999999851 111110000 01
Q ss_pred ccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 557 LVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 557 ~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..-.|.||+||. .+++|+|||.|++||+.|++.||...+.+.- .-...-+.+.+.+|+....
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----gmkialeglrv~ippgis~----- 416 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----GMKIALEGLRVHIPPGISR----- 416 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----hhhhhhccccccCCCCccH-----
Confidence 123578999993 3478999999999999999999864332211 1111223344555544322
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
-+.+++.-|+..||.+||.+..|+--|+.
T Consensus 417 -hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 417 -HMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred -HHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 24456667999999999999988865543
No 422
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=8.1e-20 Score=190.05 Aligned_cols=275 Identities=23% Similarity=0.224 Sum_probs=157.0
Q ss_pred EEeccCCcCc-CCCCccccCCCCCCEEEccCccccc----cCCccccCCCCCCeeeccccccce------eCCCCCcc-c
Q 042735 7 ELHLRDNYLT-GLIPTETWNLKSLVKLGLGGNQFRG----SLPSSVGNLSSLRYLFLFENNLSG------SIPPSVGN-L 74 (667)
Q Consensus 7 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~-~ 74 (667)
.|+|+.+.++ ...+..+..+.+|++|++++|.++. .++..+...++|++|+++++.+.+ .++..+.. .
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 3445556677889999999998853 245566677889999998887652 11112222 2
Q ss_pred ccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCcccc----ccchhhhcC-CCCC
Q 042735 75 MLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRG----TISEAFGIY-LNLT 149 (667)
Q Consensus 75 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~----~~~~~~~~l-~~L~ 149 (667)
+|+.|+|++|.+.+..+..+..+.. . ++|+.|++++|++++ .+...+..+ ++|+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~ 140 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLR--------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALE 140 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhc--------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCce
Confidence 3555555555554333222222222 1 235555555555542 122233444 5566
Q ss_pred EEECcCCccCCc----cCccCCCCCCCCEEEccCCcCCCC----cCccccCCCCcCeeeccCCccccc----CCccccCC
Q 042735 150 FLDISDNNFFGE----IASNWGKCPKLSTLNVSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVGK----IPKEFGKL 217 (667)
Q Consensus 150 ~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l 217 (667)
.|++++|.+.+. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+. +...+..+
T Consensus 141 ~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred EEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 666666655421 223344555666666666666531 222334445667777776665432 22334556
Q ss_pred cccceeecccccccccCccccc-----CCCCCCeeeccCCcCCc----cchhhhhcccCCCeecCCCccCccc----cch
Q 042735 218 NSLTKLILRGNQLIGHLPSEIG-----SLTKLEFLNLSTNRFSS----LIPESLGNLLKLHYLDLSKYQFIQE----LPK 284 (667)
Q Consensus 218 ~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~n~~~~~----~p~ 284 (667)
++|+.|++++|.+.+.....+. ..+.|+.|++++|.++. .+...+..+++|+.+++++|.+... +..
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 6777777777776542222221 23678888888887762 1234455567788888888877644 444
Q ss_pred hhhcC-CCCCEEECcCCCC
Q 042735 285 ELGKL-VQLSELELSHNFL 302 (667)
Q Consensus 285 ~l~~l-~~L~~L~l~~n~l 302 (667)
.+... ..|++|++.+|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 301 SLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhhcCCchhhcccCCCCC
Confidence 44444 6788888887753
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=8e-18 Score=173.82 Aligned_cols=145 Identities=20% Similarity=0.201 Sum_probs=107.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC--CCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcCCCCeeE-EEEEEEeCCc
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP--SKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIRHRNIVK-FYGFCSHARH 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~--~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~-~~g~~~~~~~ 495 (667)
.++|+..+.||+|+||+||+|... ++..+|||+....... ......+.|.+|++++.+++|+|+|. ++++ +.
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~ 92 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GK 92 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CC
Confidence 467889999999999999999764 4667899986532110 11223456999999999999999995 5432 46
Q ss_pred eEEEEEecCCCChHHHhccc-----------------cCCccccc-ccCCeeecCCCceEEecccccccccCCCCC----
Q 042735 496 SILIYEYLKRGSLATNLSND-----------------AAAEELDI-SSKNVLLDLEHKAHVSDFGIAKFLKPDSSN---- 553 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~-----------------~~~~~~dl-k~~NiLld~~~~~kl~DFGla~~~~~~~~~---- 553 (667)
.|+||||+++++|....... ....|.|| ||+|||++.++.+||+|||+|+........
T Consensus 93 ~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~ 172 (365)
T PRK09188 93 DGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIA 172 (365)
T ss_pred cEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhh
Confidence 79999999999996321110 11234599 999999999999999999999976543211
Q ss_pred ----cccccccccccCCCC
Q 042735 554 ----WSALVGTYRYVAPDY 568 (667)
Q Consensus 554 ----~~~~~Gt~~y~aPE~ 568 (667)
.+...|++.|+|||+
T Consensus 173 ~~~d~~~~~~~~~~~~pe~ 191 (365)
T PRK09188 173 AYEDLRHLLKHKRTYAPDA 191 (365)
T ss_pred hhhhhhhhhccCccCCccc
Confidence 245678999999995
No 424
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1.4e-19 Score=188.19 Aligned_cols=257 Identities=23% Similarity=0.252 Sum_probs=182.2
Q ss_pred EEEccCcccc-ccCCccccCCCCCCeeecccccccee----CCCCCcc-cccCEEEcccccccccCCccccCCCCccEEE
Q 042735 31 KLGLGGNQFR-GSLPSSVGNLSSLRYLFLFENNLSGS----IPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVI 104 (667)
Q Consensus 31 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 104 (667)
.|+|.++.++ ...+..+..+++|+.|++++|.++.. ++..+.. ..++.|+++++.+.+. +
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~-~------------- 67 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRI-P------------- 67 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCc-c-------------
Confidence 5677777776 34445566777788888888877431 2222222 2355566555544310 0
Q ss_pred eeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCC---CCEEECcCCccCC----ccCccCCCC-CCCCEEE
Q 042735 105 VGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLN---LTFLDISDNNFFG----EIASNWGKC-PKLSTLN 176 (667)
Q Consensus 105 l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~---L~~L~L~~n~l~~----~~~~~~~~l-~~L~~L~ 176 (667)
.....++..+.++++|+.|++++|.+.+..+..+..+.+ |+.|++++|.+.+ .+...+..+ ++|+.|+
T Consensus 68 ----~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 68 ----RGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred ----hHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 000223456777899999999999998666666666665 9999999999863 233455667 8999999
Q ss_pred ccCCcCCCC----cCccccCCCCcCeeeccCCccccc----CCccccCCcccceeeccccccccc----CcccccCCCCC
Q 042735 177 VSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVGK----IPKEFGKLNSLTKLILRGNQLIGH----LPSEIGSLTKL 244 (667)
Q Consensus 177 L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L 244 (667)
+++|.+++. ++..+..+++|+.|++++|.+.+. ++..+..+++|+.|++++|.+.+. +...+..+++|
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L 223 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSL 223 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCC
Confidence 999999843 334567778999999999998742 233455667999999999988643 34456678999
Q ss_pred CeeeccCCcCCccchhhhhc-----ccCCCeecCCCccCc----cccchhhhcCCCCCEEECcCCCCCCc
Q 042735 245 EFLNLSTNRFSSLIPESLGN-----LLKLHYLDLSKYQFI----QELPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 245 ~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~ls~n~~~----~~~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
++|++++|.+++.....+.. ...|+.|++++|.+. ..+...+..+++|+++++++|.+...
T Consensus 224 ~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 224 EVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred CEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 99999999998643333332 379999999999875 23455667778999999999999754
No 425
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.72 E-value=2e-18 Score=172.21 Aligned_cols=232 Identities=19% Similarity=0.300 Sum_probs=160.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~ 495 (667)
..|.....||+|.|++||+|... ....||+|.+..... ......|++.|..+. |.||+++.+++..++.
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC------chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 45778889999999999999643 456799998865332 235789999999997 9999999999999999
Q ss_pred eEEEEEecCCCChHHHhccc---------------------cCCcccccccCCeeec-CCCceEEeccccccccc-----
Q 042735 496 SILIYEYLKRGSLATNLSND---------------------AAAEELDISSKNVLLD-LEHKAHVSDFGIAKFLK----- 548 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~---------------------~~~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~----- 548 (667)
..+|+||++.-+..+++..- ....|.||||+|+|.+ ..+.-.|.|||+|...+
T Consensus 110 v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred eEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence 99999999988776654331 1233569999999998 45678899999997211
Q ss_pred ------------C-CC--------------CC------------cccccccccccCCC-------CCCCchHHHHHHHHH
Q 042735 549 ------------P-DS--------------SN------------WSALVGTYRYVAPD-------YRKKCDVYSFRVLAL 582 (667)
Q Consensus 549 ------------~-~~--------------~~------------~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ 582 (667)
+ .. .. .....||+||-||| .+.++||||-|||++
T Consensus 190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 0 00 00 01246999999999 367899999999999
Q ss_pred HHHhCCCCCCCCccCCCCh-------------------------------hhhhhh-hccccC-CCCCC-CC-----Cch
Q 042735 583 EVIKGKHPRGFVSSILPSP-------------------------------SVINMR-LDEMLD-PRLPP-PS-----PDV 623 (667)
Q Consensus 583 ElltG~~p~~~~~~~~~~~-------------------------------~~~~~~-~~~~~~-~~~~~-~~-----~~~ 623 (667)
-+++++.||-....-.... ...... --+-++ ..+.. .. ...
T Consensus 270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~ 349 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG 349 (418)
T ss_pred hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence 9999999964110000000 000000 000000 00000 00 000
Q ss_pred H-HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 624 Q-GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 624 ~-~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. .....+.++..+|++.+|.+|-|+++.++|.+|.
T Consensus 350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~ 385 (418)
T KOG1167|consen 350 SDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD 385 (418)
T ss_pred cccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence 0 1122567888899999999999999999998875
No 426
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=9.5e-19 Score=153.13 Aligned_cols=166 Identities=31% Similarity=0.548 Sum_probs=119.5
Q ss_pred CCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcC
Q 042735 118 LRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLN 197 (667)
Q Consensus 118 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 197 (667)
+.++.+++.|.|+.|+++. .|..++.+.+|+.|++++|++ .++|.+++.+++|+.|+++.|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqi-e~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQI-EELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchh-hhcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 4566777788888888874 455677788888888888887 467777888888888888888775 5777788888888
Q ss_pred eeeccCCcccc-cCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCc
Q 042735 198 EFDLSLNHIVG-KIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKY 276 (667)
Q Consensus 198 ~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n 276 (667)
.|||++|.+.. .+|..|-.|+.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+-. +|..++.+..|+.|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~-lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLS-LPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhh-CcHHHHHHHHHHHHhcccc
Confidence 88888777653 35666777777777777777764 667777777777777777777654 4667777777777777777
Q ss_pred cCccccchhhhcC
Q 042735 277 QFIQELPKELGKL 289 (667)
Q Consensus 277 ~~~~~~p~~l~~l 289 (667)
++ ..+|.+++.+
T Consensus 184 rl-~vlppel~~l 195 (264)
T KOG0617|consen 184 RL-TVLPPELANL 195 (264)
T ss_pred ee-eecChhhhhh
Confidence 63 3455555543
No 427
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=8.5e-19 Score=153.42 Aligned_cols=163 Identities=29% Similarity=0.493 Sum_probs=136.5
Q ss_pred CCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEE
Q 042735 96 RNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTL 175 (667)
Q Consensus 96 ~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 175 (667)
.+.+.++|.++.|+++ .+|+.+..+.+|+.|++.+|++. .+|..++.+++|+.|++.-|++. .+|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3455666667777766 45666888888888888888886 57778888888888888888774 678889999999999
Q ss_pred EccCCcCCC-CcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcC
Q 042735 176 NVSMNNITR-SIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRF 254 (667)
Q Consensus 176 ~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 254 (667)
+|++|++.. .+|..|..|..|+.|+|++|.+. .+|+.++.+++|+.|.+..|.+. .+|.+++.+..|++|.+.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 999988865 68999999999999999999986 68889999999999999999987 6899999999999999999999
Q ss_pred Cccchhhhhc
Q 042735 255 SSLIPESLGN 264 (667)
Q Consensus 255 ~~~~p~~~~~ 264 (667)
+-. |..+++
T Consensus 186 ~vl-ppel~~ 194 (264)
T KOG0617|consen 186 TVL-PPELAN 194 (264)
T ss_pred eec-Chhhhh
Confidence 865 444544
No 428
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.67 E-value=5.3e-18 Score=177.68 Aligned_cols=213 Identities=25% Similarity=0.336 Sum_probs=152.3
Q ss_pred eecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEEec
Q 042735 429 IGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 429 lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
+|+|.||.|+.++. ..+..+|.|..++........ .....|..++...+ ||.+|++.-.+..+...+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~--~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDR--THTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccc--cccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 68999999998743 345668888776543322222 25667888899888 999999999999999999999999
Q ss_pred CCCChHHHhccccCC------------------------cccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 504 KRGSLATNLSNDAAA------------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 504 ~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
.+|++...+...... ...|+|++||++|.+|++|+.|||+++....... .||
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----~cg 155 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----ACG 155 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----ccc
Confidence 999998776543211 1229999999999999999999999997654332 299
Q ss_pred cccccCCC----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 560 TYRYVAPD----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 560 t~~y~aPE----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
|..||||| +...+|.|||||+++||+||-.||.. .+.. .+....++.+. ......-++..
T Consensus 156 t~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~--------~~~~----~Il~~~~~~p~----~l~~~a~~~~~ 219 (612)
T KOG0603|consen 156 TYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG--------DTMK----RILKAELEMPR----ELSAEARSLFR 219 (612)
T ss_pred chhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch--------HHHH----HHhhhccCCch----hhhHHHHHHHH
Confidence 99999999 46789999999999999999999763 1111 11111111111 11112223444
Q ss_pred hccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 636 SCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 636 ~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
.....+|..|-- ..|++++.++....|+
T Consensus 220 ~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 220 QLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred HHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 566777777754 4678888887776665
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.65 E-value=1.8e-16 Score=166.49 Aligned_cols=185 Identities=24% Similarity=0.403 Sum_probs=127.3
Q ss_pred HHhcCCCCeeEEEEEEEeCCceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCe
Q 042735 475 LTKIRHRNIVKFYGFCSHARHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNV 528 (667)
Q Consensus 475 l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~Ni 528 (667)
|+.+.|.|+.+++|.+.++...+.|.+||+.|+|.+.+..+.. ..|-.++++|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 3568899999999999999999999999999999988765321 11227999999
Q ss_pred eecCCCceEEecccccccccCC--CCCcccccccccccCCCC-------------CCCchHHHHHHHHHHHHhCCCCCCC
Q 042735 529 LLDLEHKAHVSDFGIAKFLKPD--SSNWSALVGTYRYVAPDY-------------RKKCDVYSFRVLALEVIKGKHPRGF 593 (667)
Q Consensus 529 Lld~~~~~kl~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~-------------~~~~DV~sfGvvl~ElltG~~p~~~ 593 (667)
++|..+.+|++|||+....... ........-..-|.|||. +.++||||||++++|+++.+.||+.
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 9999999999999999876431 111111223346899982 4569999999999999999999874
Q ss_pred CccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 594 VSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.........+. ..+...-.....+......+....+..++.+||..+|++||++++|-..+.....
T Consensus 161 ~~~~~~~~eii-~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 161 RNLVEDPDEII-LRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccCChHHHH-HHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 33222211111 1111101111111111111222257788889999999999999999887665543
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.63 E-value=2.5e-16 Score=151.14 Aligned_cols=166 Identities=13% Similarity=0.099 Sum_probs=118.8
Q ss_pred CcCHHHHHHH--HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHH------HHHHHHHHHhcCCC
Q 042735 410 KFDYVEIIRA--INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKE------FFAEIEALTKIRHR 481 (667)
Q Consensus 410 ~~~~~~~~~~--~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~------~~~E~~~l~~l~H~ 481 (667)
...+.++... -++|...+++|+|+||.||.+.. ++..+|+|.+.......+.. ... |.+|+..+.++.||
T Consensus 18 ~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~-~~~f~~g~~~e~Ea~~l~rL~~~ 95 (232)
T PRK10359 18 DNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERF-LKSFVKGDYYENLIVQTDRVRSE 95 (232)
T ss_pred cccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHH-HHhhhhhHHHHHHHHHHHHHHHC
Confidence 3345555443 36788999999999999999866 46679999987654433222 222 67999999999999
Q ss_pred CeeEEEEEEEeC--------CceEEEEEecCCCChHHHhccc----------------cCCcccccccCCeeecCCCceE
Q 042735 482 NIVKFYGFCSHA--------RHSILIYEYLKRGSLATNLSND----------------AAAEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 482 niv~~~g~~~~~--------~~~~lv~ey~~~g~L~~~l~~~----------------~~~~~~dlk~~NiLld~~~~~k 537 (667)
+|.....++... ...++||||++|.+|.+..... ....|.|+||+||+++.++ ++
T Consensus 96 GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 96 GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 999999986643 3578999999999997753211 1122449999999999988 99
Q ss_pred EecccccccccCCCCCcccccccccccC-CCCCCCchHHHHHHHHHHHH
Q 042735 538 VSDFGIAKFLKPDSSNWSALVGTYRYVA-PDYRKKCDVYSFRVLALEVI 585 (667)
Q Consensus 538 l~DFGla~~~~~~~~~~~~~~Gt~~y~a-PE~~~~~DV~sfGvvl~Ell 585 (667)
++|||..+........ .. |+- =+|..++|+|||||++.-..
T Consensus 175 liDfg~~~~~~e~~a~-d~------~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK-DR------IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH-HH------HHHHhHhcccccccceeEeehHHH
Confidence 9999998765432211 10 110 01567899999999887653
No 431
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.63 E-value=1e-14 Score=151.76 Aligned_cols=228 Identities=26% Similarity=0.375 Sum_probs=160.1
Q ss_pred CcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCC-CeeEEEEEEEeCCceEEEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHR-NIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~~~g~~~~~~~~~lv~e 501 (667)
|.....+|.|+||.||++... ..+++|.+........ .....|.+|+.+++.+.|+ +++++++++......++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS-KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch-hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 456678999999999999877 6788898876443221 2356799999999999988 79999999977777899999
Q ss_pred ecCCCChHHHhcccc----C-----------------------CcccccccCCeeecCCC-ceEEecccccccccCCCC-
Q 042735 502 YLKRGSLATNLSNDA----A-----------------------AEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 502 y~~~g~L~~~l~~~~----~-----------------------~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~- 552 (667)
|+.++++.+.+.... . ..|.|+||+||+++..+ .+|++|||.++.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999986554321 0 12349999999999888 799999999986554332
Q ss_pred -----CcccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 553 -----NWSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 553 -----~~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
......||..|+|||. ....|+||+|++++++++|..|+............. ........+....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL-KIILELPTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH-HHHHhcCCccccc
Confidence 2356789999999992 235799999999999999999965332110001111 1111111110111
Q ss_pred CCCch--HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 619 PSPDV--QGKLISIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 619 ~~~~~--~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
..... ......+.+++..|+..+|..|.++.+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11110 0112345677889999999999999887766
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=1.9e-16 Score=174.64 Aligned_cols=232 Identities=19% Similarity=0.235 Sum_probs=153.8
Q ss_pred CcceeecccCeEEEEEEe-CCCceEEEEecCCC--CCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 425 AKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSP--LPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~--~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
....+|.|++|.|+.+.. ......+.|.+... ...........+..|.-+-+.++|||++.....+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456899999998887753 34444555544311 111111122236678888889999999888887777766666699
Q ss_pred ecCCCChHHHhccc-c-----------------------CCcccccccCCeeecCCCceEEecccccccccCCC----CC
Q 042735 502 YLKRGSLATNLSND-A-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS----SN 553 (667)
Q Consensus 502 y~~~g~L~~~l~~~-~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~----~~ 553 (667)
||++ +|+..+... . ...++|+|++|++++.+|.+||+|||.+....-.. ..
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~ 480 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE 480 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh
Confidence 9999 998877653 1 11245999999999999999999999997654222 22
Q ss_pred cccccccccccCCC------CC-CCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YR-KKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~-~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
...++|+-.|+||| |+ ...||||.|||+..|++|+.||.......... .......... ...++..-....
T Consensus 481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~l 557 (601)
T KOG0590|consen 481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KTNNYSDQRN-IFEGPNRLLSLL 557 (601)
T ss_pred hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hhhccccccc-cccChHHHHHhc
Confidence 45678999999999 33 35899999999999999999986432211110 0000000000 001111111112
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......++.+.++.+|.+|-|+++|++.-|+..+
T Consensus 558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 558 PRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 2234567778999999999999999999888643
No 433
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.59 E-value=8.6e-15 Score=148.27 Aligned_cols=79 Identities=22% Similarity=0.394 Sum_probs=62.9
Q ss_pred cCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-C-------CCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-H-------RNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-------~niv~~~g~~~ 491 (667)
.+|.+.+.||.|.|++||+|- ....+.||+|+.+.. ....+..+.||++|++++ + .+||+|++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 467788999999999999995 466788999997652 123456788999999885 2 37999999996
Q ss_pred e----CCceEEEEEecC
Q 042735 492 H----ARHSILIYEYLK 504 (667)
Q Consensus 492 ~----~~~~~lv~ey~~ 504 (667)
. +.+.++|+||+-
T Consensus 153 hsGpNG~HVCMVfEvLG 169 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVLG 169 (590)
T ss_pred ecCCCCcEEEEEehhhh
Confidence 5 568899999874
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.56 E-value=3.4e-14 Score=133.37 Aligned_cols=163 Identities=10% Similarity=0.021 Sum_probs=114.9
Q ss_pred cCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEEe
Q 042735 424 DAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ey 502 (667)
.....+++|+||+||.+.- .+..++.+.+.....-........|.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4557899999999998766 455566565543211101111235889999999996 5889999886 346899999
Q ss_pred cCCCChHHHhcccc-----------------CCccccc-ccCCeeecCCCceEEecccccccccCCCCC----c------
Q 042735 503 LKRGSLATNLSNDA-----------------AAEELDI-SSKNVLLDLEHKAHVSDFGIAKFLKPDSSN----W------ 554 (667)
Q Consensus 503 ~~~g~L~~~l~~~~-----------------~~~~~dl-k~~NiLld~~~~~kl~DFGla~~~~~~~~~----~------ 554 (667)
+.|.+|.+...... ...|.|| ||+|||++.++.++|+|||+|......... .
T Consensus 80 I~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~ 159 (218)
T PRK12274 80 LAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRH 159 (218)
T ss_pred ecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHH
Confidence 99999976542211 1234599 799999999999999999999865433210 0
Q ss_pred ---ccccccccccCCC----CCC----CchHHHHHHHHHHHHhCCCCC
Q 042735 555 ---SALVGTYRYVAPD----YRK----KCDVYSFRVLALEVIKGKHPR 591 (667)
Q Consensus 555 ---~~~~Gt~~y~aPE----~~~----~~DV~sfGvvl~ElltG~~p~ 591 (667)
.-...++.|++|+ ... ..+.++-|.-+|.++||+.+.
T Consensus 160 llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 160 LLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 0113577888886 122 357889999999999999874
No 435
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.45 E-value=2.5e-13 Score=129.06 Aligned_cols=119 Identities=19% Similarity=0.227 Sum_probs=82.2
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHH----------------------hHHHHHHHHHHHHhcCCCCe
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIA----------------------DQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~ni 483 (667)
..+||+|+||.||+|...+|+.||||+++......... ......+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999998889999999986542211100 01123459999999988776
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHH-hcc------------------------ccCCcccccccCCeeecCCCceEE
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATN-LSN------------------------DAAAEELDISSKNVLLDLEHKAHV 538 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~-l~~------------------------~~~~~~~dlk~~NiLld~~~~~kl 538 (667)
.....+.. ...++||||++++++... +.. .....|.|+||+|||++ ++.++|
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~L 158 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYI 158 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEE
Confidence 44333322 234899999998876432 111 11123459999999998 578999
Q ss_pred ecccccccc
Q 042735 539 SDFGIAKFL 547 (667)
Q Consensus 539 ~DFGla~~~ 547 (667)
+|||+|...
T Consensus 159 iDFG~a~~~ 167 (190)
T cd05147 159 IDVSQSVEH 167 (190)
T ss_pred EEccccccC
Confidence 999999754
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.43 E-value=7.5e-13 Score=126.24 Aligned_cols=120 Identities=22% Similarity=0.222 Sum_probs=85.8
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCch----------------------HHhHHHHHHHHHHHHhcCCCCe
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ----------------------IADQKEFFAEIEALTKIRHRNI 483 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H~ni 483 (667)
...||+|+||+||+|...+|+.||||.+........ ......+.+|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 357999999999999877899999999875422100 0001234689999999999988
Q ss_pred eEEEEEEEeCCceEEEEEecCCCChHHH-hccc------------------------cCCcccccccCCeeecCCCceEE
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSLATN-LSND------------------------AAAEELDISSKNVLLDLEHKAHV 538 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L~~~-l~~~------------------------~~~~~~dlk~~NiLld~~~~~kl 538 (667)
.....+... ..++||||++++++... +... ....|.|+||+||+++ ++.++|
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~l 158 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYI 158 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEE
Confidence 554444333 24899999998854322 2111 1223459999999999 899999
Q ss_pred eccccccccc
Q 042735 539 SDFGIAKFLK 548 (667)
Q Consensus 539 ~DFGla~~~~ 548 (667)
+|||+++...
T Consensus 159 iDFG~a~~~~ 168 (190)
T cd05145 159 IDVSQAVELD 168 (190)
T ss_pred EEcccceecC
Confidence 9999998754
No 437
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.42 E-value=3.3e-14 Score=156.77 Aligned_cols=215 Identities=21% Similarity=0.261 Sum_probs=144.9
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~e 501 (667)
++...+.+|+++|=+|.+|+.+.|. |+||++.+....-..+.-++-.+|++ ...++|||.+.+.-+-...+..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4566778999999999999998887 88998866543222222233344555 667789999999888777788888888
Q ss_pred ecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEeccccccc--ccCCCC-Cc
Q 042735 502 YLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKF--LKPDSS-NW 554 (667)
Q Consensus 502 y~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~--~~~~~~-~~ 554 (667)
|..+ +|++.+..... .-|-|||.+|||++.-.=+.|+||.--|. ++.++. ..
T Consensus 102 yvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf 180 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF 180 (1431)
T ss_pred HHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence 8875 78777654321 11239999999999777789999976553 222221 11
Q ss_pred c----cccccccccCCCC-----------------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCC----hhhhhhhh
Q 042735 555 S----ALVGTYRYVAPDY-----------------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPS----PSVINMRL 608 (667)
Q Consensus 555 ~----~~~Gt~~y~aPE~-----------------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~----~~~~~~~~ 608 (667)
+ +..-...|+|||- +++.||||.|||+.|+++ |++||... ....+ .......+
T Consensus 181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-QL~aYr~~~~~~~e~~L 259 (1431)
T KOG1240|consen 181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-QLLAYRSGNADDPEQLL 259 (1431)
T ss_pred eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-HHHhHhccCccCHHHHH
Confidence 1 2223357999991 246799999999999988 67777521 11111 01111222
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
+++-|. .+..++..+++.||++|-++++.++.
T Consensus 260 e~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 260 EKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 222221 24456778899999999999999987
No 438
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.40 E-value=5.6e-12 Score=130.79 Aligned_cols=224 Identities=20% Similarity=0.204 Sum_probs=145.2
Q ss_pred CCcCcceeecccCeEEEEEEeCCC--ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC----CCeeEEEEEE-EeCC
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSK--EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH----RNIVKFYGFC-SHAR 494 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~--~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~~~g~~-~~~~ 494 (667)
.|...+.||+|+||.||.|..... ..+|+|......... . ..+..|+.++..+.+ +++..+++.. ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---P-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---C-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 688899999999999999986553 467887654322111 1 146778888888873 6899999988 4778
Q ss_pred ceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCC-----CceEEecccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLE-----HKAHVSDFGI 543 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~-----~~~kl~DFGl 543 (667)
..|+||+.+ |.+|.+...... ...|.||||+|+++... ..+.+.|||+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 899999965 457766542111 12245999999999855 4689999999
Q ss_pred cc--cccCCCC-------C-cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh
Q 042735 544 AK--FLKPDSS-------N-WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR 607 (667)
Q Consensus 544 a~--~~~~~~~-------~-~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 607 (667)
|+ ....... . ...+.||..|+++. ..++-|+||++-++.|+..|..||................
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 98 3221111 1 22456999999985 5778999999999999999999985433211111111111
Q ss_pred hccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 608 LDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
....... ... .... .+.++...+-..+...+|--..+...+..
T Consensus 254 ~~~~~~~-~~~---~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 254 RKLLTDR-FGD---LKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred hhhcccc-ccC---CChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 1111111 111 1112 23334444455788899998888766543
No 439
>PRK10345 hypothetical protein; Provisional
Probab=99.40 E-value=1.3e-12 Score=125.16 Aligned_cols=117 Identities=17% Similarity=0.210 Sum_probs=85.3
Q ss_pred CcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-----CCCCeeEEEEEEEeCC---
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-----RHRNIVKFYGFCSHAR--- 494 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~~~g~~~~~~--- 494 (667)
.+....||+|+||.||. .+.....+||++..... ...+.+.+|+++++++ +||||++++|++.+..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 34567899999999996 44434457888754211 2345689999999999 6799999999998863
Q ss_pred ceE-EEEEe--cCCCChHHHhccccCC----------------------cccccccCCeeecC----CCceEEecccccc
Q 042735 495 HSI-LIYEY--LKRGSLATNLSNDAAA----------------------EELDISSKNVLLDL----EHKAHVSDFGIAK 545 (667)
Q Consensus 495 ~~~-lv~ey--~~~g~L~~~l~~~~~~----------------------~~~dlk~~NiLld~----~~~~kl~DFGla~ 545 (667)
..+ +|+|| +++|+|.+.+...... .+.||||+|||++. ++.++|+||+-++
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 333 78999 6689998888543211 12399999999974 3479999954443
No 440
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.31 E-value=6.9e-13 Score=137.00 Aligned_cols=147 Identities=20% Similarity=0.320 Sum_probs=101.3
Q ss_pred CceEEEEEecCCCChHHHhccccC----------------C--------cccccccCCeeecCCCceEEecccccccccC
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA----------------A--------EELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~----------------~--------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
...|+.|++|..++|.+|+..... + .+.|+||.||....+..+||.|||+......
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~ 408 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDK 408 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeeccc
Confidence 357899999999999999963211 1 1449999999999999999999999987654
Q ss_pred CC------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 550 DS------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 550 ~~------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
.. ...+...||..||+|| |..|+|+||+|++|+|+++ =..++. ......++-|..+
T Consensus 409 ~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d~r~g~i 477 (516)
T KOG1033|consen 409 DETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTDIRDGII 477 (516)
T ss_pred CCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhhhhcCCC
Confidence 43 1245678999999999 7899999999999999997 222221 0111122233333
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
|+... ..-..-..+.+..+...|.+||++.++..+
T Consensus 478 p~~~~---~d~p~e~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 478 PPEFL---QDYPEEYTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred ChHHh---hcCcHHHHHHHHhcCCCcccCchHHHHhhh
Confidence 32110 001112356667899999999966655543
No 441
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.29 E-value=1.4e-11 Score=136.73 Aligned_cols=126 Identities=15% Similarity=0.231 Sum_probs=93.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCc---hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSD---QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..|...+.||+|+||.||+|.+.....++.++..+..... .....+.+.+|++++.+++|++++..+.++......+
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 3445678899999999999987655433322222211111 1122356889999999999999999888888878889
Q ss_pred EEEEecCCCChHHHhcc----------------ccCCcccccccCCeeecCCCceEEecccccccc
Q 042735 498 LIYEYLKRGSLATNLSN----------------DAAAEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~----------------~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
+||||+++++|.+.+.. .....|.|+||+|||+ .++.++|+|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99999999999887631 1123356999999999 5789999999999864
No 442
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.29 E-value=1.6e-11 Score=119.49 Aligned_cols=118 Identities=16% Similarity=0.224 Sum_probs=92.0
Q ss_pred ceeecccCeEEEEEEeCCCceEEEEecCCCCCCch----HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ----IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
+.||+|++|.||+|.. .+..++||+......... ......+.+|++++..++|+++.....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 556688887654322111 11234688999999999999998888887778889999999
Q ss_pred cCCCChHHHhcccc--------------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 503 LKRGSLATNLSNDA--------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 503 ~~~g~L~~~l~~~~--------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
++|++|.+.+.... ...|.|++|+||+++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999987764321 122449999999999 88999999999875
No 443
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.28 E-value=1.5e-11 Score=118.26 Aligned_cols=122 Identities=20% Similarity=0.165 Sum_probs=88.7
Q ss_pred CcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCch------------------HHhHHHHHHHHHHHHhcCCC--C
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ------------------IADQKEFFAEIEALTKIRHR--N 482 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~H~--n 482 (667)
|...+.||+|+||.||+|..++++.+|||++........ ......+.+|..++.++.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 556688999999999999988899999998654221000 00112467899999999887 4
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCChHHHhc-cc-----------------cCCcccccccCCeeecCCCceEEeccccc
Q 042735 483 IVKFYGFCSHARHSILIYEYLKRGSLATNLS-ND-----------------AAAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 483 iv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~-~~-----------------~~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
+.+.++. ...++||||+++++|..... .. ....|.|+||+||++++++.++|+|||.+
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~ 172 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQM 172 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCcc
Confidence 4555442 45689999999999866543 11 11224499999999999999999999999
Q ss_pred cccc
Q 042735 545 KFLK 548 (667)
Q Consensus 545 ~~~~ 548 (667)
....
T Consensus 173 ~~~~ 176 (198)
T cd05144 173 VSTD 176 (198)
T ss_pred ccCC
Confidence 6543
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.28 E-value=2.4e-12 Score=142.18 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=125.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+.++.|..|+||.||.++++. .+++|. ++++.. -+.|- ++.....|.+| |=|... +=.
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~---------lilRn--ilt~a~npfvv---gDc~tl---lk~ 144 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN---------LILRN--ILTFAGNPFVV---GDCATL---LKN 144 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccc---------hhhhc--cccccCCccee---chhhhh---ccc
Confidence 588999999999999999998765 456777 443311 01111 44555566666 222110 000
Q ss_pred EEecCCCC-hH-HHhccccCCcccccccCCeeecCCCceEEecccccccccCCC---------------CCccccccccc
Q 042735 500 YEYLKRGS-LA-TNLSNDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS---------------SNWSALVGTYR 562 (667)
Q Consensus 500 ~ey~~~g~-L~-~~l~~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~---------------~~~~~~~Gt~~ 562 (667)
+--.+.+- |+ ++++ .....+.|+||+|.+|..=|++|++|||+++..--.. -....++|||.
T Consensus 145 ~g~lPvdmvla~Eylh-~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPe 223 (1205)
T KOG0606|consen 145 IGPLPVDMVLAVEYLH-SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPE 223 (1205)
T ss_pred CCCCcchhhHHhHhhc-cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcc
Confidence 00000000 11 1122 2345567999999999999999999999998531100 01134699999
Q ss_pred ccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHh
Q 042735 563 YVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFS 636 (667)
Q Consensus 563 y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (667)
|.||| |...+|+|++|+|+||.+.|+.||........ ....+.+. ..++...+.. ..+..+++.+
T Consensus 224 yiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel----fg~visd~--i~wpE~dea~---p~Ea~dli~~ 294 (1205)
T KOG0606|consen 224 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL----FGQVISDD--IEWPEEDEAL---PPEAQDLIEQ 294 (1205)
T ss_pred ccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH----Hhhhhhhh--ccccccCcCC---CHHHHHHHHH
Confidence 99999 67789999999999999999999764311000 00000000 0111111111 1123345556
Q ss_pred ccccCCCCC---CCHHHHHHHHHHhhhhh
Q 042735 637 CLDVSPESR---PTMQTITQQLLFSLVYF 662 (667)
Q Consensus 637 Cl~~~p~~R---Pt~~ev~~~l~~~~~~~ 662 (667)
-++.+|..| +.+-+|.++-+|..-.|
T Consensus 295 LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 295 LLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred HHHhChHhhcccchhhhhhhccceeeccc
Confidence 788899888 45566666666654433
No 445
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.27 E-value=1.3e-13 Score=142.34 Aligned_cols=171 Identities=26% Similarity=0.393 Sum_probs=96.2
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccc
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENN 84 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n 84 (667)
-...||+.|++. ++|..++.+..|+.|.|.+|.|. .+|..+++|..|.+|||+.|+++ .+|..+..+-|++|-+++|
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNN 153 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNN 153 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecC
Confidence 344566666665 35666666666777777777665 56666777777777777777665 5566666666666666666
Q ss_pred cccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCc
Q 042735 85 HFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIAS 164 (667)
Q Consensus 85 ~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 164 (667)
+++ .+| ..++.++.|..|+.+.|++. .+|..++.+.+|+.|.+..|++. .+|.
T Consensus 154 kl~-~lp------------------------~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 154 KLT-SLP------------------------EEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred ccc-cCC------------------------cccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 664 334 44444445555555555543 34444555555555555555543 2333
Q ss_pred cCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCccc
Q 042735 165 NWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIV 207 (667)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 207 (667)
.+. .-.|..||++.|++. .+|..|.+|+.|++|-|.+|-+.
T Consensus 207 El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 207 ELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 333 223555555555554 35555555555555555555543
No 446
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.26 E-value=2.1e-11 Score=117.39 Aligned_cols=117 Identities=15% Similarity=0.248 Sum_probs=88.6
Q ss_pred eeecccCeEEEEEEeCCCceEEEEecCCCCCCc----hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 428 CIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSD----QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.||+|+||.||+|.+ ++..+++|+........ .....+++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999986 45678888754322111 1122356889999999999987666666666777789999999
Q ss_pred CCCChHHHhcccc-----------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 504 KRGSLATNLSNDA-----------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 504 ~~g~L~~~l~~~~-----------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+|++|.+.+.... ...|.|++|.||+++ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999987764421 112449999999999 89999999999875
No 447
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.24 E-value=2.2e-11 Score=120.76 Aligned_cols=200 Identities=20% Similarity=0.223 Sum_probs=111.9
Q ss_pred cCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-----------CCeeEEEEEEE
Q 042735 424 DAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-----------RNIVKFYGFCS 491 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-----------~niv~~~g~~~ 491 (667)
.....||.|+++.||.+... +++.+|||++..... ......+++.+|.-....+.+ .-++.+ +...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~-~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d~~~ 92 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD-ASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-DLLR 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST-THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-EEEE
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccc-cchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-EEEE
Confidence 45678999999999999874 588999998754432 233345677777755544333 222222 2111
Q ss_pred ---------eCC--------ceEEEEEecCCCChHHHhcc---cc----------------------------CCccccc
Q 042735 492 ---------HAR--------HSILIYEYLKRGSLATNLSN---DA----------------------------AAEELDI 523 (667)
Q Consensus 492 ---------~~~--------~~~lv~ey~~~g~L~~~l~~---~~----------------------------~~~~~dl 523 (667)
... ..+++|.-+ .++|.+.+.. .. ..-|-||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 111 224566655 4577654321 10 0112399
Q ss_pred ccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCC--------------CCCCchHHHHHHHHHHHHhCCC
Q 042735 524 SSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD--------------YRKKCDVYSFRVLALEVIKGKH 589 (667)
Q Consensus 524 k~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE--------------~~~~~DV~sfGvvl~ElltG~~ 589 (667)
||+|++++.+|.++|+||+........ ......+.+|.+|| |+.+.|.|++|+++|.|+.|+.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999999999999999877643221 11123456788887 3557799999999999999999
Q ss_pred CCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCC
Q 042735 590 PRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESR 645 (667)
Q Consensus 590 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~R 645 (667)
|++.......... ..-+ +.. -...+..++...++.+|++|
T Consensus 249 Pf~~~~~~~~~~~-------~f~~------C~~---~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADPEW-------DFSR------CRD---MPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTSGG-------GGTT------SS------HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccccc-------cchh------cCC---cCHHHHHHHHHHccCCcccC
Confidence 9875432211110 0000 111 11234556668899999887
No 448
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.22 E-value=4e-11 Score=116.50 Aligned_cols=166 Identities=21% Similarity=0.296 Sum_probs=123.3
Q ss_pred CCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv 499 (667)
.|.+.+.||+|+||..+.|. +-.++.||||--...... -+...|.+.-+.|. .+.|-..|-|..++.+-.||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A------PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA------PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCc------chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 67888999999999999996 678899999965432211 12445555555554 68999999888889889999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCC-----CceEEecccccccccC
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLE-----HKAHVSDFGIAKFLKP 549 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~-----~~~kl~DFGla~~~~~ 549 (667)
+|.+ |-||.+.+.-.. .....||||+|.||... ..+.+.|||+|+...+
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 9976 567766543110 01123999999999754 3588999999997654
Q ss_pred CCC-------CcccccccccccCC------CCCCCchHHHHHHHHHHHHhCCCCCCCC
Q 042735 550 DSS-------NWSALVGTYRYVAP------DYRKKCDVYSFRVLALEVIKGKHPRGFV 594 (667)
Q Consensus 550 ~~~-------~~~~~~Gt~~y~aP------E~~~~~DV~sfGvvl~ElltG~~p~~~~ 594 (667)
... ......||.+||+= |...+-|.=|+|=++.-.+.|..||...
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 321 12456899999986 4667889999999999999999998743
No 449
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=4.6e-11 Score=118.63 Aligned_cols=164 Identities=23% Similarity=0.300 Sum_probs=99.9
Q ss_pred cCCCCeeEEEEEEEe---------------------------CCceEEEEEecCCCChHHHhcccc--------------
Q 042735 478 IRHRNIVKFYGFCSH---------------------------ARHSILIYEYLKRGSLATNLSNDA-------------- 516 (667)
Q Consensus 478 l~H~niv~~~g~~~~---------------------------~~~~~lv~ey~~~g~L~~~l~~~~-------------- 516 (667)
-+|||||++.++|.+ +...|+||.-.+. +|++++....
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHH
Confidence 369999999998753 3456777754332 5555543221
Q ss_pred ---------CCcccccccCCeee--cCCCc--eEEecccccccccCC------CCCcccccccccccCCCC---------
Q 042735 517 ---------AAEELDISSKNVLL--DLEHK--AHVSDFGIAKFLKPD------SSNWSALVGTYRYVAPDY--------- 568 (667)
Q Consensus 517 ---------~~~~~dlk~~NiLl--d~~~~--~kl~DFGla~~~~~~------~~~~~~~~Gt~~y~aPE~--------- 568 (667)
...|.|+|++|||+ |+|+. ..|+|||.+-.-+.. .+..-...|.-.-||||.
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 12345999999999 44444 578999987432211 111112346678899993
Q ss_pred ---CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCC
Q 042735 569 ---RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESR 645 (667)
Q Consensus 569 ---~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~R 645 (667)
-.|+|.|+.|-+.||+++...||-....+.... . ..++--=|.++...+. .+.+++..-++.||.+|
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~--r--~Yqe~qLPalp~~vpp------~~rqlV~~lL~r~pskR 501 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT--R--TYQESQLPALPSRVPP------VARQLVFDLLKRDPSKR 501 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchheech--h--hhhhhhCCCCcccCCh------HHHHHHHHHhcCCcccc
Confidence 258999999999999999999975311111100 0 0111111333333333 23355667799999999
Q ss_pred CCHHHHH
Q 042735 646 PTMQTIT 652 (667)
Q Consensus 646 Pt~~ev~ 652 (667)
|+..-..
T Consensus 502 vsp~iAA 508 (598)
T KOG4158|consen 502 VSPNIAA 508 (598)
T ss_pred CCccHHH
Confidence 9965443
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.21 E-value=5.2e-13 Score=137.90 Aligned_cols=179 Identities=35% Similarity=0.460 Sum_probs=107.9
Q ss_pred CCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEc
Q 042735 98 GALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNV 177 (667)
Q Consensus 98 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 177 (667)
.--...+++.|++. .+|..+..+-.|+.|.|..|.+. .+|..++++..|++|||+.|++. .+|..++.|+ |+.|.+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33444566666665 45666666666666666666665 55666666666777777766664 4455555544 666666
Q ss_pred cCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCcc
Q 042735 178 SMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 178 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
++|+++ .+|..++.+.+|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|.|+++.
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~- 225 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISY- 225 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceee-
Confidence 666665 45566666666666666666654 34555666666666666666654 455555533 45666666666653
Q ss_pred chhhhhcccCCCeecCCCccCccccchhh
Q 042735 258 IPESLGNLLKLHYLDLSKYQFIQELPKEL 286 (667)
Q Consensus 258 ~p~~~~~l~~L~~L~ls~n~~~~~~p~~l 286 (667)
+|-.|.+|..|++|-|.+|.+ +.-|..+
T Consensus 226 iPv~fr~m~~Lq~l~LenNPL-qSPPAqI 253 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPL-QSPPAQI 253 (722)
T ss_pred cchhhhhhhhheeeeeccCCC-CCChHHH
Confidence 466666666666666655553 3444443
No 451
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.18 E-value=3.4e-11 Score=111.90 Aligned_cols=175 Identities=22% Similarity=0.268 Sum_probs=127.4
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEE-eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-CCeeEEEEEE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAE-LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-RNIVKFYGFC 490 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~g~~ 490 (667)
.++++.+ ..|...+.||+|+||.+|.|. ..+|+.||+|.-..... .-+...|.++-+.++| ..|..++-|.
T Consensus 8 ~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------hpqL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 8 LEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------HPQLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred hhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC------CcchhHHHHHHHHhccCCCCchhhhhc
Confidence 3444433 578889999999999999996 57899999997544321 1246678888888875 5566666777
Q ss_pred EeCCceEEEEEecCCCChHHHhccc-------------------------cCCcccccccCCeeecC---CCceEEeccc
Q 042735 491 SHARHSILIYEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDL---EHKAHVSDFG 542 (667)
Q Consensus 491 ~~~~~~~lv~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~---~~~~kl~DFG 542 (667)
.+...-.+|||.. |.+|.+.+.-. ....|.||||+|.|..- ...+.++|||
T Consensus 81 ~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 81 TEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred cccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 7888889999976 56776654210 11234599999999963 3467899999
Q ss_pred ccccccCCCCC-------cccccccccccCC------CCCCCchHHHHHHHHHHHHhCCCCCCCCc
Q 042735 543 IAKFLKPDSSN-------WSALVGTYRYVAP------DYRKKCDVYSFRVLALEVIKGKHPRGFVS 595 (667)
Q Consensus 543 la~~~~~~~~~-------~~~~~Gt~~y~aP------E~~~~~DV~sfGvvl~ElltG~~p~~~~~ 595 (667)
+|+...+.... -+...||..|.+- |...+-|+=|.|-+|.-.-.|..||....
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 99976543211 2346799999764 45677899999999999999999987544
No 452
>smart00090 RIO RIO-like kinase.
Probab=99.17 E-value=9.5e-11 Score=115.29 Aligned_cols=121 Identities=20% Similarity=0.203 Sum_probs=85.6
Q ss_pred CcCcceeecccCeEEEEEE--eCCCceEEEEecCCCCCCch------------------H--HhHHHHHHHHHHHHhcCC
Q 042735 423 FDAKYCIGSGRHGSVYRAE--LPSKEFLAVKKFNSPLPSDQ------------------I--ADQKEFFAEIEALTKIRH 480 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~--~~~~~~~avk~~~~~~~~~~------------------~--~~~~~~~~E~~~l~~l~H 480 (667)
|+..+.||+|+||.||+|. ..+|..||||.+........ . .....+.+|++.+.++.|
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5567889999999999998 56889999998864321100 0 012346789999999986
Q ss_pred C--CeeEEEEEEEeCCceEEEEEecCCCChHHHhcc------------------------ccC-CcccccccCCeeecCC
Q 042735 481 R--NIVKFYGFCSHARHSILIYEYLKRGSLATNLSN------------------------DAA-AEELDISSKNVLLDLE 533 (667)
Q Consensus 481 ~--niv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~------------------------~~~-~~~~dlk~~NiLld~~ 533 (667)
. .+.+++++ ...++||||++++++...... ... ..|.|+||+||+++ +
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~ 184 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D 184 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C
Confidence 3 34444443 235899999999887543211 011 34559999999999 8
Q ss_pred CceEEeccccccccc
Q 042735 534 HKAHVSDFGIAKFLK 548 (667)
Q Consensus 534 ~~~kl~DFGla~~~~ 548 (667)
+.++|+|||.++...
T Consensus 185 ~~i~LiDFg~a~~~~ 199 (237)
T smart00090 185 GKVVIIDVSQSVELD 199 (237)
T ss_pred CCEEEEEChhhhccC
Confidence 899999999987543
No 453
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.16 E-value=4.9e-11 Score=127.81 Aligned_cols=200 Identities=32% Similarity=0.453 Sum_probs=137.1
Q ss_pred EEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCC-CCcEEEccCCccccccchhhhcCCCCCEEECcCC
Q 042735 78 VLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCP-NLVRISLEGNNMRGTISEAFGIYLNLTFLDISDN 156 (667)
Q Consensus 78 ~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~-~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n 156 (667)
.+++..|.+.... ..+.....++.|++..|.+.. +|.....+. +|+.|++++|.+. .++..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4566666653222 223334567777777777764 344455553 7888888888876 34456777888888888888
Q ss_pred ccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcc
Q 042735 157 NFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS 236 (667)
Q Consensus 157 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 236 (667)
++. .+|...+.++.|+.|++++|++. .+|..+..+..|++|++++|... ..+..+..+.++..|.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 775 44544446778888888888886 45555555666888888888432 34556777888888888888765 3466
Q ss_pred cccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhh
Q 042735 237 EIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKEL 286 (667)
Q Consensus 237 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l 286 (667)
.++.+++|+.|++++|.++...+ ++.+.+|+.|++++|.+....|...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 77788888888888888876533 7778888888888888776666543
No 454
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.16 E-value=5.2e-11 Score=127.60 Aligned_cols=200 Identities=38% Similarity=0.543 Sum_probs=158.2
Q ss_pred EEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCC-CCCEEECcCCccCCccCccCCCCCCCCEEEccCC
Q 042735 102 RVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYL-NLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMN 180 (667)
Q Consensus 102 ~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 180 (667)
.+.+..|.+.... ..+..++.++.|++.+|.++. ++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5677777764332 335566889999999999984 555566664 9999999999985 55567889999999999999
Q ss_pred cCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchh
Q 042735 181 NITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPE 260 (667)
Q Consensus 181 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 260 (667)
++.. +|...+.++.|+.|++++|++. .+|.....+..|+.|.+++|.+. ..+..+..+.++..|.+.+|++... +.
T Consensus 174 ~l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~ 249 (394)
T COG4886 174 DLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PE 249 (394)
T ss_pred hhhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cc
Confidence 9984 5555558889999999999987 45665566677999999999643 4667788899999999999998753 77
Q ss_pred hhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccc
Q 042735 261 SLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQI 310 (667)
Q Consensus 261 ~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~ 310 (667)
.++.++.|+.|++++|++.. ++. ++.+.+|+.|++++|.+....|...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhhh
Confidence 88888999999999998654 444 8889999999999999987776544
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=5.4e-12 Score=139.52 Aligned_cols=226 Identities=21% Similarity=0.272 Sum_probs=155.2
Q ss_pred CCcCcceeecccCeEEEEEEeCC--CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS--KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~--~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~l 498 (667)
.|...+.||+|+|+.|-...... ...+|+|.+.... ...........|..+-..+. |+|++++++.....+..++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 34555669999999998876533 3446666554432 11222334456777777777 9999999999999999999
Q ss_pred EEEecCCCChHHHh-cccc--------------------------CCcccccccCCeeecCCC-ceEEecccccccccC-
Q 042735 499 IYEYLKRGSLATNL-SNDA--------------------------AAEELDISSKNVLLDLEH-KAHVSDFGIAKFLKP- 549 (667)
Q Consensus 499 v~ey~~~g~L~~~l-~~~~--------------------------~~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~- 549 (667)
+.||..+|++...+ ..+. ..-+.|+||+|.+++..+ ..|++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999999998777 3221 111349999999999999 999999999987654
Q ss_pred CCC--Ccccccc-cccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC---C
Q 042735 550 DSS--NWSALVG-TYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR---L 616 (667)
Q Consensus 550 ~~~--~~~~~~G-t~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 616 (667)
... .....+| ++.|+|||. ....|+||.|+++.-+++|..||+......... ....... -
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-------~~~~~~~~~~~ 251 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-------SSWKSNKGRFT 251 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-------eeecccccccc
Confidence 222 1234578 999999993 346899999999999999999987443222110 0111110 0
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+... ......++..+++..+|..|.+.+++....+...
T Consensus 252 ~~~~~~---~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 252 QLPWNS---ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCcccc---CChhhhhcccccccCCchhccccccccccccccc
Confidence 111111 1113445556788899999999999887766654
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.11 E-value=1.1e-10 Score=131.03 Aligned_cols=113 Identities=34% Similarity=0.549 Sum_probs=100.7
Q ss_pred CcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCC
Q 042735 195 TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLS 274 (667)
Q Consensus 195 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 274 (667)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCccccchhhhcC-CCCCEEECcCCCCCCcCc
Q 042735 275 KYQFIQELPKELGKL-VQLSELELSHNFLGREIP 307 (667)
Q Consensus 275 ~n~~~~~~p~~l~~l-~~L~~L~l~~n~l~~~ip 307 (667)
+|++.+.+|..++.+ .++..+++.+|......|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999988764 467889999987544333
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.10 E-value=1.3e-10 Score=130.34 Aligned_cols=94 Identities=35% Similarity=0.531 Sum_probs=90.1
Q ss_pred ccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECc
Q 042735 219 SLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELS 298 (667)
Q Consensus 219 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~ 298 (667)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|++.+.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCcccccC
Q 042735 299 HNFLGREIPSQICS 312 (667)
Q Consensus 299 ~n~l~~~ip~~~~~ 312 (667)
+|.+.+.+|..+..
T Consensus 499 ~N~l~g~iP~~l~~ 512 (623)
T PLN03150 499 GNSLSGRVPAALGG 512 (623)
T ss_pred CCcccccCChHHhh
Confidence 99999999988765
No 458
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=1.5e-11 Score=123.64 Aligned_cols=208 Identities=25% Similarity=0.239 Sum_probs=119.2
Q ss_pred CCCCcEEeccCCcCcCCCC-ccccCCCCCCEEEccCccccccCC--ccccCCCCCCeeeccccccceeCCCCCc--cccc
Q 042735 2 LTNLRELHLRDNYLTGLIP-TETWNLKSLVKLGLGGNQFRGSLP--SSVGNLSSLRYLFLFENNLSGSIPPSVG--NLML 76 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~~~L 76 (667)
+.+|+...|.+..+..... .....|++++.|||++|-|..+.| .-...|++|+.|+|+.|++......... ..+|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 4556666666666643221 234466677777777776654322 2234566677777776666421111111 1234
Q ss_pred CEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCC
Q 042735 77 TVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDN 156 (667)
Q Consensus 77 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n 156 (667)
+.|.|+.|.++.. .+..++..+|+|+.|+|..|..-..-......+..|+.|||++|
T Consensus 200 K~L~l~~CGls~k-----------------------~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N 256 (505)
T KOG3207|consen 200 KQLVLNSCGLSWK-----------------------DVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNN 256 (505)
T ss_pred heEEeccCCCCHH-----------------------HHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCC
Confidence 5555555544311 22334556677777777777533344445566677788888877
Q ss_pred ccCCcc-CccCCCCCCCCEEEccCCcCCCC-cCcc-----ccCCCCcCeeeccCCccccc-CCccccCCcccceeecccc
Q 042735 157 NFFGEI-ASNWGKCPKLSTLNVSMNNITRS-IPLE-----IGNLSTLNEFDLSLNHIVGK-IPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 157 ~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~-~p~~-----~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n 228 (667)
.+.... -...+.++.|+.|+++.|.+... .|.. ....++|+.|+++.|++... .-..+..+++|+.|....|
T Consensus 257 ~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n 336 (505)
T KOG3207|consen 257 NLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLN 336 (505)
T ss_pred cccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccc
Confidence 764322 23456777788888887777643 2222 24567888888888887421 1123455677777777778
Q ss_pred cccc
Q 042735 229 QLIG 232 (667)
Q Consensus 229 ~l~~ 232 (667)
.++.
T Consensus 337 ~ln~ 340 (505)
T KOG3207|consen 337 YLNK 340 (505)
T ss_pred cccc
Confidence 7764
No 459
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=4.1e-11 Score=114.63 Aligned_cols=135 Identities=29% Similarity=0.285 Sum_probs=99.3
Q ss_pred hhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcc
Q 042735 140 EAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNS 219 (667)
Q Consensus 140 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 219 (667)
.....+..|+.||||+|.|. .+.++..-+|+++.|++++|.+... ..+..+++|+.||||+|.++. +..+=..|.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcC
Confidence 33444556778888888774 5666777778888888888888643 237778888889999888763 4444456778
Q ss_pred cceeecccccccccCcccccCCCCCCeeeccCCcCCccc-hhhhhcccCCCeecCCCccCcc
Q 042735 220 LTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLI-PESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 220 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
++.|.|+.|.+. .-+.+++|-+|..||+++|++...- -..+++++.|+++.|.+|.+.+
T Consensus 354 IKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 354 IKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred EeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 889999999874 2346778888999999999986531 3467888999999999888654
No 460
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.03 E-value=3.5e-10 Score=103.29 Aligned_cols=114 Identities=17% Similarity=0.109 Sum_probs=90.0
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC--CCeeEEEEEEEeCCceEEEEEec
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH--RNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.+.+|+|.++.||++...+ ..+++|....... ...+.+|+.++..++| +++++++++....+..+++|||+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 4678999999999999865 6789998754321 3468899999999987 59999999988888899999999
Q ss_pred CCCChHHH-----h-------------ccc--cCCcccccccCCeeecCCCceEEeccccccc
Q 042735 504 KRGSLATN-----L-------------SND--AAAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 504 ~~g~L~~~-----l-------------~~~--~~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+++.+... . +.. ....|.|++|+||+++..+.+++.|||.++.
T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99877421 0 110 0123459999999999989999999999875
No 461
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.03 E-value=1.8e-09 Score=106.49 Aligned_cols=121 Identities=15% Similarity=0.209 Sum_probs=87.6
Q ss_pred cceee-cccCeEEEEEEeCCCceEEEEecCCCCC-----C----chHHhHHHHHHHHHHHHhcCCCCe--eEEEEEEEeC
Q 042735 426 KYCIG-SGRHGSVYRAELPSKEFLAVKKFNSPLP-----S----DQIADQKEFFAEIEALTKIRHRNI--VKFYGFCSHA 493 (667)
Q Consensus 426 ~~~lg-~g~~g~vy~~~~~~~~~~avk~~~~~~~-----~----~~~~~~~~~~~E~~~l~~l~H~ni--v~~~g~~~~~ 493 (667)
...|| .|+.|+||++... +..++||.+..... . ........+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 66788887743210 0 011233568899999999998885 6777765432
Q ss_pred C----ceEEEEEecCC-CChHHHhcccc-------------------CCcccccccCCeeecCCCceEEecccccccc
Q 042735 494 R----HSILIYEYLKR-GSLATNLSNDA-------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 494 ~----~~~lv~ey~~~-g~L~~~l~~~~-------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
. ..++||||+++ .+|.+.+.... ...|.|+||.|||++.++.++|+|||.++..
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 2 23599999997 68877764322 1224499999999999999999999998763
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.03 E-value=8.1e-10 Score=118.55 Aligned_cols=128 Identities=17% Similarity=0.175 Sum_probs=87.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchH------------------------------------Hh
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQI------------------------------------AD 464 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~------------------------------------~~ 464 (667)
..|+ .+.||+|++|+||+|++.+|+.||||+........-. ..
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 4455 3679999999999999999999999997643211000 00
Q ss_pred HHHHHHHHHHHHhcC----CCCeeEEEEEEEe-CCceEEEEEecCCCChHHHhcccc-----------------------
Q 042735 465 QKEFFAEIEALTKIR----HRNIVKFYGFCSH-ARHSILIYEYLKRGSLATNLSNDA----------------------- 516 (667)
Q Consensus 465 ~~~~~~E~~~l~~l~----H~niv~~~g~~~~-~~~~~lv~ey~~~g~L~~~l~~~~----------------------- 516 (667)
+-.|.+|++.+.+++ |.+-|.+-.++.+ ....++||||++|++|.+......
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 113566776666653 3334444444432 345789999999999876543210
Q ss_pred CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 517 AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 517 ~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
..-|.|++|.||+++.++.+++.|||+++.+.+
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 011339999999999999999999999987653
No 463
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.00 E-value=2e-09 Score=102.50 Aligned_cols=118 Identities=22% Similarity=0.214 Sum_probs=78.6
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhH--------------------HHHHHHHHHHHhcCCCC--e
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQ--------------------KEFFAEIEALTKIRHRN--I 483 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~--------------------~~~~~E~~~l~~l~H~n--i 483 (667)
.+.||+|+||+||+|...+++.||||++............ .....|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3579999999999999888899999987643221111000 01135666677765443 4
Q ss_pred eEEEEEEEeCCceEEEEEecCCC-----ChHHHhc-------------------cccCCcccccccCCeeecCCCceEEe
Q 042735 484 VKFYGFCSHARHSILIYEYLKRG-----SLATNLS-------------------NDAAAEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g-----~L~~~l~-------------------~~~~~~~~dlk~~NiLld~~~~~kl~ 539 (667)
.+.+++ ...++||||+++| .+.+... ......|.|+||+||+++ ++.++++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~li 156 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYII 156 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEE
Confidence 455543 2468999999994 3332211 102233569999999999 9999999
Q ss_pred ccccccccc
Q 042735 540 DFGIAKFLK 548 (667)
Q Consensus 540 DFGla~~~~ 548 (667)
|||.+....
T Consensus 157 Dfg~a~~~~ 165 (187)
T cd05119 157 DVPQAVEID 165 (187)
T ss_pred ECccccccc
Confidence 999997543
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.99 E-value=6.9e-09 Score=112.67 Aligned_cols=128 Identities=16% Similarity=0.243 Sum_probs=89.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCc----------------------------h--------H
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSD----------------------------Q--------I 462 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~----------------------------~--------~ 462 (667)
..+|+. +.||+|++|+||+|++++ |+.||||+........ . .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 689999999999999987 9999999986432100 0 0
Q ss_pred HhHHHHHHHHHHHHhcC----CCCeeEEEEEEEe-CCceEEEEEecCCCChHHH--hcccc-------------------
Q 042735 463 ADQKEFFAEIEALTKIR----HRNIVKFYGFCSH-ARHSILIYEYLKRGSLATN--LSNDA------------------- 516 (667)
Q Consensus 463 ~~~~~~~~E~~~l~~l~----H~niv~~~g~~~~-~~~~~lv~ey~~~g~L~~~--l~~~~------------------- 516 (667)
..+-.|.+|++.+.+++ +.+.|.+-.++.+ ....++||||++|+.+.+. +....
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 00113556666665553 5556666565544 4567899999999999763 22211
Q ss_pred --CCcccccccCCeeecCCC----ceEEeccccccccc
Q 042735 517 --AAEELDISSKNVLLDLEH----KAHVSDFGIAKFLK 548 (667)
Q Consensus 517 --~~~~~dlk~~NiLld~~~----~~kl~DFGla~~~~ 548 (667)
..-|.|+||.||+++.++ .+++.|||++..+.
T Consensus 278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 111349999999999988 99999999998654
No 465
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=9.8e-11 Score=117.88 Aligned_cols=205 Identities=22% Similarity=0.270 Sum_probs=138.3
Q ss_pred CCccEEEeeCcccccccC-ccCCCCCCCcEEEccCCcccccc--chhhhcCCCCCEEECcCCccCCccCcc-CCCCCCCC
Q 042735 98 GALERVIVGGNHFRGPIP-KCLRNCPNLVRISLEGNNMRGTI--SEAFGIYLNLTFLDISDNNFFGEIASN-WGKCPKLS 173 (667)
Q Consensus 98 ~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~~~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~ 173 (667)
.+|+...+.+.......- .-...|++++.|+|+.|-+...- -.....+++|+.|+|+.|.+.-...+. -..+++|+
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 456666666665542211 24567888999999988776432 234567889999999999875333222 23578899
Q ss_pred EEEccCCcCCCC-cCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCc--ccccCCCCCCeeecc
Q 042735 174 TLNVSMNNITRS-IPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLP--SEIGSLTKLEFLNLS 250 (667)
Q Consensus 174 ~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls 250 (667)
.|.|+.|.++.. +......+|+|+.|+|..|...........-+..|+.|+|++|++.. .+ ...+.++.|+.|+++
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls 279 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLS 279 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhcc
Confidence 999999988632 11224457899999999885333333445667889999999998763 33 356788999999999
Q ss_pred CCcCCcc-chhh-----hhcccCCCeecCCCccCccccc--hhhhcCCCCCEEECcCCCCCC
Q 042735 251 TNRFSSL-IPES-----LGNLLKLHYLDLSKYQFIQELP--KELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 251 ~N~l~~~-~p~~-----~~~l~~L~~L~ls~n~~~~~~p--~~l~~l~~L~~L~l~~n~l~~ 304 (667)
.+.+.++ .|+. ...+++|++|+++.|++.. ++ ..+..+.+|+.|.+..|++..
T Consensus 280 ~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~-w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 280 STGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD-WRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccCcchhcCCCccchhhhcccccceeeecccCcccc-ccccchhhccchhhhhhcccccccc
Confidence 9888754 2333 3457888999999888632 22 245566777777777787754
No 466
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.97 E-value=2.4e-11 Score=119.06 Aligned_cols=136 Identities=24% Similarity=0.271 Sum_probs=82.1
Q ss_pred CCCCCCEEEccCCcCCCC----cCccccCCCCcCeeeccCCccccc----CCccccCCcccceeeccccccccc----Cc
Q 042735 168 KCPKLSTLNVSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVGK----IPKEFGKLNSLTKLILRGNQLIGH----LP 235 (667)
Q Consensus 168 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p 235 (667)
.-+.|+++..++|++... +...|...+.|+.+.+..|.+... +...|..+++|++|||.+|.++.. +-
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 345566666666665321 122344556677777777665321 123456677777777777776521 23
Q ss_pred ccccCCCCCCeeeccCCcCCccchhhh----h-cccCCCeecCCCccCccc----cchhhhcCCCCCEEECcCCCCC
Q 042735 236 SEIGSLTKLEFLNLSTNRFSSLIPESL----G-NLLKLHYLDLSKYQFIQE----LPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 236 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~-~l~~L~~L~ls~n~~~~~----~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
..+..+++|+.|+++++.+...-...| . ..++|+.|.+.+|.++.. +-..+...+.|..|+|++|.++
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 345566778888888777764432222 2 356788888888876532 2223456788888899998874
No 467
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.94 E-value=1.1e-09 Score=123.79 Aligned_cols=163 Identities=23% Similarity=0.314 Sum_probs=116.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC---CCCeeEEEEEEEeCCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR---HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~g~~~~~~~~ 496 (667)
-..|.+...||+|+||+||+|...+++.||+|.-+.+..- +|.--.+++.||+ -+-|..+...+.-.+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W-------EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW-------EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce-------eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3567788889999999999999888999999986544321 1222234455555 23444455555567778
Q ss_pred EEEEEecCCCChHHHhccccCC------------------------cccccccCCeeecC-------CCceEEecccccc
Q 042735 497 ILIYEYLKRGSLATNLSNDAAA------------------------EELDISSKNVLLDL-------EHKAHVSDFGIAK 545 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~~------------------------~~~dlk~~NiLld~-------~~~~kl~DFGla~ 545 (667)
++|+||.+.|+|.+.+...... .|-||||+|.||.. ...++|+|||.+-
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 8999999999999887643211 12399999999932 3458999999996
Q ss_pred cccC--CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCC
Q 042735 546 FLKP--DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKH 589 (667)
Q Consensus 546 ~~~~--~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~ 589 (667)
-+.. +.......++|-.+-.+| .+..+|-|.+.-+++-|+.|+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 4432 222344566777777777 4668999999999999999974
No 468
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.94 E-value=5e-10 Score=128.43 Aligned_cols=265 Identities=25% Similarity=0.264 Sum_probs=120.6
Q ss_pred CCcEEeccCCc--CcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCccc-ccCEEE
Q 042735 4 NLRELHLRDNY--LTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNL-MLTVLA 80 (667)
Q Consensus 4 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~-~L~~L~ 80 (667)
+|+.|-+..|. +..+....|..++.|++|||++|.=-+.+|+.++.|-+||+|+|++..+. .+|..++++ .|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 33333333455666666666665544456666666666666666666665 556555553 366666
Q ss_pred cccccccccCCccccCCCCccEEEeeCccc--ccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCC----EEECc
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHF--RGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLT----FLDIS 154 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~--~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~----~L~L~ 154 (667)
+..+.....++...+.+.+|++|.+..... ....-..+.++.+|+.|....... .+-..+..+++|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 665554434444445556666665544331 111112223333333333322211 0111122222222 22222
Q ss_pred CCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccC------CCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 155 DNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGN------LSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 155 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
++.. ...+.++..+.+|+.|.+.++.+....-..... ++++..+....+... ..+.+....++|+.|.+..+
T Consensus 703 ~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~ 780 (889)
T KOG4658|consen 703 GCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSC 780 (889)
T ss_pred cccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecc
Confidence 2111 233445566667777777666654321111110 111222222111111 11222234566777777766
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCcc-chhhhhcccCCCeecC
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSSL-IPESLGNLLKLHYLDL 273 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l 273 (667)
.....+.+....+..+..+-+..+.+.+. .-...+.++++..+.+
T Consensus 781 ~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 781 RLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred cccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 66555555555555555555555555554 2333344444444433
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.93 E-value=2.3e-10 Score=109.57 Aligned_cols=138 Identities=26% Similarity=0.259 Sum_probs=107.8
Q ss_pred cCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCC
Q 042735 114 IPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNL 193 (667)
Q Consensus 114 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 193 (667)
.-..+..+..|++|||++|.|+ .+.++..-.+.++.|++|+|.+.. ..++..+++|+.|+|++|.++. +...-.++
T Consensus 276 ~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KL 351 (490)
T KOG1259|consen 276 ALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--VQNLAELPQLQLLDLSGNLLAE-CVGWHLKL 351 (490)
T ss_pred eEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--ehhhhhcccceEeecccchhHh-hhhhHhhh
Confidence 3344555678889999999887 566778888899999999998853 3347788999999999998874 33444567
Q ss_pred CCcCeeeccCCcccccCCccccCCcccceeeccccccccc-CcccccCCCCCCeeeccCCcCCcc
Q 042735 194 STLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGH-LPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 194 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
-+++.|.|+.|.+.. -..++.|-+|..||+++|++... -...+|+||.|+.+.|.+|.+.+.
T Consensus 352 GNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 352 GNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred cCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 788999999998753 24577888999999999998632 235789999999999999999875
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.93 E-value=6e-11 Score=116.33 Aligned_cols=241 Identities=23% Similarity=0.251 Sum_probs=126.8
Q ss_pred CCCcEEeccCCcCcCC----CCccccCCCCCCEEEccCcc---ccccCCc-------cccCCCCCCeeeccccccceeCC
Q 042735 3 TNLRELHLRDNYLTGL----IPTETWNLKSLVKLGLGGNQ---FRGSLPS-------SVGNLSSLRYLFLFENNLSGSIP 68 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~---l~~~~p~-------~~~~l~~L~~L~L~~n~l~~~~p 68 (667)
..++.|+||+|.+... +...+.+.++|+.-++++-- +...+|+ ++...++|+.||||+|-+.-.-+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 3556666666666421 22333445566666665442 1112222 23344466666666665543322
Q ss_pred CCCcc-----cccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccc----cc
Q 042735 69 PSVGN-----LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGT----IS 139 (667)
Q Consensus 69 ~~~~~-----~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~----~~ 139 (667)
..+.. ..|+.|.|.+|.+...-...+.. .|..| . .-....+-++|+.+...+|++... +.
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l--~-------~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFEL--A-------VNKKAASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHH--H-------HHhccCCCcceEEEEeeccccccccHHHHH
Confidence 22221 23555666666553111000000 00000 0 011233445666666666665422 23
Q ss_pred hhhhcCCCCCEEECcCCccCCc----cCccCCCCCCCCEEEccCCcCCCC----cCccccCCCCcCeeeccCCcccccCC
Q 042735 140 EAFGIYLNLTFLDISDNNFFGE----IASNWGKCPKLSTLNVSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVGKIP 211 (667)
Q Consensus 140 ~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p 211 (667)
..|...+.|+.+.++.|.|... +..++..+++|+.|+|.+|-++.. +...+..++.|++|++++|.+...-.
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 3455556677777776665321 123456677777777777766532 23345566778888888777653322
Q ss_pred cc----c-cCCcccceeecccccccc----cCcccccCCCCCCeeeccCCcC
Q 042735 212 KE----F-GKLNSLTKLILRGNQLIG----HLPSEIGSLTKLEFLNLSTNRF 254 (667)
Q Consensus 212 ~~----~-~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l 254 (667)
.. + ...++|++|.|.+|.++. .+-..+...+.|..|+|++|.+
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 11 1 336788888888888763 2233455678899999999998
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.92 E-value=1e-09 Score=101.28 Aligned_cols=16 Identities=44% Similarity=0.530 Sum_probs=5.0
Q ss_pred cCCCCCCeeeccCCcC
Q 042735 239 GSLTKLEFLNLSTNRF 254 (667)
Q Consensus 239 ~~l~~L~~L~Ls~N~l 254 (667)
..+++|++|+|.+|.+
T Consensus 110 ~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 110 SSLPKLRVLSLEGNPV 125 (175)
T ss_dssp GG-TT--EEE-TT-GG
T ss_pred HcCCCcceeeccCCcc
Confidence 3444444444444444
No 472
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.91 E-value=8.6e-10 Score=83.56 Aligned_cols=61 Identities=41% Similarity=0.542 Sum_probs=56.6
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeecccccc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNL 63 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 63 (667)
++|+.|++++|+|+.+.+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999988888999999999999999999988889999999999999999975
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=1.4e-10 Score=124.62 Aligned_cols=196 Identities=24% Similarity=0.221 Sum_probs=91.7
Q ss_pred CCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC-ccCCCCCCCCEE
Q 042735 97 NGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA-SNWGKCPKLSTL 175 (667)
Q Consensus 97 ~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L 175 (667)
+.+|+.|++++|.|+... .+..++.|+.|++.+|.|+.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+
T Consensus 117 ~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l 191 (414)
T KOG0531|consen 117 LVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEEL 191 (414)
T ss_pred hhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHH
Confidence 334444444444444322 234445566666666665432 223335566666666665543222 1 3455556666
Q ss_pred EccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcc--cceeecccccccccCcccccCCCCCCeeeccCCc
Q 042735 176 NVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNS--LTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNR 253 (667)
Q Consensus 176 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 253 (667)
++.+|.+.... .+..+..+..+++..|.+...-+ +..+.. |+.+++++|++.. .+..+..+..+..|++.+|+
T Consensus 192 ~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~ 266 (414)
T KOG0531|consen 192 DLGGNSIREIE--GLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNR 266 (414)
T ss_pred hccCCchhccc--chHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcc
Confidence 66666554221 22233334444555555542211 122222 6666666666542 22445556666666666666
Q ss_pred CCccchhhhhcccCCCeecCCCccCccc---cchh-hhcCCCCCEEECcCCCCCC
Q 042735 254 FSSLIPESLGNLLKLHYLDLSKYQFIQE---LPKE-LGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 254 l~~~~p~~~~~l~~L~~L~ls~n~~~~~---~p~~-l~~l~~L~~L~l~~n~l~~ 304 (667)
+.... .+.....+..+....|.+... .... ....+.++.+.+..|+...
T Consensus 267 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 267 ISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 65431 222333444444444443211 1111 3345556666666665533
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.90 E-value=1.2e-09 Score=100.78 Aligned_cols=125 Identities=26% Similarity=0.274 Sum_probs=29.5
Q ss_pred cCCCCCCEEEccCccccccCCcccc-CCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccc-cCCCCcc
Q 042735 24 WNLKSLVKLGLGGNQFRGSLPSSVG-NLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNI-CRNGALE 101 (667)
Q Consensus 24 ~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~-~~~~~L~ 101 (667)
.+...+++|+|++|+|+. + +.++ .+.+|+.|+|++|.|+. ++..-....|+.|+|++|.++.. ...+ ..+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LEGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-ccCccChhhhhhcccCCCCCCcc-ccchHHhCCcCC
Confidence 345566777777777663 2 3344 46667777777776652 33322223455555555555422 1111 1233444
Q ss_pred EEEeeCccccccc-CccCCCCCCCcEEEccCCccccccc---hhhhcCCCCCEEE
Q 042735 102 RVIVGGNHFRGPI-PKCLRNCPNLVRISLEGNNMRGTIS---EAFGIYLNLTFLD 152 (667)
Q Consensus 102 ~L~l~~n~~~~~~-p~~l~~l~~L~~L~L~~n~~~~~~~---~~~~~l~~L~~L~ 152 (667)
.|++++|++...- -..+..+++|+.|+|.+|.++.... ..+..+++|+.||
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 4444444443211 0233445555555555555543211 1234445555544
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=2e-10 Score=123.37 Aligned_cols=244 Identities=24% Similarity=0.233 Sum_probs=133.3
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEE
Q 042735 26 LKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVI 104 (667)
Q Consensus 26 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 104 (667)
+..++.++++.|.|.. +-..+..+++|+.|++.+|+|... ...+.. .+|++|+|++|.++... .+..+..|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 4444445555555442 223344555555555555555422 111221 33555555555554322 122334466666
Q ss_pred eeCcccccccCccCCCCCCCcEEEccCCccccccc-hhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC
Q 042735 105 VGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTIS-EAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 105 l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 183 (667)
+.+|.++.. ..+..+++|+.+++++|.+...-+ . ...+.+++.+.+.+|.+.. ...+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 666666533 234557777777777777765433 2 4666777777777777632 333344455555577777765
Q ss_pred CCcCccccCCC--CcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCcc---c
Q 042735 184 RSIPLEIGNLS--TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSL---I 258 (667)
Q Consensus 184 ~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~ 258 (667)
..-+ +..+. .|+.+++++|.+.. .+..+..+..+..|++.+|++... ..+.....+..+.+..|.+... .
T Consensus 222 ~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (414)
T KOG0531|consen 222 KLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAIS 296 (414)
T ss_pred eccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhh
Confidence 4322 22222 37788888887653 235566777788888888876532 2334455666666666666532 1
Q ss_pred hhh-hhcccCCCeecCCCccCccccc
Q 042735 259 PES-LGNLLKLHYLDLSKYQFIQELP 283 (667)
Q Consensus 259 p~~-~~~l~~L~~L~ls~n~~~~~~p 283 (667)
... ......++.+.+..|......+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 297 QEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccccccccccccccccCccccccc
Confidence 111 3445667777777776554444
No 476
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.74 E-value=4.9e-09 Score=120.39 Aligned_cols=125 Identities=21% Similarity=0.186 Sum_probs=68.1
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCcc--ccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQ--FRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
.+...+-+|.+..+ +.. .+.++|++|-+.+|. +....++.|..++.|+.|||++|.=-+.+|..++. .+|++|+|
T Consensus 525 ~rr~s~~~~~~~~~-~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIEHI-AGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchhhc-cCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccc
Confidence 34445555555432 222 234466666666664 44333334556677777777666544566666665 34666666
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCC
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGN 132 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 132 (667)
++..++ .+|..+.++..|.+|++..+.....+|.....|++|++|.+...
T Consensus 603 ~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 603 SDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 666665 55555555566666665555444344444444556665555433
No 477
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.69 E-value=1.4e-08 Score=76.85 Aligned_cols=59 Identities=31% Similarity=0.436 Sum_probs=29.4
Q ss_pred CCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCc
Q 042735 123 NLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNN 181 (667)
Q Consensus 123 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 181 (667)
+|++|++++|+++...+..|..+++|++|++++|.+....+..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554444455555555555555555544444444555555555554443
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.65 E-value=2.7e-08 Score=105.37 Aligned_cols=215 Identities=24% Similarity=0.259 Sum_probs=142.1
Q ss_pred CcCcceeec--ccCeEEEEEEe---CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCce
Q 042735 423 FDAKYCIGS--GRHGSVYRAEL---PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHS 496 (667)
Q Consensus 423 f~~~~~lg~--g~~g~vy~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~ 496 (667)
|.....+|. |.+|.||.+.. .++..+|+|+-+...... .....=.+|+....+++ |+|.|+.+..+...+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p--~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP--LDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc--cccccccchhhcccccCccccccccCcccccCCcc
Confidence 455667899 99999999965 457778998754432211 11223456777777887 99999999999999999
Q ss_pred EEEEEecCCCChHHHhccc-----------------c----C--------CcccccccCCeeecCC-CceEEeccccccc
Q 042735 497 ILIYEYLKRGSLATNLSND-----------------A----A--------AEELDISSKNVLLDLE-HKAHVSDFGIAKF 546 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~-----------------~----~--------~~~~dlk~~NiLld~~-~~~kl~DFGla~~ 546 (667)
++-.|++. .++..+-+.. . + ..+.|+||.||.+..+ ...+++|||+...
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 99999887 4554332210 0 1 1123999999999988 8899999999987
Q ss_pred ccCCCCCc-----ccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCC---CccCCCChhhhhhhhccccC
Q 042735 547 LKPDSSNW-----SALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGF---VSSILPSPSVINMRLDEMLD 613 (667)
Q Consensus 547 ~~~~~~~~-----~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~---~~~~~~~~~~~~~~~~~~~~ 613 (667)
+....-.. ....|-..|++|| |+.++|+||+|.+..|-.+|...... ..|..- +...
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~---------r~~~- 342 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL---------RQGY- 342 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---------cccc-
Confidence 66543111 1125677899999 56789999999999999998765321 122110 0100
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042735 614 PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQ 654 (667)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~ 654 (667)
++.. .+.....++.......++.+|..|++.+.++..
T Consensus 343 --ip~e--~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 343 --IPLE--FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --Cchh--hhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1100 000111122224557799999999999887754
No 479
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.51 E-value=4.4e-07 Score=84.72 Aligned_cols=111 Identities=22% Similarity=0.229 Sum_probs=78.0
Q ss_pred ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCee-EEEEEEEeCCceEEEEEecCC
Q 042735 427 YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIV-KFYGFCSHARHSILIYEYLKR 505 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~~~g~~~~~~~~~lv~ey~~~ 505 (667)
+.++.|.++.||+++.. +..+++|....... ....+.+|++++..+.+.+++ +++++. ....++||||+++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 45788999999999875 66799998654321 112466889999888765544 455443 3345899999999
Q ss_pred CChHHH-----------------hccccC----CcccccccCCeeecCCCceEEeccccccc
Q 042735 506 GSLATN-----------------LSNDAA----AEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 506 g~L~~~-----------------l~~~~~----~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
.++... ++.... ..|.|++|.||+++ ++.+++.|||.+..
T Consensus 76 ~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 887531 111111 14569999999999 67899999999864
No 480
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.47 E-value=6.1e-08 Score=94.62 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=105.7
Q ss_pred HHHHhcCCCCeeEEEEEEEeCC-----ceEEEEEecCCCChHHHhccccC------------------------------
Q 042735 473 EALTKIRHRNIVKFYGFCSHAR-----HSILIYEYLKRGSLATNLSNDAA------------------------------ 517 (667)
Q Consensus 473 ~~l~~l~H~niv~~~g~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~------------------------------ 517 (667)
+-+-.+.|-|||+++.|+.+.+ ....+.|||..|++..+|++.+.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 4566778999999999986543 46788999999999988865321
Q ss_pred CcccccccCCeeecCCCceEEecccccccccCC----CCCcccccccccccCCCCC------CCchHHHHHHHHHHHHhC
Q 042735 518 AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD----SSNWSALVGTYRYVAPDYR------KKCDVYSFRVLALEVIKG 587 (667)
Q Consensus 518 ~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~----~~~~~~~~Gt~~y~aPE~~------~~~DV~sfGvvl~ElltG 587 (667)
+.+-++..+-|.+..+|-+|+.--.....-... ......-.|-++|-||||. ..+|||+||...+||..|
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 111277788899998888888532111110000 0011223467899999974 478999999999999988
Q ss_pred CCC-CCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 588 KHP-RGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 588 ~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..- ....+.+.... -+...........+. +.+..|++..|..||+|.+++.|+...
T Consensus 279 Eiq~tnseS~~~~ee---------~ia~~i~~len~lqr------~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEE---------NIANVIIGLENGLQR------GSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred eeccCCCcceeehhh---------hhhhheeeccCcccc------CcCcccccCCCCCCcchhhhhcCceee
Confidence 742 22111111100 000000000111111 234489999999999999998875443
No 481
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.43 E-value=5.8e-09 Score=111.18 Aligned_cols=127 Identities=27% Similarity=0.284 Sum_probs=83.9
Q ss_pred CccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEcc
Q 042735 99 ALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVS 178 (667)
Q Consensus 99 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 178 (667)
.|...+.+.|.+. .+..++.-++.|+.|+|+.|+++.. +.+..+++|++|||++|++....--...++. |..|+++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3444455555554 3445566677788888888887643 3677778888888888887543222233444 8888888
Q ss_pred CCcCCCCcCccccCCCCcCeeeccCCcccccCC-ccccCCcccceeeccccccc
Q 042735 179 MNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIP-KEFGKLNSLTKLILRGNQLI 231 (667)
Q Consensus 179 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~ 231 (667)
+|.++.. ..+.+|.+|+.||+++|-+.+.-. .-++.|..|+.|+|.+|.+.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8877643 247788888888888887764321 22566777888888888764
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.40 E-value=2e-07 Score=98.88 Aligned_cols=220 Identities=20% Similarity=0.202 Sum_probs=141.8
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe--CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL--PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR 494 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~ 494 (667)
.-+.+|.....||.|.|+.||+... .++..+++|......... .+...-..|+-+...+. |.+++.++..+...+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~--~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF--ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch--HhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3456888899999999999999865 457789999876543321 11122235555555554 999999988888888
Q ss_pred ceEEEEEecCCCChHHHhc------cc------------------cCCcccccccCCeeecCC-CceEEecccccccccC
Q 042735 495 HSILIYEYLKRGSLATNLS------ND------------------AAAEELDISSKNVLLDLE-HKAHVSDFGIAKFLKP 549 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~------~~------------------~~~~~~dlk~~NiLld~~-~~~kl~DFGla~~~~~ 549 (667)
..|+=-|||++++...... .+ ....++|+||+||++..+ +.-+++|||.+..+..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce
Confidence 8889999999998764331 10 011245999999999876 7889999999875322
Q ss_pred CCCCccccccccccc--CCC------CCCCchHHHHHHHHHHHHhCCCCC-CCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 550 DSSNWSALVGTYRYV--APD------YRKKCDVYSFRVLALEVIKGKHPR-GFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~--aPE------~~~~~DV~sfGvvl~ElltG~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
. ..+..++-+++ +++ +..++|+||||..+.|.+||..-. ....|. .+..-.-+..+...
T Consensus 420 ~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---------~i~~~~~p~~~~~~ 487 (524)
T KOG0601|consen 420 S---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---------TIRSGDTPNLPGLK 487 (524)
T ss_pred e---cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---------eeecccccCCCchH
Confidence 1 12233333444 332 457899999999999999997531 111111 00111111122111
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+..++......++..||.+.+...+..|.
T Consensus 488 -------~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 488 -------LQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred -------HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 1223344456788999999998888776654
No 483
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.38 E-value=1.3e-08 Score=108.48 Aligned_cols=126 Identities=29% Similarity=0.242 Sum_probs=70.4
Q ss_pred CCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecc
Q 042735 147 NLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILR 226 (667)
Q Consensus 147 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 226 (667)
.|.+.+.+.|.+. .+..++.-++.|+.|+|++|+++..- .+..|+.|++|||++|.+....--...++. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3555555566553 34455556666677777777665432 456666677777777766532111222333 6667777
Q ss_pred cccccccCcccccCCCCCCeeeccCCcCCccc-hhhhhcccCCCeecCCCccC
Q 042735 227 GNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLI-PESLGNLLKLHYLDLSKYQF 278 (667)
Q Consensus 227 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~n~~ 278 (667)
+|.++. -..+.+|.+|+.||+++|-+.+.- -..++.+..|+.|+|.+|.+
T Consensus 241 nN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 776642 124556666677777776665431 11234455666666666654
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.32 E-value=1.1e-07 Score=106.22 Aligned_cols=233 Identities=19% Similarity=0.244 Sum_probs=141.5
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..++|...+-+-+|.++.++-+.-. .+...+.|.......... .+.+...++-.++-..+||.+++..-.+......+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~-~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT-NDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhcc-ccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 4466777777888999999887543 233333333221100000 00111223333444456788887766655667789
Q ss_pred EEEEecCCCChHHHhcccc-----C-------------------CcccccccCCeeecCCCceEEecccccccccC----
Q 042735 498 LIYEYLKRGSLATNLSNDA-----A-------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKP---- 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-----~-------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~---- 549 (667)
+|++|..+|++...|+... + ..+.|++|.|++...+++.+++|||.......
T Consensus 881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 9999999999988876432 0 12349999999999999999999984432110
Q ss_pred --C----C---------------------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCcc
Q 042735 550 --D----S---------------------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSS 596 (667)
Q Consensus 550 --~----~---------------------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~ 596 (667)
. . .......||+.|.||| ....+|+|++|++++|.++|.+|+.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 0 0 0012457999999999 34578999999999999999999863321
Q ss_pred CCCChhhhhhhhccccCC--CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHH---HHHHHHHHhhhhhc
Q 042735 597 ILPSPSVINMRLDEMLDP--RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQ---TITQQLLFSLVYFS 663 (667)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~---ev~~~l~~~~~~~~ 663 (667)
. . + .+.+... .++..... ...+..+++.+-+..+|.+|-.|. ++..+.+|.-+.++
T Consensus 1041 q---~-~----f~ni~~~~~~~p~g~~~---~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1041 Q---Q-I----FENILNRDIPWPEGPEE---GSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred h---h-h----hhccccCCCCCCCCccc---cChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence 1 1 1 1122211 12111111 111223344456788999997776 77777777666554
No 485
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=4.8e-08 Score=93.97 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=50.4
Q ss_pred CCCCCEEEccCccccccC-Ccccc-CCCCCCeeecccccccee--CCCCCcc-cccCEEEcccccccccCCccccCCCCc
Q 042735 26 LKSLVKLGLGGNQFRGSL-PSSVG-NLSSLRYLFLFENNLSGS--IPPSVGN-LMLTVLALENNHFTGNLRHNICRNGAL 100 (667)
Q Consensus 26 l~~L~~L~L~~n~l~~~~-p~~~~-~l~~L~~L~L~~n~l~~~--~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L 100 (667)
+.-++.|-|.++.|...- -..|+ ..+.++.|||.+|+|++. +-..+.. +.|++|+|+.|.+...+...-....+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 344445555555554211 11222 245566777777766531 1111222 346666666666654443332334455
Q ss_pred cEEEeeCcccccc-cCccCCCCCCCcEEEccCCc
Q 042735 101 ERVIVGGNHFRGP-IPKCLRNCPNLVRISLEGNN 133 (667)
Q Consensus 101 ~~L~l~~n~~~~~-~p~~l~~l~~L~~L~L~~n~ 133 (667)
+.|.+.+..+.-. ....+.++|.++.|+++.|+
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNS 157 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccch
Confidence 5555554444221 22334455555555555553
No 486
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.29 E-value=6.7e-06 Score=88.45 Aligned_cols=144 Identities=12% Similarity=0.115 Sum_probs=98.6
Q ss_pred EeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecCCCC--------h----
Q 042735 441 ELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLKRGS--------L---- 508 (667)
Q Consensus 441 ~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~~g~--------L---- 508 (667)
+..++..|.|..++.... .......+-++.++.+|||||++|+..+...+..|+|.|-+.--. .
T Consensus 33 ~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~ 108 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRPLETVLKELGKEEVCL 108 (690)
T ss_pred eeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccccHHHHHHHhHHHHHHH
Confidence 455677888887754322 112335567788999999999999999999999999999764221 1
Q ss_pred --H------HHhccccCCcccccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCCCCCC----chHHH
Q 042735 509 --A------TNLSNDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDYRKK----CDVYS 576 (667)
Q Consensus 509 --~------~~l~~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~~~~----~DV~s 576 (667)
+ .+|.++....|-+|.-+.|.+++.|+.||++|-++..............--..|..|+-..+ .|.|-
T Consensus 109 Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~~~ 188 (690)
T KOG1243|consen 109 GLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDSWG 188 (690)
T ss_pred HHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccchhhhh
Confidence 0 12334445556689999999999999999999888654322210011111123556653333 49999
Q ss_pred HHHHHHHHHhCC
Q 042735 577 FRVLALEVIKGK 588 (667)
Q Consensus 577 fGvvl~ElltG~ 588 (667)
||++++|++.|.
T Consensus 189 Lg~li~el~ng~ 200 (690)
T KOG1243|consen 189 LGCLIEELFNGS 200 (690)
T ss_pred HHHHHHHHhCcc
Confidence 999999999994
No 487
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.29 E-value=4.3e-06 Score=76.20 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=81.6
Q ss_pred eeecccCeEEEEEEeCCCceEEEEec-CCCCCC---chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 428 CIGSGRHGSVYRAELPSKEFLAVKKF-NSPLPS---DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~~~~~avk~~-~~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.+++|+-+.+|.+.+.+.. +.+|.- ++.+.. ++.-..+.-.+|++++++++---|-.-+=+..+++...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4788999999999874433 555532 332221 11122346788999999887544444444556788889999999
Q ss_pred CCCChHHHhcccc-----------------CCcccccccCCeeecCCCceEEecccccccc
Q 042735 504 KRGSLATNLSNDA-----------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 504 ~~g~L~~~l~~~~-----------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
+|-.|.+.+.... ...|-|+.++||++..+. +.+.|||++...
T Consensus 82 ~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9998887776541 112339999999997654 999999999853
No 488
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=3.3e-07 Score=88.33 Aligned_cols=103 Identities=18% Similarity=0.116 Sum_probs=61.8
Q ss_pred EEeccCCcCcCCCCc-cc-cCCCCCCEEEccCccccccC--CccccCCCCCCeeeccccccceeCCCC-CcccccCEEEc
Q 042735 7 ELHLRDNYLTGLIPT-ET-WNLKSLVKLGLGGNQFRGSL--PSSVGNLSSLRYLFLFENNLSGSIPPS-VGNLMLTVLAL 81 (667)
Q Consensus 7 ~L~L~~n~l~~~~p~-~~-~~l~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~~~L~~L~L 81 (667)
.|.+.++.|..+... .| ...+.++.|||.+|+|+.+. -.-+.+|+.|++|+|+.|.+...+-.. +...+|++|.|
T Consensus 49 llvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVL 128 (418)
T KOG2982|consen 49 LLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVL 128 (418)
T ss_pred hheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEE
Confidence 455556655433221 12 25678889999999988542 234568899999999999886332222 22346888888
Q ss_pred ccccccccCCc-cccCCCCccEEEeeCcc
Q 042735 82 ENNHFTGNLRH-NICRNGALERVIVGGNH 109 (667)
Q Consensus 82 ~~n~l~~~~~~-~~~~~~~L~~L~l~~n~ 109 (667)
.+.++...--. .+..++.++.|.++.|+
T Consensus 129 NgT~L~w~~~~s~l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 129 NGTGLSWTQSTSSLDDLPKVTELHMSDNS 157 (418)
T ss_pred cCCCCChhhhhhhhhcchhhhhhhhccch
Confidence 88887643222 22334455555555553
No 489
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=3.4e-07 Score=88.29 Aligned_cols=175 Identities=21% Similarity=0.213 Sum_probs=72.2
Q ss_pred CcEEEccCCccccc-cchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCC--cCccccCCCCcCeee
Q 042735 124 LVRISLEGNNMRGT-ISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRS--IPLEIGNLSTLNEFD 200 (667)
Q Consensus 124 L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~ 200 (667)
|+.|||++..|+.. +...+..+.+|+.|.|.++++...+...+..-.+|+.|+|+.+.--.. ...-+.+++.|..|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 45555555444321 112233444455555555555444444444444555555554421100 111234455555555
Q ss_pred ccCCcccccCCcc-ccC-Ccccceeecccccc---cccCcccccCCCCCCeeeccCCcCCc-cchhhhhcccCCCeecCC
Q 042735 201 LSLNHIVGKIPKE-FGK-LNSLTKLILRGNQL---IGHLPSEIGSLTKLEFLNLSTNRFSS-LIPESLGNLLKLHYLDLS 274 (667)
Q Consensus 201 L~~n~l~~~~p~~-~~~-l~~L~~L~L~~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls 274 (667)
|+.|.+....... +.+ -++|..|+|+++.- ...+..-...+++|..|||++|.--. ..-..|..++.|++|.++
T Consensus 267 lsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSls 346 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLS 346 (419)
T ss_pred chHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehh
Confidence 5555433221110 000 13445555554321 01111112345556666665543221 111223345555555555
Q ss_pred CccCccccchh---hhcCCCCCEEECcCC
Q 042735 275 KYQFIQELPKE---LGKLVQLSELELSHN 300 (667)
Q Consensus 275 ~n~~~~~~p~~---l~~l~~L~~L~l~~n 300 (667)
.| .+.+|.. +...+.|.+|++.++
T Consensus 347 RC--Y~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 347 RC--YDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hh--cCCChHHeeeeccCcceEEEEeccc
Confidence 44 2344443 334455555555443
No 490
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=8.7e-08 Score=92.27 Aligned_cols=175 Identities=19% Similarity=0.224 Sum_probs=92.0
Q ss_pred CCcEEeccCCcCcCC-CCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccc-ccee-CCCCCcc-cccCEE
Q 042735 4 NLRELHLRDNYLTGL-IPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENN-LSGS-IPPSVGN-LMLTVL 79 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~-~p~~~~~-~~L~~L 79 (667)
.|+.||||+..|+.- .-.-++.+++|+.|.|.++++++.+-..+++-.+|+.|+|+.+. ++.. ..-.+.+ ..|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 477888888877631 12234568888888888888888888888888888888888763 2210 0000111 237777
Q ss_pred EcccccccccCCc-cccC-CCCccEEEeeCcc---cccccCccCCCCCCCcEEEccCCc-cccccchhhhcCCCCCEEEC
Q 042735 80 ALENNHFTGNLRH-NICR-NGALERVIVGGNH---FRGPIPKCLRNCPNLVRISLEGNN-MRGTISEAFGIYLNLTFLDI 153 (667)
Q Consensus 80 ~L~~n~l~~~~~~-~~~~-~~~L~~L~l~~n~---~~~~~p~~l~~l~~L~~L~L~~n~-~~~~~~~~~~~l~~L~~L~L 153 (667)
+|+-|.+.-..-. .+.. ..+|+.|+++|.. ....+..-...+|+|..|||++|. ++...-..|-.++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 7777765432111 0100 2345555555431 111111223445666666665543 22222234445555555555
Q ss_pred cCCccCCccCc---cCCCCCCCCEEEccCC
Q 042735 154 SDNNFFGEIAS---NWGKCPKLSTLNVSMN 180 (667)
Q Consensus 154 ~~n~l~~~~~~---~~~~l~~L~~L~L~~n 180 (667)
+.|.. .+|. .+...+.|.+|++.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 55532 2332 2234444555554443
No 491
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.88 E-value=3.9e-05 Score=74.91 Aligned_cols=81 Identities=11% Similarity=0.154 Sum_probs=59.6
Q ss_pred ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC--CCeeEEEEEEEeCC---ceEEEEE
Q 042735 427 YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH--RNIVKFYGFCSHAR---HSILIYE 501 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~g~~~~~~---~~~lv~e 501 (667)
+.++.|..+.||+++..+|..+++|........ .....+.+|++++..+++ .++.+++++..... ..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 468999999999998877678999986543211 123457889999999876 44567777766542 5689999
Q ss_pred ecCCCChHH
Q 042735 502 YLKRGSLAT 510 (667)
Q Consensus 502 y~~~g~L~~ 510 (667)
|++|+++.+
T Consensus 81 ~i~G~~l~~ 89 (223)
T cd05154 81 RVDGRVLRD 89 (223)
T ss_pred EeCCEecCC
Confidence 999887643
No 492
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.87 E-value=7.7e-07 Score=76.15 Aligned_cols=81 Identities=28% Similarity=0.438 Sum_probs=35.5
Q ss_pred CCCEEEccCCcCCCCcCcccc-CCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeec
Q 042735 171 KLSTLNVSMNNITRSIPLEIG-NLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNL 249 (667)
Q Consensus 171 ~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 249 (667)
.|...+|++|.+.. +|..|. ..+.++.|+|++|+++ .+|.++..++.|+.|+++.|.+. ..|..+..|.+|-.|+.
T Consensus 54 el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 54 ELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred eEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 34444555555442 222222 2234444555555444 23444444555555555555443 33333334444444444
Q ss_pred cCCcC
Q 042735 250 STNRF 254 (667)
Q Consensus 250 s~N~l 254 (667)
.+|.+
T Consensus 131 ~~na~ 135 (177)
T KOG4579|consen 131 PENAR 135 (177)
T ss_pred CCCcc
Confidence 44444
No 493
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.86 E-value=1.1e-05 Score=55.93 Aligned_cols=36 Identities=44% Similarity=0.596 Sum_probs=15.8
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCcccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFR 40 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 40 (667)
+|++|++++|+|+.+ |..+.+|++|++|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~~l-~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDL-PPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSH-GGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCccc-CchHhCCCCCCEEEecCCCCC
Confidence 444555555555432 333444555555555555444
No 494
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.86 E-value=3.1e-06 Score=80.75 Aligned_cols=243 Identities=19% Similarity=0.133 Sum_probs=117.7
Q ss_pred CCCcEEeccCCcCcCCC----CccccCCCCCCEEEccCcccc---ccCC-------ccccCCCCCCeeeccccccceeCC
Q 042735 3 TNLRELHLRDNYLTGLI----PTETWNLKSLVKLGLGGNQFR---GSLP-------SSVGNLSSLRYLFLFENNLSGSIP 68 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~L~~n~l~---~~~p-------~~~~~l~~L~~L~L~~n~l~~~~p 68 (667)
..++.++||+|.|...- ...+.+-++|++.+++.-... ..++ .++.++++|+..+||+|.+....|
T Consensus 30 d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~~ 109 (388)
T COG5238 30 DELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEFP 109 (388)
T ss_pred cceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcccc
Confidence 34566666666664321 222334456666665554221 1112 134455666666666666654444
Q ss_pred CCCcc-----cccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccc----
Q 042735 69 PSVGN-----LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTIS---- 139 (667)
Q Consensus 69 ~~~~~-----~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~---- 139 (667)
..++. ..|..|.|++|.+...-...+++ .|.. + ..-+-..+-|.|+......|++..-..
T Consensus 110 e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~~--l-------a~nKKaa~kp~Le~vicgrNRlengs~~~~a 178 (388)
T COG5238 110 EELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALFH--L-------AYNKKAADKPKLEVVICGRNRLENGSKELSA 178 (388)
T ss_pred hHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHHH--H-------HHHhhhccCCCceEEEeccchhccCcHHHHH
Confidence 43321 23666666666553111111110 0000 0 000112344566666666666532211
Q ss_pred hhhhcCCCCCEEECcCCccCCccC-----ccCCCCCCCCEEEccCCcCCCC----cCccccCCCCcCeeeccCCcccccC
Q 042735 140 EAFGIYLNLTFLDISDNNFFGEIA-----SNWGKCPKLSTLNVSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 140 ~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~ 210 (667)
..+..-.+|+++.+..|.|...-. -....+.+|+.|+|.+|.++-. +...+...+.|++|.+.+|-++..-
T Consensus 179 ~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G 258 (388)
T COG5238 179 ALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEG 258 (388)
T ss_pred HHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcccc
Confidence 112222456666666665432100 1123456677777777766521 2222334455777777777665332
Q ss_pred Ccc----c--cCCcccceeecccccccccCccc-------ccCCCCCCeeeccCCcCCc
Q 042735 211 PKE----F--GKLNSLTKLILRGNQLIGHLPSE-------IGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 211 p~~----~--~~l~~L~~L~L~~n~l~~~~p~~-------~~~l~~L~~L~Ls~N~l~~ 256 (667)
..+ | ...++|+.|-..+|...+.+-.. -+.+|-|..|.+.+|++..
T Consensus 259 ~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 259 VKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred HHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 221 1 12466777777777654432211 1457788888888898864
No 495
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.84 E-value=9.5e-05 Score=69.82 Aligned_cols=116 Identities=19% Similarity=0.279 Sum_probs=75.0
Q ss_pred ceeecccCeEEEEEEeCC-------CceEEEEecCCCCC----------Cch--------HHhHHHH----HHHHHHHHh
Q 042735 427 YCIGSGRHGSVYRAELPS-------KEFLAVKKFNSPLP----------SDQ--------IADQKEF----FAEIEALTK 477 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~-------~~~~avk~~~~~~~----------~~~--------~~~~~~~----~~E~~~l~~ 477 (667)
.+||.|.-+.||.|.-.+ +..+|||..+.... .+. ....+.+ .+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 46899997753210 000 0001223 389999998
Q ss_pred cCC--CCeeEEEEEEEeCCceEEEEEecCCCChHH-Hhc------------------------cccCCcccccccCCeee
Q 042735 478 IRH--RNIVKFYGFCSHARHSILIYEYLKRGSLAT-NLS------------------------NDAAAEELDISSKNVLL 530 (667)
Q Consensus 478 l~H--~niv~~~g~~~~~~~~~lv~ey~~~g~L~~-~l~------------------------~~~~~~~~dlk~~NiLl 530 (667)
+.- -++-+.+++ ...++||||+.++.+.. .+. ......|-|+++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 863 456666654 45789999998753311 110 01112244999999999
Q ss_pred cCCCceEEecccccccc
Q 042735 531 DLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 531 d~~~~~kl~DFGla~~~ 547 (667)
+ ++.+.++|||.+-..
T Consensus 159 ~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 159 H-DGKVWFIDVSQSVEP 174 (197)
T ss_pred E-CCcEEEEECCCceeC
Confidence 7 578999999987643
No 496
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.81 E-value=0.00018 Score=65.51 Aligned_cols=121 Identities=18% Similarity=0.169 Sum_probs=79.4
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecC-CCCC---CchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFN-SPLP---SDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~-~~~~---~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
....+-+|+-+.|+++.+. |+.+.||.-. +.+. .++.-..++..+|++++.+++--.|..-.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5567899999999999884 5556666432 2221 122223457889999999887444444444555666677899
Q ss_pred EecCCC-ChHHHhccccC--------------------------CcccccccCCeeecCCC---ceEEeccccccc
Q 042735 501 EYLKRG-SLATNLSNDAA--------------------------AEELDISSKNVLLDLEH---KAHVSDFGIAKF 546 (667)
Q Consensus 501 ey~~~g-~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~---~~kl~DFGla~~ 546 (667)
||+++- ++.+++..... ..|-||..+||++..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999873 45555532110 11229999999996544 457999999864
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.81 E-value=0.00034 Score=75.97 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=87.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCC---------------------Cc-----h----------HH
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLP---------------------SD-----Q----------IA 463 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~---------------------~~-----~----------~~ 463 (667)
.+.|+. ..|+.++-|+||+|++.+|+.||||+...... .. - ..
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 345543 57899999999999999999999998764321 00 0 01
Q ss_pred hHHHHHHHHHHHHhc----CCCCeeEEEEEEEe-CCceEEEEEecCCCChHHHh--ccccCC------------------
Q 042735 464 DQKEFFAEIEALTKI----RHRNIVKFYGFCSH-ARHSILIYEYLKRGSLATNL--SNDAAA------------------ 518 (667)
Q Consensus 464 ~~~~~~~E~~~l~~l----~H~niv~~~g~~~~-~~~~~lv~ey~~~g~L~~~l--~~~~~~------------------ 518 (667)
.+-.|.+|+.-+.++ ++.-=|++-.+|++ .....++|||++|-.+.+.. ......
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 112355666655554 34444555555554 56678999999998887653 221111
Q ss_pred ---cccccccCCeeecCCCceEEecccccccccC
Q 042735 519 ---EELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 519 ---~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
-|-|..|.||+++.+|+.-+-|||+.....+
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 1239999999999999999999999876543
No 498
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.80 E-value=1.6e-05 Score=55.09 Aligned_cols=38 Identities=39% Similarity=0.537 Sum_probs=32.7
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCeeeccccccce
Q 042735 27 KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSG 65 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 65 (667)
++|++|+|++|+|+ .+|..+++|++|++|++++|+|+.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence 57999999999999 567789999999999999999974
No 499
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.80 E-value=3.9e-06 Score=80.05 Aligned_cols=239 Identities=17% Similarity=0.142 Sum_probs=143.6
Q ss_pred CCCCCCEEEccCccccccCC----ccccCCCCCCeeecccccc---ceeCCCCCcccccCEEEcccccccccCCccccCC
Q 042735 25 NLKSLVKLGLGGNQFRGSLP----SSVGNLSSLRYLFLFENNL---SGSIPPSVGNLMLTVLALENNHFTGNLRHNICRN 97 (667)
Q Consensus 25 ~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l---~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 97 (667)
.+..+..++||+|.|...-- ..+.+-.+|+..++++-.. ...+|..+. .+-..+.++
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~----------------~Ll~aLlkc 91 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLV----------------MLLKALLKC 91 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHH----------------HHHHHHhcC
Confidence 36677777777777763222 2334445666666554311 111121111 111234455
Q ss_pred CCccEEEeeCcccccccCc----cCCCCCCCcEEEccCCccccccch-------------hhhcCCCCCEEECcCCccCC
Q 042735 98 GALERVIVGGNHFRGPIPK----CLRNCPNLVRISLEGNNMRGTISE-------------AFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 98 ~~L~~L~l~~n~~~~~~p~----~l~~l~~L~~L~L~~n~~~~~~~~-------------~~~~l~~L~~L~L~~n~l~~ 160 (667)
+.|+..+++.|.|....|. -++.-+.|.+|.|++|.+.-.--. -...-+.|++.....|++..
T Consensus 92 p~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlen 171 (388)
T COG5238 92 PRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLEN 171 (388)
T ss_pred CcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhcc
Confidence 6666666666666555553 345667888888888876321111 12355789999999998742
Q ss_pred ccC----ccCCCCCCCCEEEccCCcCCCC-----cCccccCCCCcCeeeccCCccccc----CCccccCCcccceeeccc
Q 042735 161 EIA----SNWGKCPKLSTLNVSMNNITRS-----IPLEIGNLSTLNEFDLSLNHIVGK----IPKEFGKLNSLTKLILRG 227 (667)
Q Consensus 161 ~~~----~~~~~l~~L~~L~L~~n~l~~~-----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~ 227 (667)
-.. ..+..-..|+.+.+.+|.|... .-..+..+.+|+.|||.+|.++.. +...+..++.|+.|.+.+
T Consensus 172 gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnD 251 (388)
T COG5238 172 GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLND 251 (388)
T ss_pred CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccc
Confidence 111 1223335789999999987532 011245678999999999988632 234466778899999999
Q ss_pred ccccccCccc----cc--CCCCCCeeeccCCcCCccc------hhhh-hcccCCCeecCCCccCc
Q 042735 228 NQLIGHLPSE----IG--SLTKLEFLNLSTNRFSSLI------PESL-GNLLKLHYLDLSKYQFI 279 (667)
Q Consensus 228 n~l~~~~p~~----~~--~l~~L~~L~Ls~N~l~~~~------p~~~-~~l~~L~~L~ls~n~~~ 279 (667)
|-++..-..+ |. ..++|..|-..+|...+-+ |... .+++-|..|.+.+|++.
T Consensus 252 Clls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 252 CLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred hhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 9776322221 22 3578999999998775432 2221 24667778888888753
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.74 E-value=1.8e-06 Score=73.99 Aligned_cols=103 Identities=20% Similarity=0.167 Sum_probs=50.3
Q ss_pred cEEeccCCcCcCC--CCccccCCCCCCEEEccCccccccCCcccc-CCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 6 RELHLRDNYLTGL--IPTETWNLKSLVKLGLGGNQFRGSLPSSVG-NLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 6 ~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
-.++|+++.+..+ .+........|...+|++|.+. .+|..|. ..+-++.|+|++|.|+ .+|..+.. ..|+.|++
T Consensus 30 h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 30 HFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 3455555555422 1122233444555566666655 3444333 3335566666666655 34444444 23666666
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFR 111 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~ 111 (667)
+.|.+.. .|.-+..+.++..|+..+|...
T Consensus 108 ~~N~l~~-~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 108 RFNPLNA-EPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccCcccc-chHHHHHHHhHHHhcCCCCccc
Confidence 6665542 2333444555555555555543
Done!