Query 042735
Match_columns 667
No_of_seqs 507 out of 4714
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:34:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 3.3E-46 1.1E-50 379.4 17.8 232 421-663 36-303 (307)
2 4gt4_A Tyrosine-protein kinase 100.0 8.6E-46 3E-50 378.0 18.4 223 421-657 26-303 (308)
3 4aoj_A High affinity nerve gro 100.0 1.4E-45 4.8E-50 380.0 19.7 225 421-660 41-319 (329)
4 4b9d_A Serine/threonine-protei 100.0 3.5E-46 1.2E-50 384.5 11.9 228 420-660 23-283 (350)
5 4fih_A Serine/threonine-protei 100.0 4.3E-46 1.5E-50 383.2 12.2 227 421-660 74-330 (346)
6 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-45 3.8E-50 375.6 14.7 223 421-658 13-287 (299)
7 3fpq_A Serine/threonine-protei 100.0 9.7E-45 3.3E-49 365.9 16.5 223 424-659 29-288 (290)
8 4fie_A Serine/threonine-protei 100.0 1.3E-44 4.4E-49 381.4 15.3 227 421-660 151-407 (423)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.4E-45 1.5E-49 370.1 8.5 231 421-664 32-301 (311)
10 3hyh_A Carbon catabolite-derep 100.0 6.4E-44 2.2E-48 356.7 15.1 229 420-663 12-272 (275)
11 3ubd_A Ribosomal protein S6 ki 100.0 8.2E-45 2.8E-49 368.2 8.0 229 421-663 24-291 (304)
12 4ase_A Vascular endothelial gr 100.0 1.7E-43 5.7E-48 367.5 16.8 228 420-660 63-347 (353)
13 3hmm_A TGF-beta receptor type- 100.0 1.6E-43 5.4E-48 362.2 16.2 231 422-659 4-296 (303)
14 4g3f_A NF-kappa-beta-inducing 100.0 1.7E-43 5.9E-48 362.8 15.4 223 420-661 57-317 (336)
15 3rgz_A Protein brassinosteroid 100.0 2.5E-41 8.4E-46 391.4 27.3 327 3-329 294-723 (768)
16 4g31_A Eukaryotic translation 100.0 1.1E-42 3.7E-47 354.2 13.2 228 420-663 4-289 (299)
17 3rgz_A Protein brassinosteroid 100.0 2.6E-40 8.8E-45 382.8 28.0 319 1-319 267-685 (768)
18 4b99_A Mitogen-activated prote 100.0 7.2E-40 2.5E-44 346.1 16.8 237 421-660 54-351 (398)
19 3v5w_A G-protein coupled recep 100.0 2.1E-39 7.3E-44 356.6 14.0 233 420-663 188-459 (689)
20 4f9c_A Cell division cycle 7-r 100.0 8E-39 2.7E-43 334.6 15.8 234 420-660 20-359 (361)
21 3uto_A Twitchin; kinase, muscl 100.0 2.3E-38 7.8E-43 351.1 16.0 230 420-662 156-419 (573)
22 3v47_A TOLL-like receptor 5B a 100.0 1.7E-37 5.7E-42 338.1 22.2 303 3-305 30-410 (455)
23 2id5_A Lingo-1, leucine rich r 100.0 5.2E-36 1.8E-40 328.3 25.0 302 3-304 32-334 (477)
24 4eco_A Uncharacterized protein 100.0 1.7E-36 5.7E-41 343.1 20.5 312 1-319 204-571 (636)
25 2c30_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 314.7 17.4 239 409-660 23-301 (321)
26 3fxz_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 311.4 15.2 226 421-659 20-275 (297)
27 4eco_A Uncharacterized protein 100.0 5.9E-36 2E-40 338.6 21.9 303 1-311 247-586 (636)
28 3p86_A Serine/threonine-protei 100.0 9.7E-36 3.3E-40 306.6 19.9 227 420-659 36-297 (309)
29 3vq2_A TLR4, TOLL-like recepto 100.0 7E-35 2.4E-39 329.2 28.5 170 145-315 349-522 (606)
30 2qkw_B Protein kinase; three-h 100.0 4.2E-36 1.4E-40 311.4 16.8 242 414-661 32-316 (321)
31 3uim_A Brassinosteroid insensi 100.0 3.3E-36 1.1E-40 312.9 15.0 245 409-658 18-309 (326)
32 2nru_A Interleukin-1 receptor- 100.0 6.5E-35 2.2E-39 300.4 24.4 246 409-658 13-304 (307)
33 1o6l_A RAC-beta serine/threoni 100.0 9.1E-36 3.1E-40 310.0 16.4 231 420-663 4-270 (337)
34 3t6q_A CD180 antigen; protein- 100.0 2.4E-34 8.3E-39 324.8 29.3 316 3-319 33-405 (606)
35 3vq2_A TLR4, TOLL-like recepto 100.0 1E-34 3.5E-39 327.9 25.7 315 3-319 32-502 (606)
36 3fe3_A MAP/microtubule affinit 100.0 8.7E-36 3E-40 309.2 14.8 226 420-660 14-271 (328)
37 3t6q_A CD180 antigen; protein- 100.0 5.5E-34 1.9E-38 321.9 30.1 317 2-319 128-505 (606)
38 3soc_A Activin receptor type-2 100.0 1.3E-35 4.5E-40 307.7 15.2 233 421-660 24-318 (322)
39 3zgw_A Maternal embryonic leuc 100.0 1.8E-35 6.1E-40 308.7 16.0 227 420-661 9-268 (347)
40 3soa_A Calcium/calmodulin-depe 100.0 1.9E-35 6.4E-40 318.6 16.4 231 420-660 10-274 (444)
41 4ecn_A Leucine-rich repeat pro 100.0 8.4E-35 2.9E-39 335.0 22.9 308 1-317 446-809 (876)
42 3niz_A Rhodanese family protei 100.0 3.3E-35 1.1E-39 303.1 17.5 233 421-661 21-308 (311)
43 4dc2_A Protein kinase C IOTA t 100.0 9.9E-36 3.4E-40 315.4 13.8 237 420-663 51-328 (396)
44 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.6E-36 2.3E-40 313.1 12.3 232 419-663 21-290 (353)
45 3s95_A LIMK-1, LIM domain kina 100.0 8.8E-35 3E-39 299.9 20.4 228 421-661 10-283 (310)
46 3v47_A TOLL-like receptor 5B a 100.0 2.3E-34 7.8E-39 313.3 24.7 308 6-317 13-398 (455)
47 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-34 7.2E-39 319.1 24.6 307 3-319 21-449 (520)
48 3a62_A Ribosomal protein S6 ki 100.0 2E-35 6.9E-40 306.9 15.3 231 420-662 16-285 (327)
49 2yab_A Death-associated protei 100.0 2.1E-35 7.1E-40 310.1 15.2 231 421-660 12-279 (361)
50 2psq_A Fibroblast growth facto 100.0 8.1E-35 2.8E-39 307.4 19.6 227 421-661 81-365 (370)
51 2bdw_A Hypothetical protein K1 100.0 5.4E-35 1.8E-39 307.7 17.2 229 420-659 28-290 (362)
52 3kul_A Ephrin type-A receptor 100.0 1E-34 3.6E-39 301.2 18.8 229 421-663 49-316 (325)
53 1tki_A Titin; serine kinase, m 100.0 2.8E-35 9.4E-40 304.8 14.4 226 421-660 5-264 (321)
54 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-35 3.5E-40 309.3 10.9 228 420-664 8-269 (336)
55 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.4E-34 2.5E-38 317.6 26.8 298 3-309 52-491 (562)
56 3a8x_A Protein kinase C IOTA t 100.0 3.2E-35 1.1E-39 307.2 14.7 237 420-663 8-285 (345)
57 2zv2_A Calcium/calmodulin-depe 100.0 5E-35 1.7E-39 299.9 15.4 229 420-658 12-297 (298)
58 4ecn_A Leucine-rich repeat pro 100.0 2E-34 6.7E-39 331.9 21.4 292 19-319 440-781 (876)
59 3v8s_A RHO-associated protein 100.0 2E-36 6.8E-41 322.6 4.2 239 416-663 64-339 (410)
60 2id5_A Lingo-1, leucine rich r 100.0 1.1E-33 3.7E-38 309.9 25.8 310 6-318 14-324 (477)
61 3c0i_A Peripheral plasma membr 100.0 1.9E-35 6.5E-40 310.1 11.2 231 421-660 24-293 (351)
62 3qd2_B Eukaryotic translation 100.0 5.3E-35 1.8E-39 304.3 14.3 225 419-659 4-331 (332)
63 1ob3_A PFPK5, cell division co 100.0 5.9E-35 2E-39 297.8 14.1 236 421-659 2-286 (288)
64 2y0a_A Death-associated protei 100.0 6.1E-35 2.1E-39 303.1 14.2 230 421-659 11-277 (326)
65 1xjd_A Protein kinase C, theta 100.0 2E-35 6.8E-40 308.3 10.4 232 419-663 15-279 (345)
66 4fr4_A YANK1, serine/threonine 100.0 4.7E-35 1.6E-39 309.1 13.4 233 420-663 14-281 (384)
67 4aw2_A Serine/threonine-protei 100.0 8.8E-36 3E-40 320.0 7.9 244 413-664 66-349 (437)
68 3q4u_A Activin receptor type-1 100.0 2E-34 6.8E-39 295.8 17.6 229 421-658 8-300 (301)
69 3cbl_A C-FES, proto-oncogene t 100.0 9.5E-35 3.3E-39 307.9 15.6 226 421-660 114-374 (377)
70 2qol_A Ephrin receptor; recept 100.0 2.1E-34 7.2E-39 304.5 17.9 226 421-660 45-309 (373)
71 2pmi_A Negative RE, cyclin-dep 100.0 5.4E-35 1.9E-39 302.4 12.6 240 420-663 4-303 (317)
72 3lb7_A RAF proto-oncogene seri 100.0 3.7E-34 1.3E-38 294.6 18.7 232 421-663 36-303 (307)
73 1fot_A TPK1 delta, CAMP-depend 100.0 5E-35 1.7E-39 302.1 12.2 228 420-663 5-268 (318)
74 3tki_A Serine/threonine-protei 100.0 5E-35 1.7E-39 303.3 12.3 229 420-660 6-268 (323)
75 3kn6_A Ribosomal protein S6 ki 100.0 5.1E-35 1.7E-39 303.5 12.2 227 426-660 16-277 (325)
76 3hko_A Calcium/calmodulin-depe 100.0 9.4E-35 3.2E-39 304.4 14.4 236 418-661 23-338 (345)
77 2z63_A TOLL-like receptor 4, v 100.0 2E-33 6.8E-38 314.9 25.8 175 144-319 345-523 (570)
78 2z63_A TOLL-like receptor 4, v 100.0 1.8E-33 6.2E-38 315.2 25.4 314 4-319 29-499 (570)
79 4euu_A Serine/threonine-protei 100.0 7.2E-34 2.5E-38 294.3 20.4 236 421-660 9-309 (319)
80 4hcu_A Tyrosine-protein kinase 100.0 3.3E-34 1.1E-38 289.3 17.1 223 421-659 10-265 (269)
81 2vd5_A DMPK protein; serine/th 100.0 1.9E-35 6.5E-40 315.2 8.4 243 413-664 53-338 (412)
82 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-33 5.6E-38 329.2 25.4 303 2-304 23-376 (844)
83 3o0g_A Cell division protein k 100.0 2.7E-34 9.2E-39 293.6 16.4 237 421-660 2-289 (292)
84 2i0e_A Protein kinase C-beta I 100.0 7.4E-35 2.5E-39 304.9 12.1 232 419-663 18-286 (353)
85 3dtc_A Mitogen-activated prote 100.0 3.4E-34 1.2E-38 289.4 16.5 224 421-657 7-270 (271)
86 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-34 4.6E-39 303.3 14.0 228 420-661 52-313 (349)
87 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.6E-34 1.9E-38 287.3 17.4 222 421-658 8-262 (268)
88 2x4f_A Myosin light chain kina 100.0 1.6E-34 5.5E-39 305.2 13.9 225 424-661 92-350 (373)
89 3l9p_A Anaplastic lymphoma kin 100.0 3.8E-34 1.3E-38 302.0 16.5 227 421-661 71-346 (367)
90 4eqm_A Protein kinase; transfe 100.0 3.3E-34 1.1E-38 293.2 15.5 229 421-658 11-273 (294)
91 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-34 5E-39 302.7 12.7 228 420-663 40-303 (350)
92 3vhe_A Vascular endothelial gr 100.0 2.5E-34 8.6E-39 302.9 14.6 228 419-659 20-354 (359)
93 3gxj_A TGF-beta receptor type- 100.0 4.9E-35 1.7E-39 300.6 8.9 230 421-659 3-296 (303)
94 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-33 9.7E-38 310.1 23.8 306 1-318 43-472 (520)
95 4ejn_A RAC-alpha serine/threon 100.0 9.1E-35 3.1E-39 315.2 11.5 231 420-663 147-414 (446)
96 3uc3_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 300.0 17.0 225 421-659 20-280 (361)
97 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-34 7.9E-39 315.6 14.4 235 420-663 184-458 (543)
98 4agu_A Cyclin-dependent kinase 100.0 6.6E-34 2.3E-38 293.4 17.0 239 420-660 2-291 (311)
99 2y7j_A Phosphorylase B kinase 100.0 5.8E-34 2E-38 300.4 16.7 235 415-658 88-364 (365)
100 2r5t_A Serine/threonine-protei 100.0 9.4E-35 3.2E-39 306.3 10.4 231 420-663 37-303 (373)
101 3p1a_A MYT1 kinase, membrane-a 100.0 4.8E-34 1.6E-38 294.4 15.4 221 421-658 57-309 (311)
102 2acx_A G protein-coupled recep 100.0 2.2E-34 7.5E-39 316.5 13.6 234 420-663 183-454 (576)
103 1kob_A Twitchin; kinase, intra 100.0 3.7E-34 1.3E-38 303.3 14.8 228 420-660 50-311 (387)
104 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-34 7E-39 300.7 12.4 227 420-659 21-283 (342)
105 1u5q_A Serine/threonine protei 100.0 7E-34 2.4E-38 297.5 16.3 223 421-659 54-311 (348)
106 3tt0_A Basic fibroblast growth 100.0 1.7E-33 5.8E-38 298.9 19.4 226 421-660 69-352 (382)
107 1ziw_A TOLL-like receptor 3; i 100.0 7.9E-33 2.7E-37 316.7 26.4 249 3-251 25-305 (680)
108 2y94_A 5'-AMP-activated protei 100.0 4.3E-34 1.5E-38 310.0 15.0 227 421-661 16-274 (476)
109 1qcf_A Haematopoetic cell kina 100.0 5.6E-34 1.9E-38 309.5 15.9 223 420-659 187-443 (454)
110 3ugc_A Tyrosine-protein kinase 100.0 4.5E-34 1.5E-38 292.3 14.2 232 421-660 10-291 (295)
111 3gen_A Tyrosine-protein kinase 100.0 1.2E-33 3.9E-38 287.5 17.1 224 420-659 23-279 (283)
112 3f3z_A Calcium/calmodulin-depe 100.0 5.1E-34 1.7E-38 289.1 14.2 230 420-662 8-270 (277)
113 3mdy_A Bone morphogenetic prot 100.0 2.5E-33 8.4E-38 292.5 19.6 232 420-660 36-331 (337)
114 4f0f_A Serine/threonine-protei 100.0 2.8E-33 9.4E-38 285.3 19.3 224 421-657 19-286 (287)
115 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-34 4.3E-39 304.4 9.4 235 420-662 53-330 (355)
116 1luf_A Muscle-specific tyrosin 100.0 1.3E-33 4.5E-38 295.4 17.1 228 420-661 46-336 (343)
117 3cok_A Serine/threonine-protei 100.0 3.4E-34 1.2E-38 290.6 12.2 228 420-660 10-269 (278)
118 3kmu_A ILK, integrin-linked ki 100.0 2E-33 6.9E-38 283.5 17.7 221 420-658 9-268 (271)
119 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.5E-33 2.2E-37 310.0 23.6 297 1-307 74-514 (562)
120 1ziw_A TOLL-like receptor 3; i 100.0 2.8E-32 9.5E-37 312.2 29.2 301 3-303 222-573 (680)
121 3gni_B Strad alpha; kinase fol 100.0 9E-34 3.1E-38 302.0 15.7 240 420-661 24-341 (389)
122 2eue_A Carbon catabolite derep 100.0 1.4E-33 4.7E-38 285.6 16.3 228 420-662 12-271 (275)
123 2zmd_A Dual specificity protei 100.0 1.7E-33 5.7E-38 299.4 17.5 226 421-659 56-326 (390)
124 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-33 7.2E-38 304.5 18.6 219 420-659 192-444 (450)
125 1nxk_A MAP kinase-activated pr 100.0 2.3E-33 7.9E-38 299.2 18.6 227 420-660 60-328 (400)
126 3poz_A Epidermal growth factor 100.0 1.7E-33 5.7E-38 292.6 17.0 224 421-659 15-277 (327)
127 2ivs_A Proto-oncogene tyrosine 100.0 2.6E-33 9E-38 289.3 18.4 226 420-659 22-310 (314)
128 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-33 8.8E-38 289.0 17.9 249 27-278 50-303 (313)
129 2eva_A TAK1 kinase - TAB1 chim 100.0 3E-33 1E-37 288.0 18.3 222 421-663 8-266 (307)
130 3a7i_A MST3 kinase, serine/thr 100.0 3.1E-33 1E-37 287.3 18.2 226 421-660 22-277 (303)
131 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.1E-34 1.7E-38 296.7 12.5 242 419-663 32-328 (329)
132 3j0a_A TOLL-like receptor 5; m 100.0 7.6E-33 2.6E-37 323.6 23.9 307 2-308 47-522 (844)
133 3kk8_A Calcium/calmodulin depe 100.0 1.3E-33 4.6E-38 287.1 15.1 229 421-660 6-268 (284)
134 2w5a_A Serine/threonine-protei 100.0 5E-34 1.7E-38 289.5 11.9 228 420-660 5-274 (279)
135 2a2a_A Death-associated protei 100.0 1.3E-33 4.4E-38 292.6 14.8 231 421-660 12-279 (321)
136 3dbq_A Dual specificity protei 100.0 2.2E-33 7.5E-38 293.7 16.5 226 421-659 9-279 (343)
137 2z81_A CD282 antigen, TOLL-lik 100.0 5.1E-33 1.8E-37 310.1 20.5 157 4-160 27-210 (549)
138 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-33 4.9E-38 309.2 15.7 223 420-658 219-476 (495)
139 1rjb_A FL cytokine receptor; k 100.0 2.4E-33 8.3E-38 293.5 16.7 228 420-660 44-334 (344)
140 2clq_A Mitogen-activated prote 100.0 4.2E-33 1.4E-37 285.0 17.9 226 421-659 22-284 (295)
141 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-33 8.1E-38 304.2 16.7 221 421-658 184-438 (452)
142 3nyv_A Calmodulin-domain prote 100.0 1.1E-33 3.6E-38 310.3 14.1 231 421-661 26-289 (484)
143 1t46_A HOMO sapiens V-KIT hard 100.0 4.1E-33 1.4E-37 287.7 17.6 227 421-660 23-307 (313)
144 3mtl_A Cell division protein k 100.0 4.2E-34 1.4E-38 296.7 10.0 237 421-661 2-289 (324)
145 3lij_A Calcium/calmodulin depe 100.0 1.4E-33 4.9E-38 309.8 14.8 229 421-660 37-298 (494)
146 3ork_A Serine/threonine protei 100.0 3.5E-34 1.2E-38 295.5 9.3 230 421-659 12-279 (311)
147 3i6u_A CDS1, serine/threonine- 100.0 7.7E-34 2.6E-38 305.0 12.3 234 419-661 133-407 (419)
148 3fdn_A Serine/threonine-protei 100.0 1.7E-33 5.7E-38 285.7 14.1 227 420-661 8-265 (279)
149 1mp8_A Focal adhesion kinase 1 100.0 5.2E-33 1.8E-37 282.4 17.6 225 421-660 15-276 (281)
150 1ua2_A CAK, cell division prot 100.0 2.5E-33 8.7E-38 293.6 15.7 242 418-660 7-298 (346)
151 3oz6_A Mitogen-activated prote 100.0 1.3E-33 4.5E-38 300.6 13.7 234 419-660 7-335 (388)
152 3is5_A Calcium-dependent prote 100.0 7.6E-34 2.6E-38 289.1 11.4 225 421-658 22-283 (285)
153 1ogq_A PGIP-2, polygalacturona 100.0 4.1E-33 1.4E-37 287.4 16.9 248 51-301 50-302 (313)
154 2pvf_A Fibroblast growth facto 100.0 8E-33 2.7E-37 288.4 19.2 227 421-661 35-319 (334)
155 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-33 7.6E-38 290.4 14.8 238 423-665 33-315 (318)
156 4g8a_A TOLL-like receptor 4; l 100.0 6.2E-32 2.1E-36 306.6 28.1 310 4-313 53-565 (635)
157 2ac3_A MAP kinase-interacting 100.0 1.8E-33 6.3E-38 290.8 14.1 239 421-663 12-305 (316)
158 3o6n_A APL1; leucine-rich repe 100.0 3.6E-32 1.2E-36 289.7 24.5 288 2-304 44-332 (390)
159 3rp9_A Mitogen-activated prote 100.0 2.4E-33 8.3E-38 305.2 15.7 240 421-663 53-406 (458)
160 2rku_A Serine/threonine-protei 100.0 3.6E-33 1.2E-37 285.5 16.0 230 421-663 15-275 (294)
161 4aaa_A Cyclin-dependent kinase 100.0 1.4E-33 4.9E-38 293.6 13.0 241 420-662 24-315 (331)
162 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-33 7.9E-38 308.9 15.3 232 420-660 35-308 (504)
163 3dls_A PAS domain-containing s 100.0 9.7E-34 3.3E-38 295.0 11.5 221 420-659 23-280 (335)
164 3mwu_A Calmodulin-domain prote 100.0 1.8E-33 6.1E-38 308.5 14.0 230 421-661 22-284 (486)
165 3bhy_A Death-associated protei 100.0 2.7E-33 9.3E-38 284.7 14.3 232 421-661 5-273 (283)
166 1b6c_B TGF-B superfamily recep 100.0 6.7E-33 2.3E-37 289.9 17.5 233 420-661 41-337 (342)
167 3kex_A Receptor tyrosine-prote 100.0 5.6E-33 1.9E-37 288.3 16.7 224 421-659 13-275 (325)
168 3eqc_A Dual specificity mitoge 100.0 3.5E-33 1.2E-37 294.3 15.3 235 421-662 33-333 (360)
169 2owb_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 290.9 15.3 230 421-663 41-301 (335)
170 3c1x_A Hepatocyte growth facto 100.0 3.4E-33 1.2E-37 294.9 15.1 228 422-663 90-358 (373)
171 3t9t_A Tyrosine-protein kinase 100.0 5.3E-33 1.8E-37 280.0 15.5 223 421-659 8-263 (267)
172 1t4h_A Serine/threonine-protei 100.0 6.9E-33 2.4E-37 282.8 16.6 224 423-659 28-288 (290)
173 3qup_A Tyrosine-protein kinase 100.0 5.7E-33 2E-37 288.0 16.2 225 421-658 23-296 (323)
174 3og7_A AKAP9-BRAF fusion prote 100.0 4.3E-33 1.5E-37 284.2 15.0 227 421-658 24-286 (289)
175 2wqm_A Serine/threonine-protei 100.0 1.1E-32 3.9E-37 284.0 18.2 232 420-660 31-297 (310)
176 3ttj_A Mitogen-activated prote 100.0 3.3E-33 1.1E-37 303.4 14.5 236 420-659 61-361 (464)
177 3oja_B Anopheles plasmodium-re 100.0 5.2E-32 1.8E-36 304.5 24.7 288 2-304 50-338 (597)
178 1u59_A Tyrosine-protein kinase 100.0 1.8E-32 6.2E-37 279.2 19.0 224 422-660 10-272 (287)
179 2i1m_A Macrophage colony-stimu 100.0 6.6E-33 2.3E-37 288.8 15.9 228 420-660 45-326 (333)
180 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-33 4.4E-38 319.9 11.2 230 419-663 339-607 (674)
181 3com_A Serine/threonine-protei 100.0 5.4E-33 1.8E-37 287.0 14.8 226 420-660 28-285 (314)
182 2jam_A Calcium/calmodulin-depe 100.0 4.7E-33 1.6E-37 286.1 14.1 225 421-659 9-267 (304)
183 2yex_A Serine/threonine-protei 100.0 4.1E-33 1.4E-37 282.2 13.4 231 419-661 5-269 (276)
184 2ozo_A Tyrosine-protein kinase 100.0 1.4E-32 4.8E-37 308.5 19.0 217 428-659 343-597 (613)
185 1phk_A Phosphorylase kinase; g 100.0 6.5E-33 2.2E-37 284.1 14.8 235 420-663 16-293 (298)
186 2xir_A Vascular endothelial gr 100.0 1.7E-32 5.9E-37 283.4 18.1 230 419-661 25-311 (316)
187 1mqb_A Ephrin type-A receptor 100.0 2.3E-32 7.8E-37 284.7 19.1 226 421-660 44-309 (333)
188 2izr_A Casein kinase I isoform 100.0 2.4E-33 8.1E-38 291.8 11.6 227 421-659 9-280 (330)
189 3g2f_A Bone morphogenetic prot 100.0 8.2E-33 2.8E-37 288.5 15.7 236 420-663 12-321 (336)
190 3mi9_A Cell division protein k 100.0 8.6E-33 3E-37 290.2 16.0 238 420-661 16-319 (351)
191 4eut_A Serine/threonine-protei 100.0 1.1E-32 3.7E-37 294.1 16.8 235 421-659 9-308 (396)
192 3n9x_A Phosphotransferase; mal 100.0 6.4E-33 2.2E-37 299.2 15.2 240 421-663 26-371 (432)
193 4fmz_A Internalin; leucine ric 100.0 2.5E-31 8.7E-36 278.5 26.9 293 2-317 43-336 (347)
194 4fvq_A Tyrosine-protein kinase 100.0 5.7E-33 1.9E-37 283.2 13.8 217 421-658 8-273 (289)
195 3llt_A Serine/threonine kinase 100.0 9.3E-33 3.2E-37 291.0 15.8 229 420-657 34-359 (360)
196 3lxl_A Tyrosine-protein kinase 100.0 1.1E-32 3.8E-37 286.4 16.0 228 421-658 23-301 (327)
197 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-31 5.7E-36 278.1 24.9 286 4-300 34-330 (332)
198 2vgo_A Serine/threonine-protei 100.0 1E-32 3.5E-37 280.6 15.1 226 420-660 13-269 (284)
199 3cc6_A Protein tyrosine kinase 100.0 2.6E-32 8.9E-37 277.2 18.0 225 420-659 11-272 (281)
200 2h6d_A 5'-AMP-activated protei 100.0 9.9E-33 3.4E-37 279.4 14.8 231 421-665 11-273 (276)
201 2h34_A Serine/threonine-protei 100.0 8.1E-33 2.8E-37 285.0 14.3 227 420-658 33-294 (309)
202 4e5w_A Tyrosine-protein kinase 100.0 1.1E-32 3.8E-37 282.9 15.2 229 421-658 21-300 (302)
203 1p4o_A Insulin-like growth fac 100.0 1.8E-32 6.2E-37 284.1 16.5 226 419-658 23-297 (322)
204 3pls_A Macrophage-stimulating 100.0 4.8E-32 1.7E-36 277.6 19.3 228 422-663 22-290 (298)
205 2h8h_A Proto-oncogene tyrosine 100.0 8.2E-33 2.8E-37 306.0 14.6 221 421-658 267-521 (535)
206 2j7t_A Serine/threonine-protei 100.0 2.1E-33 7.2E-38 288.4 9.0 227 421-660 19-282 (302)
207 3kfa_A Tyrosine-protein kinase 100.0 2.1E-32 7.3E-37 278.8 16.4 223 420-658 12-269 (288)
208 1xku_A Decorin; proteoglycan, 100.0 5.1E-31 1.7E-35 274.2 27.0 288 4-301 32-330 (330)
209 2x7f_A TRAF2 and NCK-interacti 100.0 3.1E-33 1.1E-37 290.4 10.1 228 418-660 21-293 (326)
210 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-32 4.6E-37 280.0 14.4 220 420-659 10-285 (289)
211 1qpc_A LCK kinase; alpha beta 100.0 4.6E-32 1.6E-36 275.0 18.3 221 421-658 13-267 (279)
212 2xrw_A Mitogen-activated prote 100.0 1.5E-32 5.1E-37 290.5 15.1 235 421-659 25-324 (371)
213 2yfx_A Tyrosine-protein kinase 100.0 2.7E-32 9.2E-37 283.5 16.7 226 421-660 30-304 (327)
214 3f66_A Hepatocyte growth facto 100.0 4.9E-32 1.7E-36 277.6 18.4 229 421-663 25-294 (298)
215 3g33_A Cell division protein k 100.0 1.3E-32 4.5E-37 283.3 14.2 239 420-660 8-303 (308)
216 1cm8_A Phosphorylated MAP kina 100.0 1.1E-32 3.9E-37 290.6 13.9 233 421-660 25-314 (367)
217 2ycf_A Serine/threonine-protei 100.0 7.7E-33 2.6E-37 286.9 12.4 232 420-660 9-281 (322)
218 4fmz_A Internalin; leucine ric 100.0 9.3E-31 3.2E-35 274.2 28.3 282 2-303 65-346 (347)
219 4fl3_A Tyrosine-protein kinase 100.0 2.2E-32 7.6E-37 307.6 17.0 218 427-658 375-629 (635)
220 2z81_A CD282 antigen, TOLL-lik 100.0 9E-32 3.1E-36 300.1 21.7 309 1-319 48-502 (549)
221 1xbb_A Tyrosine-protein kinase 100.0 3.6E-32 1.2E-36 277.6 16.8 224 421-658 16-277 (291)
222 2r3i_A Cell division protein k 100.0 2E-32 6.7E-37 280.7 14.9 239 420-661 2-291 (299)
223 3lm5_A Serine/threonine-protei 100.0 7.4E-33 2.5E-37 287.7 11.7 232 421-663 28-297 (327)
224 3fme_A Dual specificity mitoge 100.0 2.2E-32 7.4E-37 279.0 14.9 229 420-661 6-274 (290)
225 1byg_A CSK, protein (C-termina 100.0 4.2E-32 1.4E-36 275.2 16.6 219 420-659 20-272 (278)
226 3qyz_A Mitogen-activated prote 100.0 1.4E-32 4.8E-37 290.0 13.3 237 421-661 27-321 (364)
227 3brb_A Proto-oncogene tyrosine 100.0 4.7E-32 1.6E-36 279.8 16.8 229 420-661 33-309 (313)
228 3nsz_A CK II alpha, casein kin 100.0 2.5E-32 8.5E-37 284.1 14.8 234 421-662 36-328 (330)
229 2a19_B Interferon-induced, dou 100.0 3E-32 1E-36 276.9 14.9 217 420-661 10-275 (284)
230 3lzb_A Epidermal growth factor 100.0 4.6E-32 1.6E-36 281.5 16.4 224 421-659 15-277 (327)
231 1fvr_A Tyrosine-protein kinase 100.0 3.2E-32 1.1E-36 282.9 15.2 224 421-659 25-299 (327)
232 1csn_A Casein kinase-1; phosph 100.0 4.6E-32 1.6E-36 277.7 16.0 229 421-660 10-283 (298)
233 2i6l_A Mitogen-activated prote 100.0 7.4E-33 2.5E-37 286.5 10.1 242 421-667 11-319 (320)
234 3aln_A Dual specificity mitoge 100.0 6.1E-32 2.1E-36 280.8 16.8 227 421-661 22-293 (327)
235 1o6v_A Internalin A; bacterial 100.0 1.2E-30 4E-35 284.7 27.7 278 2-304 67-345 (466)
236 3byv_A Rhoptry kinase; malaria 100.0 4.9E-33 1.7E-37 294.9 8.6 218 421-660 73-366 (377)
237 2vwi_A Serine/threonine-protei 100.0 4.3E-33 1.5E-37 286.0 7.9 233 420-660 14-294 (303)
238 2wtk_C Serine/threonine-protei 100.0 4.5E-32 1.5E-36 278.9 15.5 230 420-662 4-272 (305)
239 4e7w_A Glycogen synthase kinas 100.0 4.1E-32 1.4E-36 289.2 15.6 232 421-661 40-329 (394)
240 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-32 7.9E-37 289.1 13.6 234 421-662 62-361 (371)
241 3pg1_A Mitogen-activated prote 100.0 1.8E-32 6.2E-37 289.1 12.6 247 413-661 14-324 (362)
242 3an0_A Dual specificity mitoge 100.0 1.3E-32 4.5E-37 287.5 11.4 228 420-661 50-318 (340)
243 2wei_A Calmodulin-domain prote 100.0 2.5E-32 8.7E-37 278.2 13.2 231 420-661 21-284 (287)
244 2fst_X Mitogen-activated prote 100.0 1.4E-32 4.9E-37 289.6 11.5 234 421-660 29-318 (367)
245 1xku_A Decorin; proteoglycan, 100.0 9E-31 3.1E-35 272.3 24.9 269 3-277 52-330 (330)
246 1zy4_A Serine/threonine-protei 100.0 3.1E-32 1.1E-36 279.4 13.5 225 420-659 5-289 (303)
247 3e3p_A Protein kinase, putativ 100.0 5.1E-32 1.8E-36 285.3 15.2 243 414-662 16-323 (360)
248 2v62_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 288.3 10.3 235 421-660 37-328 (345)
249 3op5_A Serine/threonine-protei 100.0 1.5E-32 5.2E-37 289.8 11.0 235 420-660 34-329 (364)
250 2b9h_A MAP kinase FUS3, mitoge 100.0 5.3E-32 1.8E-36 284.4 14.8 237 421-661 11-313 (353)
251 2w1i_A JAK2; chromosomal rearr 100.0 5.1E-32 1.7E-36 281.3 14.1 232 421-660 41-322 (326)
252 2ft3_A Biglycan; proteoglycan, 100.0 8.3E-31 2.8E-35 272.8 23.0 268 3-277 54-331 (332)
253 4exu_A Mitogen-activated prote 100.0 6E-32 2E-36 285.8 14.0 233 421-659 42-329 (371)
254 2buj_A Serine/threonine-protei 100.0 4.4E-32 1.5E-36 280.6 12.4 226 421-659 29-305 (317)
255 2pml_X PFPK7, Ser/Thr protein 100.0 8.5E-33 2.9E-37 289.9 7.0 235 420-662 30-331 (348)
256 1o6v_A Internalin A; bacterial 100.0 1.9E-30 6.6E-35 283.0 25.8 289 1-316 88-377 (466)
257 3rgf_A Cyclin-dependent kinase 100.0 3.6E-32 1.2E-36 291.1 11.9 232 422-661 21-341 (405)
258 2rio_A Serine/threonine-protei 100.0 8.6E-32 3E-36 290.4 14.9 220 424-658 18-300 (434)
259 1u46_A ACK-1, activated CDC42 100.0 8.2E-32 2.8E-36 274.9 13.9 227 421-659 18-283 (291)
260 3kvw_A DYRK2, dual specificity 100.0 2.3E-31 7.9E-36 286.5 17.8 232 421-661 97-416 (429)
261 3eb0_A Putative uncharacterize 100.0 8.5E-32 2.9E-36 286.0 13.4 232 419-660 5-328 (383)
262 2j0j_A Focal adhesion kinase 1 100.0 3E-31 1E-35 299.6 18.4 224 421-659 390-650 (656)
263 3cek_A Dual specificity protei 100.0 2.3E-31 7.9E-36 274.7 16.0 227 421-660 28-299 (313)
264 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2E-31 6.8E-36 281.3 15.5 214 421-657 65-336 (365)
265 3p23_A Serine/threonine-protei 100.0 1.5E-31 5E-36 287.8 14.7 223 421-660 24-290 (432)
266 1wak_A Serine/threonine-protei 100.0 1.4E-31 4.6E-36 285.9 14.2 229 421-658 37-396 (397)
267 3ll6_A Cyclin G-associated kin 100.0 2.4E-31 8.2E-36 277.3 15.6 221 421-660 28-308 (337)
268 3uzp_A CKI-delta, CKID, casein 100.0 3.2E-31 1.1E-35 271.2 16.1 225 421-659 9-279 (296)
269 4hgt_A Casein kinase I isoform 100.0 2.9E-31 9.9E-36 271.4 15.8 230 420-660 8-280 (296)
270 3coi_A Mitogen-activated prote 100.0 2.5E-31 8.6E-36 279.3 15.3 231 421-660 24-312 (353)
271 3fhr_A MAP kinase-activated pr 100.0 3.1E-31 1E-35 276.4 15.8 227 420-661 27-295 (336)
272 2jii_A Serine/threonine-protei 100.0 3.6E-32 1.2E-36 285.6 8.4 228 421-661 42-337 (352)
273 1j1b_A Glycogen synthase kinas 100.0 4E-31 1.4E-35 283.9 16.2 230 421-660 54-343 (420)
274 3bz5_A Internalin-J, INLJ; leu 100.0 9.3E-30 3.2E-34 275.8 27.1 276 2-304 41-332 (457)
275 1blx_A Cyclin-dependent kinase 100.0 2.8E-31 9.7E-36 275.6 12.8 238 419-660 9-303 (326)
276 2dyl_A Dual specificity mitoge 100.0 9.3E-31 3.2E-35 270.6 16.6 229 420-660 24-290 (318)
277 1z57_A Dual specificity protei 100.0 7.9E-31 2.7E-35 273.5 16.2 226 421-660 14-335 (339)
278 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.7E-32 3.3E-36 278.2 9.1 224 420-659 32-301 (319)
279 2vx3_A Dual specificity tyrosi 100.0 1.1E-30 3.7E-35 277.4 16.3 165 420-593 53-260 (382)
280 3bz5_A Internalin-J, INLJ; leu 100.0 2.5E-29 8.4E-34 272.4 27.0 276 1-304 62-353 (457)
281 3qa8_A MGC80376 protein; kinas 100.0 3.1E-31 1E-35 294.2 12.0 236 420-659 13-303 (676)
282 2iwi_A Serine/threonine-protei 100.0 3.4E-31 1.2E-35 273.2 10.9 221 420-660 30-290 (312)
283 3a99_A Proto-oncogene serine/t 100.0 1.5E-31 5.1E-36 276.9 7.8 221 421-661 43-301 (320)
284 3o6n_A APL1; leucine-rich repe 100.0 2.3E-29 7.7E-34 268.1 23.8 280 25-319 43-323 (390)
285 3oja_B Anopheles plasmodium-re 100.0 1.7E-29 5.8E-34 284.0 24.0 280 25-319 49-329 (597)
286 4g8a_A TOLL-like receptor 4; l 100.0 9.1E-29 3.1E-33 280.5 29.5 310 7-319 35-547 (635)
287 1q8y_A SR protein kinase; tran 100.0 7.5E-31 2.6E-35 277.8 11.5 231 421-660 19-340 (373)
288 3sv0_A Casein kinase I-like; t 100.0 3.6E-30 1.2E-34 279.7 17.0 227 421-658 7-276 (483)
289 2eu9_A Dual specificity protei 100.0 4.4E-30 1.5E-34 269.7 15.9 233 421-662 19-342 (355)
290 3uqc_A Probable conserved tran 100.0 5.9E-30 2E-34 260.2 15.3 212 421-660 31-265 (286)
291 3m2w_A MAP kinase-activated pr 100.0 1.1E-29 3.7E-34 260.3 15.2 213 420-661 16-264 (299)
292 2pzi_A Probable serine/threoni 100.0 9.2E-30 3.2E-34 290.2 14.8 211 421-657 80-324 (681)
293 1jl5_A Outer protein YOPM; leu 100.0 3.6E-28 1.2E-32 263.1 26.1 271 3-313 91-382 (454)
294 2z66_A Variable lymphocyte rec 100.0 1.3E-28 4.6E-33 253.1 21.0 248 6-257 10-263 (306)
295 4fcg_A Uncharacterized protein 100.0 3.1E-28 1E-32 252.5 20.1 234 3-256 81-315 (328)
296 2z80_A TOLL-like receptor 2, v 100.0 1E-28 3.6E-33 259.3 16.3 278 26-307 30-318 (353)
297 4fcg_A Uncharacterized protein 100.0 3.4E-28 1.2E-32 252.1 19.3 223 75-302 82-313 (328)
298 2z80_A TOLL-like receptor 2, v 100.0 1.5E-28 5E-33 258.1 15.6 277 4-283 32-318 (353)
299 2z66_A Variable lymphocyte rec 100.0 2.9E-28 1E-32 250.5 16.8 261 3-264 28-296 (306)
300 3zyi_A Leucine-rich repeat-con 100.0 3.8E-27 1.3E-31 255.9 24.9 245 29-278 56-302 (452)
301 1jl5_A Outer protein YOPM; leu 100.0 8E-28 2.7E-32 260.3 18.7 269 2-304 10-291 (454)
302 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-27 5.2E-32 242.5 19.2 225 6-256 14-239 (285)
303 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-27 4.9E-32 242.7 18.4 205 3-231 32-238 (285)
304 3zyi_A Leucine-rich repeat-con 100.0 5.5E-27 1.9E-31 254.6 23.5 248 52-303 55-303 (452)
305 3zyj_A Leucine-rich repeat-con 99.9 8.1E-27 2.8E-31 252.4 24.5 245 29-278 45-291 (440)
306 3zyj_A Leucine-rich repeat-con 99.9 1.3E-26 4.4E-31 250.8 24.4 247 52-302 44-291 (440)
307 1wwl_A Monocyte differentiatio 99.9 6.5E-29 2.2E-33 256.0 6.0 249 47-304 39-310 (312)
308 3o53_A Protein LRIM1, AGAP0063 99.9 7.1E-29 2.4E-33 256.3 6.0 256 5-274 12-270 (317)
309 1z7x_W Ribonuclease inhibitor; 99.9 1.3E-29 4.4E-34 276.2 -0.9 303 2-304 27-384 (461)
310 1wwl_A Monocyte differentiatio 99.9 1.7E-28 5.7E-33 253.0 6.6 248 23-280 39-310 (312)
311 2vuw_A Serine/threonine-protei 99.9 7.3E-28 2.5E-32 251.0 9.9 222 421-657 20-335 (336)
312 1z7x_W Ribonuclease inhibitor; 99.9 2E-29 6.7E-34 274.8 -2.7 307 2-308 2-359 (461)
313 3dzo_A Rhoptry kinase domain; 99.9 5.2E-28 1.8E-32 259.0 8.4 217 421-659 78-369 (413)
314 3o53_A Protein LRIM1, AGAP0063 99.9 5.5E-28 1.9E-32 249.6 8.0 242 2-256 33-277 (317)
315 3g06_A SSPH2 (leucine-rich rep 99.9 1.1E-25 3.7E-30 251.1 26.9 267 4-313 41-307 (622)
316 3oja_A Leucine-rich immune mol 99.9 1.7E-27 6E-32 260.2 11.9 234 27-274 34-270 (487)
317 3oja_A Leucine-rich immune mol 99.9 4.2E-27 1.4E-31 257.2 10.2 236 49-298 32-270 (487)
318 3g06_A SSPH2 (leucine-rich rep 99.9 6.8E-24 2.3E-28 236.6 25.7 248 3-290 61-308 (622)
319 2z62_A TOLL-like receptor 4, v 99.9 3.9E-24 1.3E-28 216.2 18.7 206 99-305 29-239 (276)
320 2z62_A TOLL-like receptor 4, v 99.9 6.4E-24 2.2E-28 214.6 19.0 223 7-233 11-239 (276)
321 2o6q_A Variable lymphocyte rec 99.9 2.8E-23 9.6E-28 209.1 21.4 201 100-303 18-218 (270)
322 3rfs_A Internalin B, repeat mo 99.9 7.1E-24 2.4E-28 213.7 16.1 208 97-315 40-247 (272)
323 3rfs_A Internalin B, repeat mo 99.9 7.3E-24 2.5E-28 213.6 15.0 210 24-267 38-247 (272)
324 2o6q_A Variable lymphocyte rec 99.9 7.7E-23 2.6E-27 205.9 22.0 156 99-254 62-217 (270)
325 1p9a_G Platelet glycoprotein I 99.9 1.1E-22 3.6E-27 206.9 21.0 202 95-303 7-208 (290)
326 3goz_A Leucine-rich repeat-con 99.9 3.7E-25 1.3E-29 232.9 1.5 253 7-259 2-301 (362)
327 1p9a_G Platelet glycoprotein I 99.9 1.4E-22 4.8E-27 206.0 20.4 202 24-255 7-208 (290)
328 2ca6_A RAN GTPase-activating p 99.9 1.1E-24 3.8E-29 231.4 3.8 188 119-306 91-319 (386)
329 2ast_B S-phase kinase-associat 99.9 3.2E-24 1.1E-28 223.3 5.8 253 29-311 49-314 (336)
330 4azs_A Methyltransferase WBDD; 99.9 5.2E-25 1.8E-29 244.0 -1.0 162 429-590 242-437 (569)
331 2ca6_A RAN GTPase-activating p 99.9 2E-24 6.7E-29 229.5 1.7 249 19-283 24-320 (386)
332 2ast_B S-phase kinase-associat 99.9 4.6E-24 1.6E-28 222.2 3.4 253 4-288 48-315 (336)
333 4glp_A Monocyte differentiatio 99.9 7.3E-23 2.5E-27 210.5 12.4 225 74-304 64-308 (310)
334 4glp_A Monocyte differentiatio 99.9 9.4E-23 3.2E-27 209.7 11.6 223 52-280 65-308 (310)
335 3m19_A Variable lymphocyte rec 99.9 8.3E-22 2.8E-26 196.1 17.7 157 123-279 36-192 (251)
336 3goz_A Leucine-rich repeat-con 99.9 7.4E-24 2.5E-28 222.9 1.9 255 31-305 2-299 (362)
337 2xwt_C Thyrotropin receptor; s 99.9 8.9E-22 3.1E-26 194.3 16.2 205 15-229 23-237 (239)
338 2xwt_C Thyrotropin receptor; s 99.9 6.1E-22 2.1E-26 195.5 14.9 177 118-300 51-236 (239)
339 3ogk_B Coronatine-insensitive 99.9 3.8E-24 1.3E-28 240.6 -2.1 303 2-305 163-528 (592)
340 3m19_A Variable lymphocyte rec 99.9 3.9E-21 1.3E-25 191.2 18.1 180 123-305 15-194 (251)
341 1h6u_A Internalin H; cell adhe 99.9 5.9E-21 2E-25 195.9 15.9 205 10-232 26-231 (308)
342 4ay9_X Follicle-stimulating ho 99.8 9.4E-21 3.2E-25 198.2 17.5 238 6-251 12-255 (350)
343 1h6u_A Internalin H; cell adhe 99.8 1.8E-20 6E-25 192.3 18.9 172 118-303 59-230 (308)
344 3ogk_B Coronatine-insensitive 99.8 2.2E-23 7.4E-28 234.5 -6.4 111 193-303 377-501 (592)
345 4ay9_X Follicle-stimulating ho 99.8 1.8E-20 6.2E-25 196.0 15.5 239 30-299 12-255 (350)
346 2o6s_A Variable lymphocyte rec 99.8 4.3E-20 1.5E-24 178.1 16.2 162 122-290 28-189 (208)
347 3cvr_A Invasion plasmid antige 99.8 4.9E-20 1.7E-24 203.0 15.6 187 52-265 60-253 (571)
348 3cvr_A Invasion plasmid antige 99.8 4.2E-20 1.4E-24 203.5 14.9 188 28-242 60-254 (571)
349 2o6s_A Variable lymphocyte rec 99.8 1.4E-19 4.9E-24 174.4 16.5 140 119-265 49-188 (208)
350 3en9_A Glycoprotease, O-sialog 99.8 8.2E-21 2.8E-25 209.2 6.8 164 425-591 340-538 (540)
351 2p1m_B Transport inhibitor res 99.8 2.9E-21 1E-25 217.1 -3.5 299 2-303 104-469 (594)
352 2p1m_B Transport inhibitor res 99.8 1.1E-20 3.7E-25 212.5 0.4 299 2-302 129-493 (594)
353 1h6t_A Internalin B; cell adhe 99.8 1.8E-18 6.2E-23 175.7 15.9 169 121-303 45-213 (291)
354 1m9s_A Internalin B; cell inva 99.8 9.5E-19 3.2E-23 194.9 14.1 129 94-232 83-211 (605)
355 1m9s_A Internalin B; cell inva 99.8 2E-18 6.8E-23 192.3 16.6 189 76-280 23-211 (605)
356 2xot_A Amphoterin-induced prot 99.8 1.5E-18 5.3E-23 182.1 14.9 156 123-278 40-201 (361)
357 2xot_A Amphoterin-induced prot 99.8 1.6E-18 5.4E-23 182.0 14.6 176 125-303 21-202 (361)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 3.3E-18 1.1E-22 166.2 15.7 153 102-257 15-168 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 3.3E-18 1.1E-22 166.3 15.2 134 122-255 32-165 (220)
360 2v9t_B SLIT homolog 2 protein 99.8 3.6E-18 1.2E-22 166.0 15.2 132 171-302 33-164 (220)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-18 1.2E-22 166.2 14.6 132 172-303 34-166 (220)
362 1dce_A Protein (RAB geranylger 99.8 6.1E-21 2.1E-25 211.3 -5.5 217 24-273 346-567 (567)
363 1dce_A Protein (RAB geranylger 99.8 4.3E-21 1.5E-25 212.5 -7.6 202 2-249 348-567 (567)
364 1h6t_A Internalin B; cell adhe 99.8 2.3E-18 8E-23 174.9 13.0 185 9-209 30-215 (291)
365 3e6j_A Variable lymphocyte rec 99.7 1.7E-17 5.9E-22 162.2 16.5 134 122-256 40-173 (229)
366 3e6j_A Variable lymphocyte rec 99.7 2.3E-17 7.7E-22 161.4 16.8 150 125-278 22-171 (229)
367 4b8c_D Glucose-repressible alc 99.7 1.3E-18 4.3E-23 198.8 4.4 141 115-259 217-358 (727)
368 4ezg_A Putative uncharacterize 99.7 1.9E-17 6.6E-22 157.9 11.8 150 146-303 44-194 (197)
369 4ezg_A Putative uncharacterize 99.7 1.9E-17 6.5E-22 158.0 11.3 151 121-278 43-193 (197)
370 1xeu_A Internalin C; cellular 99.7 3.5E-18 1.2E-22 170.9 6.4 166 5-209 21-187 (263)
371 4b8c_D Glucose-repressible alc 99.7 2.8E-18 9.7E-23 195.8 4.9 196 27-252 173-369 (727)
372 1xeu_A Internalin C; cellular 99.7 2.1E-17 7.3E-22 165.1 8.9 169 121-304 18-186 (263)
373 3sb4_A Hypothetical leucine ri 99.7 4.1E-16 1.4E-20 161.4 13.8 259 2-272 48-327 (329)
374 3sb4_A Hypothetical leucine ri 99.7 8.3E-17 2.8E-21 166.7 7.6 259 26-296 24-327 (329)
375 1zar_A RIO2 kinase; serine kin 99.6 1E-16 3.6E-21 161.6 6.7 121 420-546 89-241 (282)
376 1w8a_A SLIT protein; signaling 99.6 9.5E-16 3.3E-20 145.4 12.7 130 125-257 11-141 (192)
377 1w8a_A SLIT protein; signaling 99.6 1.3E-15 4.4E-20 144.5 12.6 131 149-282 11-142 (192)
378 2ell_A Acidic leucine-rich nuc 99.6 9.8E-16 3.3E-20 142.0 11.5 131 170-302 24-159 (168)
379 2ell_A Acidic leucine-rich nuc 99.6 7E-16 2.4E-20 143.0 9.8 128 148-277 26-158 (168)
380 2je0_A Acidic leucine-rich nuc 99.6 6.6E-16 2.3E-20 140.1 8.7 126 147-274 18-148 (149)
381 2je0_A Acidic leucine-rich nuc 99.6 1.5E-15 5E-20 137.7 9.6 129 169-299 16-149 (149)
382 4fdw_A Leucine rich hypothetic 99.6 7.6E-14 2.6E-18 147.7 22.4 264 26-301 112-381 (401)
383 4fdw_A Leucine rich hypothetic 99.6 5.3E-14 1.8E-18 148.9 21.1 262 3-277 113-381 (401)
384 2wfh_A SLIT homolog 2 protein 99.6 1.2E-14 4.2E-19 137.7 13.3 105 171-276 32-136 (193)
385 2o6r_A Variable lymphocyte rec 99.6 1.9E-14 6.4E-19 134.6 14.0 131 125-258 10-140 (177)
386 2wfh_A SLIT homolog 2 protein 99.6 1.6E-14 5.5E-19 136.9 12.4 128 125-256 13-140 (193)
387 2o6r_A Variable lymphocyte rec 99.6 3.1E-14 1.1E-18 133.1 13.7 128 149-279 10-137 (177)
388 1ds9_A Outer arm dynein; leuci 99.5 1.9E-16 6.4E-21 151.2 -5.2 131 165-302 43-184 (198)
389 1a9n_A U2A', U2A'; complex (nu 99.5 2.7E-14 9.3E-19 133.3 8.5 131 118-277 15-151 (176)
390 1a9n_A U2A', U2A'; complex (nu 99.5 7.4E-14 2.5E-18 130.3 10.0 132 166-303 15-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 4.5E-16 1.5E-20 148.5 -6.1 147 121-272 17-180 (198)
392 3g39_A Variable lymphocyte rec 99.4 1.9E-12 6.3E-17 120.0 12.4 106 149-257 12-117 (170)
393 2r9u_A Variable lymphocyte rec 99.4 2.8E-12 9.5E-17 119.2 12.3 105 149-256 15-119 (174)
394 3g39_A Variable lymphocyte rec 99.4 2.4E-12 8.2E-17 119.2 11.0 105 172-279 11-115 (170)
395 1zth_A RIO1 serine protein kin 99.4 1.5E-12 5.1E-17 129.4 9.7 119 423-547 49-219 (258)
396 2r9u_A Variable lymphocyte rec 99.3 3.6E-12 1.2E-16 118.4 10.9 103 173-278 15-117 (174)
397 4fs7_A Uncharacterized protein 99.3 1.2E-10 4.2E-15 123.3 21.4 283 3-297 71-373 (394)
398 3un9_A NLR family member X1; l 99.2 3.9E-13 1.3E-17 140.8 -2.0 159 122-280 72-253 (372)
399 3un9_A NLR family member X1; l 99.2 4.6E-13 1.6E-17 140.3 -3.4 112 120-231 153-283 (372)
400 4fs7_A Uncharacterized protein 99.2 6.8E-10 2.3E-14 117.5 19.3 279 1-295 92-393 (394)
401 2ifg_A High affinity nerve gro 99.2 7.6E-11 2.6E-15 122.6 11.0 103 151-256 13-117 (347)
402 2ifg_A High affinity nerve gro 99.1 1.3E-10 4.3E-15 121.0 9.7 103 174-279 12-116 (347)
403 4gt6_A Cell surface protein; l 99.1 6.9E-09 2.4E-13 109.8 22.3 285 5-300 66-367 (394)
404 4gyi_A RIO2 kinase; protein ki 99.0 2.9E-11 9.9E-16 125.1 -0.7 122 423-546 97-264 (397)
405 4gt6_A Cell surface protein; l 99.0 2.7E-08 9.3E-13 105.1 21.9 276 15-300 51-344 (394)
406 2ra8_A Uncharacterized protein 98.9 6.7E-10 2.3E-14 115.3 5.9 82 118-202 135-227 (362)
407 4h09_A Hypothetical leucine ri 98.9 2.1E-07 7.1E-12 97.7 23.3 285 4-300 47-343 (379)
408 2ra8_A Uncharacterized protein 98.8 3.4E-09 1.2E-13 109.9 6.1 163 140-305 133-322 (362)
409 4h09_A Hypothetical leucine ri 98.7 9.5E-07 3.2E-11 92.7 22.4 277 1-289 67-355 (379)
410 3rw6_A Nuclear RNA export fact 98.4 5.4E-08 1.9E-12 95.7 0.4 79 216-296 168-257 (267)
411 1nd4_A Aminoglycoside 3'-phosp 98.3 5.7E-07 2E-11 88.8 7.4 81 422-509 21-103 (264)
412 3tm0_A Aminoglycoside 3'-phosp 98.3 1.3E-06 4.6E-11 86.4 9.8 90 416-510 9-99 (263)
413 1io0_A Tropomodulin; LRR prote 98.2 3.8E-07 1.3E-11 85.2 2.5 65 238-302 89-163 (185)
414 3rw6_A Nuclear RNA export fact 98.2 1.8E-07 6.2E-12 91.9 0.4 78 169-248 169-257 (267)
415 1io0_A Tropomodulin; LRR prote 98.2 6E-07 2E-11 83.8 2.4 41 190-230 117-163 (185)
416 3dxp_A Putative acyl-COA dehyd 97.7 6.3E-05 2.2E-09 78.0 8.9 79 426-508 43-128 (359)
417 3sg8_A APH(2'')-ID; antibiotic 97.6 4.9E-05 1.7E-09 76.8 5.8 74 426-509 25-104 (304)
418 3r70_A Aminoglycoside phosphot 97.5 0.00028 9.6E-09 71.8 10.3 74 422-509 38-115 (320)
419 3e4g_A ATP synthase subunit S, 97.5 4.8E-05 1.7E-09 69.2 3.7 64 117-180 80-149 (176)
420 3e4g_A ATP synthase subunit S, 97.5 7.4E-05 2.5E-09 68.0 4.7 83 219-301 62-150 (176)
421 4gkh_A Aminoglycoside 3'-phosp 97.1 0.0027 9.2E-08 62.6 11.4 76 428-510 31-109 (272)
422 3d1u_A Putative fructosamine-3 96.9 0.0033 1.1E-07 62.6 9.6 76 425-508 19-97 (288)
423 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00071 2.4E-08 62.7 3.5 38 27-64 41-83 (197)
424 3rfe_A Platelet glycoprotein I 96.5 0.0038 1.3E-07 53.9 6.4 57 6-64 11-68 (130)
425 1pgv_A TMD-1, tropomodulin TMD 96.2 0.002 6.7E-08 59.7 2.9 86 217-302 69-169 (197)
426 3tdw_A Gentamicin resistance p 95.9 0.043 1.5E-06 55.0 11.2 74 427-510 25-102 (306)
427 3ovc_A Hygromycin-B 4-O-kinase 95.7 0.054 1.8E-06 55.7 11.4 74 425-508 45-121 (362)
428 3rfe_A Platelet glycoprotein I 95.3 0.015 5.3E-07 50.0 4.4 37 4-40 32-68 (130)
429 3jr1_A Putative fructosamine-3 92.7 0.28 9.4E-06 49.1 8.3 75 426-508 41-118 (312)
430 3f7w_A Putative fructosamine-3 92.6 0.23 7.8E-06 49.0 7.6 78 423-508 17-97 (288)
431 2q83_A YTAA protein; 2635576, 92.0 0.44 1.5E-05 48.0 9.1 72 428-508 39-118 (346)
432 2pyw_A Uncharacterized protein 91.6 0.48 1.7E-05 49.6 9.0 77 426-505 39-122 (420)
433 2olc_A MTR kinase, methylthior 89.8 0.3 1E-05 50.7 5.4 79 426-506 35-120 (397)
434 2ppq_A HSK, HK, homoserine kin 88.1 3.3 0.00011 41.1 11.6 91 410-507 6-109 (322)
435 3feg_A Choline/ethanolamine ki 87.3 0.57 1.9E-05 48.2 5.3 73 427-508 56-137 (379)
436 3dxq_A Choline/ethanolamine ki 85.1 0.91 3.1E-05 44.9 5.4 72 425-508 22-95 (301)
437 3cxl_A N-chimerin; SH2, RHO-GA 81.1 0.16 5.3E-06 54.1 -2.3 57 434-492 152-215 (463)
438 3csv_A Aminoglycoside phosphot 79.9 2.1 7.2E-05 42.9 5.8 26 522-547 189-218 (333)
439 3ats_A Putative uncharacterize 77.0 2.4 8.2E-05 42.9 5.3 81 427-508 26-120 (357)
440 3i1a_A Spectinomycin phosphotr 71.0 4.8 0.00016 40.5 5.7 26 522-547 212-237 (339)
441 2yle_A Protein spire homolog 1 69.1 8 0.00027 35.9 6.1 53 525-590 78-135 (229)
442 1zyl_A Hypothetical protein YI 66.8 9.2 0.00031 37.9 6.8 91 411-507 11-113 (328)
443 3f2s_A CK, chetk-alpha, cholin 64.5 7 0.00024 40.3 5.3 78 427-508 58-158 (401)
444 1nw1_A Choline kinase (49.2 KD 46.7 27 0.00092 36.2 6.3 71 427-507 79-158 (429)
445 2lz0_A Uncharacterized protein 42.1 30 0.001 27.5 4.5 49 12-61 5-53 (100)
446 2qg7_A Ethanolamine kinase PV0 41.5 41 0.0014 35.2 6.8 73 427-508 114-188 (458)
447 3c5i_A Choline kinase; choline 31.9 44 0.0015 33.5 5.1 72 427-507 39-120 (369)
448 3mes_A Choline kinase; malaria 27.6 1E+02 0.0035 31.7 6.9 73 427-508 76-157 (424)
449 2lz0_A Uncharacterized protein 26.9 1E+02 0.0036 24.2 5.4 14 165-178 38-51 (100)
450 4ann_A ESSB; membrane protein, 22.3 77 0.0026 29.2 4.2 98 477-592 41-158 (215)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-46 Score=379.37 Aligned_cols=232 Identities=22% Similarity=0.357 Sum_probs=171.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
+++...+.||+|+||+||+|++.+ .||||+++.... .....+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 467778899999999999998754 489998864332 23445789999999999999999999998865 5689999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC--CC
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--SN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--~~ 553 (667)
|||++|+|.++|.... ...|.||||+|||||+++.+||+|||+|+...... ..
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 9999999999885432 11245999999999999999999999998765332 22
Q ss_pred cccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.+..+||+.||||| |+.|+|||||||++|||+||+.||...... .............|.++...+..
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~- 266 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQIIFMVGRGYASPDLSKLYKNC- 266 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHTTCCCCCSTTSCTTS-
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHHHHHHhcCCCCCCcccccccc-
Confidence 45578999999999 566899999999999999999998643211 11111111122233322222222
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
...+.+++.+||+.||++||||+||+++|+.....+.
T Consensus 267 --~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 267 --PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp --CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred --hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 2356778889999999999999999999887655443
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.6e-46 Score=378.01 Aligned_cols=223 Identities=22% Similarity=0.356 Sum_probs=171.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
+++...+.||+|+||+||+|++. +++.||||++..... ....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~---~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC---C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC---hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 34566778999999999999863 457899999875432 223567999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeecCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLDLEH 534 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld~~~ 534 (667)
..++|||||++|+|.++|.... ...|.||||+|||||+++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCC
Confidence 9999999999999999985321 011349999999999999
Q ss_pred ceEEecccccccccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
++||+|||+|+...... ...+..+||+.||||| |+.++|||||||++|||+| |+.||..... ..+..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~ 258 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVE 258 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence 99999999998764332 2234568999999999 7889999999999999999 8999864321 11111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
. +.....++.++.. ...+.+++.+||+.||++||||+||+++|..
T Consensus 259 ~----i~~~~~~~~p~~~---~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 259 M----IRNRQVLPCPDDC---PAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp H----HHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred H----HHcCCCCCCcccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1 1111111111121 2346788899999999999999999999864
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=380.05 Aligned_cols=225 Identities=24% Similarity=0.472 Sum_probs=168.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||+||+|+++ ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 46777889999999999999864 3678999998753 2334578999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc---------------------------------------CCcccccccCCeeecCCCc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA---------------------------------------AAEELDISSKNVLLDLEHK 535 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~---------------------------------------~~~~~dlk~~NiLld~~~~ 535 (667)
..++|||||++|+|.+++.... ...|.||||+|||||+++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc
Confidence 9999999999999999875421 0123499999999999999
Q ss_pred eEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhh
Q 042735 536 AHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~ 606 (667)
+||+|||+|+....... ..+..+||+.||||| |+.++|||||||++|||+| |+.||..... ......
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~----~~~~~~ 272 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN----TEAIDC 272 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH----HHHHHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH----HHHHHH
Confidence 99999999997654322 224568999999999 7889999999999999999 8999864321 111111
Q ss_pred hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+.....+..|...+ .++.+++.+||+.||++||||+||+++|.....
T Consensus 273 -i~~g~~~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 273 -ITQGRELERPRACP------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp -HHHTCCCCCCTTCC------HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HHcCCCCCCccccc------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 11111222222222 246788889999999999999999999877543
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.5e-46 Score=384.46 Aligned_cols=228 Identities=21% Similarity=0.346 Sum_probs=173.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|+..+.||+|+||+||+|+. .+++.||||++...... ....+.|.+|+++|++++|||||++++++.+++..|+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 36899999999999999999986 56889999998754332 2345689999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|||||+||+|.+++..... ..|+||||+|||++.++.+||+|||+|+.......
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999998853211 12349999999999999999999999997654333
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
..++.+||+.||||| |+.++||||+||++|||+||+.||..... ..... .+.....++.....
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~----~~~~~----~i~~~~~~~~~~~~--- 249 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM----KNLVL----KIISGSFPPVSLHY--- 249 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHH----HHHHTCCCCCCTTS---
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHHH----HHHcCCCCCCCccC---
Confidence 345678999999999 78899999999999999999999864321 11111 11111222211111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..++.+++.+||+.||++|||++|++++.|+...
T Consensus 250 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 1246678889999999999999999999988643
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-46 Score=383.21 Aligned_cols=227 Identities=23% Similarity=0.375 Sum_probs=179.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4588888999999999999986 4688999999864322 1234588999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||||++|+|.+.+..... ..|.||||+|||++.+|.+||+|||+|+.........++
T Consensus 150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 999999999988764322 124599999999999999999999999987665555667
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+||+.||||| |+.++||||+||++|||+||+.||..... ..... .+.....+.++. ......++
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~----~~~~~-~i~~~~~~~~~~----~~~~s~~~ 300 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP----LKAMK-MIRDNLPPRLKN----LHKVSPSL 300 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH-HHHHSSCCCCSC----GGGSCHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHHH-HHHcCCCCCCCc----cccCCHHH
Confidence 89999999999 78999999999999999999999863221 11111 111111222211 11222356
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+++.+||+.||++|||++|+++|.||...
T Consensus 301 ~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 301 KGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 788889999999999999999999999754
No 6
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-45 Score=375.61 Aligned_cols=223 Identities=26% Similarity=0.445 Sum_probs=171.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|+++|++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 46778889999999999999864 3678999998653 2234578999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc-------------------------------------CCcccccccCCeeecCCCceE
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-------------------------------------AAEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-------------------------------------~~~~~dlk~~NiLld~~~~~k 537 (667)
..++|||||++|+|.++|.... ...|.||||+|||+|+++.+|
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999999885421 012349999999999999999
Q ss_pred EecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhh
Q 042735 538 VSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 538 l~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 608 (667)
|+|||+|+........ ....+||+.||||| |+.|+|||||||++|||+| |+.||..... ..+....
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~----~~~~~~i- 243 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----NEVIECI- 243 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHHHHH-
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH-
Confidence 9999999976543322 22357999999999 7889999999999999999 8999864321 1111111
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.....+..|...+ .++.+++.+||+.||++||||+||.+.|...
T Consensus 244 ~~~~~~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 244 TQGRVLQRPRTCP------QEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHTCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HcCCCCCCCccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111112222222 2467888899999999999999999888754
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9.7e-45 Score=365.88 Aligned_cols=223 Identities=21% Similarity=0.354 Sum_probs=168.4
Q ss_pred cCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCceEE
Q 042735 424 DAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH----ARHSIL 498 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~----~~~~~l 498 (667)
...+.||+|+||+||+|... ++..||||++...... ....+.|.+|++++++++|||||+++|+|.+ .+..|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 44567999999999999864 5788999998653222 2345679999999999999999999999875 345899
Q ss_pred EEEecCCCChHHHhcccc------------------------C--CcccccccCCeeec-CCCceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------A--AEELDISSKNVLLD-LEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~--~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~~~ 551 (667)
|||||++|+|.+++.... . ..|+||||+|||++ .++.+||+|||+|+....
T Consensus 107 vmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-- 184 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-- 184 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT--
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC--
Confidence 999999999988764311 1 34679999999998 479999999999986432
Q ss_pred CCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 552 SNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
...++.+||+.||||| |+.++|||||||++|||+||+.||..... ...... .+.....+...+ ...
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~---~i~~~~~~~~~~--~~~ 255 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYR---RVTSGVKPASFD--KVA 255 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHH---HHTTTCCCGGGG--GCC
T ss_pred CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHH---HHHcCCCCCCCC--ccC
Confidence 3345679999999999 78999999999999999999999853221 111111 111111111110 011
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..++.+++.+||+.||++|||++|+++|.|+..
T Consensus 256 ~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 256 IPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 224677888999999999999999999999854
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=381.36 Aligned_cols=227 Identities=23% Similarity=0.375 Sum_probs=180.0
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
..|+..+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 4688889999999999999986 46889999998653221 234588999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
||||+||+|.+.+..... ..|+||||+||||+.+|.+||+|||+|+.........++
T Consensus 227 mEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 227 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp EECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred EeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 999999999988754322 224599999999999999999999999987665555667
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+||+.||||| |+.++|||||||++|||+||+.||...... .... .+.....+.+.... .....+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~-~i~~~~~~~~~~~~----~~s~~~ 377 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMK-MIRDNLPPRLKNLH----KVSPSL 377 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHHHSCCCCCSCTT----SSCHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHH-HHHcCCCCCCcccc----cCCHHH
Confidence 89999999999 789999999999999999999998632211 1111 11111222222111 112246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+++.+||+.||++|||++|+++|.|+...
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 678889999999999999999999998754
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.4e-45 Score=370.06 Aligned_cols=231 Identities=19% Similarity=0.278 Sum_probs=180.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||+||+|+. .+++.||||++.+.... .....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 5799999999999999999986 56889999998642110 112245789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC--CC
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--SN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--~~ 553 (667)
||||+||+|.+.+..... ..|+||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 999999999988864321 1245999999999999999999999999875432 23
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
..+.+||+.||||| |+.++||||+||++|||+||+.||...+. .......... ...+|...+
T Consensus 191 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~----~~~~~~i~~~--~~~~p~~~s------ 258 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----GLIFAKIIKL--EYDFPEKFF------ 258 (311)
T ss_dssp BCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHT--CCCCCTTCC------
T ss_pred ccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcC--CCCCCcccC------
Confidence 45689999999999 78899999999999999999999864321 1111111111 222332222
Q ss_pred HHHHHHHHhccccCCCCCCCHHH------HHHHHHHhhhhhcc
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQT------ITQQLLFSLVYFSY 664 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~e------v~~~l~~~~~~~~~ 664 (667)
.++.+++.+||+.||++|||++| |++|.||..+.|+.
T Consensus 259 ~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~ 301 (311)
T 4aw0_A 259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301 (311)
T ss_dssp HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence 24567888999999999999987 57888998877653
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.4e-44 Score=356.69 Aligned_cols=229 Identities=22% Similarity=0.299 Sum_probs=162.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|+..+.||+|+||+||+|+. .+++.||||++.+..... ....+.+.+|++++++++|||||++++++.+.+..|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47899999999999999999986 568899999986543221 2234679999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||| +|+|.+.+.... ...|+||||+|||++.++++||+|||+|+...... ..
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-~~ 168 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FL 168 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-cc
Confidence 99999 689988775432 12245999999999999999999999998765432 34
Q ss_pred ccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
++.+||+.||||| | +.++||||+||++|||+||+.||..... .......... .+.++...+
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~----~~~~~~i~~~--~~~~p~~~s------ 236 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI----PVLFKNISNG--VYTLPKFLS------ 236 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHT--CCCCCTTSC------
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHcC--CCCCCCCCC------
Confidence 5679999999999 4 4689999999999999999999863221 1111111111 122222221
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.++.+++.+||+.||++|||++|++++.|+.....+
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p~ 272 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPE 272 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCCG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcCcccccCCCh
Confidence 245678889999999999999999999999765433
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.2e-45 Score=368.18 Aligned_cols=229 Identities=23% Similarity=0.342 Sum_probs=172.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||+||+|+.. .++.||||++....... .....+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 57999999999999999999753 36789999986532211 1223588999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+|||||+||+|.+.+.... ...|+||||+|||++.++.+||+|||+|+.......
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 99999999999998875432 122459999999999999999999999997655444
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
...+.+||+.||||| |+.++||||+||++|||+||+.||...+. .......... .+..|...+
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~----~~~~~~i~~~--~~~~p~~~s----- 250 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR----KETMTMILKA--KLGMPQFLS----- 250 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC-----
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH----HHHHHHHHcC--CCCCCCcCC-----
Confidence 556789999999999 78999999999999999999999864321 1111111111 122222222
Q ss_pred HHHHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
.++.+++.+||+.||++||| ++|+++|.||..+.|+
T Consensus 251 -~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~ 291 (304)
T 3ubd_A 251 -PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWN 291 (304)
T ss_dssp -HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred -HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHH
Confidence 24567888999999999998 5899999999987765
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-43 Score=367.46 Aligned_cols=228 Identities=25% Similarity=0.395 Sum_probs=174.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-CCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-RNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~g~~~~ 492 (667)
.++|+..+.||+|+||+||+|.+.. ++.||||++..... ....+.|.+|+++|++++| ||||+++|+|.+
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3678889999999999999998643 35799999875432 2345679999999999975 999999999976
Q ss_pred C-CceEEEEEecCCCChHHHhcccc----------------------------------------CCcccccccCCeeec
Q 042735 493 A-RHSILIYEYLKRGSLATNLSNDA----------------------------------------AAEELDISSKNVLLD 531 (667)
Q Consensus 493 ~-~~~~lv~ey~~~g~L~~~l~~~~----------------------------------------~~~~~dlk~~NiLld 531 (667)
. +..++|||||++|+|.++|.... ...|.||||+|||++
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 219 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC
Confidence 5 56899999999999999885321 012449999999999
Q ss_pred CCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
+++.+||+|||+|+....+... .+..+||+.||||| |+.++|||||||++|||+| |+.||..... ..
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~----~~ 295 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DE 295 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----HH
Confidence 9999999999999976544332 34568999999999 7899999999999999998 8999864321 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.....+..|...+ .++.+++.+||+.||++||||+||+++|.....
T Consensus 296 ~~~~~i~~g~~~~~p~~~~------~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 296 EFCRRLKEGTRMRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHHTCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCC------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1111122222222332222 246778889999999999999999999876543
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-43 Score=362.16 Aligned_cols=231 Identities=26% Similarity=0.328 Sum_probs=165.6
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----ceE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR----HSI 497 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~----~~~ 497 (667)
++...+.||+|+||+||+|++ +|+.||||++... ......+.+|+..+.+++|||||+++|+|.+++ ..+
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~-----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc-----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 456778899999999999998 5788999998532 111222345666677899999999999998754 579
Q ss_pred EEEEecCCCChHHHhcccc-------------------------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDA-------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+|||||++|+|.+++.... ...|.||||+|||+|.++++||+|||+|+.
T Consensus 78 lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 9999999999998775321 223669999999999999999999999997
Q ss_pred ccCCCCC----cccccccccccCCCC------------CCCchHHHHHHHHHHHHhCCCCCCCCccC-CCCh-------h
Q 042735 547 LKPDSSN----WSALVGTYRYVAPDY------------RKKCDVYSFRVLALEVIKGKHPRGFVSSI-LPSP-------S 602 (667)
Q Consensus 547 ~~~~~~~----~~~~~Gt~~y~aPE~------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~-~~~~-------~ 602 (667)
....... ....+||+.|||||+ +.|+|||||||++|||+||++|+...... .+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 6544322 234689999999993 34799999999999999998876532211 1110 0
Q ss_pred ---hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 603 ---VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 603 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..........+|.+|.... ..+....+.+++.+||+.||++||||.||+++|....
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCcccc-chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1111112223333332211 1234456788999999999999999999999987654
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.7e-43 Score=362.77 Aligned_cols=223 Identities=23% Similarity=0.262 Sum_probs=169.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||+||+|+. .+++.||||++..... +.+|++++++++|||||++++++.+++..|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45678888999999999999986 4588999999865321 2469999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCC-ceEEecccccccccCCCC-
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~- 552 (667)
|||||+||+|.+++.... ...|+||||+|||++.+| ++||+|||+|+.......
T Consensus 128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999999885432 122459999999999987 699999999997754321
Q ss_pred ----CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC-CCCCCCCC
Q 042735 553 ----NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD-PRLPPPSP 621 (667)
Q Consensus 553 ----~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 621 (667)
....++||+.||||| |+.++|||||||++|||+||+.||...........+. ..... ..+++..+
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~~~s 283 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA----SEPPPIREIPPSCA 283 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH----HSCCGGGGSCTTSC
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH----cCCCCchhcCccCC
Confidence 123468999999999 7889999999999999999999986433211111111 11000 01122111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.||++|||++|+++++......
T Consensus 284 ------~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 284 ------PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 2456788899999999999999999998776544
No 15
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-41 Score=391.37 Aligned_cols=327 Identities=31% Similarity=0.443 Sum_probs=242.8
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCcc-ccCCCCCCeeeccccccceeCCCCCccc--c----
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSS-VGNLSSLRYLFLFENNLSGSIPPSVGNL--M---- 75 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~~--~---- 75 (667)
++|+.|+|++|.+++.+|..|.++++|++|+|++|++.+.+|.. ++++++|++|+|++|++++.+|..+... +
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 67777777777777777777777777777777777777666654 6777777777777777766666554431 3
Q ss_pred ----------------------cCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCc
Q 042735 76 ----------------------LTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNN 133 (667)
Q Consensus 76 ----------------------L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~ 133 (667)
|+.|+|++|.+++.+|..+..+++|+.|++++|.+++.+|..+.++++|+.|+|++|.
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 5555555555555666666667777777777777777777777777777777777777
Q ss_pred cccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCcc
Q 042735 134 MRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKE 213 (667)
Q Consensus 134 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 213 (667)
+++.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..++++++|++|+|++|.+.+.+|..
T Consensus 454 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 533 (768)
T 3rgz_A 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGG
T ss_pred ccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHH
Confidence 77777777777777777777777777777777777777888888888777777777777788888888888877777777
Q ss_pred ccCCcccceeecccccccccCcccc-------------------------------------------------------
Q 042735 214 FGKLNSLTKLILRGNQLIGHLPSEI------------------------------------------------------- 238 (667)
Q Consensus 214 ~~~l~~L~~L~L~~n~l~~~~p~~~------------------------------------------------------- 238 (667)
++.+++|+.|++++|.+++.+|..+
T Consensus 534 l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 613 (768)
T 3rgz_A 534 LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613 (768)
T ss_dssp GGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCS
T ss_pred HcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence 7788888888888877776666433
Q ss_pred ---------------cCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 239 ---------------GSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 239 ---------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
+.+++|++|+|++|+++|.+|..+++++.|+.|+|++|++.+.+|..++.+++|+.||+++|.++
T Consensus 614 ~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~ 693 (768)
T 3rgz_A 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693 (768)
T ss_dssp CTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred ccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCccc
Confidence 23466778888888888888888888888888888888888888888888888888888888888
Q ss_pred CcCcccccCCcccccc----ccccccCCCC
Q 042735 304 REIPSQICSMECCEVF----CTITNSVPTN 329 (667)
Q Consensus 304 ~~ip~~~~~~~~~~~~----~~~~~~~~~~ 329 (667)
+.+|..+..+..++.+ |.+++.+|..
T Consensus 694 g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp ECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred CcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 8888887777666554 4456666654
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-42 Score=354.20 Aligned_cols=228 Identities=21% Similarity=0.405 Sum_probs=163.1
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~---- 494 (667)
.+||+..+.||+|+||+||+|+. .+++.||||++.... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence 46799999999999999999986 468899999986432 2234567999999999999999999999997654
Q ss_pred --------ceEEEEEecCCCChHHHhccccC---------------------------CcccccccCCeeecCCCceEEe
Q 042735 495 --------HSILIYEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLLDLEHKAHVS 539 (667)
Q Consensus 495 --------~~~lv~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld~~~~~kl~ 539 (667)
..|+|||||++|+|.+++..... ..|.||||+|||++.++.+||+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999988864321 1244999999999999999999
Q ss_pred cccccccccCCCC------------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCCh
Q 042735 540 DFGIAKFLKPDSS------------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSP 601 (667)
Q Consensus 540 DFGla~~~~~~~~------------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~ 601 (667)
|||+|+....... ..++.+||+.||||| |+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 9999997654321 123468999999999 7899999999999999997 653211
Q ss_pred hhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 602 SVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
..........+...|+ ..........+++.+||+.||++|||+.|++++.|+....|.
T Consensus 232 -~~~~~~~~~~~~~~p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p 289 (299)
T 4g31_A 232 -ERVRTLTDVRNLKFPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFP 289 (299)
T ss_dssp -HHHHHHHHHHTTCCCH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC---
T ss_pred -HHHHHHHHHhcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCC
Confidence 0001111112222221 122223345678889999999999999999999999876664
No 17
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-40 Score=382.82 Aligned_cols=319 Identities=34% Similarity=0.503 Sum_probs=255.6
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCC-CCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCC-Ccc-cccC
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNL-KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPS-VGN-LMLT 77 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~-~~L~ 77 (667)
++++|+.|+|++|.+++.+|..+.++ ++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|.. +.. .+|+
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 46899999999999998899888775 99999999999999999999999999999999999999888875 665 5699
Q ss_pred EEEcccccccccCCccccCCC---------------------------CccEEEeeCcccccccCccCCCCCCCcEEEcc
Q 042735 78 VLALENNHFTGNLRHNICRNG---------------------------ALERVIVGGNHFRGPIPKCLRNCPNLVRISLE 130 (667)
Q Consensus 78 ~L~L~~n~l~~~~~~~~~~~~---------------------------~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 130 (667)
+|+|++|.+++.+|..+..+. +|+.|++++|.+++.+|..+.++++|+.|+|+
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 999999999887777665543 45555555555555666667777777777777
Q ss_pred CCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccC
Q 042735 131 GNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 131 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 210 (667)
+|.+++.+|..++.+++|++|++++|.+.+.+|..+..+++|++|++++|.+++.+|..+.++++|++|+|++|.+.+.+
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 506 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence 77777777777777777777777777777777777777777777777777777777777777888888888888887777
Q ss_pred CccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhh---------------------------
Q 042735 211 PKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLG--------------------------- 263 (667)
Q Consensus 211 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--------------------------- 263 (667)
|..|+.+++|+.|++++|++.+.+|..++.+++|+.|++++|.++|.+|..+.
T Consensus 507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (768)
T 3rgz_A 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTT
T ss_pred ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccc
Confidence 87788888888888888888777888888888888888888877766665442
Q ss_pred -------------------------------------------cccCCCeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 264 -------------------------------------------NLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 264 -------------------------------------------~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
.+++|+.|++++|++.+.+|.+++.++.|+.|++++|
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N 666 (768)
T 3rgz_A 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666 (768)
T ss_dssp CCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCC
Confidence 2356778888888888888888888888888888888
Q ss_pred CCCCcCcccccCCcccccc
Q 042735 301 FLGREIPSQICSMECCEVF 319 (667)
Q Consensus 301 ~l~~~ip~~~~~~~~~~~~ 319 (667)
.+++.+|..++.+..++.+
T Consensus 667 ~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 667 DISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEE
T ss_pred ccCCCCChHHhCCCCCCEE
Confidence 8888888888877776655
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=346.15 Aligned_cols=237 Identities=18% Similarity=0.286 Sum_probs=172.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe------C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------A 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------~ 493 (667)
++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+++|++++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 4689999999999999999986 5689999999875433 23345678999999999999999999999864 3
Q ss_pred CceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
+..|+|||||+ |+|.+.+.... ...|.||||+|||++.++.+||+|||+|+.+..
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred CEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 57899999996 67988775432 123559999999999999999999999987643
Q ss_pred C----CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh------------
Q 042735 550 D----SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM------------ 606 (667)
Q Consensus 550 ~----~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~------------ 606 (667)
. ....++.+||+.||||| |+.++||||+||++|||+||++||...+.......+...
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 2 22345679999999999 477899999999999999999998633211000000000
Q ss_pred ---hh---ccccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 ---RL---DEMLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 ---~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.. ...+.+..+.+... ......++.+++.+||+.||++|||++|+++|.||...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 00 00000111100000 00011246788899999999999999999999999764
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.1e-39 Score=356.56 Aligned_cols=233 Identities=20% Similarity=0.252 Sum_probs=175.6
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC--chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS--DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
+++|+..++||+|+||+||+|+. .+|+.||||++.+.... ..........+++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 47899999999999999999986 45889999998542110 1111112223446677788999999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+|||||+||+|.+++.... ...|+||||+|||||.+|++||+|||+|+......
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~- 346 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 346 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC-
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC-
Confidence 99999999999998875432 12245999999999999999999999999765432
Q ss_pred CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
..+.+||+.||||| |+.++||||+||++|||+||+.||....... ......... ......|...+
T Consensus 347 -~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-~~~i~~~i~--~~~~~~p~~~S---- 418 (689)
T 3v5w_A 347 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTL--TMAVELPDSFS---- 418 (689)
T ss_dssp -CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-HHHHHHHHH--HCCCCCCTTSC----
T ss_pred -CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhhc--CCCCCCCccCC----
Confidence 34679999999999 6788999999999999999999986322110 001111111 11222232222
Q ss_pred HHHHHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 626 KLISIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
.++.+++.+||+.||.+|++ ++||++|.||..+.|+
T Consensus 419 --~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~ 459 (689)
T 3v5w_A 419 --PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQ 459 (689)
T ss_dssp --HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred --HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHH
Confidence 24567888999999999998 8999999999988775
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8e-39 Score=334.59 Aligned_cols=234 Identities=23% Similarity=0.270 Sum_probs=167.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHAR 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~ 494 (667)
.+.|+..+.||+|+||+||+|+.+ .++.||||++.... ....+.+|++++.++ +|||||++++++.+.+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 367999999999999999999742 45789999886432 234578999999998 5999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccc---------------------cCCcccccccCCeeecCC-CceEEecccccccccCCC-
Q 042735 495 HSILIYEYLKRGSLATNLSND---------------------AAAEELDISSKNVLLDLE-HKAHVSDFGIAKFLKPDS- 551 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~---------------------~~~~~~dlk~~NiLld~~-~~~kl~DFGla~~~~~~~- 551 (667)
..|+|||||++|+|.+.+..- ....|+||||+|||++.+ +.+||+|||+|+......
T Consensus 94 ~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp EEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred EEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 999999999999998877431 112355999999999976 899999999998654321
Q ss_pred ---------------------------CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC
Q 042735 552 ---------------------------SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI 597 (667)
Q Consensus 552 ---------------------------~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~ 597 (667)
...++.+||+.||||| |+.++||||+||++|||+||+.||......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 1123468999999999 677899999999999999999998422110
Q ss_pred C--------------------------------CChhhh--hhhhccccCCCCCCCC----------CchHHHHHHHHHH
Q 042735 598 L--------------------------------PSPSVI--NMRLDEMLDPRLPPPS----------PDVQGKLISIMEV 633 (667)
Q Consensus 598 ~--------------------------------~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 633 (667)
. +..... ..... ..+...+... ........+..++
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLR-GMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhc-cccccccccccccccccccccccccCCHHHHHH
Confidence 0 000000 00000 0000000000 0000111246688
Q ss_pred HHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 634 AFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 634 ~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+.+||+.||++|||++|+++|.||..+
T Consensus 333 l~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred HHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 899999999999999999999998653
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.3e-38 Score=351.13 Aligned_cols=230 Identities=19% Similarity=0.317 Sum_probs=178.1
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999976 568899999986532 2345678999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCC--CceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLE--HKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~--~~~kl~DFGla~~~~~~~ 551 (667)
|||||+||+|.+++.... ...|+||||+|||++.+ +.+||+|||+|+.+....
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 999999999998885321 11245999999999854 899999999999876443
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
...+.+||+.||||| |+.++||||+||++|||++|+.||...... ... ..+.......+.+....
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~----~~~----~~i~~~~~~~~~~~~~~ 382 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD----ETL----RNVKSCDWNMDDSAFSG 382 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHH----HHHHTTCCCCCSGGGTT
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHH----HHHHhCCCCCCcccccC
Confidence 345678999999999 678999999999999999999998633211 111 11111111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
....+.+++.+||+.||++|||++|+++|.|+.....
T Consensus 383 ~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 1234668888999999999999999999999875443
No 22
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-37 Score=338.13 Aligned_cols=303 Identities=22% Similarity=0.198 Sum_probs=200.6
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccC-CccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSL-PSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
++|+.|+|++|.++++.|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..++. .+|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999988999999999999999999987444 678999999999999999999888888887 5699999
Q ss_pred cccccccccCCcc--ccCCCCccEEEeeCcccccccCcc-CCCCCCCcEEEccCCccccccchhhhcC------------
Q 042735 81 LENNHFTGNLRHN--ICRNGALERVIVGGNHFRGPIPKC-LRNCPNLVRISLEGNNMRGTISEAFGIY------------ 145 (667)
Q Consensus 81 L~~n~l~~~~~~~--~~~~~~L~~L~l~~n~~~~~~p~~-l~~l~~L~~L~L~~n~~~~~~~~~~~~l------------ 145 (667)
|++|.+++..+.. +..+.+|+.|++++|.+.+..|.. +.++++|++|+|++|.+++..+..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755544 888999999999999999887876 8999999999999999998888777655
Q ss_pred ----------------------CCCCEEECcCCccCCccCccCCC-----------------------------------
Q 042735 146 ----------------------LNLTFLDISDNNFFGEIASNWGK----------------------------------- 168 (667)
Q Consensus 146 ----------------------~~L~~L~L~~n~l~~~~~~~~~~----------------------------------- 168 (667)
++|++|++++|.+.+..|..+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 34555555555444333222110
Q ss_pred ----CCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCC
Q 042735 169 ----CPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKL 244 (667)
Q Consensus 169 ----l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 244 (667)
.++|+.|++++|.+.+..|..+.++++|++|+|++|.+.+..|..|+++++|+.|+|++|.+.+..|..++++++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 1344444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred CeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCc
Q 042735 245 EFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 245 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
++|+|++|++++..|..+..+++|+.|++++|++.+..+..+..+++|+.|++++|++...
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 4445444444444444444444444444444444433333344444444445544444443
No 23
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=328.34 Aligned_cols=302 Identities=21% Similarity=0.133 Sum_probs=274.8
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
++|+.|+|++|.|+++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+.. .+|+.|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 47899999999999988899999999999999999999888999999999999999999998665556666 56999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
++|.+.+..+..+..+.+|+.|++++|.+.+..|..+.++++|+.|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 99999998888999999999999999999988888999999999999999999988888899999999999999999888
Q ss_pred cCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCC
Q 042735 162 IASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSL 241 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 241 (667)
.+..|..+++|+.|++++|.+.+.+|..+....+|+.|+|++|.+.+..+..|..+++|+.|+|++|.+.+..+..|.++
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 88899999999999999998888888777777899999999999986555678999999999999999998888889999
Q ss_pred CCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 242 TKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 242 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
++|+.|+|++|++++..|..+.++++|+.|++++|++.+..+..|..+++|++|++++|++..
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999889999999999999999999887777788899999999999998853
No 24
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.7e-36 Score=343.08 Aligned_cols=312 Identities=19% Similarity=0.228 Sum_probs=254.4
Q ss_pred CCCCCcEEeccCCcCcCC-----------------CCcccc--CCCCCCEEEccCccccccCCccccCCCCCCeeecccc
Q 042735 1 NLTNLRELHLRDNYLTGL-----------------IPTETW--NLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFEN 61 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 61 (667)
++++|+.|+|++|.+++. +|..+. ++++|++|+|++|++.+.+|..|+++++|++|+|++|
T Consensus 204 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 204 RLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 478999999999999985 788888 9999999999999999999999999999999999999
Q ss_pred c-cce-eCCCCCcc-------cccCEEEcccccccccCCc--cccCCCCccEEEeeCcccccccCccCCCCCCCcEEEcc
Q 042735 62 N-LSG-SIPPSVGN-------LMLTVLALENNHFTGNLRH--NICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLE 130 (667)
Q Consensus 62 ~-l~~-~~p~~~~~-------~~L~~L~L~~n~l~~~~~~--~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 130 (667)
+ +++ .+|..++. .+|+.|+|++|.++ .+|. .+..+++|+.|++++|+++|.+| .+.++++|+.|+|+
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 8 887 78887766 56999999999998 7887 89999999999999999998888 88889999999999
Q ss_pred CCccccccchhhhcCCC-CCEEECcCCccCCccCccCCCCC--CCCEEEccCCcCCCCcCcccc-------CCCCcCeee
Q 042735 131 GNNMRGTISEAFGIYLN-LTFLDISDNNFFGEIASNWGKCP--KLSTLNVSMNNITRSIPLEIG-------NLSTLNEFD 200 (667)
Q Consensus 131 ~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~p~~~~-------~l~~L~~L~ 200 (667)
+|.++ .+|..+..+++ |++|++++|.+. .+|..+..++ +|+.|++++|.+.+..|..+. .+++|+.|+
T Consensus 362 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~ 439 (636)
T 4eco_A 362 YNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSIN 439 (636)
T ss_dssp SSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEE
T ss_pred CCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEE
Confidence 99988 67777888888 999999999887 6777776654 888888888888888887777 777888888
Q ss_pred ccCCcccccCCccccCCcccceeecccccccccCccc-ccCCC-------CCCeeeccCCcCCccchhhhh--cccCCCe
Q 042735 201 LSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSE-IGSLT-------KLEFLNLSTNRFSSLIPESLG--NLLKLHY 270 (667)
Q Consensus 201 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~ 270 (667)
|++|.+.+..+..+..+++|+.|+|++|+++ .+|.. +..+. +|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 440 Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~ 517 (636)
T 4eco_A 440 LSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVG 517 (636)
T ss_dssp CCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCE
T ss_pred CcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCE
Confidence 8888887443344566788888888888887 44443 33232 7888888888887 4566665 7788888
Q ss_pred ecCCCccCccccchhhhcCCCCCEEEC------cCCCCCCcCcccccCCcccccc
Q 042735 271 LDLSKYQFIQELPKELGKLVQLSELEL------SHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 271 L~ls~n~~~~~~p~~l~~l~~L~~L~l------~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
|++++|++.+ +|..++.+++|+.|++ ++|.+.+.+|..++.+..+..+
T Consensus 518 L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L 571 (636)
T 4eco_A 518 IDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQL 571 (636)
T ss_dssp EECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred EECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEE
Confidence 8888888766 7877888888888888 4566777777777666655544
No 25
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-36 Score=314.74 Aligned_cols=239 Identities=24% Similarity=0.339 Sum_probs=184.3
Q ss_pred CCcCHHHHHHHHcC----------CcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh
Q 042735 409 GKFDYVEIIRAIND----------FDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK 477 (667)
Q Consensus 409 ~~~~~~~~~~~~~~----------f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~ 477 (667)
..++++++..++.. |+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 56888888888764 666678999999999999875 688999999864322 224568899999999
Q ss_pred cCCCCeeEEEEEEEeCCceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCC
Q 042735 478 IRHRNIVKFYGFCSHARHSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEH 534 (667)
Q Consensus 478 l~H~niv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~ 534 (667)
++|||||++++++...+..++||||+++|+|.+.+..... ..|.||||+||+++.++
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence 9999999999999999999999999999999988764321 12349999999999999
Q ss_pred ceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRL 608 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 608 (667)
.+||+|||+++.............||+.|+||| |+.++|||||||++|||+||+.||..... ......+
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----~~~~~~~ 253 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRL 253 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHH
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 999999999987665444445678999999999 57789999999999999999999853221 1111111
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 609 DEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.... .......+.+++.+||+.||++|||++|++++.|+...
T Consensus 254 ~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 254 RDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred hcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 1111111111 11112346678889999999999999999999998644
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.3e-36 Score=311.41 Aligned_cols=226 Identities=24% Similarity=0.417 Sum_probs=176.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++++++|||||++++++...+..++|
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc----cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 5789999999999999999985 5688999998754322 2245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++...........
T Consensus 96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 999999999988754321 124499999999999999999999999877655555556
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..||+.|+||| |+.++|||||||++|||+||+.||...... .... .......+....+ ......+
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~-~~~~~~~~~~~~~----~~~~~~~ 246 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALY-LIATNGTPELQNP----EKLSAIF 246 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHHHHCSCCCSCG----GGSCHHH
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHH-HHHhCCCCCCCCc----cccCHHH
Confidence 78999999999 678999999999999999999998532210 0000 0001111111111 1112346
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+++.+||+.||++|||++|++++.|+..
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h~~~~~ 275 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQHQFLKI 275 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence 67888999999999999999999998864
No 27
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.9e-36 Score=338.57 Aligned_cols=303 Identities=23% Similarity=0.287 Sum_probs=273.5
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCcc-ccc-cCCccccCC------CCCCeeeccccccceeCCC--C
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQ-FRG-SLPSSVGNL------SSLRYLFLFENNLSGSIPP--S 70 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~n~l~~~~p~--~ 70 (667)
++++|++|+|++|.+.+.+|..+.++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 37899999999999999999999999999999999998 998 899999887 99999999999999 7888 7
Q ss_pred Ccc-cccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCC-CcEEEccCCccccccchhhhcCC--
Q 042735 71 VGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPN-LVRISLEGNNMRGTISEAFGIYL-- 146 (667)
Q Consensus 71 ~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~-L~~L~L~~n~~~~~~~~~~~~l~-- 146 (667)
++. .+|+.|+|++|.++|.+| .+..+.+|+.|++++|.++ .+|..+.++++ |+.|+|++|.++ .+|..+....
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~ 402 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVS 402 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSS
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccC
Confidence 777 469999999999999999 8999999999999999999 78888999999 999999999998 6777777655
Q ss_pred CCCEEECcCCccCCccCccCC-------CCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCcc-ccCC-
Q 042735 147 NLTFLDISDNNFFGEIASNWG-------KCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKE-FGKL- 217 (667)
Q Consensus 147 ~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l- 217 (667)
+|++|++++|.+.+..|..+. .+++|+.|+|++|.++...+..+..+++|++|+|++|.+. .+|.. +..+
T Consensus 403 ~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~ 481 (636)
T 4eco_A 403 VMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDEN 481 (636)
T ss_dssp CEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETT
T ss_pred ccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcccc
Confidence 899999999999999999888 8889999999999999655555667999999999999998 45543 4333
Q ss_pred ------cccceeecccccccccCccccc--CCCCCCeeeccCCcCCccchhhhhcccCCCeecC------CCccCccccc
Q 042735 218 ------NSLTKLILRGNQLIGHLPSEIG--SLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDL------SKYQFIQELP 283 (667)
Q Consensus 218 ------~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l------s~n~~~~~~p 283 (667)
++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|++ ++|++.+.+|
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p 559 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCC
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccCh
Confidence 39999999999998 6888887 99999999999999998 7999999999999999 5678889999
Q ss_pred hhhhcCCCCCEEECcCCCCCCcCccccc
Q 042735 284 KELGKLVQLSELELSHNFLGREIPSQIC 311 (667)
Q Consensus 284 ~~l~~l~~L~~L~l~~n~l~~~ip~~~~ 311 (667)
..++.+++|++|++++|.+ +.+|..+.
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l-~~ip~~~~ 586 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI-RKVNEKIT 586 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred HHHhcCCCCCEEECCCCcC-CccCHhHh
Confidence 9999999999999999999 78887654
No 28
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.7e-36 Score=306.62 Aligned_cols=227 Identities=27% Similarity=0.386 Sum_probs=165.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.++|+..+.||+|+||.||+|+. .+..||||++..... .....+.|.+|++++++++|||||++++++.+.+..++|
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 46788899999999999999987 577899999875433 233456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc---------------------------C--CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 500 YEYLKRGSLATNLSNDA---------------------------A--AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~---------------------------~--~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
|||+++|+|.+.+.... . ..|.||||+||+++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999988775321 1 345699999999999999999999999865544
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
........||+.|+||| ++.++|||||||++|||+||+.||..... ................+...+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~--- 265 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVVAAVGFKCKRLEIPRNLN--- 265 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHHHHHHSCCCCCCCTTSC---
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCC---
Confidence 33344568999999999 57899999999999999999999864321 111111100111112222221
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|++|||++|+++.|....
T Consensus 266 ---~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 266 ---PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp ---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 24667888999999999999999999887653
No 29
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7e-35 Score=329.21 Aligned_cols=170 Identities=23% Similarity=0.203 Sum_probs=84.6
Q ss_pred CCCCCEEECcCCccCCc--cCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCC-ccccCCcccc
Q 042735 145 YLNLTFLDISDNNFFGE--IASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIP-KEFGKLNSLT 221 (667)
Q Consensus 145 l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~ 221 (667)
+++|++|++++|.+.+. .+..+..+++|+.|++++|.+.+ +|..+.++++|+.|++++|.+.+..| ..+..+++|+
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 34455555555555433 24444555555555555555443 33445555555555555555544444 3445555555
Q ss_pred eeecccccccccCcccccCCCCCCeeeccCCcCCc-cchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 222 KLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSS-LIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 222 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
.|++++|.+.+..|..++++++|++|++++|.+++ .+|..+..+++|+.|++++|++.+..|..++.+++|++|++++|
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 507 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCC
Confidence 55555555554444455555555555555555544 23444455555555555555554444445555555555555555
Q ss_pred CCCCcCcccccCCcc
Q 042735 301 FLGREIPSQICSMEC 315 (667)
Q Consensus 301 ~l~~~ip~~~~~~~~ 315 (667)
.+.+..|..+..+..
T Consensus 508 ~l~~~~~~~~~~l~~ 522 (606)
T 3vq2_A 508 NLLFLDSSHYNQLYS 522 (606)
T ss_dssp CCSCEEGGGTTTCTT
T ss_pred cCCCcCHHHccCCCc
Confidence 554444444444333
No 30
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.2e-36 Score=311.37 Aligned_cols=242 Identities=31% Similarity=0.477 Sum_probs=185.4
Q ss_pred HHHHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 414 VEIIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 414 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++..++++|+..+.||+|+||.||+|...++..||||++..... ...+.+.+|++++++++|||||++++++.+.
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS----QGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 344456789999999999999999999988899999998765322 2345799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC----------------------------CcccccccCCeeecCCCceEEecccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA----------------------------AEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~----------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
+..++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999999988754321 1134999999999999999999999998
Q ss_pred cccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-------hhhhhcc
Q 042735 546 FLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV-------INMRLDE 610 (667)
Q Consensus 546 ~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~-------~~~~~~~ 610 (667)
...... .......||+.|+||| |+.++|||||||++|||+||+.||............ .......
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence 654322 1234457999999999 688999999999999999999998632211111000 0111122
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+++...... .......+.+++.+||+.||++|||++|++++|......
T Consensus 268 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 268 IVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSSCTTCS--CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcChhhcccc--CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 3333333222 234456788899999999999999999999999877544
No 31
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.3e-36 Score=312.93 Aligned_cols=245 Identities=28% Similarity=0.497 Sum_probs=188.2
Q ss_pred CCcCHHHHHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEE
Q 042735 409 GKFDYVEIIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYG 488 (667)
Q Consensus 409 ~~~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g 488 (667)
..+++.++....++|+..+.||+|+||.||+|+..++..||||++...... .....|.+|++++++++|||||++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceEE
Confidence 457888999899999999999999999999999888999999998654321 11235889999999999999999999
Q ss_pred EEEeCCceEEEEEecCCCChHHHhcccc-------------------------------CCcccccccCCeeecCCCceE
Q 042735 489 FCSHARHSILIYEYLKRGSLATNLSNDA-------------------------------AAEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 489 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~dlk~~NiLld~~~~~k 537 (667)
++.+.+..++||||+++|+|.+.+.... ...|.||||+|||++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999988775321 223459999999999999999
Q ss_pred EecccccccccCCCC-CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-------
Q 042735 538 VSDFGIAKFLKPDSS-NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV------- 603 (667)
Q Consensus 538 l~DFGla~~~~~~~~-~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~------- 603 (667)
|+|||+++....... ......||+.|+||| ++.++|||||||++|||+||+.||............
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 999999987654332 234456999999999 577999999999999999999998521100000000
Q ss_pred --hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 604 --INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 604 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.........+....... .......+.+++.+||+.+|++|||++||+++|...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSC--CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HhhchhhhhhcChhhcccc--CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 01111222233333222 234556788999999999999999999999999864
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.5e-35 Score=300.42 Aligned_cols=246 Identities=29% Similarity=0.450 Sum_probs=189.5
Q ss_pred CCcCHHHHHHHHcCCcCc------ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC
Q 042735 409 GKFDYVEIIRAINDFDAK------YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN 482 (667)
Q Consensus 409 ~~~~~~~~~~~~~~f~~~------~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 482 (667)
..|++.++..++++|+.. +.||+|+||.||+|.. ++..+|||++............+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468899999999999888 8899999999999987 577899999875433223334567999999999999999
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCChHHHhcccc---------------------------CCcccccccCCeeecCCCc
Q 042735 483 IVKFYGFCSHARHSILIYEYLKRGSLATNLSNDA---------------------------AAEELDISSKNVLLDLEHK 535 (667)
Q Consensus 483 iv~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------------------~~~~~dlk~~NiLld~~~~ 535 (667)
|+++++++.+.+..++||||+++|+|.+.+.... ...|.||||+||+++.++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~ 171 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT 171 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc
Confidence 9999999999999999999999999998875321 0113499999999999999
Q ss_pred eEEecccccccccCCCCC--cccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh---
Q 042735 536 AHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN--- 605 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~--- 605 (667)
+||+|||+++........ .....||+.|+||| ++.++|||||||++|||+||+.||..............
T Consensus 172 ~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 251 (307)
T 2nru_A 172 AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251 (307)
T ss_dssp EEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHH
T ss_pred EEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhh
Confidence 999999999876543221 23457999999999 57899999999999999999999864332211111100
Q ss_pred ---hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 606 ---MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 606 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
......++..+.... ......+.+++.+||+.+|++|||+.||+++|...
T Consensus 252 ~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 252 DEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp TTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred hhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 011222333332222 23445677899999999999999999999998764
No 33
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.1e-36 Score=309.97 Aligned_cols=231 Identities=21% Similarity=0.323 Sum_probs=178.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 468999999999999999999874 5889999987542110 11224568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|..++.... ...|.||||+|||++.++.+||+|||+++.........
T Consensus 83 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 999999999988775321 12245999999999999999999999998654444445
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...+||+.|+||| |+.++|||||||++|||+||+.||..... .......... ...++...+ .
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~~--~~~~p~~~s------~ 230 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILME--EIRFPRTLS------P 230 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC------H
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH----HHHHHHHHcC--CCCCCCCCC------H
Confidence 6678999999999 57899999999999999999999853221 1111111111 122222222 2
Q ss_pred HHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
.+.+++.+||+.||++|| +++||++|.||....|.
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~ 270 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHH
Confidence 456788899999999999 99999999999876554
No 34
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-34 Score=324.80 Aligned_cols=316 Identities=19% Similarity=0.152 Sum_probs=263.2
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
.+++.|+|++|.|+++.|..|.++++|++|+|++|++.+..|.+|+++++|++|+|++|++++..|..++. .+|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999999999999999999999999999989999999999999999999999888888887 56999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCC--EEECcCCccC
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLT--FLDISDNNFF 159 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~--~L~L~~n~l~ 159 (667)
++|.+++..+..+..+.+|+.|++++|.+.+..+..+..+++|+.|+|++|.+++..+..++.+++|+ .|++++|.+.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788899999999999999999985544555699999999999999988899999999999 8999999988
Q ss_pred CccCccCCCC---------------------------------------------------CCCCEEEccCCcCCCCcCc
Q 042735 160 GEIASNWGKC---------------------------------------------------PKLSTLNVSMNNITRSIPL 188 (667)
Q Consensus 160 ~~~~~~~~~l---------------------------------------------------~~L~~L~L~~n~l~~~~p~ 188 (667)
+..|..+... .+|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 7766554321 1567778888888777777
Q ss_pred cccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchh-hhhcccC
Q 042735 189 EIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPE-SLGNLLK 267 (667)
Q Consensus 189 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~ 267 (667)
.|.++++|++|++++|.+. .+|..+..+++|+.|++++|.+.+..|..++.+++|++|++++|.+.+.+|. .+..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 7888888888888888876 5677788888888888888888877777888888888888888887755544 4777888
Q ss_pred CCeecCCCccCcccc--chhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 268 LHYLDLSKYQFIQEL--PKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 268 L~~L~ls~n~~~~~~--p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
|+.|++++|.+.+.. |..+..+++|++|++++|.+.+..|..+..+..+..+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 888888888876655 6677888888888888888777667666665555444
No 35
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-34 Score=327.88 Aligned_cols=315 Identities=20% Similarity=0.185 Sum_probs=229.6
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
++|+.|+|++|.++++.+..|.++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..|..++. .+|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 35677777777777666666777777777777777777666667777777777777777776666666655 34777777
Q ss_pred ccccccccCCccccCCCCccEEEeeCccccc-ccCccCCCCCCCcEEEccCCccccccchhhhcC---------------
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRG-PIPKCLRNCPNLVRISLEGNNMRGTISEAFGIY--------------- 145 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l--------------- 145 (667)
++|.+.+..+..+.++.+|+.|++++|.+.+ .+|..+.++++|++|+|++|++++..+..++.+
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 7777766655666667777777777777664 456667777777777777666655443322211
Q ss_pred --------------------------------------------------------------------------------
Q 042735 146 -------------------------------------------------------------------------------- 145 (667)
Q Consensus 146 -------------------------------------------------------------------------------- 145 (667)
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence
Q ss_pred -----------------------------------CCCCEEECcCCccCCccC--------------------ccCCCCC
Q 042735 146 -----------------------------------LNLTFLDISDNNFFGEIA--------------------SNWGKCP 170 (667)
Q Consensus 146 -----------------------------------~~L~~L~L~~n~l~~~~~--------------------~~~~~l~ 170 (667)
++|+.|++++|.+ +.+| ..+..++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~ 350 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALP 350 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCC
Confidence 2233333333333 2222 1234567
Q ss_pred CCCEEEccCCcCCCC--cCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCc-ccccCCCCCCee
Q 042735 171 KLSTLNVSMNNITRS--IPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLP-SEIGSLTKLEFL 247 (667)
Q Consensus 171 ~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L 247 (667)
+|+.|++++|.+++. .|..+..+++|++|++++|.+.+ +|..|..+++|+.|++++|.+.+..| ..+..+++|++|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 788888888888765 37788899999999999998875 55788899999999999999988777 678899999999
Q ss_pred eccCCcCCccchhhhhcccCCCeecCCCccCcc-ccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 248 NLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ-ELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 248 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~-~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
++++|.+++..|..+.++++|+.|++++|++.+ .+|..++.+++|++|++++|.+.+..|..+..+..+..+
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 999999998888889999999999999998877 478888999999999999999988888777777666554
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.7e-36 Score=309.23 Aligned_cols=226 Identities=22% Similarity=0.327 Sum_probs=176.3
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 46789999999999999999986 6788999999864322 22345678999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++...... ..
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 170 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KL 170 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-GG
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-cc
Confidence 999999999988774321 12245999999999999999999999998765432 34
Q ss_pred ccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
...+||+.|+||| | +.++||||+||++|||+||+.||..... .......... ....|...+
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~--~~~~p~~~s------ 238 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----KELRERVLRG--KYRIPFYMS------ 238 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC------
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhC--CCCCCCCCC------
Confidence 5678999999999 3 3689999999999999999999864321 1111111111 112222111
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.||.+|||++|++++.|+...
T Consensus 239 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 239 TDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 245678889999999999999999999998653
No 37
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.5e-34 Score=321.89 Aligned_cols=317 Identities=21% Similarity=0.210 Sum_probs=221.4
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCC--eeeccccccceeCCCCCccc-----
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLR--YLFLFENNLSGSIPPSVGNL----- 74 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~L~L~~n~l~~~~p~~~~~~----- 74 (667)
+++|++|+|++|.++++.+..+..+++|++|+|++|++++..|..|+.+++|+ .|++++|.+++..|..+...
T Consensus 128 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L 207 (606)
T 3t6q_A 128 QKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSL 207 (606)
T ss_dssp CTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred CCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccc
Confidence 34555555555555543333333455555555555555555555555566655 55666666555554443321
Q ss_pred -----------------------------------------------ccCEEEcccccccccCCccccCCCCccEEEeeC
Q 042735 75 -----------------------------------------------MLTVLALENNHFTGNLRHNICRNGALERVIVGG 107 (667)
Q Consensus 75 -----------------------------------------------~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~ 107 (667)
.|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 208 ~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 208 NFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTA 287 (606)
T ss_dssp ECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTT
T ss_pred ccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccC
Confidence 355566666666665566677778888888888
Q ss_pred cccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCc-cCCCCCCCCEEEccCCcCCCCc
Q 042735 108 NHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIAS-NWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 108 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
|.++ .+|..+.++++|++|++++|.+++..+..+..+++|++|++++|.+.+.++. .+..+++|+.|++++|.+.+..
T Consensus 288 n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 366 (606)
T 3t6q_A 288 THLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSD 366 (606)
T ss_dssp SCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEE
T ss_pred CccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccccc
Confidence 8887 5677788888888888888888877777888888888888888887766654 4778888888888888887655
Q ss_pred --CccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcc-cccCCCCCCeeeccCCcCCccchhhhh
Q 042735 187 --PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS-EIGSLTKLEFLNLSTNRFSSLIPESLG 263 (667)
Q Consensus 187 --p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 263 (667)
+..+.++++|++|++++|.+.+..|..|..+++|+.|++++|.+.+..+. .+..+++|++|++++|.+++..|..+.
T Consensus 367 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 446 (606)
T 3t6q_A 367 CCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFD 446 (606)
T ss_dssp ESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTT
T ss_pred CcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHh
Confidence 66777888888888888888777777788888888888888887766554 377778888888888888777777777
Q ss_pred cccCCCeecCCCccCccc---cchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 264 NLLKLHYLDLSKYQFIQE---LPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 264 ~l~~L~~L~ls~n~~~~~---~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
.+++|+.|++++|++.+. .+..+..+++|++|++++|.+.+..|..+..++.+..+
T Consensus 447 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 447 GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 778888888888777652 23457777778888888877776666666665555443
No 38
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-35 Score=307.70 Aligned_cols=233 Identities=24% Similarity=0.305 Sum_probs=171.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc----e
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH----S 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~----~ 496 (667)
++|+..+.||+|+||.||+|+.. ++.||||++... ......+.+|+.++++++|||||++++++.+... .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 67889999999999999999876 688999998532 2233456779999999999999999999987543 6
Q ss_pred EEEEEecCCCChHHHhcccc---------------------------------CCcccccccCCeeecCCCceEEecccc
Q 042735 497 ILIYEYLKRGSLATNLSNDA---------------------------------AAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~---------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
++||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999988764321 233559999999999999999999999
Q ss_pred cccccCCCC--CcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-------
Q 042735 544 AKFLKPDSS--NWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV------- 603 (667)
Q Consensus 544 a~~~~~~~~--~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~------- 603 (667)
++....... ......||+.|+|||. +.++|||||||++|||+||+.||.........+..
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 987654332 2334679999999993 23579999999999999999998643221111110
Q ss_pred -----hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 604 -----INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 604 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..........+.++... ........+.+++.+||+.||++|||++||+++|.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYW-QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccc-cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00011111111111111 111234567889999999999999999999999887543
No 39
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=308.67 Aligned_cols=227 Identities=22% Similarity=0.332 Sum_probs=168.0
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++...... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 46788999999999999999986 56889999998654322 123468899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC-CC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-SN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-~~ 553 (667)
||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++...... ..
T Consensus 86 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999999988774321 12245999999999999999999999998654332 22
Q ss_pred cccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
....+||+.|+||| ++.++||||+||++|||+||+.||...... ......... ....+...+
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~~~i~~~--~~~~p~~~s----- 234 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM----ALYKKIMRG--KYDVPKWLS----- 234 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHT--CCCCCTTCC-----
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHcC--CCCCCCCCC-----
Confidence 34568999999999 267899999999999999999998632211 111111111 111222111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.||++|||++|++++.|+...+
T Consensus 235 -~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~ 268 (347)
T 3zgw_A 235 -PSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY 268 (347)
T ss_dssp -HHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred -HHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence 2356788899999999999999999999987643
No 40
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=318.63 Aligned_cols=231 Identities=19% Similarity=0.287 Sum_probs=175.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|.. .++..+|+|++..... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 46789999999999999999975 5688899999875432 23345679999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeec---CCCceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLD---LEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld---~~~~~kl~DFGla~~~~~~~ 551 (667)
||||+++|+|.+.+.... ...|.||||+|||++ .++.+||+|||+++......
T Consensus 88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 999999999988765322 122459999999998 56889999999998776554
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......+||+.|+||| |+.++||||+||++|||++|+.||..... ............+ .+ .+....
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~--~~--~~~~~~ 239 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD--FP--SPEWDT 239 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHTCCC--CC--TTTTTT
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHhCCCC--CC--cccccc
Confidence 4455678999999999 67899999999999999999999853221 1111111111111 11 111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+++.+||+.||++|||++|++++.|+...
T Consensus 240 ~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 240 VTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 12346678889999999999999999999988643
No 41
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.4e-35 Score=335.01 Aligned_cols=308 Identities=20% Similarity=0.243 Sum_probs=217.4
Q ss_pred CCCCCcEEeccCCcCcC-----------------CCCcccc--CCCCCCEEEccCccccccCCccccCCCCCCeeecccc
Q 042735 1 NLTNLRELHLRDNYLTG-----------------LIPTETW--NLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFEN 61 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 61 (667)
+|++|+.|+|++|.|++ .+|..+. ++++|++|+|++|++.+.+|..|+++++|++|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 47899999999999998 2788877 9999999999999999999999999999999999999
Q ss_pred c-cce-eCCCCCccc--------ccCEEEcccccccccCCc--cccCCCCccEEEeeCcccccccCccCCCCCCCcEEEc
Q 042735 62 N-LSG-SIPPSVGNL--------MLTVLALENNHFTGNLRH--NICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISL 129 (667)
Q Consensus 62 ~-l~~-~~p~~~~~~--------~L~~L~L~~n~l~~~~~~--~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 129 (667)
+ +++ .+|..++.+ +|+.|+|++|.++ .+|. .+..+++|+.|++++|.++ .+| .+.++++|+.|+|
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 8 887 788766553 6999999999998 7887 8999999999999999998 777 8899999999999
Q ss_pred cCCccccccchhhhcCCC-CCEEECcCCccCCccCccCCCCCC--CCEEEccCCcCCCCcCcc---cc--CCCCcCeeec
Q 042735 130 EGNNMRGTISEAFGIYLN-LTFLDISDNNFFGEIASNWGKCPK--LSTLNVSMNNITRSIPLE---IG--NLSTLNEFDL 201 (667)
Q Consensus 130 ~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~p~~---~~--~l~~L~~L~L 201 (667)
++|.++ .+|..+..+++ |+.|+|++|.+. .+|..+..++. |+.|+|++|.+.+.+|.. +. .+++|+.|+|
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 999998 77778888888 999999999887 67777766543 777777777776654421 11 2235555666
Q ss_pred cCCcccccCCcc-ccCCcccceeecccccccccCcccccCC--------CCCCeeeccCCcCCccchhhhh--cccCCCe
Q 042735 202 SLNHIVGKIPKE-FGKLNSLTKLILRGNQLIGHLPSEIGSL--------TKLEFLNLSTNRFSSLIPESLG--NLLKLHY 270 (667)
Q Consensus 202 ~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~ 270 (667)
++|.+.. +|.. +..+++|+.|+|++|.+. .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 681 s~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~ 757 (876)
T 4ecn_A 681 SYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSN 757 (876)
T ss_dssp CSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCE
T ss_pred cCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCE
Confidence 6655552 3332 235555555555555554 333322221 15555555555555 2344444 5555555
Q ss_pred ecCCCccCccccchhhhcCCCCCEEECcC------CCCCCcCcccccCCcccc
Q 042735 271 LDLSKYQFIQELPKELGKLVQLSELELSH------NFLGREIPSQICSMECCE 317 (667)
Q Consensus 271 L~ls~n~~~~~~p~~l~~l~~L~~L~l~~------n~l~~~ip~~~~~~~~~~ 317 (667)
|+|++|++.+ +|..++.+++|+.|++++ |.+.+.+|..+..+..+.
T Consensus 758 L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~ 809 (876)
T 4ecn_A 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLI 809 (876)
T ss_dssp EECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCC
T ss_pred EEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCC
Confidence 5555555444 455555555555555543 445555555554444443
No 42
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-35 Score=303.10 Aligned_cols=233 Identities=21% Similarity=0.330 Sum_probs=171.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|+..+++.+|||++...... ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED--EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc--chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 678889999999999999999988999999998653221 223457889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
||+++ +|.+.+.... ...|.||||+|||++.++.+||+|||+++.........+
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 177 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT 177 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc
Confidence 99995 7766654321 112349999999999999999999999987654444445
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC----------
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP---------- 618 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 618 (667)
...||+.|+||| |+.++||||+||++|||+||+.||............. .......+.
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-----SILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH-----HHHCCCCTTTSGGGTTSHH
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-----HHHCCCChHHhhhhhccch
Confidence 568999999999 4678999999999999999999986432211000000 000000000
Q ss_pred ----------CCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 619 ----------PSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 619 ----------~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+. ......++.+++.+||+.||++|||++|++++.||....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 0000 000113567888999999999999999999999987543
No 43
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.9e-36 Score=315.41 Aligned_cols=237 Identities=23% Similarity=0.336 Sum_probs=177.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||+||+|+.. +++.+|||++.+..... ....+.+.+|..++.++ +|||||++++++.+.+..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 468999999999999999999875 47789999986532211 12234578899999887 7999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+||||+++|+|..++.... ...|.||||+|||+|.++.+||+|||+|+........
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 9999999999988775421 1224599999999999999999999999864444444
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC-Chhhhhhhhcccc--CCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP-SPSVINMRLDEML--DPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~ 624 (667)
....+||+.|+||| |+.++|||||||++|||+||+.||........ ...........+. ...+|...+
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s--- 286 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS--- 286 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSC---
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCC---
Confidence 56689999999999 67899999999999999999999863221100 0000000011111 122222221
Q ss_pred HHHHHHHHHHHhccccCCCCCCCH------HHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTM------QTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~------~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++||++ +||+++.||..+.|+
T Consensus 287 ---~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~ 328 (396)
T 4dc2_A 287 ---VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 328 (396)
T ss_dssp ---HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHH
T ss_pred ---HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHH
Confidence 245678889999999999984 899999999877654
No 44
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=313.07 Aligned_cols=232 Identities=21% Similarity=0.312 Sum_probs=173.3
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|++++..+ +|||||++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 3578999999999999999999864 578999998864211 1112345688999999988 699999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+||||+++|+|..++.... ...|.||||+|||++.++.+||+|||+|+.......
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999999988775321 123459999999999999999999999986544444
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||..... .......... ....+...+
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~~~~i~~~--~~~~p~~~~----- 248 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE----DDLFEAILND--EVVYPTWLH----- 248 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC-----
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH----HHHHHHHHcC--CCCCCCCCC-----
Confidence 455678999999999 78999999999999999999999863321 1111111111 112222111
Q ss_pred HHHHHHHHHhccccCCCCCCCH------HHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPTM------QTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~------~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.+|++||++ +||++|.||....|.
T Consensus 249 -~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~ 290 (353)
T 3txo_A 249 -EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA 290 (353)
T ss_dssp -HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHH
T ss_pred -HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHH
Confidence 245678889999999999999 999999999876654
No 45
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=299.88 Aligned_cols=228 Identities=24% Similarity=0.411 Sum_probs=172.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... ++..+|+|++... .....+.|.+|++++++++|||||++++++.+++..++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 57888899999999999999874 5788999987542 234567899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC-
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN- 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~- 553 (667)
|||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999988864211 123499999999999999999999999876432211
Q ss_pred -------------cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 554 -------------WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 554 -------------~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
....+||+.|+||| |+.++|||||||++|||++|..|+............ ......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~---~~~~~~~~ 242 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL---NVRGFLDR 242 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB---CHHHHHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh---hhhccccc
Confidence 12467999999999 678999999999999999999987532211110000 00111111
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+...+. .+.+++.+||+.||++|||++|+++.|......
T Consensus 243 ~~~~~~~~------~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 243 YCPPNCPP------SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp TCCTTCCT------THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 12222222 356788899999999999999999988765443
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.3e-34 Score=313.34 Aligned_cols=308 Identities=21% Similarity=0.180 Sum_probs=251.8
Q ss_pred cEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeC-CCCCcc-cccCEEEccc
Q 042735 6 RELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSI-PPSVGN-LMLTVLALEN 83 (667)
Q Consensus 6 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~-~~L~~L~L~~ 83 (667)
+.++.+++.++.+ |. + .++|++|+|++|+|++..|..|.++++|++|+|++|.+.+.+ |..+.. .+|++|+|++
T Consensus 13 ~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4678888888764 54 3 389999999999999988999999999999999999997655 455666 5699999999
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCcc--CCCCCCCcEEEccCCccccccchh-hhcCCCCCEEECcCCccCC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKC--LRNCPNLVRISLEGNNMRGTISEA-FGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~--l~~l~~L~~L~L~~n~~~~~~~~~-~~~l~~L~~L~L~~n~l~~ 160 (667)
|.+++..|..+.++.+|+.|++++|.+++..|.. +.++++|++|+|++|.+++..|.. +..+++|++|++++|.+.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9999998999999999999999999999866555 999999999999999999887766 8999999999999999988
Q ss_pred ccCccCCCC----------------------------------CCCCEEEccCCcCCCCcCccccC--------------
Q 042735 161 EIASNWGKC----------------------------------PKLSTLNVSMNNITRSIPLEIGN-------------- 192 (667)
Q Consensus 161 ~~~~~~~~l----------------------------------~~L~~L~L~~n~l~~~~p~~~~~-------------- 192 (667)
..+..+..+ ++|+.|++++|.+.+..|..+..
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~ 248 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSN 248 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTT
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecc
Confidence 877766544 56778888888776544433221
Q ss_pred -------------------------CCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCee
Q 042735 193 -------------------------LSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFL 247 (667)
Q Consensus 193 -------------------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 247 (667)
.++|+.|++++|.+.+..|..|+.+++|+.|++++|.+.+..|..|+++++|++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 328 (455)
T 3v47_A 249 SYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKL 328 (455)
T ss_dssp CTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEE
Confidence 2567888888888887778888888888888888888887777788888888888
Q ss_pred eccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccc
Q 042735 248 NLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCE 317 (667)
Q Consensus 248 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~ 317 (667)
+|++|.+++..|..+.++++|+.|++++|++.+..|..+..+++|++|++++|.+.+..+..+..++.+.
T Consensus 329 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 398 (455)
T 3v47_A 329 NLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398 (455)
T ss_dssp ECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred ECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCccc
Confidence 8888888877788888888888888888888777788888888888888888888654444444444443
No 47
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=319.14 Aligned_cols=307 Identities=20% Similarity=0.221 Sum_probs=213.7
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|+|++|.++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. ...+|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH-PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC-CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc-ccCCccEEecc
Confidence 47899999999999888888999999999999999999888899999999999999999998 46665 55679999999
Q ss_pred cccccc-cCCccccCCCCccEEEeeCcccccccCccCCCCCCC--cEEEccCCcc--ccccchhhhcC------------
Q 042735 83 NNHFTG-NLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNL--VRISLEGNNM--RGTISEAFGIY------------ 145 (667)
Q Consensus 83 ~n~l~~-~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L--~~L~L~~n~~--~~~~~~~~~~l------------ 145 (667)
+|.+++ .+|..+..+.+|+.|++++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n 175 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTN 175 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSS
T ss_pred CCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccC
Confidence 999987 467889999999999999988875 345556666 7777777766 44444444332
Q ss_pred -----------------------------------------------------------------------CCCCEEECc
Q 042735 146 -----------------------------------------------------------------------LNLTFLDIS 154 (667)
Q Consensus 146 -----------------------------------------------------------------------~~L~~L~L~ 154 (667)
++|++|+++
T Consensus 176 ~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 255 (520)
T 2z7x_B 176 KEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSIS 255 (520)
T ss_dssp SCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEE
T ss_pred cchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEee
Confidence 267777777
Q ss_pred CCccCCccCccC-----CCCCCCCEEEccCCcCCCCcC-c------------------------c-ccCCCCcCeeeccC
Q 042735 155 DNNFFGEIASNW-----GKCPKLSTLNVSMNNITRSIP-L------------------------E-IGNLSTLNEFDLSL 203 (667)
Q Consensus 155 ~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~p-~------------------------~-~~~l~~L~~L~L~~ 203 (667)
+|.+.+.+|..+ ..+++|+.+++++|.+ .+| . . +..+++|++|++++
T Consensus 256 ~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 256 NVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSN 333 (520)
T ss_dssp EEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCS
T ss_pred cccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeEC
Confidence 777777777766 4554444444444443 122 0 0 14566677777777
Q ss_pred CcccccCCccccCCcccceeecccccccc--cCcccccCCCCCCeeeccCCcCCccchh-hhhcccCCCeecCCCccCcc
Q 042735 204 NHIVGKIPKEFGKLNSLTKLILRGNQLIG--HLPSEIGSLTKLEFLNLSTNRFSSLIPE-SLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 204 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~n~~~~ 280 (667)
|.+.+..|..++.+++|+.|++++|++.+ .+|..++.+++|++|++++|.+++.+|. .+..+++|+.|++++|++.+
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 77766666666777777777777776664 3445566677777777777777663443 35566666777777666666
Q ss_pred ccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 281 ELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 281 ~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
.+|..+. ++|+.|++++|.+. .+|..+..+..+..+
T Consensus 414 ~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L 449 (520)
T 2z7x_B 414 TIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQEL 449 (520)
T ss_dssp GGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred chhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEE
Confidence 5555443 56666666666665 566555554444433
No 48
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2e-35 Score=306.88 Aligned_cols=231 Identities=21% Similarity=0.313 Sum_probs=166.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.++|+..+.||+|+||.||+|+. .+++.+|+|++..............+.+|++++++++|||||++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36788999999999999999986 46889999998764322222334568899999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++......
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 999999999999988775321 12245999999999999999999999998654433
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......+||+.|+||| |+.++|||||||++|||++|+.||..... .......... ...++...+
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~--~~~~p~~~~---- 245 (327)
T 3a62_A 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR----KKTIDKILKC--KLNLPPYLT---- 245 (327)
T ss_dssp ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHT--CCCCCTTSC----
T ss_pred ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhC--CCCCCCCCC----
Confidence 3345578999999999 57789999999999999999999863221 1111111111 112222221
Q ss_pred HHHHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
..+.+++.+||+.+|++|| +++|+++|.||....|
T Consensus 246 --~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~ 285 (327)
T 3a62_A 246 --QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW 285 (327)
T ss_dssp --HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred --HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence 2456788899999999999 8999999999976544
No 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.1e-35 Score=310.08 Aligned_cols=231 Identities=18% Similarity=0.225 Sum_probs=175.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch--HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ--IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
+.|+..+.||+|+||.||+|+.. ++..+|||.+........ ....+.+.+|+.++++++|||||++++++.+....+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 56888999999999999999875 588899998865432111 112457899999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC----ceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH----KAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~----~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+++..... ..|.||||+|||++.++ .+||+|||+++....
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 99999999999998864321 12349999999998777 799999999987654
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. .....+||+.|+||| |+.++|||||||++|||++|+.||..... .... ..+.......+....
T Consensus 172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~----~~~~----~~i~~~~~~~~~~~~ 242 (361)
T 2yab_A 172 GV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETL----ANITAVSYDFDEEFF 242 (361)
T ss_dssp TC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHH----HHHHTTCCCCCHHHH
T ss_pred CC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHHH----HHHHhcCCCCCchhc
Confidence 32 234578999999999 67889999999999999999999853221 0111 111111111111101
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......+.+++.+||..||++|||++|++++.|+...
T Consensus 243 ~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 1112346688889999999999999999999998643
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=8.1e-35 Score=307.40 Aligned_cols=227 Identities=24% Similarity=0.382 Sum_probs=173.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC--------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+++++++ +|||||++++++.
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 67888999999999999999752 34569999986532 234456799999999999 8999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeec
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLD 531 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld 531 (667)
+.+..|+||||+++|+|.+++..... ..|.||||+|||++
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC
Confidence 99999999999999999998864320 11339999999999
Q ss_pred CCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||..... ..
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~----~~ 313 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----EE 313 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GG
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH----HH
Confidence 999999999999986654322 223456789999999 6789999999999999999 9999864321 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
... .+.....+..+... ...+.+++.+||+.+|++|||+.|++++|......
T Consensus 314 ~~~-~~~~~~~~~~~~~~------~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 314 LFK-LLKEGHRMDKPANC------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHH-HHHTTCCCCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HHhcCCCCCCCCCC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111 11111112222211 12466788899999999999999999999876543
No 51
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.4e-35 Score=307.70 Aligned_cols=229 Identities=21% Similarity=0.294 Sum_probs=175.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... ++..+|||++...... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 467899999999999999999864 5789999998654332 2345678999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCC---CceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLE---HKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~---~~~kl~DFGla~~~~~~~ 551 (667)
||||+++|+|.+.+.... ...|.||||+|||++.+ +.+||+|||+++......
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 999999999988775432 12245999999999865 459999999998765332
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||..... ...... +.......+.+....
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~----~~~~~~----i~~~~~~~~~~~~~~ 256 (362)
T 2bdw_A 186 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQ----IKAGAYDYPSPEWDT 256 (362)
T ss_dssp -SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHH----HHHTCCCCCTTGGGG
T ss_pred -ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHH----HHhCCCCCCcccccC
Confidence 334578999999999 67899999999999999999999853221 111111 111111111111112
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.||++|||+.|++++.|+..
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 290 (362)
T 2bdw_A 257 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290 (362)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence 2335678888999999999999999999998864
No 52
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=301.20 Aligned_cols=229 Identities=24% Similarity=0.407 Sum_probs=171.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|...+.||+|+||.||+|+.. .+..||||++..... ....+.|.+|++++++++|||||++++++.+.+..
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT---ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 56788899999999999999874 344599999875422 33456799999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 999999999999998854311 1134999999999999999999999998765432
Q ss_pred CC---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. .....||+.|+||| |+.++|||||||++|||+| |+.||..... ..... ..........+...
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~- 279 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVIS-SVEEGYRLPAPMGC- 279 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH----HHHHH-HHHTTCCCCCCTTC-
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH----HHHHH-HHHcCCCCCCCCCc-
Confidence 21 22345678899999 5779999999999999999 9999753221 11111 11111111112111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
...+.+++.+||+.||++|||+.||++.|.......+
T Consensus 280 -----~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 280 -----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 2246678889999999999999999999988765544
No 53
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-35 Score=304.84 Aligned_cols=226 Identities=21% Similarity=0.287 Sum_probs=174.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... ++..+|+|.+... ......+.+|++++++++|||||++++++.+.+..++|
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 57888999999999999999865 5788999987642 12345688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecC--CCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDL--EHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~--~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+..... ..|.||||+|||++. ++.+||+|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 999999999998865321 113499999999997 7899999999998765432
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......||+.|+||| |+.++|||||||++|||+||+.||..... .... ..+.......+.......
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~----~~i~~~~~~~~~~~~~~~ 230 (321)
T 1tki_A 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----QQII----ENIMNAEYTFDEEAFKEI 230 (321)
T ss_dssp EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH----HHHHHTCCCCCHHHHTTS
T ss_pred ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH----HHHH----HHHHcCCCCCChhhhccC
Confidence 234567999999999 47789999999999999999999853221 1111 111111111111111112
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..++.+++.+||+.||++|||+.|++++.|+...
T Consensus 231 s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 2356788899999999999999999999998653
No 54
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-35 Score=309.26 Aligned_cols=228 Identities=20% Similarity=0.297 Sum_probs=173.1
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.. .+++.||||++..... ......+.+.+|+++++.++|||||++++++.+.+..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 46788999999999999999986 5678999998753211 001113468899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+ +|+|.+.+.... ...|.||||+|||++.++.+||+|||+++...... ..
T Consensus 87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-~~ 164 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FL 164 (336)
T ss_dssp EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-TT
T ss_pred EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-cc
Confidence 99999 688887764321 11244999999999999999999999998765432 23
Q ss_pred ccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC--CCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD--PRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 625 (667)
...+||+.|+|||. +.++|||||||++|||+||+.||........ ...+.. ...+...+
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------~~~i~~~~~~~p~~~s---- 232 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------FKKVNSCVYVMPDFLS---- 232 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------BCCCCSSCCCCCTTSC----
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------HHHHHcCCCCCcccCC----
Confidence 45689999999992 4579999999999999999999863221100 001111 11121111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhcc
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSY 664 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~ 664 (667)
..+.+++.+||+.||.+|||++|++++.||.....++
T Consensus 233 --~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~~ 269 (336)
T 3h4j_B 233 --PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDY 269 (336)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCCGG
T ss_pred --HHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCccc
Confidence 2456788899999999999999999999998654443
No 55
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.4e-34 Score=317.62 Aligned_cols=298 Identities=23% Similarity=0.212 Sum_probs=218.9
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|+|++|.|+++.|..|.++++|++|+|++|+|++..|+.|.++++|++|+|++|+++ .+|.. ...+|+.|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC-PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC-CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc-ccccCCEEECC
Confidence 57899999999999888888999999999999999999888899999999999999999998 56665 45679999999
Q ss_pred cccccc-cCCccccCCCCccEEEeeCcccccccCccCCCCCCC--cEEEccCCcc--ccccchhhhcCC-----------
Q 042735 83 NNHFTG-NLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNL--VRISLEGNNM--RGTISEAFGIYL----------- 146 (667)
Q Consensus 83 ~n~l~~-~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L--~~L~L~~n~~--~~~~~~~~~~l~----------- 146 (667)
+|.+++ .+|..+.++++|+.|++++|.+++. .+..+++| +.|+|++|.+ ++..+..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n 206 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPN 206 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSS
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCc
Confidence 999987 3467888999999999999988753 34445555 8888888877 554444443322
Q ss_pred ----------------------------------------------------------------------CCCEEECcCC
Q 042735 147 ----------------------------------------------------------------------NLTFLDISDN 156 (667)
Q Consensus 147 ----------------------------------------------------------------------~L~~L~L~~n 156 (667)
+|++|++++|
T Consensus 207 ~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 286 (562)
T 3a79_B 207 SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNL 286 (562)
T ss_dssp SCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEE
T ss_pred cchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEecc
Confidence 6777777778
Q ss_pred ccCCccCccC-----------------------------------------------------CCCCCCCEEEccCCcCC
Q 042735 157 NFFGEIASNW-----------------------------------------------------GKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 157 ~l~~~~~~~~-----------------------------------------------------~~l~~L~~L~L~~n~l~ 183 (667)
.+.+.+|..+ ..+++|++|++++|.++
T Consensus 287 ~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 287 TITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp EECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC
T ss_pred EeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccc
Confidence 7777777654 55667777777777777
Q ss_pred CCcCccccCCCCcCeeeccCCccccc--CCccccCCcccceeecccccccccCcc-cccCCCCCCeeeccCCcCCccchh
Q 042735 184 RSIPLEIGNLSTLNEFDLSLNHIVGK--IPKEFGKLNSLTKLILRGNQLIGHLPS-EIGSLTKLEFLNLSTNRFSSLIPE 260 (667)
Q Consensus 184 ~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 260 (667)
+..|..+.++++|++|+|++|.+.+. +|..|+.+++|+.|++++|.+.+.+|. .+..+++|++|++++|++++..|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 66666777777777777777776652 234566777777777777777663443 466677777777777777665554
Q ss_pred hhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCccc
Q 042735 261 SLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQ 309 (667)
Q Consensus 261 ~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~ 309 (667)
.+. ++|+.|++++|++. .+|..+..+++|++|++++|.++ .+|..
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 491 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDG 491 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTT
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHH
Confidence 443 56777777777654 56666667777777777777775 45544
No 56
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.2e-35 Score=307.16 Aligned_cols=237 Identities=23% Similarity=0.331 Sum_probs=178.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|+.. +++.+|+|++...... .....+.+.+|+.++.++ +|||||++++++.+.+..+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 367899999999999999999875 5788999998654322 223456788999999988 8999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+||||+++|+|.+++.... ...|.||||+|||++.++++||+|||+++........
T Consensus 87 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 9999999999988775321 1224599999999999999999999999865433344
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-hhhhhhhhcccc--CCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-PSVINMRLDEML--DPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 624 (667)
....+||+.|+||| |+.++|||||||++|||+||+.||......... ..........+. ...++...+
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s--- 243 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS--- 243 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSC---
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCC---
Confidence 55678999999999 678899999999999999999998632111000 000000001111 122222211
Q ss_pred HHHHHHHHHHHhccccCCCCCCCH------HHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTM------QTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~------~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++||++ +|+++|.||....|+
T Consensus 244 ---~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~ 285 (345)
T 3a8x_A 244 ---VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 285 (345)
T ss_dssp ---HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHH
T ss_pred ---HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHH
Confidence 245678889999999999995 899999999876654
No 57
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=299.93 Aligned_cols=229 Identities=23% Similarity=0.333 Sum_probs=166.6
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCch----------------------HHhHHHHHHHHHHHH
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQ----------------------IADQKEFFAEIEALT 476 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~ 476 (667)
.++|...+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36788999999999999999986 4578899998865321110 112346899999999
Q ss_pred hcCCCCeeEEEEEEEe--CCceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeec
Q 042735 477 KIRHRNIVKFYGFCSH--ARHSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLD 531 (667)
Q Consensus 477 ~l~H~niv~~~g~~~~--~~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld 531 (667)
+++|||||++++++.+ .+..++||||+++|+|.+.+.... ...|.||||+|||++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 9999999999999987 567899999999999876543221 122459999999999
Q ss_pred CCCceEEecccccccccCCCCCcccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++.............||+.|+|||. +.++|||||||++|||+||+.||...... .
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~ 247 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM----C 247 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH----H
T ss_pred CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH----H
Confidence 9999999999999876654443455689999999993 34579999999999999999998532210 1
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.......... ..+.. +.. ...+.+++.+||+.||++|||++|++++.|+.
T Consensus 248 ~~~~~~~~~~--~~~~~-~~~---~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 248 LHSKIKSQAL--EFPDQ-PDI---AEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHCCC--CCCSS-SCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHhcccC--CCCCc-ccc---CHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 1111111111 11111 111 12466788899999999999999999999874
No 58
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2e-34 Score=331.95 Aligned_cols=292 Identities=22% Similarity=0.278 Sum_probs=254.4
Q ss_pred CCccccCCCCCCEEEccCccccc-----------------cCCcccc--CCCCCCeeeccccccceeCCCCCcc-cccCE
Q 042735 19 IPTETWNLKSLVKLGLGGNQFRG-----------------SLPSSVG--NLSSLRYLFLFENNLSGSIPPSVGN-LMLTV 78 (667)
Q Consensus 19 ~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~ 78 (667)
+|..|.++++|++|+|++|+|++ .+|..++ ++++|++|+|++|++.+.+|..++. .+|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78889999999999999999998 3899988 9999999999999999999998887 46999
Q ss_pred EEccccc-ccc-cCCccccCCC-------CccEEEeeCcccccccCc--cCCCCCCCcEEEccCCccccccchhhhcCCC
Q 042735 79 LALENNH-FTG-NLRHNICRNG-------ALERVIVGGNHFRGPIPK--CLRNCPNLVRISLEGNNMRGTISEAFGIYLN 147 (667)
Q Consensus 79 L~L~~n~-l~~-~~~~~~~~~~-------~L~~L~l~~n~~~~~~p~--~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 147 (667)
|+|++|+ +++ .+|..+..+. +|+.|++++|+++ .+|. .+.++++|+.|+|++|.++ .+| .|+.+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 988 7887666554 9999999999999 7888 8999999999999999998 677 8999999
Q ss_pred CCEEECcCCccCCccCccCCCCCC-CCEEEccCCcCCCCcCccccCCCC--cCeeeccCCcccccCCcc---cc--CCcc
Q 042735 148 LTFLDISDNNFFGEIASNWGKCPK-LSTLNVSMNNITRSIPLEIGNLST--LNEFDLSLNHIVGKIPKE---FG--KLNS 219 (667)
Q Consensus 148 L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~---~~--~l~~ 219 (667)
|+.|+|++|.+. .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+|++|.+.+.+|.. +. .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999998 88989999999 999999999998 67887877754 999999999998876632 22 3458
Q ss_pred cceeecccccccccCccc-ccCCCCCCeeeccCCcCCccchhhhhc--------ccCCCeecCCCccCccccchhhh--c
Q 042735 220 LTKLILRGNQLIGHLPSE-IGSLTKLEFLNLSTNRFSSLIPESLGN--------LLKLHYLDLSKYQFIQELPKELG--K 288 (667)
Q Consensus 220 L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~ls~n~~~~~~p~~l~--~ 288 (667)
|+.|+|++|.+. .+|.. +..+++|+.|+|++|+++. +|..+.. +++|+.|+|++|++. .+|..+. .
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS-IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC-CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc-cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 999999999998 45555 4589999999999999985 4554433 339999999999977 7899887 9
Q ss_pred CCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 289 LVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 289 l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
+++|+.|+|++|.+.+ +|..+..+..+..+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L 781 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEE
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEE
Confidence 9999999999999987 89888877776655
No 59
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2e-36 Score=322.56 Aligned_cols=239 Identities=20% Similarity=0.311 Sum_probs=178.0
Q ss_pred HHHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 416 IIRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 416 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
+....++|+..+.||+|+||+||+|+.. +++.+|+|++..... ......+.+.+|+.+++.++|||||++++++.+.+
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 3334678999999999999999999875 478899998753110 00011234789999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
..|+||||+++|+|.+.+..... ..|.||||+|||+|.++.+||+|||+|+......
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 99999999999999988754321 1244999999999999999999999998765432
Q ss_pred C-CcccccccccccCCC----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 552 S-NWSALVGTYRYVAPD----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 552 ~-~~~~~~Gt~~y~aPE----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
. ...+.+||+.|+||| |+.++|||||||++|||+||+.||...... ...............+...
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~ 298 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMNHKNSLTFPDDN 298 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTHHHHCCCCTTC
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh----hHHHHHHhccccccCCCcc
Confidence 2 234678999999999 456899999999999999999998633211 1111111110011122111
Q ss_pred CchHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHHHHhhhhhc
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPES--RPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~--RPt~~ev~~~l~~~~~~~~ 663 (667)
.. ...+.+++.+||..+|.+ ||+++||++|.||..+.|.
T Consensus 299 -~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~ 339 (410)
T 3v8s_A 299 -DI---SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 339 (410)
T ss_dssp -CC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred -cc---cHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence 11 124567888999998988 9999999999999887665
No 60
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=309.87 Aligned_cols=310 Identities=21% Similarity=0.155 Sum_probs=279.7
Q ss_pred cEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccc
Q 042735 6 RELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENN 84 (667)
Q Consensus 6 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n 84 (667)
+.++.+++.++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..+.. .+|+.|+|++|
T Consensus 14 ~~v~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFVA-VPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCSS-CCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-CCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 578889999986 46654 368999999999999988999999999999999999999888988887 56999999999
Q ss_pred cccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCc
Q 042735 85 HFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIAS 164 (667)
Q Consensus 85 ~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 164 (667)
.++...+..+.++.+|+.|++++|.+.+..|..+.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99977777789999999999999999999999999999999999999999998899999999999999999999887777
Q ss_pred cCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCC
Q 042735 165 NWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKL 244 (667)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 244 (667)
.+..+++|+.|+|++|.+.+..+..|.++++|+.|++++|.+.+.+|..+....+|+.|++++|.+.+..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999998888899999999999999998887788777777799999999999986665789999999
Q ss_pred CeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCccccc
Q 042735 245 EFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEV 318 (667)
Q Consensus 245 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~ 318 (667)
+.|+|++|.+++..+..+.++++|+.|++++|++.+..|..|..+++|+.|++++|.+....+..+..+..+..
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 324 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLET 324 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCE
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCE
Confidence 99999999999988888999999999999999999988999999999999999999997655555555444433
No 61
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.9e-35 Score=310.14 Aligned_cols=231 Identities=18% Similarity=0.220 Sum_probs=172.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCC-CchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLP-SDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
++|+..+.||+|+||.||+|.. .+++.||||++..... .......+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 5688999999999999999986 4688999998743110 0001124578999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCCCc---eEEecccccccc
Q 042735 499 IYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLEHK---AHVSDFGIAKFL 547 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~~~---~kl~DFGla~~~ 547 (667)
||||+++|+|.+.+.... ...|.||||+|||++.++. +||+|||+++..
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999999977654211 1123499999999986655 999999999877
Q ss_pred cCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 548 KPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 548 ~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
..........+||+.|+||| |+.++|||||||++|||+||+.||..... .... .+..........
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~----~i~~~~~~~~~~ 254 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFE----GIIKGKYKMNPR 254 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----HHHH----HHHHTCCCCCHH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----HHHH----HHHcCCCCCCcc
Confidence 65444345568999999999 67899999999999999999999853211 1111 111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
........+.+++.+||+.||++|||+.|++++.|+...
T Consensus 255 ~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 111112356788889999999999999999999998653
No 62
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.3e-35 Score=304.33 Aligned_cols=225 Identities=20% Similarity=0.376 Sum_probs=169.7
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc--
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH-- 495 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~-- 495 (667)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++|||||++++++.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST---TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 3578999999999999999999875 688999999864322 2234679999999999999999999999866542
Q ss_pred -------------------------------------------------------eEEEEEecCCCChHHHhccccC---
Q 042735 496 -------------------------------------------------------SILIYEYLKRGSLATNLSNDAA--- 517 (667)
Q Consensus 496 -------------------------------------------------------~~lv~ey~~~g~L~~~l~~~~~--- 517 (667)
.++||||+++|+|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 7999999999999988764321
Q ss_pred ------------------------CcccccccCCeeecCCCceEEecccccccccCCC------------CCcccccccc
Q 042735 518 ------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS------------SNWSALVGTY 561 (667)
Q Consensus 518 ------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~------------~~~~~~~Gt~ 561 (667)
..|.||||+||+++.++.+||+|||+++...... ......+||+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 1234999999999999999999999998765432 1223457999
Q ss_pred cccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHH
Q 042735 562 RYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAF 635 (667)
Q Consensus 562 ~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (667)
.|+||| |+.++|||||||++|||+||..|+... ............+ .........+.+++.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITDVRNLKFP---LLFTQKYPQEHMMVQ 307 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHHHHTTCCC---HHHHHHCHHHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHHhhccCCC---cccccCChhHHHHHH
Confidence 999999 678999999999999999998763210 0001111111111 111222345678889
Q ss_pred hccccCCCCCCCHHHHHHHHHHhh
Q 042735 636 SCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 636 ~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+||+.||++|||++|++++.||..
T Consensus 308 ~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHccCCCCcCCCHHHHhhchhhhc
Confidence 999999999999999999988753
No 63
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.9e-35 Score=297.85 Aligned_cols=236 Identities=23% Similarity=0.317 Sum_probs=168.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|+..+++.+|||++..... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57888999999999999999988899999999865432 1122356889999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||+++.........+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp ECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred EecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 99985 8877664321 112449999999999999999999999987654333344
Q ss_pred cccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh------------hhhccccCCCC
Q 042735 556 ALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN------------MRLDEMLDPRL 616 (667)
Q Consensus 556 ~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 616 (667)
...||+.|+||| |+.++|||||||++|||+||+.||.............. .......++..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 567999999998 56789999999999999999999863321100000000 00000011111
Q ss_pred CCCC----Cc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 617 PPPS----PD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 617 ~~~~----~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.... .. .......+.+++.+||+.||++|||++|++++.||..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 1000 00 0011234668888999999999999999999998864
No 64
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-35 Score=303.11 Aligned_cols=230 Identities=18% Similarity=0.275 Sum_probs=173.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCc--hHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSD--QIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
+.|+..+.||+|+||.||+|... ++..+|||.+....... .....+.+.+|++++++++|||||++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999874 57889999886533211 1113467899999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC----ceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH----KAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~----~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+++..... ..|.||||+||+++.++ .+||+|||+++....
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 170 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170 (326)
T ss_dssp EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence 99999999999998864321 12349999999999887 899999999987654
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. ......||+.|+||| |+.++|||||||++|||+||+.||..... ..... .... .....+ ....
T Consensus 171 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~-~~~~-~~~~~~--~~~~ 241 (326)
T 2y0a_A 171 GN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETLA-NVSA-VNYEFE--DEYF 241 (326)
T ss_dssp TS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHH-HHHH-TCCCCC--HHHH
T ss_pred CC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHHH-HHHh-cCCCcC--cccc
Confidence 32 234568999999999 57789999999999999999999853221 00110 0000 011111 0000
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
......+.+++.+||+.||++|||++|++++.|+..
T Consensus 242 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 277 (326)
T 2y0a_A 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277 (326)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence 111234667888999999999999999999998864
No 65
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2e-35 Score=308.25 Aligned_cols=232 Identities=23% Similarity=0.344 Sum_probs=178.0
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
..++|...+.||+|+||.||+|+.. +++.||||++...... .....+.+.+|.+++.++ +|||||++++++.+.+..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 4678999999999999999999875 5788999988542100 011235678899999887 899999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999999988875421 122459999999999999999999999986544444
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||..... ......... ..+..+...+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~--~~~~~p~~~s----- 242 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRM--DNPFYPRWLE----- 242 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHH--CCCCCCTTSC-----
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHHh--CCCCCCcccC-----
Confidence 455678999999999 67889999999999999999999863221 111111111 1222222221
Q ss_pred HHHHHHHHHhccccCCCCCCCHH-HHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQ-TITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~-ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++||++. ||+++.||....|+
T Consensus 243 -~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w~ 279 (345)
T 1xjd_A 243 -KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279 (345)
T ss_dssp -HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHH
T ss_pred -HHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCHH
Confidence 2456788899999999999998 99999999876654
No 66
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.7e-35 Score=309.15 Aligned_cols=233 Identities=21% Similarity=0.374 Sum_probs=177.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.+|+|++..... ......+.+.+|++++++++|||||++++++.+.+..++
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 367899999999999999999864 578899998753211 011224578899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|..++..... ..|.||||+|||++.++.+||+|||+++..... ...
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~ 171 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQI 171 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-CCB
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-Cce
Confidence 9999999999988764321 124499999999999999999999999876543 234
Q ss_pred ccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
...+||+.|+||| |+.++|||||||++|||+||+.||....... ........ .......+...+
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~--~~~~~~~p~~~s---- 244 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVHTF--ETTVVTYPSAWS---- 244 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHHHH--HHCCCCCCTTSC----
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHHHH--hhcccCCCCcCC----
Confidence 5678999999999 3568999999999999999999986332211 01111110 011112222221
Q ss_pred HHHHHHHHHHhccccCCCCCCC-HHHHHHHHHHhhhhhc
Q 042735 626 KLISIMEVAFSCLDVSPESRPT-MQTITQQLLFSLVYFS 663 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt-~~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.+|++||+ +++|.++.||....|+
T Consensus 245 --~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~ 281 (384)
T 4fr4_A 245 --QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWD 281 (384)
T ss_dssp --HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHH
T ss_pred --HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHH
Confidence 24667888999999999998 9999999999876654
No 67
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=8.8e-36 Score=320.00 Aligned_cols=244 Identities=22% Similarity=0.275 Sum_probs=179.8
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCS 491 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~ 491 (667)
+.++....++|+..+.||+|+||+||+|+... ++.+|||++.+... ......+.+.+|+.++.+++|||||+++++|.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34444456899999999999999999998755 67899998753110 00011224889999999999999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhccc--cC-----------------------CcccccccCCeeecCCCceEEeccccccc
Q 042735 492 HARHSILIYEYLKRGSLATNLSND--AA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~--~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+.+..++|||||++|+|.+++... .. ..|.||||+|||+|.++.+||+|||+|+.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 999999999999999999988652 11 11349999999999999999999999987
Q ss_pred ccCCCC-CcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 547 LKPDSS-NWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 547 ~~~~~~-~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
...... ..+..+||+.||||| |+.++|||||||++|||+||+.||...... .............
T Consensus 225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHKERF 300 (437)
T ss_dssp CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTHHHHC
T ss_pred cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh----HHHHhhhhccccc
Confidence 654332 234468999999999 356899999999999999999998643211 1111111100011
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHHHHhhhhhcc
Q 042735 615 RLPPPSPDVQGKLISIMEVAFSCLDVSPES--RPTMQTITQQLLFSLVYFSY 664 (667)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~--RPt~~ev~~~l~~~~~~~~~ 664 (667)
..|....... ..+.+++.+|+..+|++ ||+++|++++.||..+.|+.
T Consensus 301 ~~p~~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~ 349 (437)
T 4aw2_A 301 QFPTQVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN 349 (437)
T ss_dssp CCCSSCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred cCCcccccCC---HHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence 2222111111 24567788999888887 99999999999999877653
No 68
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-34 Score=295.81 Aligned_cols=229 Identities=29% Similarity=0.401 Sum_probs=165.7
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh--cCCCCeeEEEEEEEeC----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK--IRHRNIVKFYGFCSHA----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~g~~~~~----~ 494 (667)
++|+..+.||+|+||.||+|+. +++.||||++.. ...+.+.+|.+++.. ++||||+++++++.+. .
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc-------ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 5788999999999999999988 678899999753 123456777777766 7999999999997653 4
Q ss_pred ceEEEEEecCCCChHHHhcccc-------------------------------CCcccccccCCeeecCCCceEEecccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-------------------------------AAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
..++||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred eeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 5889999999999988764321 123559999999999999999999999
Q ss_pred cccccCCCCC----cccccccccccCCCC------------CCCchHHHHHHHHHHHHhC----------CCCCCCCccC
Q 042735 544 AKFLKPDSSN----WSALVGTYRYVAPDY------------RKKCDVYSFRVLALEVIKG----------KHPRGFVSSI 597 (667)
Q Consensus 544 a~~~~~~~~~----~~~~~Gt~~y~aPE~------------~~~~DV~sfGvvl~ElltG----------~~p~~~~~~~ 597 (667)
++........ .....||+.|+|||. +.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 9876543321 233579999999992 1478999999999999999 6666432211
Q ss_pred CCChhhhhh-hhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 598 LPSPSVINM-RLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 598 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
......... .......+..+.. .........+.+++.+||+.||++|||++||++.|...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNR-WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChh-hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111111 1111111222111 01123445688899999999999999999999998753
No 69
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.5e-35 Score=307.92 Aligned_cols=226 Identities=24% Similarity=0.392 Sum_probs=171.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... ++..||||.+..... ....+.|.+|++++++++|||||+++|++.+.+..++|
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP---PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC---HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC---HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 57888899999999999999885 688899999865321 23345689999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 99999999998875421 112349999999999999999999999986443211
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......+|+.|+||| |+.++|||||||++|||+| |+.||..... ..... ..........+...+
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~~---- 341 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN----QQTRE-FVEKGGRLPCPELCP---- 341 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH----HHHHH-HHHTTCCCCCCTTCC----
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHcCCCCCCCCCCC----
Confidence 111234678899999 5779999999999999999 9999764321 11111 111111111121111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.||++|||+++|++.|.....
T Consensus 342 --~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 342 --DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp --HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 246678889999999999999999999887543
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.1e-34 Score=304.45 Aligned_cols=226 Identities=22% Similarity=0.415 Sum_probs=160.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|+.. .+..||||++.... .....+.|.+|++++++++|||||+++|++.+.+..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 57889999999999999999864 46679999986532 233456799999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999999998864321 1234999999999999999999999998765432
Q ss_pred CC---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. .....||+.|+||| |+.++|||||||++|||++ |+.||..... ...... +........+..
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~----~~~~~~-i~~~~~~~~~~~-- 274 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----QDVIKA-VDEGYRLPPPMD-- 274 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH----HHHHHH-HHTTEECCCCTT--
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHH-HHcCCCCCCCcc--
Confidence 21 12234578899999 6779999999999999998 9999753221 111111 111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+++.+||+.+|++||+|.||++.|.....
T Consensus 275 ----~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 275 ----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ----CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 12356788889999999999999999998876643
No 71
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.4e-35 Score=302.37 Aligned_cols=240 Identities=20% Similarity=0.351 Sum_probs=161.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... +++.||||++...... ...+.+.+|++++++++|||||++++++.+++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT---CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 467888999999999999999864 5788999988643221 123468899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
||||++ |+|.+.+.... ...|.||||+|||++.++.+||+|||+++...
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 999999 58887764321 01134999999999999999999999998765
Q ss_pred CCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhc--
Q 042735 549 PDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLD-- 609 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~-- 609 (667)
..........||+.|+||| |+.++|||||||++|||+||+.||...........+... ...
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 4433445568999999999 467899999999999999999998632211000000000 000
Q ss_pred cccCCCCCCCCC-chH---------HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 610 EMLDPRLPPPSP-DVQ---------GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 610 ~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
....+..+...+ ... .....+.+++.+||+.||++|||++|++++.||...+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 000011100000 000 011257788899999999999999999999999876654
No 72
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.7e-34 Score=294.62 Aligned_cols=232 Identities=22% Similarity=0.358 Sum_probs=168.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|.... .+|||+++.... .....+.|.+|++++++++|||||++++++. .+..++||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 578888999999999999998754 488888765332 2344567999999999999999999999875 45688999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC--CCC
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD--SSN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~--~~~ 553 (667)
||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++..... ...
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 9999999998875321 1123499999999999999999999999865421 122
Q ss_pred cccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.....||+.|+||| |+.++|||||||++|||+||+.||..... ..............+.+.......
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 266 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN---RDQIIFMVGRGYASPDLSKLYKNC- 266 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HHHHHHHHHHTCCCCCSTTSCSSS-
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc---HHHHHHHHhcCCCCcchhhhhcCC-
Confidence 34467999999999 34579999999999999999999863321 111111111112222222211111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
...+.+++.+||+.+|++|||+.||+++++.....+.
T Consensus 267 --~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 267 --PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp --CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred --cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 2246678889999999999999999999988766543
No 73
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5e-35 Score=302.12 Aligned_cols=228 Identities=22% Similarity=0.365 Sum_probs=176.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.+|+|++..... ......+.+.+|+.+++.++|||||++++++.+.+..++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 468899999999999999999874 688999998754211 011224568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++..... .
T Consensus 84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---~ 160 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---T 160 (318)
T ss_dssp EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---B
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc---c
Confidence 9999999999988754321 123499999999999999999999999875432 3
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...+||+.|+||| |+.++|||||||++|||+||+.||..... .......... ....+...+ .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~--~~~~p~~~~------~ 228 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT----MKTYEKILNA--ELRFPPFFN------E 228 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHHC--CCCCCTTSC------H
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhC--CCCCCCCCC------H
Confidence 3568999999999 67899999999999999999999853221 1111111111 122222221 2
Q ss_pred HHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
.+.+++.+||+.||++|| +++|+++|.||..+.|+
T Consensus 229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~ 268 (318)
T 1fot_A 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE 268 (318)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHH
Confidence 456788899999999999 99999999999876654
No 74
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5e-35 Score=303.28 Aligned_cols=229 Identities=24% Similarity=0.347 Sum_probs=172.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++|||||++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 468899999999999999999865 688899999864322 1223568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC--C
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--S 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--~ 552 (667)
||||+++|+|.+.+..... ..|.||||+|||++.++.+||+|||+++...... .
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999999888764321 1234999999999999999999999998654322 2
Q ss_pred CcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....+||+.|+|||. +.++|||||||++|||+||+.||....... ..... .... .....+. ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~-~~~~---~~~~~~~---~~ 233 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSD-WKEK---KTYLNPW---KK 233 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--HHHHH-HHTT---CTTSTTG---GG
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHH-Hhcc---cccCCcc---cc
Confidence 2345689999999992 457999999999999999999986433210 10110 0000 0111111 11
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+++.+||+.||++|||++|++++.|+...
T Consensus 234 ~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 234 IDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 12345678889999999999999999999998654
No 75
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.1e-35 Score=303.49 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=155.0
Q ss_pred cceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEEec
Q 042735 426 KYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
.+.||+|+||.||+|... +++.||||++.. .....+.+|++++.++. |||||++++++.+....++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-------RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-------GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-------hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 478999999999999874 578899999753 12456789999999998 999999999999999999999999
Q ss_pred CCCChHHHhccccC------------------------CcccccccCCeeecCCC---ceEEecccccccccCCCCCccc
Q 042735 504 KRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH---KAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 504 ~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~---~~kl~DFGla~~~~~~~~~~~~ 556 (667)
++|+|.+.+..... ..|.||||+|||++.++ .+||+|||+++...........
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 168 (325)
T 3kn6_A 89 NGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168 (325)
T ss_dssp CSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc
Confidence 99999988764321 12349999999998765 8999999999876655444556
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
.+||+.|+||| |+.++|||||||++|||+||+.||............. .....+.......+.+........+
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~ 247 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV-EIMKKIKKGDFSFEGEAWKNVSQEA 247 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH-HHHHHHTTTCCCCCSHHHHTSCHHH
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH-HHHHHHHcCCCCCCcccccCCCHHH
Confidence 78999999999 5678999999999999999999986432211111111 1111222222222222222223457
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+++.+||+.||++|||++|++++.|+...
T Consensus 248 ~~li~~~L~~dP~~Rpt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 248 KDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277 (325)
T ss_dssp HHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred HHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence 788899999999999999999999998643
No 76
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.4e-35 Score=304.38 Aligned_cols=236 Identities=22% Similarity=0.273 Sum_probs=172.9
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCC-CchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLP-SDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
+..++|...+.||+|+||.||+|.. .++..+|+|++..... .......+.+.+|++++++++|||||++++++.+.+.
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 102 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY 102 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence 3457899999999999999999986 4577899998753210 0011234679999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccc------------------------------------------------------------
Q 042735 496 SILIYEYLKRGSLATNLSND------------------------------------------------------------ 515 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~------------------------------------------------------------ 515 (667)
.++||||+++|+|.+.+...
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 99999999999999887410
Q ss_pred ----cCCcccccccCCeeecCCC--ceEEecccccccccCCCC----CcccccccccccCCC--------CCCCchHHHH
Q 042735 516 ----AAAEELDISSKNVLLDLEH--KAHVSDFGIAKFLKPDSS----NWSALVGTYRYVAPD--------YRKKCDVYSF 577 (667)
Q Consensus 516 ----~~~~~~dlk~~NiLld~~~--~~kl~DFGla~~~~~~~~----~~~~~~Gt~~y~aPE--------~~~~~DV~sf 577 (667)
....|.||||+||+++.++ .+||+|||+++....... ......||+.|+||| |+.++|||||
T Consensus 183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 0011339999999998776 899999999986543221 134567999999999 4568999999
Q ss_pred HHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 578 RVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 578 Gvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
||++|||+||+.||...... ... ..+.......+.+........+.+++.+||+.+|++|||+.|++++.|+
T Consensus 263 G~il~el~~g~~pf~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~ 334 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDA----DTI----SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHH----HHH----HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHH
T ss_pred HHHHHHHHHCCCCCCCCChH----HHH----HHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhh
Confidence 99999999999998633211 111 1111112211122211222356788889999999999999999999999
Q ss_pred hhhh
Q 042735 658 SLVY 661 (667)
Q Consensus 658 ~~~~ 661 (667)
....
T Consensus 335 ~~~~ 338 (345)
T 3hko_A 335 SQFS 338 (345)
T ss_dssp HTTS
T ss_pred ccCh
Confidence 7543
No 77
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=314.93 Aligned_cols=175 Identities=22% Similarity=0.250 Sum_probs=143.0
Q ss_pred cCCCCCEEECcCCccCCcc--CccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCC-ccccCCccc
Q 042735 144 IYLNLTFLDISDNNFFGEI--ASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIP-KEFGKLNSL 220 (667)
Q Consensus 144 ~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L 220 (667)
.+++|++|++++|.+.+.. +..+..+++|+.|++++|.+.+..+. +.++++|+.|++++|.+.+..+ ..+.++++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 4567788888888876543 66778889999999999988765444 8889999999999998887665 468888999
Q ss_pred ceeecccccccccCcccccCCCCCCeeeccCCcCC-ccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcC
Q 042735 221 TKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFS-SLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSH 299 (667)
Q Consensus 221 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~ 299 (667)
+.|++++|.+.+..|..+.++++|++|++++|.++ +.+|..+..+++|+.|++++|++.+..|..+..+++|++|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 99999999888888888888999999999999887 56788888889999999999988888888888899999999999
Q ss_pred CCCCCcCcccccCCcccccc
Q 042735 300 NFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 300 n~l~~~ip~~~~~~~~~~~~ 319 (667)
|.+.+..|..+..++.+..+
T Consensus 504 n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEE
T ss_pred CcCCCCCHHHhhcccCCcEE
Confidence 98887766666665555443
No 78
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=315.24 Aligned_cols=314 Identities=20% Similarity=0.213 Sum_probs=243.6
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
+++.|+|++|.++++.+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+.. .+|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 5777888888887777777778888888888888877766777778888888888888777666666665 457777777
Q ss_pred cccccccCCccccCCCCccEEEeeCccccc-ccCccCCCCCCCcEEEccCCccccccchhhhc-----------------
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRG-PIPKCLRNCPNLVRISLEGNNMRGTISEAFGI----------------- 144 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~----------------- 144 (667)
+|.+++..+..+..+.+|+.|++++|.+.+ .+|..+.++++|++|++++|.+++..+..++.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 777776555557777777777777777765 35777777777777777777665544333332
Q ss_pred --------------------------------------------------------------------------------
Q 042735 145 -------------------------------------------------------------------------------- 144 (667)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (667)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred ------------CCCCCEEECcCCccCCccCccC------------------------------------------CCCC
Q 042735 145 ------------YLNLTFLDISDNNFFGEIASNW------------------------------------------GKCP 170 (667)
Q Consensus 145 ------------l~~L~~L~L~~n~l~~~~~~~~------------------------------------------~~l~ 170 (667)
+++|+.|++++|.+.+ +|..+ ..++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCC
Confidence 3344444444444321 22211 3567
Q ss_pred CCCEEEccCCcCCCCc--CccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCc-ccccCCCCCCee
Q 042735 171 KLSTLNVSMNNITRSI--PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLP-SEIGSLTKLEFL 247 (667)
Q Consensus 171 ~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L 247 (667)
+|+.|++++|.+++.. |..+.++++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..| ..+..+++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 8899999999987654 67789999999999999999875544 9999999999999999987766 578999999999
Q ss_pred eccCCcCCccchhhhhcccCCCeecCCCccCc-cccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 248 NLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI-QELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 248 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~-~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
++++|.+.+..|..+.++++|+.|++++|.+. +.+|..+..+++|++|++++|.+.+..|..+..++.+..+
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 99999999999999999999999999999987 5799999999999999999999998888888777666655
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-34 Score=294.29 Aligned_cols=236 Identities=23% Similarity=0.313 Sum_probs=174.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--ceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR--HSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~--~~~ 497 (667)
++|...+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++|||||++++++.... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 46888899999999999999875 488999999864321 123456889999999999999999999998765 779
Q ss_pred EEEEecCCCChHHHhccccC---------------------------CcccccccCCeee----cCCCceEEeccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLL----DLEHKAHVSDFGIAKF 546 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLl----d~~~~~kl~DFGla~~ 546 (667)
+||||+++|+|.+.+..... ..|.||||+|||+ +.++.+||+|||+++.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999988865321 1134999999999 8888899999999987
Q ss_pred ccCCCCCcccccccccccCCC--------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccc-
Q 042735 547 LKPDSSNWSALVGTYRYVAPD--------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEM- 611 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE--------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~- 611 (667)
...... .....||+.|+||| |+.++|||||||++|||+||+.||....................
T Consensus 166 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 166 LEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred cCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 654432 34467999999998 24689999999999999999999853221111111111000000
Q ss_pred ----------------cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 612 ----------------LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 612 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+............+.+++.+||+.||++|||++|+++++....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 0011222222223344567788999999999999999999999987543
No 80
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-34 Score=289.26 Aligned_cols=223 Identities=26% Similarity=0.447 Sum_probs=172.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999998888999999875322 2356899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC-CCc
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-SNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-~~~ 554 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++...... ...
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999999988854321 1234999999999999999999999998654321 112
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....||+.|+||| ++.++||||+||++|||+| |+.||..... ..... .......+..+... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~------~ 233 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVE-DISTGFRLYKPRLA------S 233 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHH-HHHTTCCCCCCTTS------C
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH----HHHHH-HHhcCccCCCCCcC------C
Confidence 2345788899999 5779999999999999999 9999863221 11111 11111111112111 1
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|++|||++|+++++....
T Consensus 234 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 24667888999999999999999999987654
No 81
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=315.19 Aligned_cols=243 Identities=23% Similarity=0.233 Sum_probs=179.3
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCS 491 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~ 491 (667)
+.+.....++|+..+.||+|+||.||+|+.. +++.||||++.+... ......+.+.+|++++.+++|||||++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-LKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3344445689999999999999999999874 688999999753110 01112235889999999999999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhcccc--C-----------------------CcccccccCCeeecCCCceEEeccccccc
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDA--A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~--~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+.+..|+||||+++|+|.+++.... . ..|.||||+|||+|.++++||+|||+++.
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 9999999999999999999886421 1 11349999999999999999999999987
Q ss_pred ccCCCC-CcccccccccccCCC-------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc
Q 042735 547 LKPDSS-NWSALVGTYRYVAPD-------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 547 ~~~~~~-~~~~~~Gt~~y~aPE-------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
...... .....+||+.|+||| |+.++|||||||++|||+||+.||...... ...........
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~~~ 287 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA----ETYGKIVHYKE 287 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTHHH
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH----HHHHHHHhccc
Confidence 654432 223468999999999 467899999999999999999998643211 11111110000
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCC---CCHHHHHHHHHHhhhhhcc
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESR---PTMQTITQQLLFSLVYFSY 664 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~R---Pt~~ev~~~l~~~~~~~~~ 664 (667)
....+..... ...++.+++.+||. +|++| |+++||++|.||..+.|+.
T Consensus 288 ~~~~p~~~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~ 338 (412)
T 2vd5_A 288 HLSLPLVDEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDG 338 (412)
T ss_dssp HCCCC----C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred CcCCCccccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence 0111111011 11246678889999 99988 6999999999999887764
No 82
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=329.21 Aligned_cols=303 Identities=24% Similarity=0.284 Sum_probs=261.6
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccC-CccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSL-PSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
.++|+.|+|++|.|+++.|..|.++++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.+++..|..++. .+|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 468999999999999999999999999999999999655444 889999999999999999999988999987 569999
Q ss_pred EcccccccccCCcc--ccCCCCccEEEeeCcccccccC-ccCCCCCCCcEEEccCCccccccchhhhcC--CCCCEEECc
Q 042735 80 ALENNHFTGNLRHN--ICRNGALERVIVGGNHFRGPIP-KCLRNCPNLVRISLEGNNMRGTISEAFGIY--LNLTFLDIS 154 (667)
Q Consensus 80 ~L~~n~l~~~~~~~--~~~~~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l--~~L~~L~L~ 154 (667)
+|++|.+++.++.. +..+++|+.|++++|.+.+..+ ..++++++|++|+|++|.+++..+..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999866655 8899999999999999988755 579999999999999999999888888877 899999999
Q ss_pred CCccCCccCccCCCCCC------CCEEEccCCcCCCCcCccccC------------------------------------
Q 042735 155 DNNFFGEIASNWGKCPK------LSTLNVSMNNITRSIPLEIGN------------------------------------ 192 (667)
Q Consensus 155 ~n~l~~~~~~~~~~l~~------L~~L~L~~n~l~~~~p~~~~~------------------------------------ 192 (667)
+|.+.+..|..+..+++ |+.|++++|.+++..+..+..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99998888877776665 899999998776655543321
Q ss_pred --CCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCe
Q 042735 193 --LSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHY 270 (667)
Q Consensus 193 --l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 270 (667)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..+.++++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 257888999988888888888888999999999999888888888888999999999999988888888888889999
Q ss_pred ecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 271 LDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 271 L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
|++++|++....+..+..+++|++|++++|.+.+
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 9999888777667778888889999888888753
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.7e-34 Score=293.60 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=169.7
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS--TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc--CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 57888999999999999999874 5788999998654322 22346788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcc-cc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSN-DA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~-~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||++++ +.+.+.. .. ...|.||||+||+++.++.+||+|||+++.........
T Consensus 80 ~e~~~~~-l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 80 FEFCDQD-LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp EECCSEE-HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred EecCCCC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9999864 4333321 11 12245999999999999999999999998765544445
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCC-hhhhh----------hhhccccC---
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPS-PSVIN----------MRLDEMLD--- 613 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~-~~~~~----------~~~~~~~~--- 613 (667)
....||+.|+||| |+.++|||||||++|||+||+.|+......... ..... .......+
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 5678999999999 577899999999999999998885311100000 00000 00000000
Q ss_pred -CCCCCC---CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 614 -PRLPPP---SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 614 -~~~~~~---~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+..+.. ..........+.+++.+||+.||++|||++|++++.||...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 000000 00000112346688889999999999999999999998653
No 84
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.4e-35 Score=304.92 Aligned_cols=232 Identities=21% Similarity=0.321 Sum_probs=177.4
Q ss_pred HHcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
..++|+..+.||+|+||.||+|+... ++.||||++...... .....+.+.+|.+++..+ +||||+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 35789999999999999999998764 778999987542110 112245688999999988 799999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 99999999999998875421 122459999999999999999999999986544444
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....+||+.|+||| |+.++|||||||++|||++|+.||..... .......... ....+...+
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~~~~i~~~--~~~~p~~~s----- 245 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEH--NVAYPKSMS----- 245 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC-----
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH----HHHHHHHHhC--CCCCCCCCC-----
Confidence 455678999999999 67889999999999999999999863221 1111111111 122222211
Q ss_pred HHHHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.+|++||+ ++||+++.||....|+
T Consensus 246 -~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~ 286 (353)
T 2i0e_A 246 -KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 286 (353)
T ss_dssp -HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHH
T ss_pred -HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHH
Confidence 24667888999999999994 6999999999876654
No 85
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.4e-34 Score=289.40 Aligned_cols=224 Identities=26% Similarity=0.403 Sum_probs=159.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|... +..+|||++............+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999875 77899999865433222333567899999999999999999999999999999999
Q ss_pred EecCCCChHHHhcccc-----------------------C---CcccccccCCeeecC--------CCceEEeccccccc
Q 042735 501 EYLKRGSLATNLSNDA-----------------------A---AEELDISSKNVLLDL--------EHKAHVSDFGIAKF 546 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-----------------------~---~~~~dlk~~NiLld~--------~~~~kl~DFGla~~ 546 (667)
||+++|+|.+.+.... . ..|.||||+||+++. ++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 86 EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp ECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred EcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 9999999988764321 1 236699999999986 77899999999986
Q ss_pred ccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 547 LKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
..... .....||+.|+||| ++.++||||||+++|||+||+.||..... ................+...
T Consensus 166 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~ 239 (271)
T 3dtc_A 166 WHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG----LAVAYGVAMNKLALPIPSTC 239 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHHHHHTSCCCCCCCTTC
T ss_pred ccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHhhhcCCCCCCCCccc
Confidence 54332 22457999999999 67789999999999999999999863221 11111111111111122211
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+ ..+.+++.+||+.+|++|||+.|++++|..
T Consensus 240 ~------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 240 P------EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred C------HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1 246678889999999999999999999863
No 86
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=303.30 Aligned_cols=228 Identities=20% Similarity=0.276 Sum_probs=158.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++.+.+..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 357888999999999999999875 47789999986432 23568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecC---CCceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDL---EHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~---~~~~kl~DFGla~~~~~~~ 551 (667)
||||+++|+|.+.+..... ..|.||||+|||++. ++.+||+|||+++......
T Consensus 126 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp EECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999999988764321 123499999999975 8999999999998764332
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||...... .... ..+.........+....
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~----~~i~~~~~~~~~~~~~~ 277 (349)
T 2w4o_A 206 -LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD---QFMF----RRILNCEYYFISPWWDE 277 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH---HHHH----HHHHTTCCCCCTTTTTT
T ss_pred -ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc---HHHH----HHHHhCCCccCCchhhh
Confidence 234568999999999 678999999999999999999997532210 0011 11111111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
....+.+++.+||+.||++|||+.|++++.|+....
T Consensus 278 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 278 VSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313 (349)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 223566888899999999999999999999987544
No 87
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.6e-34 Score=287.33 Aligned_cols=222 Identities=27% Similarity=0.458 Sum_probs=171.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|++++.+++||||+++++++.+....++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 57888899999999999999998888899999865322 2356899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++....... ..
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 99999999987754211 12349999999999999999999999987654321 12
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....||+.|+||| ++.++||||||+++|||+| |+.||..... ...............+...+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------ 231 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----SEVVLKVSQGHRLYRPHLAS------ 231 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTCCCCCCTTSC------
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----HHHHHHHHcCCCCCCCCcCh------
Confidence 2345677899999 5789999999999999999 9999863321 11111111111111111111
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+.+++.+||+.+|++|||+.|++++|...
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 2466788899999999999999999998764
No 88
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=305.20 Aligned_cols=225 Identities=21% Similarity=0.296 Sum_probs=165.8
Q ss_pred cCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEe
Q 042735 424 DAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
...+.||+|+||.||+|.. .++..||||++.... ....+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 3456799999999999986 568899999986532 23456799999999999999999999999999999999999
Q ss_pred cCCCChHHHhcccc-------------------------CCcccccccCCeee--cCCCceEEecccccccccCCCCCcc
Q 042735 503 LKRGSLATNLSNDA-------------------------AAEELDISSKNVLL--DLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 503 ~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLl--d~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
+++|+|.+.+.... ...|.||||+|||+ +.++.+||+|||+++...... ...
T Consensus 168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~ 246 (373)
T 2x4f_A 168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLK 246 (373)
T ss_dssp CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCC
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccc
Confidence 99999988774321 11234999999999 577899999999999765433 234
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..+||+.|+||| |+.++|||||||++|||+||+.||...... ... ..+.......+..........
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~----~~i~~~~~~~~~~~~~~~~~~ 318 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA----ETL----NNILACRWDLEDEEFQDISEE 318 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHH----HHHHHTCCCSCSGGGTTSCHH
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----HHH----HHHHhccCCCChhhhccCCHH
Confidence 457999999999 567899999999999999999998633211 111 111111111111111112235
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+.+++.+||+.||++|||++|++++.|+....
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~ 350 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDHK 350 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence 67888899999999999999999999987543
No 89
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-34 Score=302.03 Aligned_cols=227 Identities=22% Similarity=0.356 Sum_probs=171.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||+|.+. ++..||||++..... ......+.+|+.++++++|||||++++++.+..
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 57888899999999999999853 356799999864322 234457999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc-------------------------------CCcccccccCCeeecCCC---ceEEec
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-------------------------------AAEELDISSKNVLLDLEH---KAHVSD 540 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~dlk~~NiLld~~~---~~kl~D 540 (667)
..++||||+++|+|.+++.... ...|.||||+|||++.++ .+||+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999998875421 012349999999999555 599999
Q ss_pred ccccccccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
||+++...... .......||+.|+||| |+.++|||||||++|||+| |+.||..... ..... .+...
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~----~~~~~-~i~~~ 302 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLE-FVTSG 302 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHH-HHHTT
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHcC
Confidence 99998643221 2233457899999999 6789999999999999998 9999863221 11111 11111
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.....+... ...+.+++.+||+.+|++|||+.||++++++....
T Consensus 303 ~~~~~~~~~------~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 GRMDPPKNC------PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCccC------CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 111111111 12466788899999999999999999999887543
No 90
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.3e-34 Score=293.20 Aligned_cols=229 Identities=22% Similarity=0.323 Sum_probs=166.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|+. .++..+|+|++...... .....+.|.+|+.++++++|||||++++++.+.+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 4688889999999999999986 46788999988543322 234456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-Cc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-NW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~~ 554 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++....... ..
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence 99999999998775422 122459999999999999999999999987654322 23
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC-CchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS-PDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 627 (667)
....||+.|+||| ++.++|||||||++|||+||+.||...... ..... . +....+... .......
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~---~-~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV----SIAIK---H-IQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH----HHHHH---H-HSSCCCCHHHHSCTTSC
T ss_pred CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHH---H-hhccCCCcchhcccCCC
Confidence 3467999999999 578999999999999999999998643210 00000 0 111111000 0000112
Q ss_pred HHHHHHHHhccccCCCCCC-CHHHHHHHHHHh
Q 042735 628 ISIMEVAFSCLDVSPESRP-TMQTITQQLLFS 658 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP-t~~ev~~~l~~~ 658 (667)
..+.+++.+||+.||++|| +++++.+.+...
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 2466788899999999998 888888877654
No 91
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.5e-34 Score=302.65 Aligned_cols=228 Identities=21% Similarity=0.277 Sum_probs=176.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|++++++++|||||++++++.+.+..++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 368899999999999999999875 688999998753211 011234578899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++..... .
T Consensus 119 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---T 195 (350)
T ss_dssp EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---B
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC---c
Confidence 999999999998875421 1124499999999999999999999999876432 2
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...+||+.|+||| |+.++|||||||++|||+||+.||..... .......... ...++...+ .
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~~--~~~~p~~~~------~ 263 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP----IQIYEKIVSG--KVRFPSHFS------S 263 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTCC------H
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH----HHHHHHHHcC--CCCCCCCCC------H
Confidence 3568999999999 57899999999999999999999853221 1111111111 112222222 2
Q ss_pred HHHHHHHhccccCCCCCCC-----HHHHHHHHHHhhhhhc
Q 042735 629 SIMEVAFSCLDVSPESRPT-----MQTITQQLLFSLVYFS 663 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt-----~~ev~~~l~~~~~~~~ 663 (667)
.+.+++.+||+.||++||+ ++||+++.||....|.
T Consensus 264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~ 303 (350)
T 1rdq_E 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWI 303 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHH
T ss_pred HHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHH
Confidence 4667888999999999999 9999999999876654
No 92
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-34 Score=302.87 Aligned_cols=228 Identities=25% Similarity=0.404 Sum_probs=171.8
Q ss_pred HHcCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
..++|...+.||+|+||.||+|++ .+++.||||++..... ....+.+.+|++++.++ +|||||+++|++.
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC---HHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 457899999999999999999973 2357899999875422 23456799999999999 7999999999998
Q ss_pred eCCc-eEEEEEecCCCChHHHhccccC-----------------------------------------------------
Q 042735 492 HARH-SILIYEYLKRGSLATNLSNDAA----------------------------------------------------- 517 (667)
Q Consensus 492 ~~~~-~~lv~ey~~~g~L~~~l~~~~~----------------------------------------------------- 517 (667)
+.+. .++||||+++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 7654 8999999999999988864321
Q ss_pred -------------------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--Cccccc
Q 042735 518 -------------------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS--NWSALV 558 (667)
Q Consensus 518 -------------------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~--~~~~~~ 558 (667)
..|.||||+|||++.++.+||+|||+++....... ......
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 11339999999999999999999999986643322 233467
Q ss_pred ccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHH
Q 042735 559 GTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIM 631 (667)
Q Consensus 559 Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (667)
||+.|+||| |+.++|||||||++|||+| |+.||...... . ..............+...+ ..+.
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~-~~~~~~~~~~~~~~~~~~~------~~l~ 326 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---E-EFCRRLKEGTRMRAPDYTT------PEMY 326 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS---H-HHHHHHHHTCCCCCCTTCC------HHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh---H-HHHHHHHcCCCCCCCCCCC------HHHH
Confidence 899999999 6789999999999999999 99998633211 1 1111111111122222221 2466
Q ss_pred HHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 632 EVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 632 ~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+++.+||+.+|++|||++|++++|....
T Consensus 327 ~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 327 QTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 7888999999999999999999998654
No 93
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-35 Score=300.56 Aligned_cols=230 Identities=26% Similarity=0.375 Sum_probs=157.2
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh--cCCCCeeEEEEEEEeCC----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK--IRHRNIVKFYGFCSHAR---- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~g~~~~~~---- 494 (667)
++|...+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 57889999999999999999875 788999997532 23457788888887 78999999999998876
Q ss_pred ceEEEEEecCCCChHHHhccc-------------------------------cCCcccccccCCeeecCCCceEEecccc
Q 042735 495 HSILIYEYLKRGSLATNLSND-------------------------------AAAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~-------------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
..++||||+++|+|.+++... ....|.||||+|||++.++.+||+|||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred eeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 789999999999998876431 1123559999999999999999999999
Q ss_pred cccccCCCCC----cccccccccccCCCCC------------CCchHHHHHHHHHHHHhC----------CCCCCCCccC
Q 042735 544 AKFLKPDSSN----WSALVGTYRYVAPDYR------------KKCDVYSFRVLALEVIKG----------KHPRGFVSSI 597 (667)
Q Consensus 544 a~~~~~~~~~----~~~~~Gt~~y~aPE~~------------~~~DV~sfGvvl~ElltG----------~~p~~~~~~~ 597 (667)
++........ .....||+.|+|||.. .++|||||||++|||+|| +.||......
T Consensus 155 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3gxj_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp -CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-
T ss_pred ceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC
Confidence 9866543322 2334799999999931 368999999999999999 4444321111
Q ss_pred CCC-hhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 598 LPS-PSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 598 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
... .............+..+... ........+.+++.+||+.||++|||++||++.|....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 235 DPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CCCCC-CHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred CccHHHHHHHHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 000 00111111112222222111 11234456888999999999999999999999987654
No 94
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=310.06 Aligned_cols=306 Identities=21% Similarity=0.233 Sum_probs=232.5
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccce-eCCCCCcc-cccCE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSG-SIPPSVGN-LMLTV 78 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~-~~L~~ 78 (667)
++++|+.|+|++|+++++.|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|++|++++ .+|..++. .+|++
T Consensus 43 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 119 (520)
T 2z7x_B 43 SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKF 119 (520)
T ss_dssp TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCE
T ss_pred ccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceE
Confidence 4789999999999999988999999999999999999998 46665 79999999999999986 46777877 46999
Q ss_pred EEcccccccccCCccccCCCCc--cEEEeeCccc--ccccCccCCCCC--------------------------------
Q 042735 79 LALENNHFTGNLRHNICRNGAL--ERVIVGGNHF--RGPIPKCLRNCP-------------------------------- 122 (667)
Q Consensus 79 L~L~~n~l~~~~~~~~~~~~~L--~~L~l~~n~~--~~~~p~~l~~l~-------------------------------- 122 (667)
|+|++|.+++ ..+..+.+| +.|++++|.+ .+..|..+..+.
T Consensus 120 L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~ 196 (520)
T 2z7x_B 120 LGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSN 196 (520)
T ss_dssp EEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECC
T ss_pred EEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecc
Confidence 9999998875 234445555 7777777766 555554444422
Q ss_pred ---------------------------------------------------CCcEEEccCCccccccchhh-----hcCC
Q 042735 123 ---------------------------------------------------NLVRISLEGNNMRGTISEAF-----GIYL 146 (667)
Q Consensus 123 ---------------------------------------------------~L~~L~L~~n~~~~~~~~~~-----~~l~ 146 (667)
+|+.|++++|++++.+|..+ +.++
T Consensus 197 l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~ 276 (520)
T 2z7x_B 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK 276 (520)
T ss_dssp EEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC
T ss_pred ccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCc
Confidence 56666677777766666655 5555
Q ss_pred CCCEEECcCCccCCccC-------------------------cc-CCCCCCCCEEEccCCcCCCCcCccccCCCCcCeee
Q 042735 147 NLTFLDISDNNFFGEIA-------------------------SN-WGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFD 200 (667)
Q Consensus 147 ~L~~L~L~~n~l~~~~~-------------------------~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 200 (667)
+|+.+++++|.+ .+| .. +..+++|++|++++|.+++..|..+.++++|++|+
T Consensus 277 ~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 354 (520)
T 2z7x_B 277 ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLI 354 (520)
T ss_dssp EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEE
T ss_pred eeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEE
Confidence 555555544444 222 11 25788899999999999888888888899999999
Q ss_pred ccCCcccc--cCCccccCCcccceeecccccccccCcc-cccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCcc
Q 042735 201 LSLNHIVG--KIPKEFGKLNSLTKLILRGNQLIGHLPS-EIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQ 277 (667)
Q Consensus 201 L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~ 277 (667)
+++|.+.+ .+|..++.+++|+.|++++|.+.+.+|. .+..+++|++|++++|.+++..|..+. ++|+.|++++|+
T Consensus 355 L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 355 LQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNK 432 (520)
T ss_dssp CCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSC
T ss_pred ccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCc
Confidence 99998876 4566788889999999999998875555 478888999999999998877776654 688999999888
Q ss_pred CccccchhhhcCCCCCEEECcCCCCCCcCccc-ccCCccccc
Q 042735 278 FIQELPKELGKLVQLSELELSHNFLGREIPSQ-ICSMECCEV 318 (667)
Q Consensus 278 ~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~-~~~~~~~~~ 318 (667)
+. .+|..+..+++|++|++++|.+. .+|.. +..+..+..
T Consensus 433 l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 472 (520)
T 2z7x_B 433 IK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQK 472 (520)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred cc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccE
Confidence 66 78888888899999999999886 56654 444444433
No 95
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.1e-35 Score=315.19 Aligned_cols=231 Identities=21% Similarity=0.319 Sum_probs=168.6
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+. .++..||||++...... .......+.+|++++++++|||||++++++.+.+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 46799999999999999999986 56889999987532110 11223567899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccc-------------------------cCCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSND-------------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~-------------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+++|+|.+.+... ....|.||||+|||++.++.+||+|||+|+........
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 305 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc
Confidence 99999999997765321 22345699999999999999999999999865444444
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....+||+.|+||| |+.++|||||||++|||+||+.||..... .......... ....+...+
T Consensus 306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~~--~~~~p~~~~------ 373 (446)
T 4ejn_A 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILME--EIRFPRTLG------ 373 (446)
T ss_dssp -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHC--CCCCCTTSC------
T ss_pred cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHHhC--CCCCCccCC------
Confidence 55678999999999 68899999999999999999999853221 1111111111 122222222
Q ss_pred HHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 628 ISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++|| |++|+++|.||....|.
T Consensus 374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~ 414 (446)
T 4ejn_A 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQ 414 (446)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHH
Confidence 2466788899999999999 99999999999876554
No 96
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.5e-34 Score=300.01 Aligned_cols=225 Identities=25% Similarity=0.292 Sum_probs=161.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 57889999999999999999875 688999999865322 124588999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCc--eEEecccccccccCCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHK--AHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~--~kl~DFGla~~~~~~~~~ 553 (667)
|||+++|+|.+.+.... ...|.||||+|||++.++. +||+|||+++...... .
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-~ 173 (361)
T 3uc3_A 95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 173 (361)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-C
Confidence 99999999988774321 1224599999999987765 9999999998543222 2
Q ss_pred cccccccccccCCC------CCC-CchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC--CCCCCCchH
Q 042735 554 WSALVGTYRYVAPD------YRK-KCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR--LPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~-~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 624 (667)
....+||+.|+||| |.. ++|||||||++|||+||+.||............. ..+.... .+....
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--- 246 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI----QRILSVKYSIPDDIR--- 246 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH----HHHHTTCCCCCTTSC---
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH----HHHhcCCCCCCCcCC---
Confidence 33467999999999 333 4899999999999999999986433211111111 1111111 111111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.+|++|||++|++++.||..
T Consensus 247 -~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 247 -ISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp -CCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred -CCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 1124667888999999999999999999999954
No 97
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-34 Score=315.62 Aligned_cols=235 Identities=20% Similarity=0.273 Sum_probs=178.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|++++++++|||||++++++.+....|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 367888899999999999999875 588999999854211 011223568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-----C-----------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 499 IYEYLKRGSLATNLSNDA-----A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-----~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
||||+++|+|.+++.... . ..|.||||+|||++.+|.+||+|||+++.....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 999999999998875421 1 113499999999999999999999999977655
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.......+||+.|+||| |+.++|||||||++|||+||+.||................... ....+...+
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s--- 417 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFS--- 417 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSC---
T ss_pred CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccC---
Confidence 44445568999999999 6789999999999999999999986432211111111111111 112222221
Q ss_pred HHHHHHHHHHHhccccCCCCCCCH-----HHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTM-----QTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~-----~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++||++ ++|+++.||..+.|.
T Consensus 418 ---~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~ 458 (543)
T 3c4z_A 418 ---PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458 (543)
T ss_dssp ---HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred ---HHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHH
Confidence 245678889999999999964 899999999876554
No 98
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=293.40 Aligned_cols=239 Identities=20% Similarity=0.329 Sum_probs=169.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... +++.+|||++..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 367889999999999999999875 488999998865432 23345678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++++|.+.+.... ...|.||||+||+++.++.+||+|||+++.........
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 999999999987765321 11244999999999999999999999998766444444
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh------------hhcccc-CC
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM------------RLDEML-DP 614 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~------------~~~~~~-~~ 614 (667)
....||+.|+||| |+.++|||||||++|||+||+.||............... ...... ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 5568999999999 477899999999999999999998633211000000000 000000 00
Q ss_pred CCCCCCC--ch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 615 RLPPPSP--DV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 615 ~~~~~~~--~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+.. .. ......+.+++.+||+.||++|||++|++++.||...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 291 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence 1111100 00 0112346788899999999999999999999998754
No 99
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.8e-34 Score=300.42 Aligned_cols=235 Identities=22% Similarity=0.352 Sum_probs=176.7
Q ss_pred HHHHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch----HHhHHHHHHHHHHHHhc-CCCCeeEEEE
Q 042735 415 EIIRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ----IADQKEFFAEIEALTKI-RHRNIVKFYG 488 (667)
Q Consensus 415 ~~~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~~~g 488 (667)
......++|+..+.||+|+||.||+|... +|+.||||++........ ....+.+.+|++++.++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445577999999999999999999875 688999998765332111 12245688999999999 7999999999
Q ss_pred EEEeCCceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEeccccc
Q 042735 489 FCSHARHSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIA 544 (667)
Q Consensus 489 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla 544 (667)
++......++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||++
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 9999999999999999999988775321 1123499999999999999999999999
Q ss_pred ccccCCCCCcccccccccccCCC------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
+...... .....+||+.|+||| |+.++|||||||++|||+||+.||..... ..... .+.
T Consensus 248 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~----~i~ 318 (365)
T 2y7j_A 248 CHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ----ILMLR----MIM 318 (365)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHH
T ss_pred cccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH----HHHHH----HHH
Confidence 8765433 234578999999999 35689999999999999999999853221 01111 111
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
........+........+.+++.+||+.||++|||++|++++.||.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 1111111111111223567888899999999999999999998874
No 100
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.4e-35 Score=306.31 Aligned_cols=231 Identities=23% Similarity=0.326 Sum_probs=168.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHH-HHhcCCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEA-LTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|+.. ++..+|||++...... .....+.+.+|..+ ++.++|||||++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 368999999999999999999875 4778999998653221 11233457778776 57789999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
+||||+++|+|.+++.... ...|.||||+|||++.++++||+|||+++........
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 9999999999988775421 1224599999999999999999999999875444444
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....+||+.|+||| |+.++|||||||++|||++|+.||..... .......... ....++..+
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~----~~~~~~i~~~--~~~~~~~~~------ 263 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT----AEMYDNILNK--PLQLKPNIT------ 263 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH----HHHHHHHHHS--CCCCCSSSC------
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhc--ccCCCCCCC------
Confidence 56679999999999 67899999999999999999999853221 1111111111 112222211
Q ss_pred HHHHHHHHhccccCCCCCCCH----HHHHHHHHHhhhhhc
Q 042735 628 ISIMEVAFSCLDVSPESRPTM----QTITQQLLFSLVYFS 663 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~----~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++||++ .|+.++.||....|+
T Consensus 264 ~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~ 303 (373)
T 2r5t_A 264 NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD 303 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHH
T ss_pred HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHH
Confidence 245678889999999999996 689999999876654
No 101
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=294.42 Aligned_cols=221 Identities=22% Similarity=0.279 Sum_probs=163.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~l 498 (667)
++|+..+.||+|+||+||+|+.. +++.||||++...... ......+.+|+..+.++ +|||||++++++.+.+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG--PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC--hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57899999999999999999875 6889999987654332 23344566777776666 89999999999999999999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+ +|+|.+.+.... ...|.||||+|||++.++.+||+|||+++...... .
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 212 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-A 212 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-C
Confidence 99999 678877654321 11244999999999999999999999998764332 2
Q ss_pred cccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 554 WSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
.....||+.|+||| |+.++|||||||++|||++|+.|+.... .. ..+.....++. .......
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-------~~----~~~~~~~~~~~--~~~~~~~ 279 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE-------GW----QQLRQGYLPPE--FTAGLSS 279 (311)
T ss_dssp --CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------HH----HHHTTTCCCHH--HHTTSCH
T ss_pred CcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HH----HHHhccCCCcc--cccCCCH
Confidence 34567999999999 5789999999999999999976643111 00 01111111110 0011123
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+.+++.+||+.||++|||++|++++.|+.
T Consensus 280 ~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 280 ELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 567888899999999999999999998875
No 102
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.2e-34 Score=316.46 Aligned_cols=234 Identities=20% Similarity=0.274 Sum_probs=178.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ........+.+|++++.+++|||||++++++.+.+..++
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 367888999999999999999874 688999998753211 011223568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~- 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence 9999999999988754321 1134999999999999999999999998765433
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||............... +. ......+...+
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~-i~-~~~~~~p~~~s----- 413 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL-VK-EVPEEYSERFS----- 413 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH-HH-HCCCCCCTTSC-----
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH-hh-cccccCCccCC-----
Confidence 234568999999999 678999999999999999999998643321111111111 11 11122222111
Q ss_pred HHHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.||++|| +++||++|.||..+.|.
T Consensus 414 -~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~ 454 (576)
T 2acx_A 414 -PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454 (576)
T ss_dssp -HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred -HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence 2466788899999999999 89999999999876553
No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-34 Score=303.33 Aligned_cols=228 Identities=19% Similarity=0.273 Sum_probs=173.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++|||||++++++.+....++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 367889999999999999999864 57889999886432 2334578999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-------------------------CcccccccCCeeecC--CCceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDL--EHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~--~~~~kl~DFGla~~~~~~~ 551 (667)
||||+++|+|.+.+..... ..|.||||+|||++. ++.+||+|||+++......
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999988764321 113499999999974 5789999999998765432
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||...... ......... ....+.. ....
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~~--~~~~~~~--~~~~ 276 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKRC--DWEFDED--AFSS 276 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHHC--CCCCCSS--TTTT
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHHHhC--CCCCCcc--cccc
Confidence 234568999999999 567899999999999999999998643211 111110000 1111111 0011
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+++.+||+.||++|||++|++++.|+...
T Consensus 277 ~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 12246788889999999999999999999988643
No 104
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.1e-34 Score=300.68 Aligned_cols=227 Identities=20% Similarity=0.267 Sum_probs=169.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|... +++.+|||++..... .+.+|++++.++ +|||||++++++.+++..+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 467899999999999999999874 578899999865322 234688888888 6999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecC-C---CceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDL-E---HKAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~-~---~~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+.+..... ..|.||||+|||+.. + +.+||+|||+++....
T Consensus 93 lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp EEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999999988754321 123499999999843 3 3599999999997665
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
........+||+.|+||| |+.++|||||||++|||++|+.||...... .............. ..+.. ..
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~i~~~~~--~~~~~--~~ 247 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-TPEEILARIGSGKF--SLSGG--YW 247 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-CHHHHHHHHHHCCC--CCCST--TT
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-CHHHHHHHHccCCc--ccCcc--cc
Confidence 544455678999999999 677999999999999999999998632111 00011111111111 11110 00
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
......+.+++.+||+.||++|||++|++++.|+..
T Consensus 248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 111224667888999999999999999999999854
No 105
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7e-34 Score=297.51 Aligned_cols=223 Identities=26% Similarity=0.389 Sum_probs=169.0
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|...+.||+|+||.||+|+. .+++.||||++..... ......+.+.+|++++++++|||||+++|++.+.+..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4588889999999999999986 5688899999865322 2233456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||++ |++.+.+.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----
Confidence 99998 67766553211 1224599999999999999999999999875432
Q ss_pred ccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 555 SALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 555 ~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
...+||+.|+||| |+.++|||||||++|||+||+.||...... .... .......+..... ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~--~~-- 278 (348)
T 1u5q_A 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALY-HIAQNESPALQSG--HW-- 278 (348)
T ss_dssp CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHHHSCCCCCCCT--TS--
T ss_pred CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHH-HHHhcCCCCCCCC--CC--
Confidence 3467999999999 456899999999999999999997532210 0110 1111111111111 11
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+.+++.+||+.+|++|||++|++++.|+..
T Consensus 279 -~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 279 -SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred -CHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 124567888999999999999999999998864
No 106
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=298.93 Aligned_cols=226 Identities=24% Similarity=0.380 Sum_probs=172.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC--------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+.. .+..||||++.... .....+.+.+|+++++++ +|||||++++++.
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 57888899999999999999752 23569999987542 233456799999999999 8999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeec
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLD 531 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld 531 (667)
+.+..++||||+++|+|.+++..... ..|.||||+|||++
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc
Confidence 99999999999999999998864320 11339999999999
Q ss_pred CCCceEEecccccccccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++...... .......||+.|+||| ++.++|||||||++|||+| |+.||..... ..
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----~~ 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----EE 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HH
Confidence 99999999999998765432 1233456889999999 5779999999999999999 9999753221 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.. ..+........+... ...+.+++.+||+.+|++|||++||+++|.....
T Consensus 302 ~~-~~~~~~~~~~~~~~~------~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 302 LF-KLLKEGHRMDKPSNC------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HH-HHHHTTCCCCCCSSC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH-HHHHcCCCCCCCccC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 111111112222211 1246678889999999999999999999887643
No 107
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7.9e-33 Score=316.71 Aligned_cols=249 Identities=21% Similarity=0.197 Sum_probs=188.3
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
++|+.|+|++|.++++.+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..++. .+|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999888888999999999999999999888999999999999999999998655556766 56999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhh--cCCCCCEEECcCCccC
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFG--IYLNLTFLDISDNNFF 159 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~--~l~~L~~L~L~~n~l~ 159 (667)
++|.+++..+..+.++.+|+.|++++|.+++..|..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|.+.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999887778899999999999999999988888889999999999999999887777665 4478888888888887
Q ss_pred CccCccCCCC---------------------------CCCCEEEccCCcCCCCcCccccCCCC--cCeeeccCCcccccC
Q 042735 160 GEIASNWGKC---------------------------PKLSTLNVSMNNITRSIPLEIGNLST--LNEFDLSLNHIVGKI 210 (667)
Q Consensus 160 ~~~~~~~~~l---------------------------~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~ 210 (667)
+..|..+..+ ++|+.|++++|.+.+..|..+.+++. |+.|+|++|.+.+..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 7666554432 34555566666665555555555543 666666666666555
Q ss_pred CccccCCcccceeecccccccccCcccccCCCCCCeeeccC
Q 042735 211 PKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLST 251 (667)
Q Consensus 211 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 251 (667)
|..|+.+++|+.|++++|.+.+..|..++++++|+.|++++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTT
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccc
Confidence 55566666666666666666555554444444444444443
No 108
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-34 Score=310.00 Aligned_cols=227 Identities=23% Similarity=0.365 Sum_probs=174.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|+++++.++|||||++++++.+.+..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 57888899999999999999875 688999998753210 0111245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++...... ...
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-~~~ 173 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLR 173 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-CBC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-ccc
Confidence 999999999988864321 1234999999999999999999999998765432 344
Q ss_pred cccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
+.+||+.|+||| | +.++||||+||++|||+||+.||..... ..... .+.+.....+.. . ..
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~----~i~~~~~~~p~~-~---s~ 241 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV----PTLFK----KICDGIFYTPQY-L---NP 241 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS----HHHHH----HHHTTCCCCCTT-C---CH
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH----HHHHH----HHhcCCcCCCcc-C---CH
Confidence 578999999999 2 4689999999999999999999863221 11111 111111111111 1 12
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+.+++.+||+.||++|||++|++++.|+....
T Consensus 242 ~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 242 SVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 466788899999999999999999999997543
No 109
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.6e-34 Score=309.45 Aligned_cols=223 Identities=24% Similarity=0.410 Sum_probs=170.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.++|...+.||+|+||.||+|.+.++..||||++.... ...+.|.+|++++++++|||||++++++. .+..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 35788889999999999999999888899999987532 13467999999999999999999999986 5678999
Q ss_pred EEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-
Q 042735 500 YEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS- 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~- 552 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.......
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 99999999998886421 112449999999999999999999999987643211
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......+|+.|+||| |+.++|||||||++|||+| |+.||..... ...... +........+...
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~----~~~~~~-i~~~~~~~~~~~~----- 410 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN----PEVIRA-LERGYRMPRPENC----- 410 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHH-HHHTCCCCCCTTS-----
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH----HHHHHH-HHcCCCCCCCCCC-----
Confidence 112345678999999 6789999999999999999 9999863221 111111 1111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+.+++.+||+.||++||||++|++.|....
T Consensus 411 -~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 411 -PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 225678888999999999999999999987653
No 110
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.5e-34 Score=292.35 Aligned_cols=232 Identities=27% Similarity=0.393 Sum_probs=166.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-- 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-- 493 (667)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++++++|||||++++++...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 5788889999999999999985 35788999998643 233456799999999999999999999999654
Q ss_pred CceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
...++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 55899999999999998875432 11244999999999999999999999998765
Q ss_pred CCCC---CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccC-------CCChhhhhhhhcccc
Q 042735 549 PDSS---NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI-------LPSPSVINMRLDEML 612 (667)
Q Consensus 549 ~~~~---~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~-------~~~~~~~~~~~~~~~ 612 (667)
.... ......||+.|+||| |+.++|||||||++|||+||..|+...... ..............+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 4322 123345788899999 678999999999999999999987532100 000000000000001
Q ss_pred -C-CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 613 -D-PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 613 -~-~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. ...+.+ .. ....+.+++.+||+.+|++|||++|++++|.....
T Consensus 246 ~~~~~~~~~-~~---~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNNGRLPRP-DG---CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTTCCCCCC-TT---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCcCCCC-cC---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1 111111 11 12256778889999999999999999999887644
No 111
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-33 Score=287.47 Aligned_cols=224 Identities=23% Similarity=0.411 Sum_probs=170.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.++|+..+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||+++++++.+.+..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 357888899999999999999999888999999875322 235689999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++....... .
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 99999999998886421 112349999999999999999999999986543211 1
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....||+.|+||| |+.++|||||||++|||+| |+.||..... ......+........+...+
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~----- 247 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----SETAEHIAQGLRLYRPHLAS----- 247 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTCCCCCCTTCC-----
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----hHHHHHHhcccCCCCCCcCC-----
Confidence 22345788899999 5779999999999999999 9999863321 11111111111111221111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|++|||++|++++|....
T Consensus 248 -~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 248 -EKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp -HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 24667888999999999999999999998654
No 112
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.1e-34 Score=289.14 Aligned_cols=230 Identities=23% Similarity=0.301 Sum_probs=175.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.... +..+|+|++..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3568889999999999999998754 67899998864322 224578999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeee---cCCCceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLL---DLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~~~ 551 (667)
||||+++|+|.+.+..... ..|.||||+||++ +.++.+||+|||+++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999999877643221 1244999999999 888999999999998765433
Q ss_pred CCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 552 SNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......||+.|+||| ++.++|||||||++|||+||+.||..... ..... .+.......+.......
T Consensus 164 -~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~ 234 (277)
T 3f3z_A 164 -MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTD----SEVML----KIREGTFTFPEKDWLNV 234 (277)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHHHCCCCCCHHHHTTS
T ss_pred -chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCH----HHHHH----HHHhCCCCCCchhhhcC
Confidence 234567999999999 57899999999999999999999863221 11111 11111111111111112
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
...+.+++.+||+.||++|||+.|++++.|+....-
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 235677888999999999999999999999976553
No 113
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-33 Score=292.51 Aligned_cols=232 Identities=27% Similarity=0.371 Sum_probs=165.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc--CCCCeeEEEEEEEeC----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI--RHRNIVKFYGFCSHA---- 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~~~g~~~~~---- 493 (667)
.++|+..+.||+|+||.||+|+.. +..||||++... ....+.+|.+++... +|||||++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 468999999999999999999886 788999987431 223455666666554 899999999999887
Q ss_pred CceEEEEEecCCCChHHHhccc-----------------------c--------CCcccccccCCeeecCCCceEEeccc
Q 042735 494 RHSILIYEYLKRGSLATNLSND-----------------------A--------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~-----------------------~--------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
...++||||+++|+|.+++... . ...|.||||+|||++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred CceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 6889999999999998876431 1 23466999999999999999999999
Q ss_pred ccccccCCCCC----cccccccccccCCCC------CCC------chHHHHHHHHHHHHhCC----------CCCCCCcc
Q 042735 543 IAKFLKPDSSN----WSALVGTYRYVAPDY------RKK------CDVYSFRVLALEVIKGK----------HPRGFVSS 596 (667)
Q Consensus 543 la~~~~~~~~~----~~~~~Gt~~y~aPE~------~~~------~DV~sfGvvl~ElltG~----------~p~~~~~~ 596 (667)
+++........ .....||+.|+|||. ..+ +|||||||++|||+||. .||.....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 99865433221 124579999999992 233 89999999999999994 44432211
Q ss_pred CCCChhhhh-hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 597 ILPSPSVIN-MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 597 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......... ........+..+... ........+.+++.+||+.||++|||+.||+++|.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 268 SDPSYEDMREIVCIKKLRPSFPNRW-SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGG-GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCchhhhHHHHhhhccCccccccc-hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 111111111 011111122222110 112345568889999999999999999999999987654
No 114
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.8e-33 Score=285.27 Aligned_cols=224 Identities=27% Similarity=0.441 Sum_probs=167.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhH---HHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQ---KEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|+. .+++.||||++............ +.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788889999999999999987 56888999998654332222211 57899999999999999999999986654
Q ss_pred EEEEEecCCCChHHHhccc-------------------------cC--CcccccccCCeeecCCCc-----eEEeccccc
Q 042735 497 ILIYEYLKRGSLATNLSND-------------------------AA--AEELDISSKNVLLDLEHK-----AHVSDFGIA 544 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~-------------------------~~--~~~~dlk~~NiLld~~~~-----~kl~DFGla 544 (667)
++||||+++|+|.+.+... .. ..|.||||+||+++.++. +||+|||++
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 7999999999997766322 12 446699999999988876 999999999
Q ss_pred ccccCCCCCcccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
+.... ......||+.|+|||. +.++|||||||++|||+||+.||...... ..............+..
T Consensus 177 ~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 177 QQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--KIKFINMIREEGLRPTI 251 (287)
T ss_dssp BCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC--HHHHHHHHHHSCCCCCC
T ss_pred ccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc--HHHHHHHHhccCCCCCC
Confidence 85432 2345679999999993 35789999999999999999998643211 00011111112222222
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
+...+ ..+.+++.+||+.||++|||++|+++.|..
T Consensus 252 ~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 252 PEDCP------PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CcccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 22222 246778889999999999999999998863
No 115
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-34 Score=304.41 Aligned_cols=235 Identities=23% Similarity=0.333 Sum_probs=174.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHAR 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~ 494 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++............+.+.+|++++.++ .||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999987 367899999986432111112234577899999999 5999999999999999
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..++||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 9999999999999988775321 1224599999999999999999999999865432
Q ss_pred C-CCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 S-SNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~-~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
. ......+||+.|+||| ++.++|||||||++|||+||+.||................. . ..+..+...+
T Consensus 213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~ 290 (355)
T 1vzo_A 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL-K-SEPPYPQEMS 290 (355)
T ss_dssp GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH-H-CCCCCCTTSC
T ss_pred CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh-c-cCCCCCcccC
Confidence 2 1233468999999999 35679999999999999999999863322111111111111 0 1122222211
Q ss_pred chHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHHHhhhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRP-----TMQTITQQLLFSLVYF 662 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RP-----t~~ev~~~l~~~~~~~ 662 (667)
..+.+++.+||+.||++|| |++|+++++||....+
T Consensus 291 ------~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~ 330 (355)
T 1vzo_A 291 ------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330 (355)
T ss_dssp ------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred ------HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence 2456788899999999999 9999999999986544
No 116
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-33 Score=295.39 Aligned_cols=228 Identities=22% Similarity=0.366 Sum_probs=172.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|+..+.||+|+||.||+|+.. ++..||||++..... ....+.|.+|++++++++|||||++++++.+.
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC---HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 468889999999999999999874 347899999875422 23456799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhcccc------------------------------------------------CCccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA------------------------------------------------AAEELDISS 525 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~------------------------------------------------~~~~~dlk~ 525 (667)
+..++||||+++|+|.+++.... ...|.||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 202 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 202 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence 99999999999999998875421 011349999
Q ss_pred CCeeecCCCceEEecccccccccCCC--CCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCcc
Q 042735 526 KNVLLDLEHKAHVSDFGIAKFLKPDS--SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSS 596 (667)
Q Consensus 526 ~NiLld~~~~~kl~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~ 596 (667)
+||+++.++.+||+|||+++...... .......||+.|+||| |+.++|||||||++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 99999999999999999998654322 1223457899999999 5779999999999999999 9999753221
Q ss_pred CCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 597 ILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..... .+.+...+...... ...+.+++.+||+.+|++|||+.|++++|......
T Consensus 283 ----~~~~~----~~~~~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 283 ----EEVIY----YVRDGNILACPENC---PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp ----HHHHH----HHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred ----HHHHH----HHhCCCcCCCCCCC---CHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 11111 11111111111111 12466788899999999999999999999876544
No 117
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-34 Score=290.60 Aligned_cols=228 Identities=21% Similarity=0.332 Sum_probs=157.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|+. .+++.||||.+..... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 46789999999999999999986 5688999998753210 011123578999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++........
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 168 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc
Confidence 9999999999988764311 113499999999999999999999999876543333
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....||+.|+||| ++.++|||||||++|||+||+.||......... ... ...+...+... .
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~--~~~~~~~~~~~------~ 236 (278)
T 3cok_A 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----NKV--VLADYEMPSFL------S 236 (278)
T ss_dssp -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------C--CSSCCCCCTTS------C
T ss_pred ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----HHH--hhcccCCcccc------C
Confidence 34567999999999 467899999999999999999998643211100 000 00111122111 1
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.||++|||++|++++.|+...
T Consensus 237 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 237 IEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 246678889999999999999999999888643
No 118
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2e-33 Score=283.51 Aligned_cols=221 Identities=20% Similarity=0.304 Sum_probs=170.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~~~ 497 (667)
.++|...+.||+|+||.||+|+.. +..+|||++...... ....+.|.+|++++++++|||||++++++.+. +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS--TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC--HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC--HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 357888999999999999999985 778999998754322 23456799999999999999999999999887 7889
Q ss_pred EEEEecCCCChHHHhcccc--------------------------C--CcccccccCCeeecCCCceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDA--------------------------A--AEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~--------------------------~--~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+++.... . ..|.||||+||+++.++.+||+|||++.....
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999998876432 1 23459999999999999999999998765322
Q ss_pred CCCCcccccccccccCCCC------CC---CchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 550 DSSNWSALVGTYRYVAPDY------RK---KCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE~------~~---~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
....||+.|+|||. .. ++|||||||++|||+||+.||..... .............+..+...
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN----MEIGMKVALEGLRPTIPPGI 236 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH----HHHHHHHHHSCCCCCCCTTC
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh----HHHHHHHHhcCCCCCCCCCC
Confidence 23578999999992 22 69999999999999999999863321 11111111122222233222
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+ ..+.+++.+||+.||++|||++|+++.|...
T Consensus 237 ~------~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 237 S------PHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 2 2466788899999999999999999998764
No 119
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.5e-33 Score=309.98 Aligned_cols=297 Identities=23% Similarity=0.273 Sum_probs=243.1
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccce-eCCCCCcc-cccCE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSG-SIPPSVGN-LMLTV 78 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~-~~L~~ 78 (667)
++++|+.|+|++|.|+++.|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|++|++++ .+|..++. .+|+.
T Consensus 74 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~ 150 (562)
T 3a79_B 74 FLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTF 150 (562)
T ss_dssp TCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCE
T ss_pred cCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccE
Confidence 4789999999999999998999999999999999999998 56666 79999999999999986 34567776 46999
Q ss_pred EEcccccccccCCccccCCCCc--cEEEeeCccc--ccccCccCCCCC--------------------------------
Q 042735 79 LALENNHFTGNLRHNICRNGAL--ERVIVGGNHF--RGPIPKCLRNCP-------------------------------- 122 (667)
Q Consensus 79 L~L~~n~l~~~~~~~~~~~~~L--~~L~l~~n~~--~~~~p~~l~~l~-------------------------------- 122 (667)
|+|++|.+.+.. +..+.+| +.|++++|.+ ++..|..+..+.
T Consensus 151 L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~ 227 (562)
T 3a79_B 151 LGLSAAKFRQLD---LLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSN 227 (562)
T ss_dssp EEEECSBCCTTT---TGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEE
T ss_pred EecCCCccccCc---hhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEec
Confidence 999999887532 3333344 7777777776 555454443322
Q ss_pred -------------------------------------------------CCcEEEccCCccccccchhh-----------
Q 042735 123 -------------------------------------------------NLVRISLEGNNMRGTISEAF----------- 142 (667)
Q Consensus 123 -------------------------------------------------~L~~L~L~~n~~~~~~~~~~----------- 142 (667)
+|++|++++|.+++.+|..+
T Consensus 228 l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L 307 (562)
T 3a79_B 228 IKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSL 307 (562)
T ss_dssp EECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEE
T ss_pred ccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchhe
Confidence 56666666666665544433
Q ss_pred ------------------------------------------hcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCC
Q 042735 143 ------------------------------------------GIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMN 180 (667)
Q Consensus 143 ------------------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 180 (667)
..+++|++|++++|.+.+..|..+..+++|+.|++++|
T Consensus 308 ~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 387 (562)
T 3a79_B 308 MIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRN 387 (562)
T ss_dssp EEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSS
T ss_pred ehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCC
Confidence 67889999999999999989999999999999999999
Q ss_pred cCCCC--cCccccCCCCcCeeeccCCcccccCCc-cccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCcc
Q 042735 181 NITRS--IPLEIGNLSTLNEFDLSLNHIVGKIPK-EFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 181 ~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
++++. +|..+.++++|++|++++|.+.+.+|. .+..+++|+.|++++|.+++..|..+. ++|+.|+|++|+++.
T Consensus 388 ~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~- 464 (562)
T 3a79_B 388 GLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS- 464 (562)
T ss_dssp CCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-
T ss_pred CcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-
Confidence 99873 356789999999999999999985554 588999999999999999887776554 799999999999985
Q ss_pred chhhhhcccCCCeecCCCccCccccchh-hhcCCCCCEEECcCCCCCCcCc
Q 042735 258 IPESLGNLLKLHYLDLSKYQFIQELPKE-LGKLVQLSELELSHNFLGREIP 307 (667)
Q Consensus 258 ~p~~~~~l~~L~~L~ls~n~~~~~~p~~-l~~l~~L~~L~l~~n~l~~~ip 307 (667)
+|..+..+++|+.|++++|++. .+|.. +..+++|+.|++++|++....|
T Consensus 465 ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 465 IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 6777779999999999999987 57766 8999999999999999876544
No 120
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.8e-32 Score=312.21 Aligned_cols=301 Identities=24% Similarity=0.250 Sum_probs=133.8
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCC--CCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-------
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKS--LVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN------- 73 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~------- 73 (667)
++|+.|++++|.+++..|..|.+++. |++|+|++|++.+..|..|+.+++|++|+|++|++++..|..+..
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 34455555555554444444444432 555555555554444444445555555555555444444433322
Q ss_pred ---------------------------cccCEEEcccccccccCCccccCCCCccEEEeeCccccccc--CccCCC--CC
Q 042735 74 ---------------------------LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPI--PKCLRN--CP 122 (667)
Q Consensus 74 ---------------------------~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~--p~~l~~--l~ 122 (667)
.+|+.|+|++|.+.+..+..+..+.+|+.|++++|.+.... +..+.. .+
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 23555555555555544444444444444444433321100 000000 12
Q ss_pred CCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC-ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeec
Q 042735 123 NLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA-SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDL 201 (667)
Q Consensus 123 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 201 (667)
+|+.|++++|++++..+..|..+++|+.|++++|.+.+.+| ..|..+++|+.|++++|.+.+..+..|..+++|+.|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 23333333344444444455555555555555555544333 34555555555555555554444444444444444444
Q ss_pred cCCccc--ccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccch--------hhhhcccCCCee
Q 042735 202 SLNHIV--GKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIP--------ESLGNLLKLHYL 271 (667)
Q Consensus 202 ~~n~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L 271 (667)
++|.+. +.+|..|.++++|+.|++++|.+++..+..|.++++|++|+|++|.+++..+ ..+.++++|+.|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 444443 2334444444444444444444444334444444444444444444443211 113344444444
Q ss_pred cCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 272 DLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 272 ~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
++++|++....+..|..+++|+.|++++|.++
T Consensus 542 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 573 (680)
T 1ziw_A 542 NLESNGFDEIPVEVFKDLFELKIIDLGLNNLN 573 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCCCHHHcccccCcceeECCCCCCC
Confidence 44444433222223444444444444444443
No 121
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9e-34 Score=302.02 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=172.7
Q ss_pred HcCCcCcceeecc--cCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 420 INDFDAKYCIGSG--RHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g--~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
.++|+..+.||+| +||.||+|+.. +++.||||++...... ....+.+.+|++++++++|||||++++++.+.+..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 3678899999999 99999999875 6889999998653322 23456788999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
++||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||.+......
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999998875421 1123499999999999999999999998654321
Q ss_pred C-------CCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 551 S-------SNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 551 ~-------~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
. ......+||+.|+||| |+.++|||||||++|||+||+.||.....................+..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 1 1123357999999998 467899999999999999999998632211100000000000000000
Q ss_pred ---------------------------CC-------CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 616 ---------------------------LP-------PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 616 ---------------------------~~-------~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+ ...+........+.+++.+||+.||++|||++|++++.||....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 00 00000011123577889999999999999999999999987543
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-33 Score=285.65 Aligned_cols=228 Identities=22% Similarity=0.298 Sum_probs=154.0
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 35789999999999999999985 56789999998654322 22335678999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+ +|++.+.+.... ...|.||||+||+++.++.+||+|||+++...... ..
T Consensus 91 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 168 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FL 168 (275)
T ss_dssp EEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred Eehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-cc
Confidence 99999 667766654321 12244999999999999999999999998655432 23
Q ss_pred ccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
...+||+.|+||| + +.++|||||||++|||+||+.||..... ...... .... ....+...+
T Consensus 169 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~-~~~~-~~~~~~~~~------ 236 (275)
T 2eue_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI----PVLFKN-ISNG-VYTLPKFLS------ 236 (275)
T ss_dssp ------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHH-HHHT-CCCCCTTSC------
T ss_pred cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH----HHHHHH-HHhC-CCCCCccCC------
Confidence 4467999999999 2 5789999999999999999999863221 111111 1110 111222111
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
..+.+++.+||+.||++|||++|++++.||.....
T Consensus 237 ~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~~ 271 (275)
T 2eue_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred HHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccch
Confidence 24667888999999999999999999999976543
No 123
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.7e-33 Score=299.41 Aligned_cols=226 Identities=22% Similarity=0.354 Sum_probs=168.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC--CCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR--HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~~~g~~~~~~~~~l 498 (667)
.+|+..+.||+|+||.||+|....++.||||++..... .....+.+.+|++++.+++ |||||++++++...+..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 35888999999999999999988889999999865432 2334567999999999997 5999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
||| +.+|+|.+++.... ...|.||||+|||++ ++.+||+|||+++.......
T Consensus 134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 999 57889988775432 122459999999996 58999999999987654322
Q ss_pred CcccccccccccCCC-----------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 553 NWSALVGTYRYVAPD-----------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-----------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
.....+||+.|+||| |+.++|||||||++|||+||+.||..... ... ....++++.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~~----~~~~~~~~~ 284 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QIS----KLHAIIDPN 284 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HHH----HHHHHHCTT
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH---HHH----HHHHHhCcc
Confidence 234568999999999 34479999999999999999999853211 001 111222222
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.....+... ...+.+++.+||+.||++|||+.|++++.|+..
T Consensus 285 ~~~~~~~~~--~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 285 HEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp SCCCCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred ccCCCCccc--hHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 211111110 124667888999999999999999999999864
No 124
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-33 Score=304.49 Aligned_cols=219 Identities=25% Similarity=0.426 Sum_probs=167.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-ceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR-HSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~-~~~l 498 (667)
.++|...+.||+|+||.||+|.+. +..||||+++... ..+.|.+|++++++++|||||+++|++.+.+ ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 357888899999999999999886 6689999987532 2357999999999999999999999987765 7899
Q ss_pred EEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++.....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999988864321 113499999999999999999999999864322
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....+|+.|+||| |+.++|||||||++|||+| |+.||...... .... .+........+...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~-~i~~~~~~~~p~~~----- 411 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVP-RVEKGYKMDAPDGC----- 411 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THHH-HHHTTCCCCCCTTC-----
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH-HHHcCCCCCCCCcC-----
Confidence 22346789999999 6789999999999999999 99998643211 1111 11111111222222
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+.+++.+||+.||++|||+.|+++.|....
T Consensus 412 -~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 412 -PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 225677888999999999999999999887653
No 125
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.3e-33 Score=299.21 Aligned_cols=227 Identities=20% Similarity=0.283 Sum_probs=160.4
Q ss_pred HcCCcCc-ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHH-hcCCCCeeEEEEEEEe----
Q 042735 420 INDFDAK-YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALT-KIRHRNIVKFYGFCSH---- 492 (667)
Q Consensus 420 ~~~f~~~-~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~~~g~~~~---- 492 (667)
.++|... +.||+|+||.||+|... +++.||||++... ..+.+|++++. ..+|||||++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 3566665 68999999999999864 5788999998531 24678888875 4579999999999875
Q ss_pred CCceEEEEEecCCCChHHHhcccc---C-----------------------CcccccccCCeeecC---CCceEEecccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDL---EHKAHVSDFGI 543 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~---~~~~kl~DFGl 543 (667)
....++||||+++|+|.+++.... . ..|.||||+|||++. ++.+||+|||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 567899999999999998886432 1 113499999999997 78999999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
++...... ..+..+||+.|+||| |+.++|||||||++|||+||+.||..................... ..+
T Consensus 211 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~--~~~ 287 (400)
T 1nxk_A 211 AKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFP 287 (400)
T ss_dssp CEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC--CCC
T ss_pred ccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc--cCC
Confidence 98754332 234678999999999 577899999999999999999998643322111111111111111 111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+ ........+.+++.+||+.||++|||++|++++.|+...
T Consensus 288 ~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 288 NP--EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp TT--TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred Cc--ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 11 111112346788889999999999999999999998643
No 126
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.7e-33 Score=292.55 Aligned_cols=224 Identities=21% Similarity=0.385 Sum_probs=162.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCce----EEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEF----LAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~----~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|+..+.||+|+||.||+|+.. ++.. ||+|.+..... ....+.|.+|+.++++++|||||+++++|.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 57888999999999999999864 3443 58887754321 233467999999999999999999999998764
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++|+||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 788999999999998875421 1124499999999999999999999999876543
Q ss_pred CCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
... .....||+.|+||| |+.++|||||||++|||+| |+.||...... .. ...+........+..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~-~~~~~~~~~~~~~~~-- 243 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EI-SSILEKGERLPQPPI-- 243 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH-HHHHHTTCCCCCCTT--
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HH-HHHHHcCCCCCCCcc--
Confidence 322 23345788999999 6789999999999999999 99998643211 11 111111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.+|++|||+.|+++++....
T Consensus 244 ----~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 244 ----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ----BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1225677888999999999999999999987653
No 127
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.6e-33 Score=289.27 Aligned_cols=226 Identities=24% Similarity=0.413 Sum_probs=172.4
Q ss_pred HcCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
.++|...+.||+|+||.||+|.. .++..||||++.... .....+.+.+|++++++++|||||++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 35788889999999999999975 234789999986532 233456799999999999999999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC------------------------------------------------Cccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA------------------------------------------------AEELDISS 525 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~------------------------------------------------~~~~dlk~ 525 (667)
+..++||||+++|+|.+++..... ..|.||||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp 178 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccch
Confidence 999999999999999988864211 11239999
Q ss_pred CCeeecCCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCcc
Q 042735 526 KNVLLDLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSS 596 (667)
Q Consensus 526 ~NiLld~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~ 596 (667)
+||+++.++.+||+|||+++........ .....||+.|+||| |+.++|||||||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876543221 23346788999999 6789999999999999999 9999863321
Q ss_pred CCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 597 ILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..... .......+..+... ...+.+++.+||+.||++|||++|++++|....
T Consensus 259 ----~~~~~-~~~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 ----ERLFN-LLKTGHRMERPDNC------SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp ----GGHHH-HHHTTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HHHHH-HhhcCCcCCCCccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111 11111111222211 124667888999999999999999999987653
No 128
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.6e-33 Score=288.96 Aligned_cols=249 Identities=27% Similarity=0.457 Sum_probs=210.2
Q ss_pred CCCCEEEccCccccc--cCCccccCCCCCCeeeccc-cccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccE
Q 042735 27 KSLVKLGLGGNQFRG--SLPSSVGNLSSLRYLFLFE-NNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALER 102 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 102 (667)
.+++.|+|++|.+++ .+|..|+++++|++|+|++ |.+.+.+|..++. .+|++|+|++|.+++.+|..+..+.+|+.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 567888888888877 7778888888888888884 7777777777766 45888888888888778888888888888
Q ss_pred EEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCC-CCCEEECcCCccCCccCccCCCCCCCCEEEccCCc
Q 042735 103 VIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYL-NLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNN 181 (667)
Q Consensus 103 L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 181 (667)
|++++|.+++.+|..+..+++|++|+|++|.+++.+|..+..++ +|++|++++|.+.+.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888888888888888888899888888888888888887 888999998888888888888887 9999999998
Q ss_pred CCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhh
Q 042735 182 ITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPES 261 (667)
Q Consensus 182 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 261 (667)
+++..|..+.++++|+.|+|++|.+.+.+|. +..+++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8888888888899999999999988876655 788889999999999998888988999999999999999998888876
Q ss_pred hhcccCCCeecCCCccC
Q 042735 262 LGNLLKLHYLDLSKYQF 278 (667)
Q Consensus 262 ~~~l~~L~~L~ls~n~~ 278 (667)
..+++|+.+++++|+.
T Consensus 288 -~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKC 303 (313)
T ss_dssp -TTGGGSCGGGTCSSSE
T ss_pred -ccccccChHHhcCCCC
Confidence 7888999999998874
No 129
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=287.96 Aligned_cols=222 Identities=27% Similarity=0.493 Sum_probs=162.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++|++. +..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEE
Confidence 57888899999999999999885 677999998542 23467999999999999999999999886 4589999
Q ss_pred EecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCc-eEEecccccccccC
Q 042735 501 EYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHK-AHVSDFGIAKFLKP 549 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~-~kl~DFGla~~~~~ 549 (667)
||+++|+|.+++.... ...|.||||+||+++.++. +||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999988775321 1235599999999998886 79999999986543
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
. .....||+.|+||| |+.++|||||||++|||+||+.||...... ...... .......+..+...+
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~-- 230 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP--AFRIMW-AVHNGTRPPLIKNLP-- 230 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS--HHHHHH-HHHTTCCCCCBTTCC--
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc--HHHHHH-HHhcCCCCCcccccC--
Confidence 2 23457999999999 577999999999999999999998632210 000000 111111111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
..+.+++.+||+.+|++|||++|+++.|.....++.
T Consensus 231 ----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 231 ----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 246678889999999999999999999988776654
No 130
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.1e-33 Score=287.34 Aligned_cols=226 Identities=24% Similarity=0.374 Sum_probs=175.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|+..+.||+|+||.||+|.. .+++.||||.+...... ...+.+.+|+.++++++||||+++++++.+....++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 4578889999999999999976 46888999998654322 2346799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCCCCccc
Q 042735 500 YEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSA 556 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~ 556 (667)
|||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++...........
T Consensus 99 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 99 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp EECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 999999999988764321 123499999999999999999999999876554434455
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISI 630 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (667)
..||+.|+||| ++.++|||||||++|||+||+.||..... ............+..+...+ ..+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~l 247 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYS------KPL 247 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCCCSSCC------HHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-----HHHHHHhhcCCCCCCccccC------HHH
Confidence 68999999999 56789999999999999999999863221 11111111111122222221 246
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 631 MEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 631 ~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+++.+||+.+|++|||+.|++++.|+...
T Consensus 248 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 248 KEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 678889999999999999999999998654
No 131
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.1e-34 Score=296.68 Aligned_cols=242 Identities=19% Similarity=0.284 Sum_probs=166.3
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++|||||++++++.+.+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 457899999999999999999975 5688899999865432 2223456889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeec-----CCCceEEeccccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLD-----LEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld-----~~~~~kl~DFGla~~~~ 548 (667)
+||||++ |+|.+.+.... ...|.||||+|||++ .++.+||+|||+++...
T Consensus 110 lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999998 48887765431 122459999999994 55569999999998765
Q ss_pred CCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh----------hccc
Q 042735 549 PDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR----------LDEM 611 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~----------~~~~ 611 (667)
..........||+.|+||| |+.++|||||||++|||+||+.||................ ....
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 4444445568899999999 5778999999999999999999986322110000000000 0000
Q ss_pred --cCCCCCCCCC-chHH-----HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 612 --LDPRLPPPSP-DVQG-----KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 612 --~~~~~~~~~~-~~~~-----~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.....+.... .... ....+.+++.+||+.||++|||++|++++.||....|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 328 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCSC
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCCC
Confidence 0000000000 0000 11356788999999999999999999999999887764
No 132
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-33 Score=323.58 Aligned_cols=307 Identities=24% Similarity=0.217 Sum_probs=186.2
Q ss_pred CCCCcEEeccCCcCcC-CCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCC--Ccc-cccC
Q 042735 2 LTNLRELHLRDNYLTG-LIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPS--VGN-LMLT 77 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~-~~L~ 77 (667)
+++|+.|+|++|.+.+ +.|..|.++++|++|+|++|.|.+..|.+|+++++|++|+|++|.+++.+|.. +.. .+|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 4566666666664332 23555666666666666666666655666666666666666666665544432 433 3466
Q ss_pred EEEcccccccccCC-ccccCCCCccEEEeeCcccccccCccC--------------------------CCC---------
Q 042735 78 VLALENNHFTGNLR-HNICRNGALERVIVGGNHFRGPIPKCL--------------------------RNC--------- 121 (667)
Q Consensus 78 ~L~L~~n~l~~~~~-~~~~~~~~L~~L~l~~n~~~~~~p~~l--------------------------~~l--------- 121 (667)
.|+|++|.+++..+ ..+.++++|+.|++++|.+++..|..+ ..+
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 66666666654433 345555556666555555543322211 111
Q ss_pred -----------------------------------------------------------CCCcEEEccCCccccccchhh
Q 042735 122 -----------------------------------------------------------PNLVRISLEGNNMRGTISEAF 142 (667)
Q Consensus 122 -----------------------------------------------------------~~L~~L~L~~n~~~~~~~~~~ 142 (667)
++|+.|+|++|.+++..+..|
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 345556666666655556666
Q ss_pred hcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccce
Q 042735 143 GIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTK 222 (667)
Q Consensus 143 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 222 (667)
..+++|+.|+|++|.+.+..+..|..+++|+.|+|++|.+.+..|..|.++++|+.|++++|.+.+..+..|.++++|+.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 66777777777777776666667777777777777777777666667777777777777777776666666777777777
Q ss_pred eecccccccccC------------------c----------------------ccccCCCCCCeeeccCCcCCcc-----
Q 042735 223 LILRGNQLIGHL------------------P----------------------SEIGSLTKLEFLNLSTNRFSSL----- 257 (667)
Q Consensus 223 L~L~~n~l~~~~------------------p----------------------~~~~~l~~L~~L~Ls~N~l~~~----- 257 (667)
|+|++|.+++.. | ..++.+++|+.|+|++|++++.
T Consensus 367 L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 446 (844)
T 3j0a_A 367 LDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQT 446 (844)
T ss_dssp EEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSS
T ss_pred EECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccc
Confidence 777777654311 0 0122455555555555555432
Q ss_pred -------------------------chhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcc
Q 042735 258 -------------------------IPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPS 308 (667)
Q Consensus 258 -------------------------~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~ 308 (667)
.+..+.++++|+.|+|++|++.+..|..+..+++|+.|++++|.+++..|.
T Consensus 447 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 447 PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp SCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred cccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChh
Confidence 123355566677777777776666666777778888888888877654443
No 133
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-33 Score=287.11 Aligned_cols=229 Identities=21% Similarity=0.300 Sum_probs=172.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 67889999999999999999864 578899998864332 223456788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCc---eEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHK---AHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~---~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++. +||+|||++.......
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~- 162 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE- 162 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-
Confidence 99999999977664321 1124499999999986655 9999999998765332
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......||+.|+||| |+.++||||||+++|||++|+.||..... ............. .+. +.....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~--~~~--~~~~~~ 234 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQIKAGAYD--YPS--PEWDTV 234 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHTCCC--CCT--TTTTTS
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch----hHHHHHHHhcccc--CCc--hhhccc
Confidence 234567999999999 57789999999999999999999853221 1111111111111 111 111111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+.+++.+||+.||++|||++|++++.|+...
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence 2346678889999999999999999999998754
No 134
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5e-34 Score=289.46 Aligned_cols=228 Identities=24% Similarity=0.400 Sum_probs=172.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~~ 496 (667)
.++|+..+.||+|+||.||+|... +++.+|+|++...... ....+.+.+|++++++++||||+++++++.+ ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 467889999999999999999874 6788999998654322 2345679999999999999999999998854 5678
Q ss_pred EEEEEecCCCChHHHhcccc----------------------------C-----CcccccccCCeeecCCCceEEecccc
Q 042735 497 ILIYEYLKRGSLATNLSNDA----------------------------A-----AEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~----------------------------~-----~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
++||||+++|+|.+.+.... . ..|.||||+||+++.++.+||+|||+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 99999999999988764210 1 34559999999999999999999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
++.............||+.|+||| ++.++||||||+++|||+||+.||..... ..... .+.....+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~-~i~~~~~~~~~ 237 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ----KELAG-KIREGKFRRIP 237 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH-HHHHTCCCCCC
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH----HHHHH-HHhhcccccCC
Confidence 987654332233467999999999 57789999999999999999999864321 11111 11111111222
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+ ..+.+++.+||+.+|++|||++||++++++...
T Consensus 238 ~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 YRYS------DELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp TTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cccC------HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 2111 246678889999999999999999999887644
No 135
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-33 Score=292.64 Aligned_cols=231 Identities=17% Similarity=0.231 Sum_probs=174.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch--HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ--IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
++|+..+.||+|+||.||+|... ++..+|||.+........ ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 56888999999999999999875 578899998865432111 113467999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC----ceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH----KAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~----~~kl~DFGla~~~~~ 549 (667)
+||||+++|+|.+++..... ..|.||||+||+++.++ .+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~ 171 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (321)
T ss_dssp EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence 99999999999988764321 12349999999999888 799999999987654
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. ......||+.|+||| |+.++|||||||++|||+||+.||..... .... ..+.......+....
T Consensus 172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~----~~i~~~~~~~~~~~~ 242 (321)
T 2a2a_A 172 GV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETL----ANITSVSYDFDEEFF 242 (321)
T ss_dssp TC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHH----HHHHTTCCCCCHHHH
T ss_pred cc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH----HHHH----HHHHhcccccChhhh
Confidence 32 234567999999999 57789999999999999999999853221 0111 111111111100000
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......+.+++.+||+.||++|||++|++++.|+...
T Consensus 243 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 1112346788889999999999999999999988643
No 136
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=293.68 Aligned_cols=226 Identities=23% Similarity=0.356 Sum_probs=167.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC--CCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH--RNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~g~~~~~~~~~l 498 (667)
..|+..+.||+|+||.||+|...++..||||++..... .....+.+.+|++++.+++| ||||++++++.+....++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 45888899999999999999988899999999865432 23345679999999999987 999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
||| +.+|+|.+++.... ...|.||||+|||++ ++.+||+|||+++.......
T Consensus 87 v~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred EEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 999 56789988775432 122459999999997 67899999999987654322
Q ss_pred CcccccccccccCCCC-----------------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 553 NWSALVGTYRYVAPDY-----------------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-----------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
.....+||+.|+|||+ +.++|||||||++|||+||+.||..... ... .....+++.
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~----~~~~~~~~~ 237 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QIS----KLHAIIDPN 237 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HHH----HHHHHHCTT
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh---HHH----HHHHHhcCC
Confidence 2235689999999993 3478999999999999999999853211 001 111222222
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.....+... ...+.+++.+||+.||++|||+.|++++.|+..
T Consensus 238 ~~~~~~~~~--~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 238 HEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp SCCCCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred cccCCcccC--CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 111111100 124667888999999999999999999999864
No 137
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.1e-33 Score=310.14 Aligned_cols=157 Identities=19% Similarity=0.183 Sum_probs=86.6
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
+|+.|+|++|.++++.|..|.++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..++. .+|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 4566666666666555555666666666666666666555556666666666666666665444443444 346666666
Q ss_pred cccccc-cCCccccCCCCccEEEeeCcccccccC-ccCCCCCCCcEEEccCCccccccchhh------------------
Q 042735 83 NNHFTG-NLRHNICRNGALERVIVGGNHFRGPIP-KCLRNCPNLVRISLEGNNMRGTISEAF------------------ 142 (667)
Q Consensus 83 ~n~l~~-~~~~~~~~~~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~~~~~~~~~~------------------ 142 (667)
+|.+++ ..+..+..+.+|+.|++++|.+.+.+| ..+.++++|++|++++|.+++..|..+
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 665554 234445555555555555555322232 345555555555555555554443333
Q ss_pred ------hcCCCCCEEECcCCccCC
Q 042735 143 ------GIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 143 ------~~l~~L~~L~L~~n~l~~ 160 (667)
..+++|++|++++|.+.+
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cchhhHhhcccccEEEccCCcccc
Confidence 345666666666666654
No 138
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-33 Score=309.22 Aligned_cols=223 Identities=24% Similarity=0.412 Sum_probs=171.2
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.+.. +..||||.+.... ...+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 3568888999999999999998765 7889999986532 124579999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++.......
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999999998864210 12349999999999999999999999987643321
Q ss_pred -CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 553 -NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 553 -~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
......+|+.|+||| |+.++|||||||++|||+| |+.||..... ..... .+........+...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~---- 444 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYE-LLEKDYRMERPEGC---- 444 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHHH-HHHTTCCCCCCTTC----
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHcCCCCCCCCCC----
Confidence 112345678999999 5779999999999999999 9999764321 11111 11111111112211
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.+|++||||.||++.|...
T Consensus 445 --~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 445 --PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 12466788899999999999999999988754
No 139
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-33 Score=293.54 Aligned_cols=228 Identities=24% Similarity=0.384 Sum_probs=171.3
Q ss_pred HcCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~ 492 (667)
.++|...+.||+|+||.||+|.. ..+..||||.+..... ....+.+.+|++++.++ +||||+++++++..
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 36788899999999999999985 2345799999875322 22345799999999999 89999999999999
Q ss_pred CCceEEEEEecCCCChHHHhccccC-----------------------------------------------Cccccccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA-----------------------------------------------AEELDISS 525 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~-----------------------------------------------~~~~dlk~ 525 (667)
.+..++||||+++|+|.+++..... ..|.||||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 200 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 9999999999999999998864321 01239999
Q ss_pred CCeeecCCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCcc
Q 042735 526 KNVLLDLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSS 596 (667)
Q Consensus 526 ~NiLld~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~ 596 (667)
+||+++.++.+||+|||+++........ .....||+.|+||| |+.++|||||||++|||+| |+.||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 9999999999999999999876543322 23456788999999 6789999999999999998 9999864321
Q ss_pred CCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 597 ILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.............+..+...+ ..+.+++.+||+.||++|||+.|++++|.....
T Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 281 ----DANFYKLIQNGFKMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp ----SHHHHHHHHTTCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----HHHHHHHHhcCCCCCCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111111111111222222111 246678889999999999999999999987543
No 140
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=285.04 Aligned_cols=226 Identities=22% Similarity=0.346 Sum_probs=168.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|....+||+|+||.||+|.. .++..||||++..... ...+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 3455667899999999999986 5578899998865321 2345789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC---------------------------CcccccccCCeeecC-CCceEEecccccccccCCC
Q 042735 500 YEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLLDL-EHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld~-~~~~kl~DFGla~~~~~~~ 551 (667)
|||+++|+|.+.+..... ..|.||||+||+++. ++.+||+|||+++......
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 999999999988754310 113399999999997 8999999999998765433
Q ss_pred CCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 SNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.......||+.|+||| ++.++|||||||++|||+||+.||...... .............+..+...+
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~-- 252 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFKVHPEIPESMS-- 252 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---HHHHHHHHHHCCCCCCCTTSC--
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---hHHHHhhccccccccccccCC--
Confidence 3344568999999999 466899999999999999999997532110 000000001111222332222
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.||++|||++|++++.|+..
T Consensus 253 ----~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 284 (295)
T 2clq_A 253 ----AEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284 (295)
T ss_dssp ----HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred ----HHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence 24667888999999999999999999988864
No 141
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.4e-33 Score=304.24 Aligned_cols=221 Identities=23% Similarity=0.411 Sum_probs=164.4
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|.+.++..||||++..... ..+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 56788889999999999999998888899999875321 23579999999999999999999999876 6789999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++....... .
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 9999999998886321 112449999999999999999999999987653321 1
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....||+.|+||| |+.++|||||||++|||+| |+.||..... ...... +........+...
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~~~~-i~~~~~~~~~~~~------ 406 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQ-VERGYRMPCPPEC------ 406 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHH-HHTTCCCCCCTTS------
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH----HHHHHH-HHcCCCCCCCCCC------
Confidence 22345788999999 6789999999999999999 9999753221 111111 1111111112111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.+|++|||++++++.|...
T Consensus 407 ~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 22466788899999999999999999988764
No 142
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-33 Score=310.34 Aligned_cols=231 Identities=20% Similarity=0.323 Sum_probs=177.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... +++.||||++....... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 57888999999999999999875 68899999986543221 22356799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeee---cCCCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+.... ...|.||||+|||+ +.++.+||+|||+++......
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 183 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK- 183 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-
Confidence 99999999988775432 12245999999999 567899999999998765433
Q ss_pred CcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 553 NWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....+||+.|+||| |+.++||||+||++|||+||+.||..... ..... .+.......+.+......
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~----~i~~~~~~~~~~~~~~~s 255 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANE----YDILK----KVEKGKYTFELPQWKKVS 255 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHHHCCCCCCSGGGGGSC
T ss_pred ccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCH----HHHHH----HHHcCCCCCCCcccccCC
Confidence 234567999999999 78899999999999999999999864321 11111 111111111112222223
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.+|++|||+.|++++.|+....
T Consensus 256 ~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 256 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 3567888999999999999999999999997654
No 143
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.1e-33 Score=287.68 Aligned_cols=227 Identities=24% Similarity=0.399 Sum_probs=173.1
Q ss_pred cCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~ 493 (667)
++|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|+++++++ +||||+++++++.++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 5788889999999999999974 3457899999865322 23456799999999999 899999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC------------------------------------------CcccccccCCeeec
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA------------------------------------------AEELDISSKNVLLD 531 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~------------------------------------------~~~~dlk~~NiLld 531 (667)
+..++||||+++|+|.+++..... ..|.||||+||+++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence 999999999999999988754321 11339999999999
Q ss_pred CCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++........ .....||+.|+||| ++.++|||||||++|||+| |+.||..... ..
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~ 255 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----DS 255 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----SH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----hh
Confidence 9999999999999876544321 23456788999999 5779999999999999999 9999763321 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..............+... ...+.+++.+||+.||++|||+.|++++|.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 256 KFYKMIKEGFRMLSPEHA------PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHHHTCCCCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCCcccC------CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111111111122112111 1246678889999999999999999999876543
No 144
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=296.68 Aligned_cols=237 Identities=16% Similarity=0.247 Sum_probs=162.7
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.||||++...... .....+.+|++++++++|||||++++++.+.+..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57888999999999999999875 6788999988643211 1112456899999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||++ |+|.+.+.... ...|.||||+||+++.++.+||+|||+++.........
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 99998 58877664321 11234999999999999999999999998765444444
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------------hhccc
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------------RLDEM 611 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------------~~~~~ 611 (667)
....||+.|+||| |+.++|||||||++|||+||+.||...........+... .....
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 5568999999999 467899999999999999999998632210000000000 00000
Q ss_pred cCCCCCCCC--CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 LDPRLPPPS--PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 ~~~~~~~~~--~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+...... .........+.+++.+||+.||++|||++|++++.||....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 000000000 00001113467888999999999999999999999997653
No 145
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-33 Score=309.81 Aligned_cols=229 Identities=21% Similarity=0.355 Sum_probs=169.6
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|...+.||+|+||.||+|+.. ++..+|||++....... .....+.+|+.++++++|||||++++++.+....++|
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46888999999999999999875 67889999986543211 1245688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecC---CCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDL---EHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~---~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+.... ...|.||||+|||++. ++.+||+|||+++......
T Consensus 115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~- 193 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK- 193 (494)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-
Confidence 99999999987664321 1224599999999976 4559999999998765432
Q ss_pred CcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 553 NWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....+||+.|+||| |+.++||||+||++|||++|+.||..... ..... .+.......+.+......
T Consensus 194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~----~i~~~~~~~~~~~~~~~s 265 (494)
T 3lij_A 194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD----QEILR----KVEKGKYTFDSPEWKNVS 265 (494)
T ss_dssp CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHHHTCCCCCSGGGTTSC
T ss_pred cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH----HHHhCCCCCCchhcccCC
Confidence 234568999999999 68899999999999999999999864321 11111 111111111111111222
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.+|++|||++|++++.|+...
T Consensus 266 ~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 356788889999999999999999999998754
No 146
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.5e-34 Score=295.48 Aligned_cols=230 Identities=23% Similarity=0.331 Sum_probs=163.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH---- 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~---- 495 (667)
++|+..+.||+|+||.||+|+. .+++.||||++...... .....+.|.+|++++++++|||||++++++.....
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT-SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC-CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 5788899999999999999986 66889999998764332 23345679999999999999999999999877554
Q ss_pred eEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 399999999999998875321 12245999999999999999999999998765432
Q ss_pred C---CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 552 S---NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 552 ~---~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
. ......||+.|+||| |+.++|||||||++|||+||+.||..... .......... ...+ +...
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~---~~~~-~~~~ 242 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP----VSVAYQHVRE---DPIP-PSAR 242 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHC---CCCC-HHHH
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcC---CCCC-cccc
Confidence 1 123457999999999 57789999999999999999999863221 0111111111 1111 0000
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.......+.+++.+||+.||++||++.+++++.++..
T Consensus 243 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0011234667888999999999999998888877754
No 147
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.7e-34 Score=304.98 Aligned_cols=234 Identities=20% Similarity=0.248 Sum_probs=162.8
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC----chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS----DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA 493 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~ 493 (667)
..++|...+.||+|+||.||+|.. .+++.||||++...... ........+.+|++++++++|||||++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 357899999999999999999976 45789999987542111 01112235889999999999999999999975 4
Q ss_pred CceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCC---CceEEeccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLE---HKAHVSDFGIAKF 546 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~---~~~kl~DFGla~~ 546 (667)
+..++||||+++|+|.+.+..... ..|.||||+|||++.+ +.+||+|||+++.
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 568999999999999887754321 2245999999999754 4599999999987
Q ss_pred ccCCCCCcccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 547 LKPDSSNWSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
..... .....+||+.|+|||+ +.++|||||||++|||+||+.||........ .... +......
T Consensus 292 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~---~~~~----i~~~~~~ 363 (419)
T 3i6u_A 292 LGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQ----ITSGKYN 363 (419)
T ss_dssp CC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC---HHHH----HHTTCCC
T ss_pred cCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH---HHHH----HhcCCCC
Confidence 65332 2345789999999994 2378999999999999999999864322111 1111 0111111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
............+.+++.+||+.||++|||++|++++.|+....
T Consensus 364 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 407 (419)
T 3i6u_A 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407 (419)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence 11111111223567888999999999999999999999987544
No 148
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-33 Score=285.70 Aligned_cols=227 Identities=25% Similarity=0.405 Sum_probs=170.2
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
+++|+..+.||+|+||.||+|... ++..+|||++..... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 578999999999999999999865 467899998753211 111224568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||++...... ..
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--~~ 164 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RR 164 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc--cc
Confidence 999999999987764321 1224599999999999999999999998654432 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....||+.|+||| ++.++||||||+++|||++|+.||..... ..... .. .......+...+ .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~-~~-~~~~~~~~~~~~------~ 232 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY----QETYK-RI-SRVEFTFPDFVT------E 232 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHH-HH-HHTCCCCCTTSC------H
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH----HHHHH-HH-HhCCCCCCCcCC------H
Confidence 3467999999999 56799999999999999999999863221 11111 11 111222222222 2
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+.+++.+||+.+|++|||+.|++++.|+....
T Consensus 233 ~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 233 GARDLISRLLKHNPSQRPMLREVLEHPWITANS 265 (279)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred HHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence 456788899999999999999999999997654
No 149
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.2e-33 Score=282.39 Aligned_cols=225 Identities=23% Similarity=0.371 Sum_probs=158.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|.... +..+|+|+..... .....+.|.+|+.++++++|||||++++++. .+..
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 578888999999999999998743 3469999876432 2334567999999999999999999999984 5678
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 99999999999998875322 11234999999999999999999999998765432
Q ss_pred C-CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 S-NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~-~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
. ......||+.|+||| |+.++|||||||++|||+| |+.||...... .... .+........+...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~-~i~~~~~~~~~~~~--- 242 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIG-RIENGERLPMPPNC--- 242 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHH-HHHTTCCCCCCTTC---
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHH-HHHcCCCCCCCCCC---
Confidence 2 123345788999999 5778999999999999997 99998643211 1111 11111111122211
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+.+++.+||+.+|++|||+.|++++|.....
T Consensus 243 ---~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 243 ---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1246678889999999999999999999887543
No 150
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-33 Score=293.56 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=167.6
Q ss_pred HHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch-HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ-IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
...++|...+.||+|+||.||+|... +++.||||++........ ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999874 588999999864322111 1112468899999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++ +|.+.+.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999999996 7877665431 1124499999999999999999999999876554
Q ss_pred CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh-------------hcc
Q 042735 551 SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR-------------LDE 610 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~-------------~~~ 610 (667)
....+..+||+.|+||| |+.++|||||||++|||++|++||...........+.... ..+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 44455678999999999 4567899999999999999999975322110000000000 000
Q ss_pred ccC-CCCCCCCCc--hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 611 MLD-PRLPPPSPD--VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 611 ~~~-~~~~~~~~~--~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+. ...+..... .......+.+++.+||+.||++|||++|++++.||...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence 000 000000000 00112357788899999999999999999999998654
No 151
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-33 Score=300.60 Aligned_cols=234 Identities=21% Similarity=0.303 Sum_probs=161.6
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC--
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR-- 494 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~-- 494 (667)
..++|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++.++. |||||++++++...+
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 357899999999999999999976 5688999999865432 2334567889999999998 999999999997654
Q ss_pred ceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCC-
Q 042735 495 HSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD- 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~- 550 (667)
..|+|||||+ |+|.+.+.... ...|.||||+|||++.++.+||+|||+|+.....
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 6899999998 58877665321 1224599999999999999999999999865321
Q ss_pred --------------------CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh
Q 042735 551 --------------------SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV 603 (667)
Q Consensus 551 --------------------~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~ 603 (667)
....+..+||+.|+||| |+.++||||+||++|||+||+.||........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---- 239 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ---- 239 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH----
Confidence 11234468999999999 57789999999999999999999863321100
Q ss_pred hhhhhccccCC------------------------------CCCCCCCchH----------HHHHHHHHHHHhccccCCC
Q 042735 604 INMRLDEMLDP------------------------------RLPPPSPDVQ----------GKLISIMEVAFSCLDVSPE 643 (667)
Q Consensus 604 ~~~~~~~~~~~------------------------------~~~~~~~~~~----------~~~~~~~~~~~~Cl~~~p~ 643 (667)
.... ...++. ......+... .....+.+++.+||+.||+
T Consensus 240 ~~~i-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 LERI-IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHH-HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHH-HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 0000 000000 0000000000 1122567888999999999
Q ss_pred CCCCHHHHHHHHHHhhh
Q 042735 644 SRPTMQTITQQLLFSLV 660 (667)
Q Consensus 644 ~RPt~~ev~~~l~~~~~ 660 (667)
+|||++|+++|.|+...
T Consensus 319 ~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 319 KRISANDALKHPFVSIF 335 (388)
T ss_dssp GSCCHHHHTTSTTTTTT
T ss_pred cCCCHHHHhCCHHHHHh
Confidence 99999999999998643
No 152
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.6e-34 Score=289.14 Aligned_cols=225 Identities=24% Similarity=0.339 Sum_probs=165.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+. .++..+|+|++...... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ---VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc---hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 5688899999999999999986 45788999987643221 2245789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccc-----c-----------------------CCcccccccCCeee---cCCCceEEeccccccccc
Q 042735 500 YEYLKRGSLATNLSND-----A-----------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~-----~-----------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~ 548 (667)
|||+++|+|.+.+... . ...|.||||+||++ +.++.+||+|||+++...
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998876421 0 11234999999999 456889999999998755
Q ss_pred CCCCCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 549 PDSSNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
... ......||+.|+||| ++.++|||||||++|||+||+.||..... ....... ....+.........
T Consensus 179 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~----~~~~~~~--~~~~~~~~~~~~~~ 251 (285)
T 3is5_A 179 SDE-HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL----EEVQQKA--TYKEPNYAVECRPL 251 (285)
T ss_dssp ---------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH--HHCCCCCCC--CCC
T ss_pred Ccc-cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCH----HHHHhhh--ccCCcccccccCcC
Confidence 432 234567999999999 57789999999999999999999863221 1111110 11111111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.||++|||++|++++.||.
T Consensus 252 ---~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~ 283 (285)
T 3is5_A 252 ---TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283 (285)
T ss_dssp ---CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred ---CHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence 12456788899999999999999999998875
No 153
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.1e-33 Score=287.42 Aligned_cols=248 Identities=27% Similarity=0.381 Sum_probs=216.1
Q ss_pred CCCCeeeccccccce--eCCCCCcc-cccCEEEccc-ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcE
Q 042735 51 SSLRYLFLFENNLSG--SIPPSVGN-LMLTVLALEN-NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVR 126 (667)
Q Consensus 51 ~~L~~L~L~~n~l~~--~~p~~~~~-~~L~~L~L~~-n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~ 126 (667)
.+++.|+|++|.+.+ .+|..+.. ..|++|+|++ |.+.+.+|..+..+++|++|++++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578889999999887 78888777 4699999985 8888888888888999999999999998888888889999999
Q ss_pred EEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCC-CCCEEEccCCcCCCCcCccccCCCCcCeeeccCCc
Q 042735 127 ISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCP-KLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNH 205 (667)
Q Consensus 127 L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 205 (667)
|+|++|.+++.+|..+..+++|++|++++|.+.+.+|..+..++ +|+.|++++|.+++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999888888888999999999999998888888888887 899999999998888888888887 9999999999
Q ss_pred ccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchh
Q 042735 206 IVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKE 285 (667)
Q Consensus 206 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~ 285 (667)
+.+..|..|..+++|+.|++++|.+.+.+|. +..+++|++|+|++|++++.+|.++..+++|+.|++++|++.+.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8888888888899999999999988866655 778889999999999998888888888899999999999988888876
Q ss_pred hhcCCCCCEEECcCCC
Q 042735 286 LGKLVQLSELELSHNF 301 (667)
Q Consensus 286 l~~l~~L~~L~l~~n~ 301 (667)
+.+++|+.|++++|+
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 778888888998887
No 154
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8e-33 Score=288.37 Aligned_cols=227 Identities=24% Similarity=0.384 Sum_probs=172.3
Q ss_pred cCCcCcceeecccCeEEEEEEeC--------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 67888999999999999999863 45679999986532 233456799999999999 8999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeeec
Q 042735 492 HARHSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLLD 531 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLld 531 (667)
+.+..++||||+++|+|.+++..... ..|.||||+||+++
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc
Confidence 99999999999999999998864321 01239999999999
Q ss_pred CCCceEEecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChh
Q 042735 532 LEHKAHVSDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPS 602 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~ 602 (667)
.++.+||+|||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||..... ..
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----EE 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HH
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH----HH
Confidence 999999999999987654322 123346788999999 5779999999999999999 9999753221 11
Q ss_pred hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 603 VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
... .+.....+..+... ...+.+++.+||+.+|++|||+.|++++|......
T Consensus 268 ~~~-~~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 268 LFK-LLKEGHRMDKPANC------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHH-HHHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HHhcCCCCCCCccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111 11111111222211 12466788899999999999999999998876543
No 155
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-33 Score=290.42 Aligned_cols=238 Identities=23% Similarity=0.346 Sum_probs=172.4
Q ss_pred CcCcceeecccCeEEEEEEeC-----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Cc
Q 042735 423 FDAKYCIGSGRHGSVYRAELP-----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA--RH 495 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~--~~ 495 (667)
|...+.||+|+||.||+|.+. +++.||||++.... .....+.|.+|++++++++|||||++++++.+. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 478889999999999998753 57789999987542 233456799999999999999999999999884 57
Q ss_pred eEEEEEecCCCChHHHhccccCC-----------------------cccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAAA-----------------------EELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~~-----------------------~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
.++||||+++|+|.+++...... .|.||||+||+++.++.+||+|||+++.......
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 89999999999999988654321 2349999999999999999999999987654332
Q ss_pred C---cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccC------CCChhhhhhhhccccCCCCC
Q 042735 553 N---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI------LPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 553 ~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 617 (667)
. .....||+.|+||| ++.++|||||||++|||+||+.||...... ..............+.....
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence 1 23456888999999 467899999999999999999997522100 00000000011111111111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccC
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYA 665 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~ 665 (667)
.+.+. .....+.+++.+||+.||++|||++|+++.|......+...
T Consensus 270 ~~~~~--~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 270 LPRPD--KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp CCCCT--TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCc--cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 11110 11235678888999999999999999999998876665533
No 156
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.2e-32 Score=306.57 Aligned_cols=310 Identities=21% Similarity=0.230 Sum_probs=249.5
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
+++.|+|++|+|+++.|.+|.++++|++|+|++|+|+++.|.+|.+|++|++|+|++|+|++..+..|.. .+|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 7899999999999988889999999999999999999888889999999999999999998766677776 569999999
Q ss_pred cccccccCCccccCCCCccEEEeeCccccc-ccCccCCCCCCCcEEEccCCccccccchhhhcC----------------
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRG-PIPKCLRNCPNLVRISLEGNNMRGTISEAFGIY---------------- 145 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l---------------- 145 (667)
+|.+++..+..+.++++|+.|++++|.+++ ..|..+..+++|++|+|++|++++..+..+..+
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999998777789999999999999999976 467888999999999999998765544332211
Q ss_pred --------------------------------------------------------------------------------
Q 042735 146 -------------------------------------------------------------------------------- 145 (667)
Q Consensus 146 -------------------------------------------------------------------------------- 145 (667)
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence
Q ss_pred -----------------------------------CCCCEEECcCCccCCccCc-------------------cCCCCCC
Q 042735 146 -----------------------------------LNLTFLDISDNNFFGEIAS-------------------NWGKCPK 171 (667)
Q Consensus 146 -----------------------------------~~L~~L~L~~n~l~~~~~~-------------------~~~~l~~ 171 (667)
..|+.|++.+|.+.+..+. .+..+++
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~ 372 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 372 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTT
T ss_pred ccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccc
Confidence 1233333333332211110 1123455
Q ss_pred CCEEEccCCcCC-------------------------------------------------CC-cCccccCCCCcCeeec
Q 042735 172 LSTLNVSMNNIT-------------------------------------------------RS-IPLEIGNLSTLNEFDL 201 (667)
Q Consensus 172 L~~L~L~~n~l~-------------------------------------------------~~-~p~~~~~l~~L~~L~L 201 (667)
|+.|++++|.+. .. .+..+.++++++.+++
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~l 452 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEEC
T ss_pred cccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 666666665542 11 1123566788899999
Q ss_pred cCCcccccCCccccCCcccceeeccccccc-ccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcc
Q 042735 202 SLNHIVGKIPKEFGKLNSLTKLILRGNQLI-GHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 202 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
+.|.+.+..+..+..+++|+.|++++|.+. +.+|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|++.+
T Consensus 453 s~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~ 532 (635)
T 4g8a_A 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532 (635)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCB
T ss_pred cccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCC
Confidence 999999888989999999999999999754 4577889999999999999999999999999999999999999999988
Q ss_pred ccchhhhcCCCCCEEECcCCCCCCcCcccccCC
Q 042735 281 ELPKELGKLVQLSELELSHNFLGREIPSQICSM 313 (667)
Q Consensus 281 ~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~ 313 (667)
..|..|..+++|++|++++|.+.+..|..+..+
T Consensus 533 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 565 (635)
T 4g8a_A 533 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 565 (635)
T ss_dssp CCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCC
T ss_pred CChhHHhCCCCCCEEECCCCcCCCCCHHHHHhh
Confidence 888899999999999999999998888777654
No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.8e-33 Score=290.80 Aligned_cols=239 Identities=19% Similarity=0.300 Sum_probs=165.2
Q ss_pred cCCcC-cceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDA-KYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~-~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
+.|.. .+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +|||||++++++.+.+..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 45666 36799999999999985 5688999999865321 2245688999999985 7999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCc---eEEecccccccccCC
Q 042735 498 LIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHK---AHVSDFGIAKFLKPD 550 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~---~kl~DFGla~~~~~~ 550 (667)
+||||+++|+|.+.+.... ...|.||||+||+++.++. +||+|||+++.....
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 9999999999988775421 1224599999999998776 999999999865422
Q ss_pred C-------CCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC---C----Chhhhh
Q 042735 551 S-------SNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL---P----SPSVIN 605 (667)
Q Consensus 551 ~-------~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~---~----~~~~~~ 605 (667)
. ......+||+.|+||| |+.++|||||||++|||+||+.||....... . ......
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 1 1123456999999999 4679999999999999999999986432110 0 000000
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.....+.......+..........+.+++.+||+.||++|||++|++++.|+.....+
T Consensus 248 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~ 305 (316)
T 2ac3_A 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305 (316)
T ss_dssp HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-----
T ss_pred HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCc
Confidence 0011111111111111001112356788899999999999999999999998765443
No 158
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-32 Score=289.74 Aligned_cols=288 Identities=18% Similarity=0.175 Sum_probs=218.8
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+.+|+.|++++|.++.+.+..|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+++..|..++. .+|+.|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 578999999999998877777888999999999999999887889999999999999999998877777776 5699999
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.++...+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++. .+..+++|+.|++++|.+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999865555568899999999999999988888899999999999999999865 35667888888888887754
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
. ...++|+.|++++|.+... |. ...++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..|..+..
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----CCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 2 2334677777777776543 22 2235677777777766543 45666777777777777776666666777
Q ss_pred CCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
+++|+.|+|++|++++ +|..+..+++|+.|++++|++. .+|..+..+++|+.|++++|.+..
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 7777777777777765 3445556667777777777644 456666667777777777776644
No 159
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-33 Score=305.25 Aligned_cols=240 Identities=20% Similarity=0.278 Sum_probs=156.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~ 494 (667)
++|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++|||||++++++... .
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE--DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc--CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 5788999999999999999976 4688999999865432 234456799999999999999999999999543 5
Q ss_pred ceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..|+||||+. |+|.+.+.... ...|.||||+|||++.++.+||+|||+|+.....
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 6899999985 68877765432 1234599999999999999999999999876422
Q ss_pred C---------------------------CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhC---------
Q 042735 551 S---------------------------SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKG--------- 587 (667)
Q Consensus 551 ~---------------------------~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG--------- 587 (667)
. ...+..+||+.|+||| |+.++|||||||++|||+||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~ 289 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGG
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccc
Confidence 1 1234567899999999 56789999999999999994
Q ss_pred --CCCCCCCccCCCCh----------------hhhhh----------------------hhccccCCCCCCCC-CchHHH
Q 042735 588 --KHPRGFVSSILPSP----------------SVINM----------------------RLDEMLDPRLPPPS-PDVQGK 626 (667)
Q Consensus 588 --~~p~~~~~~~~~~~----------------~~~~~----------------------~~~~~~~~~~~~~~-~~~~~~ 626 (667)
+++|.......... ..... .....+........ ......
T Consensus 290 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (458)
T 3rp9_A 290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS 369 (458)
T ss_dssp GCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTS
T ss_pred cccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCC
Confidence 44442211000000 00000 00000000000000 000011
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
...+.+++.+||+.||++|||++|+++|.||..+.+.
T Consensus 370 s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 370 SADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred CHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 2356788899999999999999999999999876543
No 160
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.6e-33 Score=285.45 Aligned_cols=230 Identities=20% Similarity=0.319 Sum_probs=177.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... +++.+|+|.+...... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 57888899999999999999875 4778999987543222 223456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++++|.+.+.... ...|.||||+||+++.++.+||+|||+++..........
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence 99999999988765321 112349999999999999999999999987654444445
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...||+.|+||| ++.++||||||+++|||+||+.||..... ..... .... .....+...+ ..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~-~~~~-~~~~~~~~~~------~~ 241 (294)
T 2rku_A 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYL-RIKK-NEYSIPKHIN------PV 241 (294)
T ss_dssp CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHH-HHHT-TCCCCCTTSC------HH
T ss_pred cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH-HHhh-ccCCCccccC------HH
Confidence 568999999999 56789999999999999999999863221 00000 0000 0111222111 24
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
+.+++.+||+.||++|||++|++++.|+......
T Consensus 242 ~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~ 275 (294)
T 2rku_A 242 AASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275 (294)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred HHHHHHHHcccChhhCcCHHHHhhChheecCCcC
Confidence 6678889999999999999999999999766543
No 161
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-33 Score=293.64 Aligned_cols=241 Identities=22% Similarity=0.341 Sum_probs=170.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 467888999999999999999875 488899998865432 23345678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++++|.+.+.... ...|.||||+||+++.++.+||+|||+++.........
T Consensus 102 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 181 (331)
T ss_dssp EEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred EEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc
Confidence 999999998877653221 12245999999999999999999999998765444444
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh----------------hhhhccc
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI----------------NMRLDEM 611 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~----------------~~~~~~~ 611 (667)
....||+.|+||| ++.++|||||||++|||+||+.||............. .......
T Consensus 182 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (331)
T 4aaa_A 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261 (331)
T ss_dssp --CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTC
T ss_pred CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccc
Confidence 5567999999999 4668999999999999999999986432110000000 0000000
Q ss_pred cCCCCCCCCCch---HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 612 LDPRLPPPSPDV---QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 612 ~~~~~~~~~~~~---~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
..+......+.. ......+.+++.+||+.||++|||++|++++.||....+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 315 (331)
T 4aaa_A 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315 (331)
T ss_dssp CCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGH
T ss_pred cCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCCh
Confidence 011111111000 011235778889999999999999999999999976543
No 162
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-33 Score=308.94 Aligned_cols=232 Identities=22% Similarity=0.299 Sum_probs=172.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch---------HHhHHHHHHHHHHHHhcCCCCeeEEEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ---------IADQKEFFAEIEALTKIRHRNIVKFYGF 489 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~H~niv~~~g~ 489 (667)
.++|...+.||+|+||.||+|... ++..+|||++........ ....+.+.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 367889999999999999999875 578899999865322110 1234578999999999999999999999
Q ss_pred EEeCCceEEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCC---ceEEeccc
Q 042735 490 CSHARHSILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEH---KAHVSDFG 542 (667)
Q Consensus 490 ~~~~~~~~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~---~~kl~DFG 542 (667)
+.+....++||||+++|+|.+.+.... ...|.||||+|||++.++ .+||+|||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 999999999999999999987764321 112459999999998776 69999999
Q ss_pred ccccccCCCCCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
+++...... .....+||+.|+||| |+.++||||+||++|||++|+.||..... ..... .+......
T Consensus 195 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~----~i~~~~~~ 265 (504)
T 3q5i_A 195 LSSFFSKDY-KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND----QDIIK----KVEKGKYY 265 (504)
T ss_dssp TCEECCTTS-CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHHHCCCC
T ss_pred CCEEcCCCC-ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHH----HHHcCCCC
Confidence 998765432 234568999999999 68899999999999999999999864321 11111 11111111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+.+........+.+++.+||+.||.+|||++|++++.|+...
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 1111111122356788889999999999999999999998754
No 163
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.7e-34 Score=295.04 Aligned_cols=221 Identities=20% Similarity=0.321 Sum_probs=171.4
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCch----HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQ----IADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.++|...+.||+|+||.||+|.. .++..||||++........ ....+.+.+|++++++++|||||++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46789999999999999999985 5678899998865432111 012235778999999999999999999999999
Q ss_pred ceEEEEEecCCC-ChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccC
Q 042735 495 HSILIYEYLKRG-SLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 495 ~~~lv~ey~~~g-~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
..++||||+.+| +|.+++..... ..|.||||+|||++.++.+||+|||+++....
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 999999999877 89887764321 12349999999999999999999999987654
Q ss_pred CCCCcccccccccccCCC------C-CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 550 DSSNWSALVGTYRYVAPD------Y-RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~-~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
... ....+||+.|+||| + +.++|||||||++|||+||+.||..... ........+..
T Consensus 183 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~~~~~~~- 246 (335)
T 3dls_A 183 GKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAAIHPPYL- 246 (335)
T ss_dssp TCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTCCCCSSC-
T ss_pred CCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhccCCCcc-
Confidence 332 34567999999999 2 5678999999999999999999853221 11111111111
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. ...+.+++.+||+.||++|||++|++++.|+..
T Consensus 247 ~---~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 247 V---SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp C---CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred c---CHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 1 124667888999999999999999999999854
No 164
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.8e-33 Score=308.47 Aligned_cols=230 Identities=20% Similarity=0.326 Sum_probs=173.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..||||++...... ......+.+|++++++++|||||++++++.+....++|
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 57889999999999999999874 6888999987532111 12345789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeec---CCCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLD---LEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld---~~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+.... ...|.||||+|||++ .++.+||+|||+++......
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 178 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT- 178 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC-
Confidence 99999999987664321 123459999999995 56679999999998765432
Q ss_pred CcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 553 NWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....+||+.|+||| |+.++||||+||++|||+||+.||..... ..... .+.........+......
T Consensus 179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~----~i~~~~~~~~~~~~~~~s 250 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILK----RVETGKYAFDLPQWRTIS 250 (486)
T ss_dssp ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH----HHHHTCCCSCSGGGGGSC
T ss_pred ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH----HHHhCCCCCCCcccCCCC
Confidence 234568999999999 67789999999999999999999853221 11111 111111111122222223
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.+|++|||+.|++++.|+....
T Consensus 251 ~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 3567888999999999999999999999997643
No 165
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-33 Score=284.68 Aligned_cols=232 Identities=19% Similarity=0.261 Sum_probs=170.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCch--HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQ--IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
++|+..+.||+|+||.||+|... +++.+|||.+........ ....+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999875 588999998764322111 113567999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC----ceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH----KAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~----~~kl~DFGla~~~~~ 549 (667)
+||||+++++|.+++..... ..|.||||+||+++.++ .+||+|||+++....
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 99999999999988753211 12349999999999877 899999999987644
Q ss_pred CCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 550 DSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
.. ......||+.|+||| ++.++||||||+++|||+||+.||..... .... ..+.......+....
T Consensus 165 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~---~~~~~~~~~~~~~~~ 235 (283)
T 3bhy_A 165 GN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETL---TNISAVNYDFDEEYF 235 (283)
T ss_dssp --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH---HHHHTTCCCCCHHHH
T ss_pred CC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHH---HHhHhcccCCcchhc
Confidence 32 233457999999999 56789999999999999999999853221 0000 011111111100000
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
......+.+++.+||+.||++|||++|++++.|+....
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 236 SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 11123467888899999999999999999999987543
No 166
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.7e-33 Score=289.87 Aligned_cols=233 Identities=25% Similarity=0.365 Sum_probs=172.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHh--cCCCCeeEEEEEEEeCC---
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTK--IRHRNIVKFYGFCSHAR--- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~g~~~~~~--- 494 (667)
.++|...+.||+|+||.||+|+. +++.||||++.. ...+.+.+|++++.. ++||||+++++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc-------hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 46799999999999999999988 488899999753 123568889999887 78999999999998876
Q ss_pred -ceEEEEEecCCCChHHHhccc-------------------------------cCCcccccccCCeeecCCCceEEeccc
Q 042735 495 -HSILIYEYLKRGSLATNLSND-------------------------------AAAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 495 -~~~lv~ey~~~g~L~~~l~~~-------------------------------~~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
..++||||+++|+|.+++... ....|.||||+||+++.++.+||+|||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 789999999999998876431 122355999999999999999999999
Q ss_pred ccccccCCCC----CcccccccccccCCCCC------------CCchHHHHHHHHHHHHhC----------CCCCCCCcc
Q 042735 543 IAKFLKPDSS----NWSALVGTYRYVAPDYR------------KKCDVYSFRVLALEVIKG----------KHPRGFVSS 596 (667)
Q Consensus 543 la~~~~~~~~----~~~~~~Gt~~y~aPE~~------------~~~DV~sfGvvl~ElltG----------~~p~~~~~~ 596 (667)
+++....... ......||+.|+|||.. .++|||||||++|||+|| +.||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 9987654332 12345799999999931 469999999999999999 566543221
Q ss_pred CCCChhhh-hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 597 ILPSPSVI-NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 597 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
........ .........+.++... ........+.+++.+||+.+|++|||++||+++|......
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 273 SDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 11111111 1111111222222111 1123445678899999999999999999999999876543
No 167
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.6e-33 Score=288.32 Aligned_cols=224 Identities=22% Similarity=0.377 Sum_probs=163.1
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCce----EEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEF----LAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~----~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|...+.||+|+||.||+|... ++.. +|+|.+...... ...+.+.+|+.++++++|||||++++++. .+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR---QSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC---SCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH---HHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 46888899999999999999864 4444 777876543221 11235778999999999999999999986 567
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+.+.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 889999999999998875431 1123499999999999999999999999976543
Q ss_pred CC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. ..+...||+.|+||| |+.++|||||||++|||+| |+.||...... .... ..........+...+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~~~ 243 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPD-LLEKGERLAQPQICT 243 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHH-HHHTTCBCCCCTTBC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHH-HHHcCCCCCCCCcCc
Confidence 32 234456888999999 6779999999999999999 99998643211 1111 111111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. .+.+++.+||+.+|++|||++|+++++....
T Consensus 244 ~------~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 244 I------DVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp T------TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred H------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 3556788999999999999999999987653
No 168
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.5e-33 Score=294.26 Aligned_cols=235 Identities=21% Similarity=0.323 Sum_probs=172.7
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|+..+.||+|+||.||+|... ++..+|+|++.... .....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 57888999999999999999875 67889999886542 233456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++..... ..
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 187 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 187 (360)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--C-
T ss_pred EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 99999999988765321 2335599999999999999999999999765322 12
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC--------------Ch---h---------
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP--------------SP---S--------- 602 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~--------------~~---~--------- 602 (667)
....||+.|+||| |+.++|||||||++|||+||+.||........ .+ .
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 3467999999999 56789999999999999999999853211000 00 0
Q ss_pred --------hhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 603 --------VINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 603 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
..............+..... .....+.+++.+||+.||++|||++|++++.|+.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSG--VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTT--TSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcc--cccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 00000000000000000000 01224678888999999999999999999999986543
No 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.8e-33 Score=290.88 Aligned_cols=230 Identities=20% Similarity=0.319 Sum_probs=177.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... +++.+|+|++...... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 57888999999999999999875 4678999987643221 223456789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++++|.+.+.... ...|.||||+||+++.++.+||+|||+++..........
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence 99999999988765321 112449999999999999999999999987654444445
Q ss_pred cccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 556 ALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 556 ~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
...||+.|+||| ++.++|||||||++|||+||+.||..... ..... .... ....++...+ ..
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~-~~~~-~~~~~~~~~~------~~ 267 (335)
T 2owb_A 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYL-RIKK-NEYSIPKHIN------PV 267 (335)
T ss_dssp CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHH-HHHH-TCCCCCTTSC------HH
T ss_pred ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH----HHHHH-HHhc-CCCCCCccCC------HH
Confidence 578999999999 57789999999999999999999863221 00100 0000 1112222211 24
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
+.+++.+||+.||++|||++|++++.|+...+..
T Consensus 268 ~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~ 301 (335)
T 2owb_A 268 AASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301 (335)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCccccCCCcc
Confidence 5678889999999999999999999999866543
No 170
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-33 Score=294.93 Aligned_cols=228 Identities=24% Similarity=0.398 Sum_probs=158.6
Q ss_pred CCcCcceeecccCeEEEEEEeC--CC--ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCce
Q 042735 422 DFDAKYCIGSGRHGSVYRAELP--SK--EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-ARHS 496 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~--~~--~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~~~~ 496 (667)
.|...+.||+|+||.||+|... ++ ..+|||.+.... .....+.|.+|+.++++++|||||++++++.+ .+..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 4566788999999999999763 22 358999876432 22345679999999999999999999999765 4578
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999999998864321 1234999999999999999999999998654322
Q ss_pred C----CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 552 S----NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 552 ~----~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
. ..+...||+.|+||| |+.++|||||||++|||+| |.+||...... ..... .........+...
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~~-~~~~~~~~~p~~~ 321 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVY-LLQGRRLLQPEYC 321 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHHH-HHTTCCCCCCTTC
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHHH-HHcCCCCCCCCCC
Confidence 1 123346788999999 6789999999999999999 66676533211 11111 1111111111111
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
+ ..+.+++.+||+.+|++|||++|++++|......+.
T Consensus 322 ~------~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 322 P------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred C------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 246678889999999999999999999988765543
No 171
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-33 Score=279.95 Aligned_cols=223 Identities=26% Similarity=0.437 Sum_probs=171.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|...++..+|+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 57888899999999999999998888999999875322 2356899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCC-CCc
Q 042735 501 EYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-SNW 554 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-~~~ 554 (667)
||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++...... ...
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 99999999988754311 1234999999999999999999999998654321 112
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
....||+.|+||| ++.++||||||+++|||+| |+.||..... ..... .+........+... .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~-~i~~~~~~~~~~~~------~ 231 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVE-DISTGFRLYKPRLA------S 231 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHH-HHHTTCCCCCCTTS------C
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH----HHHHH-HHhcCCcCCCCccC------c
Confidence 2346788999999 5778999999999999999 8999763221 11111 11111111111111 1
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|++|||++|++++|....
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 24667888999999999999999999987653
No 172
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.9e-33 Score=282.81 Aligned_cols=224 Identities=21% Similarity=0.354 Sum_probs=167.5
Q ss_pred CcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCceE
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH----ARHSI 497 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~----~~~~~ 497 (667)
|...+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|++++++++|||||++++++.. ....+
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 56677899999999999986 45778999987643322 2345679999999999999999999999875 35689
Q ss_pred EEEEecCCCChHHHhccc------------------------cC--CcccccccCCeeec-CCCceEEecccccccccCC
Q 042735 498 LIYEYLKRGSLATNLSND------------------------AA--AEELDISSKNVLLD-LEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~------------------------~~--~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~~ 550 (667)
+||||+++|+|.+++... .. ..|.||||+||+++ .++.+||+|||+++.....
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999998876431 12 34669999999998 8899999999999764432
Q ss_pred CCCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 551 SSNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
......||+.|+||| ++.++|||||||++|||+||+.||..... ..... ........+...+ ..
T Consensus 186 --~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~---~~~~~~~~~~~~~--~~ 254 (290)
T 1t4h_A 186 --FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIY---RRVTSGVKPASFD--KV 254 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHH---HHHTTTCCCGGGG--GC
T ss_pred --ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHH---HHHhccCCccccC--CC
Confidence 234567999999999 57899999999999999999999853221 11110 1111111111000 01
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.+|++|||++|++++.||..
T Consensus 255 ~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 1124678888999999999999999999998854
No 173
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.7e-33 Score=288.02 Aligned_cols=225 Identities=22% Similarity=0.413 Sum_probs=154.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCc----eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKE----FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|...... .||||++...... ....+.|.+|++++++++|||||++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA--SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC--HHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 57888999999999999999865432 7999998654322 23356799999999999999999999999887655
Q ss_pred ------EEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEec
Q 042735 497 ------ILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 497 ------~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~D 540 (667)
++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEee
Confidence 99999999999988774321 112349999999999999999999
Q ss_pred ccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||...... ....... ..
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~-~~ 255 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EIYNYLI-GG 255 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH-TT
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HHHHHHh-cC
Confidence 999987643321 122345788999999 6789999999999999999 89998643211 1111111 11
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.....+... ...+.+++.+||+.||++|||+.|+++.+...
T Consensus 256 ~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 256 NRLKQPPEC------MEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp CCCCCCTTC------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCcc------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111111111 12467888899999999999998888887765
No 174
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.3e-33 Score=284.23 Aligned_cols=227 Identities=25% Similarity=0.419 Sum_probs=159.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|+... .+|||++..... .....+.|.+|++++++++||||+++++++ .....++||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 468888999999999999998654 499998865433 234456799999999999999999999965 556789999
Q ss_pred EecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC--CC
Q 042735 501 EYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS--SN 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~--~~ 553 (667)
||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++...... ..
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 9999999988875321 11234999999999999999999999998654321 22
Q ss_pred cccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 554 WSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.....||+.|+||| |+.++|||||||++|||+||+.||...... .............+........
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-- 253 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVGRGSLSPDLSKVRSN-- 253 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHHHHHTSCCCCTTSSCTT--
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHHhcccccCcchhhcccc--
Confidence 33467999999999 244799999999999999999998632211 1111111111122221111111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
....+.+++.+||+.+|++|||++|+++.|...
T Consensus 254 -~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 254 -CPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 123567888899999999999999999998764
No 175
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.1e-32 Score=284.02 Aligned_cols=232 Identities=21% Similarity=0.328 Sum_probs=161.1
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.. .++..+|||++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 46788999999999999999986 56889999998653222 23445679999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccc----c------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 499 IYEYLKRGSLATNLSND----A------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~----~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
||||+++|+|.+.+... . ...|.||||+||+++.++.+||+|||+++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999998877431 0 1123499999999999999999999999876544
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
........||+.|+||| ++.++|||||||++|||+||+.||..... ..............+..+. ..
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~--~~-- 262 (310)
T 2wqm_A 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPLPS--DH-- 262 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCSCCCCT--TT--
T ss_pred CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccCCCCcc--cc--
Confidence 33334567999999999 56789999999999999999999753211 0001111111111111111 11
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+++.+||+.||++|||+.||++.+.....
T Consensus 263 -~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 263 -YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11246678889999999999999999998876543
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.3e-33 Score=303.43 Aligned_cols=236 Identities=20% Similarity=0.320 Sum_probs=165.0
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA----- 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~----- 493 (667)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++++++|||||++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 36788999999999999999976 457889999986532 1233456789999999999999999999999765
Q ss_pred -CceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 494 -RHSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
...|+||||++++ +.+.+... ....|.||||+|||++.++.+||+|||+|+.....
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 217 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred CCeEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence 3569999999876 44333211 12335699999999999999999999999876543
Q ss_pred CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhh---hhhcc
Q 042735 551 SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVIN---MRLDE 610 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~---~~~~~ 610 (667)
...+..+||+.|+||| |+.++||||+||++|||++|+.||....... +.+.... .....
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 218 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp -CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred -cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 2345578999999999 6889999999999999999999986432110 0000000 00000
Q ss_pred ccC--CCC--------------CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 611 MLD--PRL--------------PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 611 ~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+. +.. +............+.+++.+||+.||++|||++|+++|.|+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 000 000 0000011111346788999999999999999999999999974
No 177
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-32 Score=304.47 Aligned_cols=288 Identities=18% Similarity=0.178 Sum_probs=216.9
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+.+++.|++++|.++.+.+..|.++++|++|+|++|.|.+..|..|+.+++|++|+|++|.+++..|..++. .+|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 568899999999998887777888999999999999999888889999999999999999998877777776 5699999
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+++..+..+..+++|+.|++++|.+++..|..+.++++|+.|+|++|.+++.. ++.+++|+.|++++|.+.+
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 9999998766666788999999999999999888888999999999999999988653 5667788888888887754
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
. ...++|+.|++++|.+....+. + .++|+.|+|++|.+.+ +..+..+++|+.|+|++|.+.+.+|..|+.
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 2 2344667777777766543222 1 2466667777766654 345666667777777777766666666666
Q ss_pred CCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++|.+.+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 7777777777776665 3555555666777777766654 466666666677777777776654
No 178
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-32 Score=279.24 Aligned_cols=224 Identities=26% Similarity=0.400 Sum_probs=168.2
Q ss_pred CCcCcc-eeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 422 DFDAKY-CIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 422 ~f~~~~-~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
+|.... .||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 455555 8999999999999764 56779999987542 234456799999999999999999999999 556789
Q ss_pred EEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 498 LIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
+||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.......
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 99999999999998853211 11349999999999999999999999987654322
Q ss_pred C---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 553 N---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 553 ~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
. .....||+.|+||| ++.++|||||||++|||+| |+.||..... ..... .+.....+..+...+
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~-~i~~~~~~~~~~~~~- 239 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PEVMA-FIEQGKRMECPPECP- 239 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT----HHHHH-HHHTTCCCCCCTTCC-
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH----HHHHH-HHhcCCcCCCCCCcC-
Confidence 1 22345789999999 5778999999999999999 9999863321 11111 111111122222222
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.+|++||++.|++++++....
T Consensus 240 -----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 240 -----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 246678889999999999999999999877643
No 179
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.6e-33 Score=288.84 Aligned_cols=228 Identities=26% Similarity=0.408 Sum_probs=172.1
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-C-----ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-K-----EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~-----~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~ 492 (667)
.++|...+.||+|+||.||+|.... + ..||||.+.... .....+.+.+|+++++++ +|||||++++++.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3678889999999999999998643 2 369999986543 223456799999999999 89999999999999
Q ss_pred CCceEEEEEecCCCChHHHhcccc--------------------------------------CCcccccccCCeeecCCC
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA--------------------------------------AAEELDISSKNVLLDLEH 534 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------~~~~~dlk~~NiLld~~~ 534 (667)
.+..++||||+++|+|.+++.... ...|.||||+||+++.++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC
Confidence 999999999999999988775321 012349999999999999
Q ss_pred ceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhh
Q 042735 535 KAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 535 ~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 605 (667)
.+||+|||+++........ .....||+.|+||| |+.++|||||||++|||+| |+.||...... ....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~ 277 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN----SKFY 277 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS----HHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh----HHHH
Confidence 9999999999866443321 23356788999999 6789999999999999999 88897632211 1111
Q ss_pred hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 606 MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...........+...+ ..+.+++.+||+.+|++|||++||+++|.....
T Consensus 278 ~~~~~~~~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 278 KLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHHTCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCC------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1111111111222111 246678889999999999999999999876543
No 180
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-33 Score=319.89 Aligned_cols=230 Identities=21% Similarity=0.334 Sum_probs=178.5
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
..++|+..+.||+|+||.||+|+.. +++.||||++...... .....+.+.+|.+++..+ +||||+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4578999999999999999999865 5778999987642110 112235688899999987 699999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
|+||||+++|+|.+++.... ...|.||||+|||+|.++++||+|||+|+.......
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999999998876421 112449999999999999999999999996544444
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC--CCCCCCCchH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP--RLPPPSPDVQ 624 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 624 (667)
...+.+||+.||||| |+.++|||||||++|||+||+.||..... .... ..++.. .++...+
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~----~~~~----~~i~~~~~~~p~~~s--- 566 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELF----QSIMEHNVAYPKSMS--- 566 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHH----HHHHSSCCCCCTTSC---
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH----HHHH----HHHHhCCCCCCccCC---
Confidence 456789999999999 67899999999999999999999864321 1111 112222 2222211
Q ss_pred HHHHHHHHHHHhccccCCCCCCCH-----HHHHHHHHHhhhhhc
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTM-----QTITQQLLFSLVYFS 663 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~-----~ev~~~l~~~~~~~~ 663 (667)
.++.+++.+||+.||++||++ +||+++.||..+.|+
T Consensus 567 ---~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~ 607 (674)
T 3pfq_A 567 ---KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 607 (674)
T ss_dssp ---HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHH
T ss_pred ---HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHH
Confidence 246678889999999999997 999999999877664
No 181
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=286.99 Aligned_cols=226 Identities=25% Similarity=0.388 Sum_probs=169.2
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... ++..||||.+.... ..+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 467889999999999999999875 58899999986432 23468899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccc--c-----------------------CCcccccccCCeeecCCCceEEecccccccccCCCCC
Q 042735 499 IYEYLKRGSLATNLSND--A-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~--~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~ 553 (667)
||||+++|+|.+++... . ...|.||||+||+++.++.+||+|||+++........
T Consensus 102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 99999999999887521 1 1123499999999999999999999999876544333
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKL 627 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (667)
.....||+.|+||| |+.++|||||||++|||+||+.||...... ...........+.... + ....
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~--~--~~~~ 252 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFMIPTNPPPTFRK--P--ELWS 252 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSS--G--GGSC
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCCCcccCC--c--ccCC
Confidence 44567999999999 578999999999999999999998632211 0000011111111111 0 1112
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 628 ISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 628 ~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+.+++.+||+.||++|||+.|++++.|+...
T Consensus 253 ~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 253 DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 356788889999999999999999999998754
No 182
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.7e-33 Score=286.11 Aligned_cols=225 Identities=21% Similarity=0.301 Sum_probs=169.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.+|+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 57888999999999999999874 688999999864321 2234688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeee---cCCCceEEecccccccccCCCC
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~~~~ 552 (667)
|||+++|+|.+.+.... ...|.||||+||++ +.++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 99999999988764321 11244999999999 78899999999999864322
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......||+.|+||| |+.++|||||||++|||+||+.||..... ............. .+.+ .....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~--~~~~--~~~~~ 234 (304)
T 2jam_A 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKLFEKIKEGYYE--FESP--FWDDI 234 (304)
T ss_dssp TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHCCCC--CCTT--TTTTS
T ss_pred ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHcCCCC--CCcc--ccccC
Confidence 233457999999999 46689999999999999999999853221 1111111111111 1111 00111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+.+++.+||+.||++|||++|++++.|+..
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 235 SESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 234677888999999999999999999999864
No 183
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.1e-33 Score=282.19 Aligned_cols=231 Identities=24% Similarity=0.332 Sum_probs=174.1
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
..++|+..+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 3568899999999999999999875 688899998754322 123467899999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCC--
Q 042735 498 LIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-- 551 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-- 551 (667)
+||||+++|+|.+.+..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999999888764321 1234999999999999999999999998654322
Q ss_pred CCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 552 SNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
.......||+.|+|||. +.++|||||||++|||+||+.||....... . ........ ........
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~-~~~~~~~~---~~~~~~~~--- 232 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--Q-EYSDWKEK---KTYLNPWK--- 232 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--H-HHHHHHTT---CTTSTTGG---
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--H-HHHHhhhc---ccccCchh---
Confidence 12345679999999993 347999999999999999999986432110 0 00000000 00011111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.....+.+++.+||+.||++|||++|++++.|+....
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred hcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 1122466788899999999999999999999886543
No 184
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=308.55 Aligned_cols=217 Identities=25% Similarity=0.399 Sum_probs=160.0
Q ss_pred eeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.||+|+||.||+|.+. ++..||||+++.... ....+.|.+|++++++++|||||+++|++.. +..++||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~ 418 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 418 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS---STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCC
Confidence 6999999999999763 456799999875422 2235679999999999999999999999976 56899999999
Q ss_pred CCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCCCCC---ccc
Q 042735 505 RGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN---WSA 556 (667)
Q Consensus 505 ~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~---~~~ 556 (667)
+|+|.+++..... ..|.||||+|||++.++.+||+|||+++........ ...
T Consensus 419 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 419 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999998854311 123499999999999999999999999876543221 122
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..||+.|+||| |+.++|||||||++|||+| |+.||..... ...... +........+... ...
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~~~~-i~~~~~~~~p~~~------~~~ 567 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PEVMAF-IEQGKRMECPPEC------PPE 567 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS----HHHHHH-HHTTCCCCCCTTC------CHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH----HHHHHH-HHcCCCCCCCCcC------CHH
Confidence 34678999999 6789999999999999998 9999864321 111111 1111111122212 225
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
+.+++.+||+.+|++||+|.+|++.|....
T Consensus 568 l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 568 LYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 677888999999999999999998887653
No 185
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.5e-33 Score=284.10 Aligned_cols=235 Identities=21% Similarity=0.341 Sum_probs=176.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCC-----chHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPS-----DQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~ 492 (667)
.++|+..+.||+|+||.||+|... +++.||||++...... ......+.+.+|++++++++ ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468889999999999999999874 5788999998643211 11123457889999999996 9999999999999
Q ss_pred CCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEeccccccccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
.+..++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++...
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 9999999999999999988754311 1234999999999999999999999998765
Q ss_pred CCCCCcccccccccccCCC------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 549 PDSSNWSALVGTYRYVAPD------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
... ......||+.|+||| ++.++||||||+++|||+||+.||..... ...... +.....
T Consensus 176 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~----~~~~~~ 246 (298)
T 1phk_A 176 PGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ----MLMLRM----IMSGNY 246 (298)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHH----HHHTCC
T ss_pred CCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH----HHHHHH----HhcCCc
Confidence 433 234567999999998 35689999999999999999999753221 111111 111111
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
..+.+........+.+++.+||+.||++|||++|++++.|+.....+
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 293 (298)
T 1phk_A 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE 293 (298)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC--
T ss_pred ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccch
Confidence 11111111223356788889999999999999999999998765543
No 186
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.7e-32 Score=283.38 Aligned_cols=230 Identities=25% Similarity=0.402 Sum_probs=172.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCS 491 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~ 491 (667)
..++|...+.||+|+||.||+|+. .+++.||||++..... ....+.+.+|++++.++ +||||+++++++.
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 101 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACT 101 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC---cHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence 357889999999999999999974 3457899999875422 23456799999999999 6999999999998
Q ss_pred eCC-ceEEEEEecCCCChHHHhccccC----------------------------------------CcccccccCCeee
Q 042735 492 HAR-HSILIYEYLKRGSLATNLSNDAA----------------------------------------AEELDISSKNVLL 530 (667)
Q Consensus 492 ~~~-~~~lv~ey~~~g~L~~~l~~~~~----------------------------------------~~~~dlk~~NiLl 530 (667)
..+ ..++||||+++|+|.+++..... ..|.||||+||++
T Consensus 102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 181 (316)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE
Confidence 755 48999999999999998864321 1133999999999
Q ss_pred cCCCceEEecccccccccCCCCC--cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCCh
Q 042735 531 DLEHKAHVSDFGIAKFLKPDSSN--WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSP 601 (667)
Q Consensus 531 d~~~~~kl~DFGla~~~~~~~~~--~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~ 601 (667)
+.++.+||+|||+++........ .....||+.|+||| |+.++|||||||++|||+| |+.||..... ..
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~ 258 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DE 258 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC---SH
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch---hH
Confidence 99999999999999876443221 23456889999999 6789999999999999999 9999853321 11
Q ss_pred hhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 602 SVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
... ...........+...+ ..+.+++.+||+.+|++|||+.|++++|......
T Consensus 259 ~~~-~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 259 EFC-RRLKEGTRMRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHH-HHHHHTCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HHhccCccCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 111 1111111112222111 2466788899999999999999999999876543
No 187
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-32 Score=284.67 Aligned_cols=226 Identities=23% Similarity=0.412 Sum_probs=162.6
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.+|...+.||+|+||.||+|.... +..||||++.... .......|.+|++++++++|||||++++++.+.+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 356667899999999999997643 2359999986533 22345679999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 999999999999998875421 1123499999999999999999999999876543
Q ss_pred CCC---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 551 SSN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 551 ~~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
... .....||+.|+||| ++.++|||||||++|||+| |+.||..... ..... .+........+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~~~~-~~~~~~~~~~~~~~ 275 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMK-AINDGFRLPTPMDC 275 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHH-HHHTTCCCCCCTTC
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH----HHHHH-HHHCCCcCCCcccC
Confidence 221 12235688999999 5678999999999999999 9999853221 11111 11111111111111
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+.+++.+||+.+|++||++.|+++.|.....
T Consensus 276 ------~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 276 ------PSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ------BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2246678889999999999999999999876543
No 188
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.4e-33 Score=291.82 Aligned_cols=227 Identities=15% Similarity=0.185 Sum_probs=167.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 5788899999999999999986 5688999998764322 12478999999999 89999999999999999999
Q ss_pred EEEecCCCChHHHhccc--c-----------------------CCcccccccCCeeecCCCc-----eEEeccccccccc
Q 042735 499 IYEYLKRGSLATNLSND--A-----------------------AAEELDISSKNVLLDLEHK-----AHVSDFGIAKFLK 548 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~--~-----------------------~~~~~dlk~~NiLld~~~~-----~kl~DFGla~~~~ 548 (667)
||||+ +|+|.+.+... . ...|.||||+|||++.++. +||+|||+++...
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred EEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999 99999887632 1 1123499999999999887 9999999998754
Q ss_pred CCCC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 549 PDSS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 549 ~~~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
.... .....+||+.|+||| |+.++|||||||++|||+||+.||......... .... .+....
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-~~~~----~i~~~~ 236 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-ERYQ----KIGDTK 236 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-HHHH----HHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-HHHH----HHHhhh
Confidence 3322 124578999999998 577899999999999999999998643211000 0000 000000
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.+.+..........+.+++..||+.+|.+||++++|.+.+....
T Consensus 237 ~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 237 RATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 00000000000115778888999999999999999999876543
No 189
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.2e-33 Score=288.52 Aligned_cols=236 Identities=25% Similarity=0.350 Sum_probs=166.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHH--HHhcCCCCeeEEEEEEEe-----
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEA--LTKIRHRNIVKFYGFCSH----- 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~~~g~~~~----- 492 (667)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-------chhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 46888999999999999999977 5788999997531 22344455544 456899999999986643
Q ss_pred CCceEEEEEecCCCChHHHhccc-----------------------c---------CCcccccccCCeeecCCCceEEec
Q 042735 493 ARHSILIYEYLKRGSLATNLSND-----------------------A---------AAEELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~-----------------------~---------~~~~~dlk~~NiLld~~~~~kl~D 540 (667)
....++||||+++|+|.+++... . ...|.||||+|||++.++.+||+|
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 22568999999999998876421 1 334569999999999999999999
Q ss_pred ccccccccCCC--------CCcccccccccccCCCCC-------------CCchHHHHHHHHHHHHhCCCCCCCCccCCC
Q 042735 541 FGIAKFLKPDS--------SNWSALVGTYRYVAPDYR-------------KKCDVYSFRVLALEVIKGKHPRGFVSSILP 599 (667)
Q Consensus 541 FGla~~~~~~~--------~~~~~~~Gt~~y~aPE~~-------------~~~DV~sfGvvl~ElltG~~p~~~~~~~~~ 599 (667)
||+++...... ......+||+.|+|||.. .++|||||||++|||+||+.|+........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99998764321 112345799999999931 368999999999999999877532111100
Q ss_pred C-------------hhhh-hhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 600 S-------------PSVI-NMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 600 ~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
. .... .........+.++............+.+++.+||+.||++|||++|+++.|......+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 0 0000 00111122233333333323344568889999999999999999999999988765544
No 190
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.6e-33 Score=290.20 Aligned_cols=238 Identities=19% Similarity=0.258 Sum_probs=169.2
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe------
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------ 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------ 492 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++....... .....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--cchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 46889999999999999999987 568899999886543322 223468899999999999999999999987
Q ss_pred --CCceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccc
Q 042735 493 --ARHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAK 545 (667)
Q Consensus 493 --~~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~ 545 (667)
.+..++||||+++ ++.+.+.... ...|.||||+|||++.++.+||+|||+++
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 3468999999985 6655543321 11244999999999999999999999998
Q ss_pred cccCC----CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhh----------
Q 042735 546 FLKPD----SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVI---------- 604 (667)
Q Consensus 546 ~~~~~----~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~---------- 604 (667)
..... ........||+.|+||| |+.++|||||||++|||+||+.||...........+.
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 76422 12234567999999999 5678999999999999999999986322100000000
Q ss_pred -----hhhhccccCCCCCCCCCchHHH------HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 605 -----NMRLDEMLDPRLPPPSPDVQGK------LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 605 -----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.......... ........... ...+.+++.+||+.||++|||++|++++.||....
T Consensus 253 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 253 WPNVDNYELYEKLEL-VKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319 (351)
T ss_dssp STTGGGCGGGTSSCC-CSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred ccccccchhhccccc-ccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence 0000000000 00000111111 12467899999999999999999999999996543
No 191
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=294.09 Aligned_cols=235 Identities=23% Similarity=0.306 Sum_probs=172.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--ceE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR--HSI 497 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~--~~~ 497 (667)
++|...+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++|||||++++++.+.. ..+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 46888899999999999999875 488999999864221 123456889999999999999999999998765 679
Q ss_pred EEEEecCCCChHHHhccccC---------------------------CcccccccCCeee----cCCCceEEeccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLL----DLEHKAHVSDFGIAKF 546 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLl----d~~~~~kl~DFGla~~ 546 (667)
+||||+++|+|.+.+..... ..|.||||+|||+ +.++.+||+|||+++.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999998865321 1134999999999 7888899999999987
Q ss_pred ccCCCCCcccccccccccCCCC--------------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccc-
Q 042735 547 LKPDSSNWSALVGTYRYVAPDY--------------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEM- 611 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE~--------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~- 611 (667)
..... ......||+.|+|||. +.++|||||||++|||+||+.||....................
T Consensus 166 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 166 LEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred ccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 65432 2334679999999993 3478999999999999999999853221111111111100000
Q ss_pred ----------------cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 612 ----------------LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 612 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.....+............+.+++.+||+.||++|||++|+++.+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 001122222222334456778899999999999999999999887653
No 192
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.4e-33 Score=299.15 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=168.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~ 494 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++|||||++++++... .
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE--DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc--ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 5788999999999999999986 4578899999875432 234456799999999999999999999999776 5
Q ss_pred ceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..|+||||++ |+|.+.+..... ..|.||||+|||++.++.+||+|||+|+.....
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred eEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 7899999987 589887764321 123499999999999999999999999876432
Q ss_pred CC----------------------CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccC-CC-
Q 042735 551 SS----------------------NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI-LP- 599 (667)
Q Consensus 551 ~~----------------------~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~-~~- 599 (667)
.. ..+..+||+.|+||| |+.++||||+||++|||+||..|+...... .+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~ 262 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCS
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccccc
Confidence 21 135678999999999 577899999999999999976664311000 00
Q ss_pred --Chh--------------------hhh----------------------hhhccccCCCCCCCCC-chHHHHHHHHHHH
Q 042735 600 --SPS--------------------VIN----------------------MRLDEMLDPRLPPPSP-DVQGKLISIMEVA 634 (667)
Q Consensus 600 --~~~--------------------~~~----------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 634 (667)
... ... ...........+.... ........+.+++
T Consensus 263 f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl 342 (432)
T 3n9x_A 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLL 342 (432)
T ss_dssp CCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred CCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHH
Confidence 000 000 0000000000000000 0001123567888
Q ss_pred HhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 635 FSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 635 ~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.+||+.||++|||++|++++.|+..+...
T Consensus 343 ~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 371 (432)
T 3n9x_A 343 ESMLKFNPNKRITIDQALDHPYLKDVRKK 371 (432)
T ss_dssp HHHSCSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred HHHhcCCcccCCCHHHHhcChhhhhccCc
Confidence 99999999999999999999999876543
No 193
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.5e-31 Score=278.52 Aligned_cols=293 Identities=24% Similarity=0.321 Sum_probs=246.6
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+++|+.|++++|.++.+ | .+..+++|++|+|++|++++. |. +.++++|++|++++|.+++ +|. +.. .+|++|+
T Consensus 43 l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-ISA-LQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCSEEE
T ss_pred cccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-chH-HcCCCcCCEEE
Confidence 56899999999999865 4 378899999999999999864 44 9999999999999999975 443 444 5799999
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+.+..+ +..+.+|+.|++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 99999986543 8889999999999997665544 48999999999999999986544 8899999999999999875
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+. ..+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 433 7889999999999999987554 8889999999999999876443 88999999999999998753 46889
Q ss_pred CCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccc
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCE 317 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~ 317 (667)
+++|+.|++++|.+++. ..+..+++|+.|++++|++.+..|..++.+++|++|++++|.+++..| +..++.+.
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 336 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMD 336 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCS
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccc
Confidence 99999999999999875 468889999999999999988888999999999999999999977655 44444333
No 194
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.7e-33 Score=283.21 Aligned_cols=217 Identities=23% Similarity=0.374 Sum_probs=164.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-C-------ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-K-------EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH 492 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~-------~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~ 492 (667)
++|...+.||+|+||.||+|.... + ..+|+|++... .....+.|.+|++++++++|||||++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 578888999999999999997643 3 36999987542 22345679999999999999999999999999
Q ss_pred CCceEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCc--------eEEe
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHK--------AHVS 539 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~--------~kl~ 539 (667)
++..++||||+++|+|.+++..... ..|.||||+|||++.++. +||+
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999988754321 123499999999998887 9999
Q ss_pred cccccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCC-CCCCccCCCChhhhhhhhccc
Q 042735 540 DFGIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHP-RGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 540 DFGla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p-~~~~~~~~~~~~~~~~~~~~~ 611 (667)
|||+++.... .....||+.|+||| ++.++|||||||++|||+||..| +..... ....... .
T Consensus 164 Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----~~~~~~~--~ 232 (289)
T 4fvq_A 164 DPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-----QRKLQFY--E 232 (289)
T ss_dssp CCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHH--H
T ss_pred cCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----HHHHHHh--h
Confidence 9999975432 23456899999999 56789999999999999996554 332111 0000000 0
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.....+...+. .+.+++.+||+.||++|||++|++++|...
T Consensus 233 ~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~l~~l 273 (289)
T 4fvq_A 233 DRHQLPAPKAA------ELANLINNCMDYEPDHRPSFRAIIRDLNSL 273 (289)
T ss_dssp TTCCCCCCSSC------TTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCCCCCCCH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 11222222222 355778899999999999999999998765
No 195
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.3e-33 Score=291.02 Aligned_cols=229 Identities=24% Similarity=0.332 Sum_probs=168.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-----CCCeeEEEEEEEeC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-----HRNIVKFYGFCSHA 493 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~~~g~~~~~ 493 (667)
.++|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++.+++ |||||++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~ 108 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY 108 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence 46899999999999999999987 56788999998632 233456888999999997 99999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecC---------------
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDL--------------- 532 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~--------------- 532 (667)
+..++||||+ +|+|.+.+..... ..|.||||+|||++.
T Consensus 109 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 109 DHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp TEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred CeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999999 8999888754321 123499999999975
Q ss_pred ----------CCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCcc
Q 042735 533 ----------EHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSS 596 (667)
Q Consensus 533 ----------~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~ 596 (667)
++.+||+|||+++..... .....||+.|+||| |+.++|||||||++|||+||+.||.....
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 264 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH 264 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence 889999999999865432 23568999999999 68899999999999999999999863221
Q ss_pred CC----------CChhhh-hhh----hcccc-----CCCCCCCCCchHH--------------HHHHHHHHHHhccccCC
Q 042735 597 IL----------PSPSVI-NMR----LDEML-----DPRLPPPSPDVQG--------------KLISIMEVAFSCLDVSP 642 (667)
Q Consensus 597 ~~----------~~~~~~-~~~----~~~~~-----~~~~~~~~~~~~~--------------~~~~~~~~~~~Cl~~~p 642 (667)
.. +.+... ... ....+ ...++........ ....+.+++.+||+.||
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 344 (360)
T 3llt_A 265 MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP 344 (360)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence 00 000000 000 00000 0001111111000 01346689999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 042735 643 ESRPTMQTITQQLLF 657 (667)
Q Consensus 643 ~~RPt~~ev~~~l~~ 657 (667)
++|||++|++++.|+
T Consensus 345 ~~Rpta~elL~hp~f 359 (360)
T 3llt_A 345 TLRPSPAELLKHKFL 359 (360)
T ss_dssp GGSCCHHHHTTSGGG
T ss_pred hhCCCHHHHhcCccc
Confidence 999999999999886
No 196
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-32 Score=286.41 Aligned_cols=228 Identities=25% Similarity=0.369 Sum_probs=168.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--A 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~ 493 (667)
++|...+.||+|+||.||+|++ .++..||||++... .....+.+.+|++++++++||||+++++++.. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 5788889999999999999984 35778999998653 23345679999999999999999999999874 5
Q ss_pred CceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
...++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 56899999999999998875421 11234999999999999999999999998765
Q ss_pred CCCC---CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccC--------CCChh--hhhhhhc
Q 042735 549 PDSS---NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSI--------LPSPS--VINMRLD 609 (667)
Q Consensus 549 ~~~~---~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~--------~~~~~--~~~~~~~ 609 (667)
.... ......||+.|+||| |+.++|||||||++|||+||+.|+...... ..... .......
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 4332 123356888999999 567999999999999999999997421110 00000 0000011
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.......+... ...+.+++.+||+.||++|||++|++++|...
T Consensus 259 ~~~~~~~~~~~------~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 259 EGQRLPAPPAC------PAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp TTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred cccCCCCCCcc------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 22467788899999999999999999988765
No 197
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.7e-31 Score=278.08 Aligned_cols=286 Identities=21% Similarity=0.246 Sum_probs=174.9
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
+++.+++++|.++. +|..+ .++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..+.. .+|++|+|+
T Consensus 34 ~l~~l~~~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLKA-VPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCccc-cCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 46667777766664 34433 256677777777766655666677777777777777766655665655 346777777
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccc--cccchhhhcCCCCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMR--GTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~--~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+|.++ .+|..+. .+|+.|++++|.+++..+..+.++++|+.|++++|.++ +..+..+..+ +|++|++++|.+.+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 76665 3333333 56666666666666555555666666666666666664 2445555555 66666666666654
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
+|..+. ++|+.|++++|.+++..+..+.++++|+.|+|++|.+.+..+..|..+++|+.|++++|++. .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 343332 56666666666666655566666666666666666666655556666666666666666665 45556666
Q ss_pred CCCCCeeeccCCcCCccchhhhhcc------cCCCeecCCCccCc--cccchhhhcCCCCCEEECcCC
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGNL------LKLHYLDLSKYQFI--QELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~ls~n~~~--~~~p~~l~~l~~L~~L~l~~n 300 (667)
+++|+.|++++|.+++..+..+... ..|+.|++++|.+. ...|..+..+++|+.+++++|
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 6666666666666666555544432 44566666666654 445555666666666666665
No 198
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.98 E-value=1e-32 Score=280.63 Aligned_cols=226 Identities=23% Similarity=0.384 Sum_probs=172.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... ++..+|||++..... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc-chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 367889999999999999999875 567899998753210 011123568999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
||||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||++...... ..
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 169 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RR 169 (284)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--CB
T ss_pred EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc--cc
Confidence 999999999988775321 1124499999999999999999999999765432 22
Q ss_pred ccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 555 SALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 555 ~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
....||+.|+||| ++.++||||||+++|||+||+.||..... ........ ..+...+...+ .
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~-~~~~~~~~~~~------~ 237 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIV-NVDLKFPPFLS------D 237 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH-TTCCCCCTTSC------H
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHHHHh-ccccCCCCcCC------H
Confidence 3467999999999 57799999999999999999999863221 11111110 11222222222 2
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+.+++.+||+.+|++|||++|++++.|+...
T Consensus 238 ~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 45678889999999999999999999998754
No 199
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.98 E-value=2.6e-32 Score=277.19 Aligned_cols=225 Identities=22% Similarity=0.389 Sum_probs=165.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
.++|...+.||+|+||.||+|.... +..||||.+.... .....+.|.+|++++++++||||+++++++.+ +.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 4678889999999999999997533 2359999886542 22345679999999999999999999999865 45
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 789999999999988875321 1123499999999999999999999999876543
Q ss_pred CC-CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 551 SS-NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 551 ~~-~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
.. ......||+.|+||| |+.++|||||||++|||+| |+.||...... .... ..........+...+
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~~~- 240 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG-VLEKGDRLPKPDLCP- 240 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHH-HHHHTCCCCCCTTCC-
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHH-HHhcCCCCCCCCCCC-
Confidence 22 123456788999999 5778999999999999999 99998532211 1111 111111111111111
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.+|++|||+.|++++|....
T Consensus 241 -----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 241 -----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 24667888999999999999999999987653
No 200
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=9.9e-33 Score=279.44 Aligned_cols=231 Identities=23% Similarity=0.346 Sum_probs=166.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|... +++.||||++..... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 57888899999999999999875 688999998753210 0111245788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcc
Q 042735 500 YEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWS 555 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~ 555 (667)
|||+++++|.+++.... ...|.||||+||+++.++.+||+|||+++...... ...
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~ 168 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLR 168 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc-cee
Confidence 99999999988875321 11244999999999999999999999998765432 233
Q ss_pred cccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHH
Q 042735 556 ALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLI 628 (667)
Q Consensus 556 ~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (667)
...||+.|+|||. +.++||||||+++|||+||+.||..... ..... ..... ....+...+ .
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~-~~~~~-~~~~~~~~~------~ 236 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV----PTLFK-KIRGG-VFYIPEYLN------R 236 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH-HHHHC-CCCCCTTSC------H
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH----HHHHH-HhhcC-cccCchhcC------H
Confidence 4579999999993 3579999999999999999999853221 11111 11110 111121111 2
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccC
Q 042735 629 SIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYA 665 (667)
Q Consensus 629 ~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~ 665 (667)
.+.+++.+||+.||++|||++|++++.|+....-++.
T Consensus 237 ~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~~~~ 273 (276)
T 2h6d_A 237 SVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCCGGG
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhChhhccCchhcc
Confidence 4667888999999999999999999999976654443
No 201
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.98 E-value=8.1e-33 Score=284.98 Aligned_cols=227 Identities=20% Similarity=0.332 Sum_probs=164.0
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+.+|+.++++++||||+++++++...+..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 578999999999999999999875 678899998864322 122334679999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCC-CC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS-SN 553 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~-~~ 553 (667)
||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...... ..
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 999999999998875421 11234999999999999999999999998654332 12
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC-C-CCCCCCCchHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD-P-RLPPPSPDVQG 625 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 625 (667)
.....||+.|+||| ++.++||||||+++|||+||+.||...... ........... + ..++..+
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---- 262 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-----VMGAHINQAIPRPSTVRPGIP---- 262 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-----HHHHHHHSCCCCGGGTSTTCC----
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-----HHHHHhccCCCCccccCCCCC----
Confidence 23457999999999 467999999999999999999998643211 11111111100 0 0111111
Q ss_pred HHHHHHHHHHhccccCCCCCC-CHHHHHHHHHHh
Q 042735 626 KLISIMEVAFSCLDVSPESRP-TMQTITQQLLFS 658 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RP-t~~ev~~~l~~~ 658 (667)
..+.+++.+||+.||++|| |++++++.+...
T Consensus 263 --~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 263 --VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp --THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred --HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 2466788899999999999 999999988764
No 202
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.98 E-value=1.1e-32 Score=282.91 Aligned_cols=229 Identities=24% Similarity=0.360 Sum_probs=165.8
Q ss_pred cCCcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-- 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-- 493 (667)
..|+..+.||+|+||.||+|++ .+++.||||++..... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 3577888999999999999984 3578899999865322 12345789999999999999999999999876
Q ss_pred CceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
...++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++...
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 66899999999999998874321 11234999999999999999999999998765
Q ss_pred CCCC---CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCcc-----CCCCh-h-hhh---hhhc
Q 042735 549 PDSS---NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSS-----ILPSP-S-VIN---MRLD 609 (667)
Q Consensus 549 ~~~~---~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~-----~~~~~-~-~~~---~~~~ 609 (667)
.... ......||..|+||| ++.++|||||||++|||+||+.|+..... ..+.. . ... ....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 4432 123456888999999 46789999999999999999988532100 00000 0 000 0011
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.......+... ...+.+++.+||+.||++|||++|+++.|...
T Consensus 258 ~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 258 EGKRLPCPPNC------PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp TTCCCCCCTTC------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCCCCCC------CHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11111111111 12467888899999999999999999998753
No 203
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.98 E-value=1.8e-32 Score=284.13 Aligned_cols=226 Identities=19% Similarity=0.363 Sum_probs=171.1
Q ss_pred HHcCCcCcceeecccCeEEEEEEeC------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAELP------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH 492 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~ 492 (667)
..++|...+.||+|+||.||+|... .+..||||++.... .......|.+|++++++++||||+++++++.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 3467889999999999999999754 36779999986532 22345679999999999999999999999999
Q ss_pred CCceEEEEEecCCCChHHHhcccc----------------------------------CCcccccccCCeeecCCCceEE
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA----------------------------------AAEELDISSKNVLLDLEHKAHV 538 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~----------------------------------~~~~~dlk~~NiLld~~~~~kl 538 (667)
.+..++||||+++|+|.+++.... ...|.||||+||+++.++.+||
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEE
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEE
Confidence 999999999999999998775311 1123499999999999999999
Q ss_pred ecccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhc
Q 042735 539 SDFGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLD 609 (667)
Q Consensus 539 ~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 609 (667)
+|||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||..... .....
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~---- 251 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----EQVLR---- 251 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH----HHHHH----
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH----HHHHH----
Confidence 99999986543321 123346789999999 5778999999999999999 8888753221 11111
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
.+.....+...... ...+.+++.+||+.+|++|||+.|++++|...
T Consensus 252 ~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 252 FVMEGGLLDKPDNC---PDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHcCCcCCCCCCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 11111111111111 12466788899999999999999999998764
No 204
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=4.8e-32 Score=277.56 Aligned_cols=228 Identities=20% Similarity=0.311 Sum_probs=166.5
Q ss_pred CCcCcceeecccCeEEEEEEeCC-C---ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce-
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPS-K---EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS- 496 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~-~---~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~- 496 (667)
.|...+.||+|+||.||+|...+ + ..+|+|++.... .....+.|.+|++++++++|||||++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 34556789999999999997532 2 269999886532 233456799999999999999999999999876655
Q ss_pred EEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC-
Q 042735 497 ILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD- 550 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~- 550 (667)
++||||+.+|+|.+.+..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999988864211 123499999999999999999999999865432
Q ss_pred ---CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCC-CCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 551 ---SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPR-GFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 551 ---~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
........||+.|+||| ++.++|||||||++|||+||+.|+ ..... .... ...........+...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~ 253 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLT-HFLAQGRRLPQPEYC 253 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHH-HHHHTTCCCCCCTTC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHH-HHhhcCCCCCCCccc
Confidence 11223457899999999 567899999999999999966653 32111 1111 111111111111111
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
+ ..+.+++.+||+.+|++|||++|+++.+......+.
T Consensus 254 ~------~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 254 P------DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred h------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1 246678889999999999999999999987765543
No 205
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.98 E-value=8.2e-33 Score=306.01 Aligned_cols=221 Identities=23% Similarity=0.411 Sum_probs=168.8
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|.+.++..||||++..... ..+.|.+|+++|++++|||||+++|++.+ +..++||
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 56788889999999999999998888899999875321 23579999999999999999999999876 6789999
Q ss_pred EecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 501 EYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++....... .
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 9999999998886321 112449999999999999999999999987543210 1
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....||..|+||| |+.++|||||||++|||+| |+.||..... ...... +........+...
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~----~~~~~~-i~~~~~~~~~~~~------ 489 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQ-VERGYRMPCPPEC------ 489 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH----HHHHHH-HHTTCCCCCCTTC------
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHH-HHcCCCCCCCCCC------
Confidence 12345778999999 6789999999999999999 8999753221 111111 1111111112111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.+|++|||+++|++.|...
T Consensus 490 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 490 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 22466788899999999999999999988764
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.98 E-value=2.1e-33 Score=288.35 Aligned_cols=227 Identities=22% Similarity=0.371 Sum_probs=166.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
+.|+..+.||+|+||.||+|... ++..+|+|++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 57888999999999999999875 578899998864321 2346789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCc
Q 042735 500 YEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~ 554 (667)
|||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||++..........
T Consensus 95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 99999999987764311 12244999999999999999999999986432211122
Q ss_pred ccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 555 SALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
....||+.|+||| ++.++|||||||++|||+||+.|+...... .... .......+....+
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~---- 245 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLL-KIAKSDPPTLLTP---- 245 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHHHSCCCCCSSG----
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHH-HHhccCCcccCCc----
Confidence 3457999999999 356899999999999999999998643211 0100 0101111111110
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
......+.+++.+||+.||++|||++|++++.|+...
T Consensus 246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 282 (302)
T 2j7t_A 246 SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282 (302)
T ss_dssp GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred cccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence 1112356778889999999999999999999888654
No 207
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.98 E-value=2.1e-32 Score=278.81 Aligned_cols=223 Identities=25% Similarity=0.426 Sum_probs=171.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.... +..+|||++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4678888999999999999998754 7789999986432 234679999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.......
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 9999999999988754211 12349999999999999999999999987654332
Q ss_pred -CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchH
Q 042735 553 -NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQ 624 (667)
Q Consensus 553 -~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (667)
......||+.|+||| ++.++|||||||++|||+| |+.||..... .... ...........+...+
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~----~~~~-~~~~~~~~~~~~~~~~--- 238 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVY-ELLEKDYRMERPEGCP--- 238 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHH-HHHHTTCCCCCCTTCC---
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH-HHHhccCCCCCCCCCC---
Confidence 123346788999999 5779999999999999999 9999763321 1111 1111111222222221
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 625 GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 625 ~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
..+.+++.+||+.||++|||++|+++.+...
T Consensus 239 ---~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 239 ---EKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp ---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 2466788899999999999999999987654
No 208
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=5.1e-31 Score=274.20 Aligned_cols=288 Identities=20% Similarity=0.262 Sum_probs=236.2
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
+++.++++++.++. +|..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++..|..+.. .+|++|+|+
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccc-cCccC--CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 68889999999886 45544 378999999999999877778999999999999999998877888877 569999999
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCcccc--ccchhhhcCCCCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRG--TISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~--~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+|.++ .+|..+. .+|+.|++++|.+++..+..+.++++|+.|++++|.++. ..+..+..+++|++|++++|.+..
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99987 4454443 689999999999988777778899999999999998853 667788899999999999998864
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
+|..+. ++|+.|++++|.+++..|..+.++++|+.|+|++|.+.+..+..|..+++|+.|++++|.+. .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 555443 78999999999998877888999999999999999998877778888999999999999887 67888888
Q ss_pred CCCCCeeeccCCcCCccchhhhhc------ccCCCeecCCCccCcc--ccchhhhcCCCCCEEECcCCC
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGN------LLKLHYLDLSKYQFIQ--ELPKELGKLVQLSELELSHNF 301 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~ls~n~~~~--~~p~~l~~l~~L~~L~l~~n~ 301 (667)
+++|++|++++|++++..+..|.. ...|+.+++++|.+.. ..|..+..+.+++.+++++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999998876666653 3678888898888643 456778888888889888874
No 209
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=3.1e-33 Score=290.42 Aligned_cols=228 Identities=24% Similarity=0.381 Sum_probs=165.8
Q ss_pred HHHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEe---
Q 042735 418 RAINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSH--- 492 (667)
Q Consensus 418 ~~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~--- 492 (667)
...++|+..+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 3457888999999999999999987 5688999998864321 234688999999999 79999999999987
Q ss_pred ---CCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccc
Q 042735 493 ---ARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 493 ---~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
.+..++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 467899999999999998875421 112349999999999999999999999
Q ss_pred cccccCCCCCcccccccccccCCC-----------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcccc
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD-----------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEML 612 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE-----------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 612 (667)
++.............||+.|+||| ++.++|||||||++|||+||+.||...... .... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~ 250 (326)
T 2x7f_A 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALF-LIPRNP 250 (326)
T ss_dssp TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHHHSC
T ss_pred ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHH-HhhcCc
Confidence 987654333334567999999998 356899999999999999999998532211 0000 011111
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 613 DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+.... ... ...+.+++.+||+.||++|||++|++++.|+...
T Consensus 251 ~~~~~~--~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 251 APRLKS--KKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp CCCCSC--SCS---CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred cccCCc--ccc---CHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 111111 111 1246678889999999999999999999988643
No 210
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=1.3e-32 Score=280.05 Aligned_cols=220 Identities=20% Similarity=0.334 Sum_probs=166.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|... +++.||||++....... .....+.+|+..+.++ +|||||++++++.+.+..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS--HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 467899999999999999999875 68899999987543322 3356788999999999 8999999999999999999
Q ss_pred EEEEecCCCChHHHhcccc----------------------------CCcccccccCCeeecCC----------------
Q 042735 498 LIYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLDLE---------------- 533 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld~~---------------- 533 (667)
+||||+++|+|.+++.... ...|.||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 9999999999998875421 01234999999999844
Q ss_pred ---CceEEecccccccccCCCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh
Q 042735 534 ---HKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV 603 (667)
Q Consensus 534 ---~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~ 603 (667)
..+||+|||.++...... ...||+.|+|||. +.++|||||||++|||++|++|+.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~ 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-------Q 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-------H
T ss_pred CCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-------H
Confidence 479999999998765332 3469999999992 348999999999999999998753211 0
Q ss_pred hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 604 INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
... ......+..+...+ ..+.+++.+||+.||++|||+.|++++.|+..
T Consensus 237 ~~~-~~~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 285 (289)
T 1x8b_A 237 WHE-IRQGRLPRIPQVLS------QEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285 (289)
T ss_dssp HHH-HHTTCCCCCSSCCC------HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred HHH-HHcCCCCCCCcccC------HHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence 111 11111122222222 24667888999999999999999999988764
No 211
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.98 E-value=4.6e-32 Score=275.01 Aligned_cols=221 Identities=23% Similarity=0.400 Sum_probs=168.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
++|...+.||+|+||.||+|...++..+|||++..... ..+.|.+|++++++++||||+++++++. .+..++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 57888899999999999999998888899999865321 2457899999999999999999999986 45689999
Q ss_pred EecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCceEEecccccccccCCCC-C
Q 042735 501 EYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-N 553 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-~ 553 (667)
||+++|+|.+++.... . ..|.||||+||+++.++.+||+|||+++....... .
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999998876421 1 12349999999999999999999999987654321 1
Q ss_pred cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 554 WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 554 ~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
.....||+.|+||| ++.++|||||||++|||+| |+.||..... ..... ..........+...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~------ 235 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQ-NLERGYRMVRPDNC------ 235 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHH-HHHTTCCCCCCTTC------
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH----HHHHH-HHhcccCCCCcccc------
Confidence 22345788999999 5778999999999999999 8999753221 11111 11111111112111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.+|++|||+.++++.+...
T Consensus 236 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 12466788899999999999999999987654
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.98 E-value=1.5e-32 Score=290.47 Aligned_cols=235 Identities=20% Similarity=0.307 Sum_probs=161.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR----- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~----- 494 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++|||||++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 5788999999999999999976 4678899999865432 2234567899999999999999999999997665
Q ss_pred -ceEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 495 -HSILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 495 -~~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
..++||||+++ +|.+.+... ....|.||||+|||++.++.+||+|||+++......
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 181 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred cceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence 67999999985 676655321 112345999999999999999999999998654322
Q ss_pred CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh---hhccc
Q 042735 552 SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM---RLDEM 611 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~---~~~~~ 611 (667)
..+..+||+.|+||| |+.++|||||||++|||+||+.||....... +.+..... .....
T Consensus 182 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 260 (371)
T 2xrw_A 182 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260 (371)
T ss_dssp ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHH
T ss_pred -ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence 234568999999999 6889999999999999999999986432110 00000000 00000
Q ss_pred --cCCCC--------------CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 612 --LDPRL--------------PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 612 --~~~~~--------------~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
-.+.. +............+.+++.+||+.||++|||++|++++.|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 00000 0000011122346788999999999999999999999999864
No 213
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.98 E-value=2.7e-32 Score=283.49 Aligned_cols=226 Identities=24% Similarity=0.398 Sum_probs=166.9
Q ss_pred cCCcCcceeecccCeEEEEEEe------CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL------PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
++|...+.||+|+||.||+|+. .++..||||++.... .......+.+|+.++++++||||+++++++.+..
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 5788899999999999999974 346689999986432 2234567999999999999999999999999999
Q ss_pred ceEEEEEecCCCChHHHhccccC-------------------------------CcccccccCCeeecC---CCceEEec
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-------------------------------AEELDISSKNVLLDL---EHKAHVSD 540 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-------------------------------~~~~dlk~~NiLld~---~~~~kl~D 540 (667)
..++||||+++|+|.+++..... ..|.||||+||+++. +..+||+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECc
Confidence 99999999999999998864321 113399999999994 44699999
Q ss_pred ccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||..... ...... ....
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~-~~~~ 261 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLEF-VTSG 261 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHH-HHTT
T ss_pred cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH----HHHHHH-HhcC
Confidence 999986543221 223456899999999 5789999999999999999 9999753221 111111 1111
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+..+...+ ..+.+++.+||+.+|++|||+.|+++++++...
T Consensus 262 ~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 262 GRMDPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1111111111 246678889999999999999999999998754
No 214
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.98 E-value=4.9e-32 Score=277.61 Aligned_cols=229 Identities=24% Similarity=0.388 Sum_probs=165.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCCC----ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSK----EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH-ARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~----~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~-~~~ 495 (667)
..|...+.||+|+||.||+|....+ ..+|||.+.... .....+.+.+|+.++++++|||||++++++.+ .+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 4577788999999999999986432 358999886532 23345679999999999999999999999754 567
Q ss_pred eEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.....
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 8999999999999998854221 123499999999999999999999999865432
Q ss_pred C----CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhC-CCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 551 S----SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKG-KHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 551 ~----~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
. .......||+.|+||| ++.++|||||||++|||+|| .+|+...... ..... .........+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~ 256 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVY-LLQGRRLLQPEY 256 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THHHH-HHTTCCCCCCTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHHHH-HhcCCCCCCCcc
Confidence 1 1223456888999999 57799999999999999995 4554422211 11111 111111111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.+ ..+.+++.+||+.+|++|||++|+++.|......+.
T Consensus 257 ~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 257 CP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11 246678889999999999999999999988765543
No 215
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=283.29 Aligned_cols=239 Identities=22% Similarity=0.308 Sum_probs=164.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCC-chHHhHHHHHHHHHHHHhcC---CCCeeEEEEEEEeCC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPS-DQIADQKEFFAEIEALTKIR---HRNIVKFYGFCSHAR 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~---H~niv~~~g~~~~~~ 494 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++...... ........+.+|++++++++ |||||++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 56889999987532211 01111235667777776665 999999999998765
Q ss_pred -----ceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCceEEecccc
Q 042735 495 -----HSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHKAHVSDFGI 543 (667)
Q Consensus 495 -----~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~~kl~DFGl 543 (667)
..++||||+. |+|.+++..... ..|.||||+||+++.++.+||+|||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4799999998 599887754321 12349999999999999999999999
Q ss_pred cccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhh----------
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMR---------- 607 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~---------- 607 (667)
++...... ..+..+||+.|+||| |+.++|||||||++|||+||+.||...........+....
T Consensus 167 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 167 ARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred ccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 98765332 234578999999999 6889999999999999999999985322110000000000
Q ss_pred ----hccccCCCCCCCCCc-hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 608 ----LDEMLDPRLPPPSPD-VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 608 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
....+.+..+.+... .......+.+++.+||+.||++|||++|++++.|+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence 000000000000000 00112356788889999999999999999999988654
No 216
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=1.1e-32 Score=290.65 Aligned_cols=233 Identities=19% Similarity=0.266 Sum_probs=164.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR----- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~----- 494 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++|||||++++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 5688889999999999999986 5688999999865432 2334567899999999999999999999997653
Q ss_pred -ceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCC
Q 042735 495 -HSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 495 -~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
..++||||+ +++|.+.+..... ..|.||||+|||++.++.+||+|||+++.....
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 181 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc
Confidence 459999999 7899887754321 124499999999999999999999999875432
Q ss_pred CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh----------h-------
Q 042735 551 SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN----------M------- 606 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~----------~------- 606 (667)
.+..+||+.|+||| |+.++||||+||++|||+||+.||...........+.. .
T Consensus 182 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 182 ---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp ---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred ---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 34568999999998 57899999999999999999999864321100000000 0
Q ss_pred -hhccccCCCCCCCC-C-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 -RLDEMLDPRLPPPS-P-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 -~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+ +..+... . ........+.+++.+||+.||++|||++|++++.||...
T Consensus 259 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 259 KNYMKGL-PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHHS-CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHHhC-CCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000 0000000 0 000112346788889999999999999999999998754
No 217
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=7.7e-33 Score=286.95 Aligned_cols=232 Identities=21% Similarity=0.264 Sum_probs=166.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCC----chHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPS----DQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~ 494 (667)
.++|...+.||+|+||.||+|... +++.||||.+...... ........+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 367889999999999999999864 5788999998653211 11122345889999999999999999999987654
Q ss_pred ceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCc---eEEecccccccc
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHK---AHVSDFGIAKFL 547 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~---~kl~DFGla~~~ 547 (667)
.++||||+++|+|.+.+..... ..|.||||+||+++.++. +||+|||+++..
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 8999999999999887754321 123499999999987664 999999999876
Q ss_pred cCCCCCcccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 548 KPDSSNWSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 548 ~~~~~~~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
.... ......||+.|+||| |+.++|||||||++|||+||+.||........ ........ ....
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~----~~~~ 239 (322)
T 2ycf_A 168 GETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQITSG----KYNF 239 (322)
T ss_dssp CCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC---HHHHHHHT----CCCC
T ss_pred cccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH---HHHHHHhC----cccc
Confidence 4321 223467999999999 35689999999999999999999864322111 11100000 1110
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...........+.+++.+||+.||++|||++|++++.|+...
T Consensus 240 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 000001112356788889999999999999999999887643
No 218
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=9.3e-31 Score=274.24 Aligned_cols=282 Identities=26% Similarity=0.360 Sum_probs=243.1
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEc
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLAL 81 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L 81 (667)
+++|+.|++++|.++++.+ +.++++|++|+|++|.+.. + ..+.++++|++|++++|.+.+. |.......|+.|++
T Consensus 65 ~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~-~~~~~l~~L~~L~l 139 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISDI-SPLANLTKMYSLNL 139 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCC-GGGTTCTTCCEEEC
T ss_pred cCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccCc-hhhccCCceeEEEC
Confidence 6799999999999987644 8899999999999999985 3 4699999999999999999854 44323367999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
++|.....++ .+..+.+|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+.
T Consensus 140 ~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 214 (347)
T 4fmz_A 140 GANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214 (347)
T ss_dssp TTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCC
Confidence 9997655544 48889999999999999986644 8899999999999999986544 88999999999999998765
Q ss_pred cCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCC
Q 042735 162 IASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSL 241 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 241 (667)
.+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+.+. +.+..+++|+.|++++|.+.+. ..+..+
T Consensus 215 ~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 215 TP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred ch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 44 8889999999999999986544 88999999999999998763 5689999999999999999764 468899
Q ss_pred CCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 242 TKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 242 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
++|+.|++++|.+++..|..+..+++|+.|++++|++.+..| +..+++|++|++++|.++
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999999999999999999999877666 889999999999999874
No 219
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.98 E-value=2.2e-32 Score=307.64 Aligned_cols=218 Identities=26% Similarity=0.396 Sum_probs=160.5
Q ss_pred ceeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEEEec
Q 042735 427 YCIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ey~ 503 (667)
+.||+|+||.||+|.+. .+..||||+++.... .....++|.+|++++++++|||||+++|++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 47999999999999653 456899999865321 22335679999999999999999999999964 5688999999
Q ss_pred CCCChHHHhcccc------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC---Cccc
Q 042735 504 KRGSLATNLSNDA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS---NWSA 556 (667)
Q Consensus 504 ~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~---~~~~ 556 (667)
++|+|.+++.... ...|.||||+|||++.++.+||+|||+++....... ..+.
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 9999998875432 122459999999999999999999999987654332 1233
Q ss_pred ccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHH
Q 042735 557 LVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLIS 629 (667)
Q Consensus 557 ~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (667)
..||+.|+||| |+.++|||||||++|||+| |+.||..... ..... .+........+...+ ..
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~~~-~i~~~~~~~~p~~~~------~~ 600 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEVTA-MLEKGERMGCPAGCP------RE 600 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHH-HHHTTCCCCCCTTCC------HH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHHcCCCCCCCCCCC------HH
Confidence 45788999999 6789999999999999999 9999864321 11111 111111122222222 25
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 630 IMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 630 ~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
+.+++.+||+.||++|||+++|++.|...
T Consensus 601 l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 601 MYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 67788899999999999999999988754
No 220
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.98 E-value=9e-32 Score=300.06 Aligned_cols=309 Identities=23% Similarity=0.261 Sum_probs=210.2
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccce-eCCCCCcc-cccCE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSG-SIPPSVGN-LMLTV 78 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~-~~L~~ 78 (667)
++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++ ..|..++. .+|++
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 46789999999999998888888899999999999999987777778899999999999998875 34556665 45888
Q ss_pred EEcccccccccCC-ccccCCCCccEEEeeCcccccccCccCCC------------------------CCCCcEEEccCCc
Q 042735 79 LALENNHFTGNLR-HNICRNGALERVIVGGNHFRGPIPKCLRN------------------------CPNLVRISLEGNN 133 (667)
Q Consensus 79 L~L~~n~l~~~~~-~~~~~~~~L~~L~l~~n~~~~~~p~~l~~------------------------l~~L~~L~L~~n~ 133 (667)
|+|++|.+.+.++ ..+..+++|+.|++++|.+++..|..+.+ +++|+.|++++|+
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCB
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCc
Confidence 8888887444443 56777777777777777777666655543 4455555555555
Q ss_pred cccc----------------------------------------------------------------------------
Q 042735 134 MRGT---------------------------------------------------------------------------- 137 (667)
Q Consensus 134 ~~~~---------------------------------------------------------------------------- 137 (667)
+++.
T Consensus 208 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 287 (549)
T 2z81_A 208 LARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVT 287 (549)
T ss_dssp CTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEE
T ss_pred cccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccc
Confidence 5432
Q ss_pred -------------------------------------cchhh-hcCCCCCEEECcCCccCCccC---ccCCCCCCCCEEE
Q 042735 138 -------------------------------------ISEAF-GIYLNLTFLDISDNNFFGEIA---SNWGKCPKLSTLN 176 (667)
Q Consensus 138 -------------------------------------~~~~~-~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~ 176 (667)
+|..+ ..+++|++|++++|.+.+..| ..+..+++|+.|+
T Consensus 288 l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~ 367 (549)
T 2z81_A 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367 (549)
T ss_dssp EESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEE
T ss_pred ccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEE
Confidence 11111 346666666666666665543 2355666677777
Q ss_pred ccCCcCCCCcC--ccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcC
Q 042735 177 VSMNNITRSIP--LEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRF 254 (667)
Q Consensus 177 L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 254 (667)
+++|.+++..+ ..+..+++|++|++++|.+. .+|..+..+++|+.|++++|.+.. +|..+ .++|++|+|++|++
T Consensus 368 Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l 443 (549)
T 2z81_A 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNL 443 (549)
T ss_dssp CTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCC
T ss_pred ccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCCh
Confidence 77776654322 34666677777777777666 456666666777777777776652 33322 24566666666666
Q ss_pred CccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 255 SSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 255 ~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
++.+ ..+++|+.|++++|++. .+|. ...+++|++|++++|.+.+..|..+..+..+..+
T Consensus 444 ~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 502 (549)
T 2z81_A 444 DSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKI 502 (549)
T ss_dssp SCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEE
T ss_pred hhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEE
Confidence 5532 36778888888888865 6776 4678888888888888887777666655554443
No 221
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.98 E-value=3.6e-32 Score=277.62 Aligned_cols=224 Identities=25% Similarity=0.370 Sum_probs=164.4
Q ss_pred cCCcCcc-eeecccCeEEEEEEe---CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKY-CIGSGRHGSVYRAEL---PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~-~lg~g~~g~vy~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|.... .||+|+||.||+|.+ ..+..+|||++..... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 4566666 899999999999964 3357899999865422 123356799999999999999999999999 66778
Q ss_pred EEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++.......
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 999999999999988754321 12349999999999999999999999987654332
Q ss_pred C---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 553 N---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 553 ~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
. .....||+.|+||| ++.++|||||||++|||+| |+.||..... ......+.....+..+...
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~-- 245 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGC-- 245 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTC--
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCC--
Confidence 1 12345678999999 4678999999999999999 9999864321 1111111111112222212
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
...+.+++.+||+.||++|||+.|+++.|...
T Consensus 246 ----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 246 ----PREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 12466788899999999999999999887654
No 222
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.98 E-value=2e-32 Score=280.69 Aligned_cols=239 Identities=22% Similarity=0.293 Sum_probs=170.9
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL 79 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc--hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEE
Confidence 367889999999999999999875 6889999988643221 1223568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||++ |+|.+.+.... ...|.||||+||+++.++.+||+|||+++.......
T Consensus 80 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 80 VFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp EEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred EEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 999998 68887765321 112349999999999999999999999987654433
Q ss_pred CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh----------hhc--cccC
Q 042735 553 NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----------RLD--EMLD 613 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----------~~~--~~~~ 613 (667)
......||+.|+||| ++.++|||||||++|||+||+.||............... ... ....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 344567899999999 467899999999999999999998643211000000000 000 0001
Q ss_pred CCCCCCCC-ch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 614 PRLPPPSP-DV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 614 ~~~~~~~~-~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
+..+.... .. ......+.+++.+||+.||++|||++|++++.|+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCC
Confidence 11111000 00 00113567888899999999999999999999987543
No 223
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.98 E-value=7.4e-33 Score=287.66 Aligned_cols=232 Identities=17% Similarity=0.238 Sum_probs=169.2
Q ss_pred cCCcCc-ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceE
Q 042735 421 NDFDAK-YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 421 ~~f~~~-~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~ 497 (667)
+.|... +.||+|+||.||+|... +++.||||++....... .....+.+|+.++.+++ ||||+++++++.+.+..+
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~ 105 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ--DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE--ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch--HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence 345555 78999999999999865 58899999886543222 23457899999999996 699999999999999999
Q ss_pred EEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecC---CCceEEeccccccccc
Q 042735 498 LIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDL---EHKAHVSDFGIAKFLK 548 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~---~~~~kl~DFGla~~~~ 548 (667)
+||||+++|+|.+.+.... ...|.||||+||+++. ++.+||+|||+++...
T Consensus 106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 185 (327)
T 3lm5_A 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185 (327)
T ss_dssp EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence 9999999999988875321 0113499999999997 7899999999998765
Q ss_pred CCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 549 PDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
.... .....||+.|+||| |+.++|||||||++|||+||+.||...... .... ..... ....+...
T Consensus 186 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~-~i~~~-~~~~~~~~-- 256 (327)
T 3lm5_A 186 HACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ----ETYL-NISQV-NVDYSEET-- 256 (327)
T ss_dssp ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH-HHHHT-CCCCCTTT--
T ss_pred Cccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----HHHH-HHHhc-ccccCchh--
Confidence 4322 33467999999999 577999999999999999999998532210 1100 11111 11111110
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhc
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFS 663 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~ 663 (667)
.......+.+++.+||+.||++|||++|++++.|+....|.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~ 297 (327)
T 3lm5_A 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE 297 (327)
T ss_dssp TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence 01112246678889999999999999999999999766543
No 224
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.98 E-value=2.2e-32 Score=279.01 Aligned_cols=229 Identities=21% Similarity=0.345 Sum_probs=157.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++..... .....+.+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 36788999999999999999986 5688899999865432 22223344555566888999999999999999999999
Q ss_pred EEEecCCCChHHHhcc----------------------------cc-CCcccccccCCeeecCCCceEEecccccccccC
Q 042735 499 IYEYLKRGSLATNLSN----------------------------DA-AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~----------------------------~~-~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~ 549 (667)
||||+++ +|.+.+.. .. ...|.||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9999984 76554421 01 233559999999999999999999999987654
Q ss_pred CCCCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 550 DSSNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
... .....||+.|+|||. +.++|||||||++|||+||+.||..... ........... ..+..+.
T Consensus 163 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~-~~~~~~~- 236 (290)
T 3fme_A 163 DVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQVVEE-PSPQLPA- 236 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHHHHHS-CCCCCCT-
T ss_pred ccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hHHHHHHHhcc-CCCCccc-
Confidence 322 234579999999993 4578999999999999999999853211 00111111111 1111111
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.. ....+.+++.+||+.+|++|||++|++++.||....
T Consensus 237 -~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 237 -DK---FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp -TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred -cc---CCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 11 122467788899999999999999999999997554
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.98 E-value=4.2e-32 Score=275.17 Aligned_cols=219 Identities=25% Similarity=0.418 Sum_probs=160.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-CceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-RHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-~~~~l 498 (667)
.++|+..+.||+|+||.||+|+.. +..+|||.+.... ..+.|.+|++++++++|||||++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 367889999999999999999875 7789999986432 245689999999999999999999997655 47899
Q ss_pred EEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+++|+|.+++.... ...|.||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999988775321 1123499999999999999999999999865432
Q ss_pred CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHH
Q 042735 553 NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQG 625 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (667)
.....||+.|+||| ++.++||||||+++|||+| |+.||..... ..... .......+..+...
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~-~~~~~~~~~~~~~~----- 239 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVP-RVEKGYKMDAPDGC----- 239 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG----GGHHH-HHTTTCCCCCCTTC-----
T ss_pred -ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-HHhcCCCCCCcccC-----
Confidence 22346789999999 5778999999999999999 9999863321 11111 11111111222211
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 626 KLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 626 ~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
...+.+++.+||+.||++|||+.|+++.|....
T Consensus 240 -~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 240 -PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 124667888999999999999999999987764
No 226
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.98 E-value=1.4e-32 Score=289.98 Aligned_cols=237 Identities=19% Similarity=0.261 Sum_probs=170.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~ 494 (667)
++|+..+.||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++|||||++++++... .
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 47888999999999999999864 57789999986422 223446789999999999999999999999765 3
Q ss_pred ceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
..++||||++ |+|.+.+..... ..|.||||+|||++.++.+||+|||+++......
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred eEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 6899999998 588877654321 1244999999999999999999999998765332
Q ss_pred C---CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh---------------
Q 042735 552 S---NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM--------------- 606 (667)
Q Consensus 552 ~---~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~--------------- 606 (667)
. ..+..+||+.|+||| |+.++|||||||++|||+||+.||...........+...
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 1 124568999999999 577899999999999999999998643211100000000
Q ss_pred hhccc-cCCCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 607 RLDEM-LDPRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 607 ~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..... .........+. .......+.+++.+||+.||++|||++|++++.|+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 00000 00000000000 001123567888999999999999999999999997653
No 227
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.98 E-value=4.7e-32 Score=279.82 Aligned_cols=229 Identities=24% Similarity=0.355 Sum_probs=159.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR- 494 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~- 494 (667)
.++|...+.||+|+||.||+|... .+..||||++..... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 357888889999999999999753 234799999865432 2234567999999999999999999999998755
Q ss_pred ----ceEEEEEecCCCChHHHhcccc------------------------------CCcccccccCCeeecCCCceEEec
Q 042735 495 ----HSILIYEYLKRGSLATNLSNDA------------------------------AAEELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 495 ----~~~lv~ey~~~g~L~~~l~~~~------------------------------~~~~~dlk~~NiLld~~~~~kl~D 540 (667)
..++||||+++|+|.+++.... ...|.||||+||+++.++.+||+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence 3499999999999998873210 112349999999999999999999
Q ss_pred ccccccccCCCC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccc
Q 042735 541 FGIAKFLKPDSS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEM 611 (667)
Q Consensus 541 FGla~~~~~~~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 611 (667)
||+++....... ......||+.|+||| |+.++|||||||++|||+| |+.||..... ....... ...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~-~~~ 265 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN----HEMYDYL-LHG 265 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG----GGHHHHH-HTT
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH----HHHHHHH-HcC
Confidence 999987643321 123356788999999 5778999999999999999 8888753321 1111111 111
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 612 LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+..+... ...+.+++.+||+.+|++|||+.+++++|......
T Consensus 266 ~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 HRLKQPEDC------LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCCCBTTC------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCccc------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111112111 12467788899999999999999999998876543
No 228
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.98 E-value=2.5e-32 Score=284.10 Aligned_cols=234 Identities=20% Similarity=0.294 Sum_probs=170.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEe--CCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSH--ARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~--~~~~ 496 (667)
++|+..+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 6788999999999999999975 56889999998642 2356889999999998 9999999999988 6678
Q ss_pred EEEEEecCCCChHHHhccc---------------------cCCcccccccCCeeecCCC-ceEEecccccccccCCCCCc
Q 042735 497 ILIYEYLKRGSLATNLSND---------------------AAAEELDISSKNVLLDLEH-KAHVSDFGIAKFLKPDSSNW 554 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~---------------------~~~~~~dlk~~NiLld~~~-~~kl~DFGla~~~~~~~~~~ 554 (667)
++||||+++++|.+.+..- ....|.||||+|||++.++ .+||+|||+++....... .
T Consensus 109 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~ 187 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-Y 187 (330)
T ss_dssp EEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-C
T ss_pred EEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc-c
Confidence 9999999999998776431 1123459999999999776 899999999987654332 3
Q ss_pred ccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC----------CChhhhhhh----------
Q 042735 555 SALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL----------PSPSVINMR---------- 607 (667)
Q Consensus 555 ~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~----------~~~~~~~~~---------- 607 (667)
....||+.|+||| |+.++|||||||++|||+||+.||....... .........
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccc
Confidence 4567999999998 5678999999999999999999974211000 000000000
Q ss_pred hccccCCCCCC------CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 608 LDEMLDPRLPP------PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 608 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
........... ...........+.+++.+||+.||++|||++|++++.||..+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 00000000000 00000011235778889999999999999999999999987653
No 229
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=3e-32 Score=276.94 Aligned_cols=217 Identities=23% Similarity=0.335 Sum_probs=167.6
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe------
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------ 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------ 492 (667)
..+|+..+.||+|+||.||+|... +++.+|||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 357889999999999999999875 68899999986431 246789999999999999999998864
Q ss_pred ----------CCceEEEEEecCCCChHHHhcccc---C-----------------------CcccccccCCeeecCCCce
Q 042735 493 ----------ARHSILIYEYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDLEHKA 536 (667)
Q Consensus 493 ----------~~~~~lv~ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~~~~~ 536 (667)
....++||||+++|+|.+++.... . ..|.||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCE
Confidence 345799999999999999885321 0 1133999999999999999
Q ss_pred EEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhcc
Q 042735 537 HVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDE 610 (667)
Q Consensus 537 kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 610 (667)
||+|||+++....... .....||+.|+||| ++.++|||||||++|||+||+.|+.... .....
T Consensus 162 kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~~~~~ 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------KFFTD 230 (284)
T ss_dssp EECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----------HHHHH
T ss_pred EECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----------HHHHH
Confidence 9999999987654332 33457999999999 6789999999999999999998853110 00111
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 611 MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.....++...+. .+.+++.+||+.||++|||+.|++++++.....
T Consensus 231 ~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 231 LRDGIISDIFDK------KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHTTCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred hhcccccccCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 112222222221 356788899999999999999999999886543
No 230
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=4.6e-32 Score=281.52 Aligned_cols=224 Identities=21% Similarity=0.376 Sum_probs=160.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCce----EEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEF----LAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~----~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~ 495 (667)
++|+..+.||+|+||.||+|... ++.. +|+|.+..... ....+.+.+|+.++++++|||||++++++....
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS---CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 57888999999999999999864 4444 47777654322 123467999999999999999999999998764
Q ss_pred eEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 496 SILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
.++|+||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 788999999999998875421 1124499999999999999999999999876433
Q ss_pred CC--CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 551 SS--NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 551 ~~--~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. ......||+.|+||| |+.++|||||||++|||+| |+.||...... ... ...........+..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~-~~~~~~~~~~~~~~-- 243 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EIS-SILEKGERLPQPPI-- 243 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHH-HHHHTTCCCCCCTT--
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHH-HHHHcCCCCCCCcc--
Confidence 22 123345788999999 6789999999999999999 99998643211 111 11111111111111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
....+.+++.+||+.+|++|||++|+++.+....
T Consensus 244 ----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 244 ----CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1224667888999999999999999999887654
No 231
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=3.2e-32 Score=282.93 Aligned_cols=224 Identities=25% Similarity=0.370 Sum_probs=165.4
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCce--EEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEF--LAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~--~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~ 496 (667)
++|...+.||+|+||.||+|+.. ++.. +|||.+..... ....+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc---hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 67888999999999999999864 4544 48898764322 22345689999999999 899999999999999999
Q ss_pred EEEEEecCCCChHHHhcccc-----------------C-----------------------CcccccccCCeeecCCCce
Q 042735 497 ILIYEYLKRGSLATNLSNDA-----------------A-----------------------AEELDISSKNVLLDLEHKA 536 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-----------------~-----------------------~~~~dlk~~NiLld~~~~~ 536 (667)
++||||+++|+|.+++.... . ..|.||||+||+++.++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeE
Confidence 99999999999999886432 0 1133999999999999999
Q ss_pred EEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhc
Q 042735 537 HVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLD 609 (667)
Q Consensus 537 kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 609 (667)
||+|||+++...... ......+|+.|+||| |+.++|||||||++|||+| |+.||..... ........
T Consensus 182 kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~~~ 255 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLP 255 (327)
T ss_dssp EECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHGG
T ss_pred EEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHHHHhh
Confidence 999999998533221 123346788999999 5789999999999999998 9999853221 11111111
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.......+... ...+.+++.+||+.+|++|||++|++++|....
T Consensus 256 ~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 256 QGYRLEKPLNC------DDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp GTCCCCCCTTB------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCC------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111112111 124667888999999999999999999987653
No 232
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=4.6e-32 Score=277.69 Aligned_cols=229 Identities=17% Similarity=0.197 Sum_probs=169.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++++.++ +|+|++++++++.+....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 4688899999999999999985 6688999998764322 23477899999999 79999999999999999999
Q ss_pred EEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCc-----eEEeccccccccc
Q 042735 499 IYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHK-----AHVSDFGIAKFLK 548 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~-----~kl~DFGla~~~~ 548 (667)
||||+ +|+|.+++..... ..|.||||+||+++.++. +||+|||+++...
T Consensus 84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999 9999988763211 123499999999988776 9999999998765
Q ss_pred CCCC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 549 PDSS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 549 ~~~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
.... ......||+.|+||| ++.++|||||||++|||+||+.||......... ............+.
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhccCcc
Confidence 4322 134567999999999 567899999999999999999998643221110 00000000000000
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+...+ .....+.+++.+||+.+|++|||+++|++.+.....
T Consensus 242 ~~~~~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 242 LRELCA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHTT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 000000 112256788889999999999999999999877643
No 233
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=7.4e-33 Score=286.54 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=163.9
Q ss_pred cCCcCcceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE--------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCS-------- 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~-------- 491 (667)
++|...+.||+|+||.||+|.... ++.||||++... .....+.+.+|++++++++|||||++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 568888999999999999998754 889999987642 2334567999999999999999999999884
Q ss_pred ------eCCceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeec-CCCceEEecc
Q 042735 492 ------HARHSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLD-LEHKAHVSDF 541 (667)
Q Consensus 492 ------~~~~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld-~~~~~kl~DF 541 (667)
+....++||||++ |+|.+.+..... ..|.||||+||+++ .++.+||+||
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999998 689887754321 22449999999998 5679999999
Q ss_pred cccccccCCC---CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh-----
Q 042735 542 GIAKFLKPDS---SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM----- 606 (667)
Q Consensus 542 Gla~~~~~~~---~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~----- 606 (667)
|+++...... .......||+.|+||| ++.++|||||||++|||+||+.||...............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 9998764321 1223456899999999 456899999999999999999998643211000000000
Q ss_pred --hhccccC-------CCCCCCCCch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhhccCCC
Q 042735 607 --RLDEMLD-------PRLPPPSPDV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYFSYAHP 667 (667)
Q Consensus 607 --~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~~~~~~ 667 (667)
...+... .....+.... ......+.+++.+||+.||++|||++|++++.|+....++.+.|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~~~ 319 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEP 319 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-----
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccCCC
Confidence 0000000 0000000000 01123567888999999999999999999999999887775543
No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=6.1e-32 Score=280.79 Aligned_cols=227 Identities=23% Similarity=0.350 Sum_probs=151.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIE-ALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|... +++.||||++..... ......+.+|+. +++.++|||||+++|++.+.+..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 57888899999999999999874 688999999865422 233445667776 6778899999999999999999999
Q ss_pred EEEecCCCChHHHhcc------c-----------------------c-CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 499 IYEYLKRGSLATNLSN------D-----------------------A-AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~------~-----------------------~-~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
||||+++ +|.+.+.. . . ...|.||||+||+++.++.+||+|||+++...
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9999996 66554431 1 1 22345999999999999999999999998764
Q ss_pred CCCCCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccC---CC
Q 042735 549 PDSSNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLD---PR 615 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 615 (667)
... ......||+.|+|||. +.++|||||||++|||+||+.||........ ....... +.
T Consensus 178 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~~ 249 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QLTQVVKGDPPQ 249 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCCCC
T ss_pred ccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------HHHHHhcCCCCC
Confidence 332 2234579999999993 4589999999999999999999863221100 0011111 11
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
++.... ......+.+++.+||+.||++|||+.|++++.|+....
T Consensus 250 ~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 250 LSNSEE--REFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CCCCSS--CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred CCCccc--ccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 111100 01122567788899999999999999999999987543
No 235
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=1.2e-30 Score=284.68 Aligned_cols=278 Identities=27% Similarity=0.390 Sum_probs=159.0
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+++|+.|+|++|.+++..| +.++++|++|+|++|++.+..+ ++++++|++|+|++|.+++. |. +.. .+|+.|+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 4667777777777766543 6677777777777777765433 67777777777777776643 32 333 4577777
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+.+. + .+..+.+|+.|+++ |.+.+.. .+.++++|+.|++++|.+++. ..+..+++|++|++++|.+.+
T Consensus 141 l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 141 LSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp EEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc
Confidence 777766542 1 24444444444443 2222221 255666666666666666543 235666666666666666655
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
..+ +..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 285 (466)
T 1o6v_A 214 ITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 285 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTT
T ss_pred ccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccC
Confidence 433 44556666666666665542 235555666666666665554332 5555666666666665554322 555
Q ss_pred CCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 241 LTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
+++|+.|++++|++++..+ +..+++|+.|++++|++.+..| +..+++|+.|++++|.+.+
T Consensus 286 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 286 LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 5566666666665555433 4555556666666555544433 4455555555555555543
No 236
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=4.9e-33 Score=294.92 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=160.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHH---HHHHhcCCCCeeEEE-------EE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEI---EALTKIRHRNIVKFY-------GF 489 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~niv~~~-------g~ 489 (667)
++|...+.||+|+||.||+|.. .+++.||||++....... ....+.|.+|+ +++++++|||||+++ ++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 5688889999999999999986 568899999986432211 22356799999 566677899999998 77
Q ss_pred EEeCC-----------------ceEEEEEecCCCChHHHhcccc-------------------------------CCccc
Q 042735 490 CSHAR-----------------HSILIYEYLKRGSLATNLSNDA-------------------------------AAEEL 521 (667)
Q Consensus 490 ~~~~~-----------------~~~lv~ey~~~g~L~~~l~~~~-------------------------------~~~~~ 521 (667)
+.+.+ ..++||||+ +|+|.+++.... ...|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 66553 288999999 689988775311 01134
Q ss_pred ccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCC-----------------CCCCchHHHHHHHHHHH
Q 042735 522 DISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD-----------------YRKKCDVYSFRVLALEV 584 (667)
Q Consensus 522 dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE-----------------~~~~~DV~sfGvvl~El 584 (667)
||||+|||++.++.+||+|||+++.... .....+| +.|+||| |+.++|||||||++|||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 9999999999999999999999986332 3345678 9999998 34578999999999999
Q ss_pred HhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 585 IKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 585 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+||+.||......... ..... .. ...+ ..+.+++.+||+.||++|||+.|++++.||...
T Consensus 307 ltg~~Pf~~~~~~~~~--------~~~~~-~~-~~~~------~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 307 WCADLPITKDAALGGS--------EWIFR-SC-KNIP------QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHSSCCC------CCS--------GGGGS-SC-CCCC------HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHCCCCCcccccccch--------hhhhh-hc-cCCC------HHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 9999998633221111 01111 11 1111 246678889999999999999999999998753
No 237
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=4.3e-33 Score=286.02 Aligned_cols=233 Identities=27% Similarity=0.427 Sum_probs=152.9
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 36788999999999999999986 4678899998764321 1234568899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcc--------cc------------------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 499 IYEYLKRGSLATNLSN--------DA------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~--------~~------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
||||+++|+|.+.+.. .. ...|.||||+||+++.++.+||+|||+++.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999887752 00 112349999999999999999999999986
Q ss_pred ccCCCC-----CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 547 LKPDSS-----NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 547 ~~~~~~-----~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
...... ......||+.|+||| ++.++|||||||++|||+||+.||...... .......... .+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~-~~ 245 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQND-PP 245 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHTSS-CC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHHHHHhccC-CC
Confidence 543211 123457999999999 578999999999999999999998643211 0000000000 00
Q ss_pred CCCCC---CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 615 RLPPP---SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 615 ~~~~~---~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..... ..........+.+++.+||+.||++|||++|++++.||...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 00000 00000111246678889999999999999999999887643
No 238
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=4.5e-32 Score=278.85 Aligned_cols=230 Identities=19% Similarity=0.227 Sum_probs=166.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEE--eCCce
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCS--HARHS 496 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~--~~~~~ 496 (667)
.++|...+.||+|+||.||+|.. .++..+|||++............+.+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999987 4578899998864211111123467999999999999999999999984 45678
Q ss_pred EEEEEecCCCChHHHhccc---c-----------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 497 ILIYEYLKRGSLATNLSND---A-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~---~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
++||||+++| +.+.+... . ...|.||||+||+++.++.+||+|||+++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999987 54444321 0 1124499999999999999999999999876532
Q ss_pred C--CCcccccccccccCCCC--------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCC
Q 042735 551 S--SNWSALVGTYRYVAPDY--------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPS 620 (667)
Q Consensus 551 ~--~~~~~~~Gt~~y~aPE~--------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (667)
. .......||+.|+|||. +.++|||||||++|||+||+.||..... ..... .+.. .....+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~-~i~~-~~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI----YKLFE-NIGK-GSYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHH-HHHH-CCCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH----HHHHH-HHhc-CCCCCCCcc
Confidence 2 12234579999999992 3479999999999999999999863221 01111 1101 011122211
Q ss_pred CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 621 PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 621 ~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
+ ..+.+++.+||+.||++|||++|++++.|+.....
T Consensus 237 ~------~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 237 G------PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp C------HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred C------HHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 1 24567888999999999999999999999975543
No 239
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=4.1e-32 Score=289.24 Aligned_cols=232 Identities=21% Similarity=0.280 Sum_probs=164.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc-----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH----- 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~----- 495 (667)
.+|...+.||+|+||.||+|+...+..+|+|++..... ...+|++++++++|||||++++++.....
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 46888899999999999999987777799998754321 12369999999999999999999965443
Q ss_pred -eEEEEEecCCCChHHHhc----cc-----------------------cCCcccccccCCeeec-CCCceEEeccccccc
Q 042735 496 -SILIYEYLKRGSLATNLS----ND-----------------------AAAEELDISSKNVLLD-LEHKAHVSDFGIAKF 546 (667)
Q Consensus 496 -~~lv~ey~~~g~L~~~l~----~~-----------------------~~~~~~dlk~~NiLld-~~~~~kl~DFGla~~ 546 (667)
.++||||++++.+..... .. ....|.||||+|||++ .++.+||+|||+|+.
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 789999999764432211 00 1123459999999999 899999999999987
Q ss_pred ccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-----------hhhhh
Q 042735 547 LKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV-----------INMRL 608 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~-----------~~~~~ 608 (667)
...... .....||+.|+||| |+.++|||||||++|||++|+.||...........+ .....
T Consensus 192 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 192 LIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred ccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 654332 33467899999998 577899999999999999999998643211000000 00000
Q ss_pred ccccCCCCCCCCCc-hH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 609 DEMLDPRLPPPSPD-VQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 609 ~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
........+...+. .. .....+.+++.+||+.||++|||+.|+++|.||....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00111111110000 00 0123577888999999999999999999999997543
No 240
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=2.3e-32 Score=289.12 Aligned_cols=234 Identities=10% Similarity=0.003 Sum_probs=155.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc--CCCCeeEEE-------EEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI--RHRNIVKFY-------GFC 490 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~~~-------g~~ 490 (667)
.+|...+.||+|+||.||+|... +++.||||++...... .....+.+.+|+.++..+ +|||||+++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 35788899999999999999864 6889999998764332 233455678886544444 699988866 444
Q ss_pred EeC-----------------CceEEEEEecCCCChHHHhccc------c-------------------------CCcccc
Q 042735 491 SHA-----------------RHSILIYEYLKRGSLATNLSND------A-------------------------AAEELD 522 (667)
Q Consensus 491 ~~~-----------------~~~~lv~ey~~~g~L~~~l~~~------~-------------------------~~~~~d 522 (667)
... ...++||||++ |+|.+++... . ...|.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 433 23799999999 8998877531 0 011349
Q ss_pred cccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCCCCC
Q 042735 523 ISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPRGFV 594 (667)
Q Consensus 523 lk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~~~~ 594 (667)
|||+|||++.++.+||+|||+|+..... .....||+.|+||| |+.++|||||||++|||+||+.||...
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999865421 22456779999999 466899999999999999999998643
Q ss_pred ccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 595 SSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
....... ................+. .......+.+++.+||+.||++|||+.|++++.||.....
T Consensus 297 ~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 297 TPGIKGS-WKRPSLRVPGTDSLAFGS--CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp CTTCTTC-CCBCCTTSCCCCSCCCTT--SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred Ccccccc-hhhhhhhhccccccchhh--ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 2111000 000000000011111110 0011224667888999999999999999999999986654
No 241
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=1.8e-32 Score=289.05 Aligned_cols=247 Identities=18% Similarity=0.236 Sum_probs=168.1
Q ss_pred HHHHHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCc-------hHHhHHHHHHHHHHHHhcCCCCeeE
Q 042735 413 YVEIIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSD-------QIADQKEFFAEIEALTKIRHRNIVK 485 (667)
Q Consensus 413 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~ 485 (667)
..++....++|...+.||+|+||.||+|....+..||||++....... .....+.+.+|++++++++|||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456667778999999999999999999998889999999885432211 1122367999999999999999999
Q ss_pred EEEEEEeC-----CceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCc
Q 042735 486 FYGFCSHA-----RHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHK 535 (667)
Q Consensus 486 ~~g~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~ 535 (667)
+++++... ...++||||++ |+|.+.+.... ...|.||||+||+++.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND 172 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC
Confidence 99998543 35799999999 57777664321 1124499999999999999
Q ss_pred eEEecccccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh---
Q 042735 536 AHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN--- 605 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~--- 605 (667)
+||+|||+++...... ......||+.|+||| ++.++|||||||++|||+||+.||..............
T Consensus 173 ~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 251 (362)
T 3pg1_A 173 ITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251 (362)
T ss_dssp EEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 9999999998644332 234467999999999 46689999999999999999999863221000000000
Q ss_pred ------------hhhccccCCCCCC-CCCch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 606 ------------MRLDEMLDPRLPP-PSPDV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 606 ------------~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
......+...... +.... ......+.+++.+||+.||++|||++|++++.||...+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 0000000000000 00000 01123467888999999999999999999999997653
No 242
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=1.3e-32 Score=287.50 Aligned_cols=228 Identities=22% Similarity=0.368 Sum_probs=168.5
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHH-HHhcCCCCeeEEEEEEEeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEA-LTKIRHRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~~~g~~~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|.. .+++.||||++...... .....+..|+.+ ++.++|||||++++++.+.+..+
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 35788889999999999999986 56889999998754332 233456666665 77889999999999999999999
Q ss_pred EEEEecCCCChHHHhcc----c------------------------c-CCcccccccCCeeecCCCceEEeccccccccc
Q 042735 498 LIYEYLKRGSLATNLSN----D------------------------A-AAEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~----~------------------------~-~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
+||||+++ +|.+.+.. . . ...|.||||+||+++.++.+||+|||+++...
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99999985 88766532 0 1 23345999999999999999999999998764
Q ss_pred CCCCCcccccccccccCCCC----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCC
Q 042735 549 PDSSNWSALVGTYRYVAPDY----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPP 618 (667)
Q Consensus 549 ~~~~~~~~~~Gt~~y~aPE~----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (667)
... ......||+.|+|||. +.++|||||||++|||+||+.||..... ......... ....+..+.
T Consensus 206 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~---~~~~~~~~~-~~~~~~~~~ 280 (340)
T 3an0_A 206 DSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQVV-EEPSPQLPA 280 (340)
T ss_dssp CHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHHHH-HSCCCCCCG
T ss_pred ccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc---hHHHHHHHh-cCCCCCCCc
Confidence 321 1233579999999983 4579999999999999999999863211 001111111 111111111
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 619 PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
. .....+.+++.+||+.||++|||+.|++++.||....
T Consensus 281 --~---~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 318 (340)
T 3an0_A 281 --D---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318 (340)
T ss_dssp --G---GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred --c---cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence 1 1123567888899999999999999999999997544
No 243
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=2.5e-32 Score=278.19 Aligned_cols=231 Identities=20% Similarity=0.313 Sum_probs=173.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 467899999999999999999875 6888999987543221 1234578999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhcccc------------------------CCcccccccCCeeecCC---CceEEecccccccccCCC
Q 042735 499 IYEYLKRGSLATNLSNDA------------------------AAEELDISSKNVLLDLE---HKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~------------------------~~~~~dlk~~NiLld~~---~~~kl~DFGla~~~~~~~ 551 (667)
||||+++++|.+.+.... ...|.||||+||+++.+ +.+||+|||+++......
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 999999999987764321 11234999999999754 469999999998765432
Q ss_pred CCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 552 SNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
......||+.|+||| ++.++||||||+++|||+||+.||..... ....... .......+.+.....
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~ 249 (287)
T 2wei_A 179 -KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILKRV----ETGKYAFDLPQWRTI 249 (287)
T ss_dssp -SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH----HHCCCCCCSGGGTTS
T ss_pred -ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCH----HHHHHHH----HcCCCCCCchhhhhc
Confidence 223456999999999 67899999999999999999999853221 1111111 111111111111111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
...+.+++.+||+.+|++|||+.|++++.|+....
T Consensus 250 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 23567888899999999999999999999987654
No 244
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=1.4e-32 Score=289.59 Aligned_cols=234 Identities=19% Similarity=0.287 Sum_probs=153.3
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------ 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------ 493 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 5788899999999999999975 5688999999865432 233456789999999999999999999999754
Q ss_pred CceEEEEEecCCCChHHHhcccc-----------------------CCcccccccCCeeecCCCceEEecccccccccCC
Q 042735 494 RHSILIYEYLKRGSLATNLSNDA-----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~ 550 (667)
...++|+||+ +++|.+.+.... ...|.||||+|||++.++.+||+|||+++.....
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~ 185 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence 5679999999 678877654321 1234599999999999999999999999875432
Q ss_pred CCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh---------------hhh
Q 042735 551 SSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN---------------MRL 608 (667)
Q Consensus 551 ~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~---------------~~~ 608 (667)
.+..+||+.|+||| |+.++||||+||++|||+||+.||...........+.. ...
T Consensus 186 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 262 (367)
T 2fst_X 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHH
T ss_pred ---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 34568999999999 56789999999999999999999864321100000000 000
Q ss_pred ccccC--CCCCCCCCc--hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 609 DEMLD--PRLPPPSPD--VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 609 ~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+. +..+..... .......+.+++.+||+.||++|||++|++++.|+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318 (367)
T ss_dssp HHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence 00000 000100000 00011346788899999999999999999999998754
No 245
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=9e-31 Score=272.32 Aligned_cols=269 Identities=20% Similarity=0.240 Sum_probs=238.0
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|+|++|.++++.+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. .+|+.|+++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~~L~~L~l~ 129 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP-KTLQELRVH 129 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC-TTCCEEECC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc-ccccEEECC
Confidence 57899999999999988889999999999999999999888999999999999999999998 5666554 579999999
Q ss_pred cccccccCCccccCCCCccEEEeeCccccc--ccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRG--PIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~--~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+|.+++..+..+..+.+|+.|++++|.+.. ..+..+.++++|+.|++++|.++.. |..+ .++|++|++++|.+.+
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~--~~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGL--PPSLTELHLDGNKITK 206 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSC--CTTCSEEECTTSCCCE
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC-Cccc--cccCCEEECCCCcCCc
Confidence 999998888889999999999999999964 6778899999999999999999864 4333 3899999999999998
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
..+..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|.+. .+|..+..+++|+.|++++|++++..+..|..
T Consensus 207 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~ 285 (330)
T 1xku_A 207 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285 (330)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCC
Confidence 88899999999999999999999888878999999999999999998 67888999999999999999998777666653
Q ss_pred ------CCCCCeeeccCCcCCc--cchhhhhcccCCCeecCCCcc
Q 042735 241 ------LTKLEFLNLSTNRFSS--LIPESLGNLLKLHYLDLSKYQ 277 (667)
Q Consensus 241 ------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~n~ 277 (667)
.+.|+.|++++|.+.. ..|..|..+..|+.+++++|+
T Consensus 286 ~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3789999999999864 567889999999999999884
No 246
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=3.1e-32 Score=279.45 Aligned_cols=225 Identities=23% Similarity=0.417 Sum_probs=160.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe------
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------ 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------ 492 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 46789999999999999999986 4688999998853 22345679999999999999999999999865
Q ss_pred -------CCceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEec
Q 042735 493 -------ARHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSD 540 (667)
Q Consensus 493 -------~~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~D 540 (667)
....++||||+++|+|.+.+.... ...|.||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence 356899999999999998885321 112349999999999999999999
Q ss_pred ccccccccCCC--------------CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC
Q 042735 541 FGIAKFLKPDS--------------SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP 599 (667)
Q Consensus 541 FGla~~~~~~~--------------~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~ 599 (667)
||+++...... .......||+.|+||| ++.++|||||||++|||+| |+.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--- 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--- 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH---
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh---
Confidence 99998654221 1223457999999998 4678999999999999998 4321100
Q ss_pred ChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 600 SPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..... ..... .....++..+. .....+.+++.+||+.||++|||++|++++.|+..
T Consensus 234 ~~~~~-~~~~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 234 RVNIL-KKLRS-VSIEFPPDFDD--NKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp HHHHH-HHHHS-TTCCCCTTCCT--TTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred HHHHH-Hhccc-cccccCccccc--cchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 00000 00111 11122221111 11234567888999999999999999999988854
No 247
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=5.1e-32 Score=285.31 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=160.8
Q ss_pred HHHHHHHcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 042735 414 VEIIRAINDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH 492 (667)
Q Consensus 414 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~ 492 (667)
.+....+++|...+.||+|+||.||+|+.. ++..||||++..... ....+.+|++.+++++|||||++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-----FRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-----CCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-----ccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 345667899999999999999999999874 578999998754321 12346778888999999999999999976
Q ss_pred CCc-------eEEEEEecCCCChHH---H-------------------------hcc-ccCCcccccccCCeeecC-CCc
Q 042735 493 ARH-------SILIYEYLKRGSLAT---N-------------------------LSN-DAAAEELDISSKNVLLDL-EHK 535 (667)
Q Consensus 493 ~~~-------~~lv~ey~~~g~L~~---~-------------------------l~~-~~~~~~~dlk~~NiLld~-~~~ 535 (667)
.+. .++||||++++.+.. . ++. .....|.||||+|||++. ++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred cccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence 443 789999999753211 1 110 122345699999999996 899
Q ss_pred eEEecccccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh--
Q 042735 536 AHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM-- 606 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~-- 606 (667)
+||+|||+++....... .....||+.|+||| |+.++|||||||++|||+||+.||...............
T Consensus 171 ~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp EEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred EEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 99999999987654332 33467999999999 567899999999999999999998643211000000000
Q ss_pred ----hhccccCCCCC-------CCCC-------chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 607 ----RLDEMLDPRLP-------PPSP-------DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 607 ----~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
.....+++... ...+ ........+.+++.+||+.||++|||+.|++++.||.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 00000000000 0000 00012345778999999999999999999999999986643
No 248
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=288.29 Aligned_cols=235 Identities=18% Similarity=0.190 Sum_probs=161.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC----CCceEEEEecCCCCCCchH-------HhHHHHHHHHHHHHhcCCCCeeEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP----SKEFLAVKKFNSPLPSDQI-------ADQKEFFAEIEALTKIRHRNIVKFYGF 489 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~----~~~~~avk~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~~~g~ 489 (667)
++|...+.||+|+||.||+|... .+..+|||+.......... ...+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999875 5678999988654221100 012347788999999999999999999
Q ss_pred EEe----CCceEEEEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCC--ceEEe
Q 042735 490 CSH----ARHSILIYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEH--KAHVS 539 (667)
Q Consensus 490 ~~~----~~~~~lv~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~--~~kl~ 539 (667)
+.. ....++||||+ +|+|.+++..... ..|.||||+|||++.++ .+||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence 988 67899999999 9999988764321 12349999999999887 99999
Q ss_pred cccccccccCCC-------CCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh
Q 042735 540 DFGIAKFLKPDS-------SNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM 606 (667)
Q Consensus 540 DFGla~~~~~~~-------~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 606 (667)
|||+++...... .......||+.|+||| |+.++|||||||++|||+||+.||..... .......
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---~~~~~~~ 272 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK---DPVAVQT 272 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT---CHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc---ccHHHHH
Confidence 999998764321 1124567999999999 57799999999999999999999842110 1110000
Q ss_pred hhccccCCCCCCCCCc---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 607 RLDEMLDPRLPPPSPD---VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 607 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.... ....++..... .......+.+++.+||+.+|++|||+++|++.|.....
T Consensus 273 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTN-LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHH-HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHh-hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 0000 00111100000 00112256778889999999999999999999876543
No 249
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=1.5e-32 Score=289.76 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=163.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeCC------CceEEEEecCCCCCCchH-------HhHHHHHHHHHHHHhcCCCCeeEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPS------KEFLAVKKFNSPLPSDQI-------ADQKEFFAEIEALTKIRHRNIVKF 486 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~------~~~~avk~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~~ 486 (667)
.++|...+.||+|+||.||+|.... +..||||++......... .....+.+|+..+++++|||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3578899999999999999998755 367999987653210000 001234456667788899999999
Q ss_pred EEEEEeC----CceEEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeec--CCCc
Q 042735 487 YGFCSHA----RHSILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLD--LEHK 535 (667)
Q Consensus 487 ~g~~~~~----~~~~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld--~~~~ 535 (667)
++++... ...++||||+ +|+|.+.+.... ...|.||||+|||++ .++.
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence 9999775 4589999999 999998875431 112449999999999 8999
Q ss_pred eEEecccccccccCCCC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChh
Q 042735 536 AHVSDFGIAKFLKPDSS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPS 602 (667)
Q Consensus 536 ~kl~DFGla~~~~~~~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~ 602 (667)
+||+|||+++....... .....+||+.|+||| |+.++|||||||++|||+||+.||...........
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 99999999987543211 123456999999999 57789999999999999999999863211000000
Q ss_pred hhh----hhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 603 VIN----MRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 603 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
... ......+++.++.. .....+.+++..||+.+|++||++++|++.+.....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 273 DSKIRYRENIASLMDKCFPAA-----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHHHCHHHHHHHHSCTT-----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHhcccc-----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 000 01111111111110 011246778889999999999999999998876543
No 250
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=5.3e-32 Score=284.38 Aligned_cols=237 Identities=20% Similarity=0.267 Sum_probs=168.5
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA-----R 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~-----~ 494 (667)
++|...+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 57888999999999999999875 58889999986422 233456788999999999999999999998764 6
Q ss_pred ceEEEEEecCCCChHHHhccccC-----------------------CcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 495 HSILIYEYLKRGSLATNLSNDAA-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~~l~~~~~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
..++||||++ |+|.+.+..... ..|.||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred eEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 7899999998 588876654221 2245999999999999999999999998764321
Q ss_pred C----------CcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-----------
Q 042735 552 S----------NWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV----------- 603 (667)
Q Consensus 552 ~----------~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~----------- 603 (667)
. .....+||+.|+||| ++.++|||||||++|||++|+.||............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence 1 122357899999999 456899999999999999999998643210000000
Q ss_pred -----hhhhhccccC--CCCCCCCCc--hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 604 -----INMRLDEMLD--PRLPPPSPD--VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 604 -----~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
......+.+. +..+..... .......+.+++.+||+.||++|||++|++++.|+....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000000000 000000000 001123467888999999999999999999999997644
No 251
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.1e-32 Score=281.25 Aligned_cols=232 Identities=27% Similarity=0.383 Sum_probs=168.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-----CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-----PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHAR- 494 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~- 494 (667)
.+|...+.||+|+||.||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 4678889999999999999984 357889999986532 234567999999999999999999999987654
Q ss_pred -ceEEEEEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEeccccccccc
Q 042735 495 -HSILIYEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLK 548 (667)
Q Consensus 495 -~~~lv~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~ 548 (667)
..++||||+++|+|.+++..... ..|.||||+||+++.++.+||+|||+++...
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 78999999999999988864321 1133999999999999999999999998765
Q ss_pred CCCCC---cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCcc-------CCCChhhhhhhhcccc
Q 042735 549 PDSSN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSS-------ILPSPSVINMRLDEML 612 (667)
Q Consensus 549 ~~~~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~-------~~~~~~~~~~~~~~~~ 612 (667)
..... .....||..|+||| ++.++|||||||++|||+||+.|+..... ...........+.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 44321 22345788899999 46789999999999999999988642100 0000000000000111
Q ss_pred C--CCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 613 D--PRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 613 ~--~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. ...+.+ .. ....+.+++.+||+.+|++|||+.|+++.|.....
T Consensus 277 ~~~~~~~~~-~~---~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 277 KNNGRLPRP-DG---CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HTTCCCCCC-TT---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCCCCC-Cc---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111111 11 12356778889999999999999999999887654
No 252
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=8.3e-31 Score=272.83 Aligned_cols=268 Identities=19% Similarity=0.247 Sum_probs=238.2
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|+|++|.++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. .+|+.|+|+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-~~L~~L~l~ 131 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP-SSLVELRIH 131 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC-TTCCEEECC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc-ccCCEEECC
Confidence 57999999999999988889999999999999999999888999999999999999999998 5666555 679999999
Q ss_pred cccccccCCccccCCCCccEEEeeCcccc--cccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFR--GPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~--~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+|.+.+..+..+..+.+|+.|++++|.++ +..|..+..+ +|+.|++++|++++. |..+. ++|++|++++|.+.+
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI-PKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC-CSSSC--SSCSCCBCCSSCCCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc-Ccccc--CCCCEEECCCCcCCc
Confidence 99999877778999999999999999996 4677888888 999999999999864 43332 799999999999998
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
..+..+..+++|+.|++++|.+.+..+..+..+++|++|+|++|.+. .+|..+..+++|+.|++++|.+++..+..|..
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc
Confidence 88899999999999999999999988888999999999999999998 67888999999999999999999777766654
Q ss_pred ------CCCCCeeeccCCcCC--ccchhhhhcccCCCeecCCCcc
Q 042735 241 ------LTKLEFLNLSTNRFS--SLIPESLGNLLKLHYLDLSKYQ 277 (667)
Q Consensus 241 ------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ls~n~ 277 (667)
..+|+.|++++|.+. +..|..+..+++|+.+++++|+
T Consensus 287 ~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 367999999999997 6678899999999999999875
No 253
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=6e-32 Score=285.83 Aligned_cols=233 Identities=20% Similarity=0.300 Sum_probs=165.2
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce---
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS--- 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~--- 496 (667)
++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.++++++|||||++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS--HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc--hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4678889999999999999986 46889999998754332 23456789999999999999999999999877655
Q ss_pred ---EEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ---ILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ---~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+. |+|.+.+... ....|.||||+|||++.++.+||+|||+++.....
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~- 197 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 197 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-------
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC-
Confidence 99999998 5777655321 11234599999999999999999999999865432
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh---------------hhc
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM---------------RLD 609 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---------------~~~ 609 (667)
.....||+.|+||| |+.++|||||||++|||+||+.||............... ...
T Consensus 198 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 198 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred --cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 33467999999999 467899999999999999999998643211000000000 000
Q ss_pred cccCCCCCCCCCch----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 610 EMLDPRLPPPSPDV----QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 610 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.........+.... ......+.+++.+||+.||++|||++|++++.||..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 329 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 329 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence 00000000000000 011235678889999999999999999999999864
No 254
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97 E-value=4.4e-32 Score=280.58 Aligned_cols=226 Identities=22% Similarity=0.318 Sum_probs=165.0
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH----ARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~----~~~ 495 (667)
++|...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|||||++++++.. ...
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 5788999999999999999986 66889999987542 22345679999999999999999999999973 347
Q ss_pred eEEEEEecCCCChHHHhccc----c-C-----------------------CcccccccCCeeecCCCceEEecccccccc
Q 042735 496 SILIYEYLKRGSLATNLSND----A-A-----------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~----~-~-----------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
.++||||+++|+|.+.+... . . ..|.||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 88999999999998877531 1 0 113499999999999999999999998764
Q ss_pred cCCCC---------CcccccccccccCCC---------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhc
Q 042735 548 KPDSS---------NWSALVGTYRYVAPD---------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLD 609 (667)
Q Consensus 548 ~~~~~---------~~~~~~Gt~~y~aPE---------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 609 (667)
..... ......||+.|+||| ++.++|||||||++|||+||+.||......... ... ...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~-~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS--VAL-AVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC--HHH-HHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch--hhH-Hhh
Confidence 32111 012346799999999 356899999999999999999997521110000 000 011
Q ss_pred cccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 610 EMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.. ...+.. +. ....+.+++.+||+.||++|||++|++++|....
T Consensus 262 ~~--~~~~~~-~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 262 NQ--LSIPQS-PR---HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp CC----CCCC-TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred cc--CCCCcc-cc---CCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11 111111 11 1124677888999999999999999999998754
No 255
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=8.5e-33 Score=289.89 Aligned_cols=235 Identities=19% Similarity=0.317 Sum_probs=172.8
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCch-------------HHhHHHHHHHHHHHHhcCCCCeeEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ-------------IADQKEFFAEIEALTKIRHRNIVKF 486 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~-------------~~~~~~~~~E~~~l~~l~H~niv~~ 486 (667)
.++|...+.||+|+||.||+|.. ++..||||++........ ....+.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36788999999999999999998 889999998753211000 0011679999999999999999999
Q ss_pred EEEEEeCCceEEEEEecCCCChHHH------hccc---------------------------cCCcccccccCCeeecCC
Q 042735 487 YGFCSHARHSILIYEYLKRGSLATN------LSND---------------------------AAAEELDISSKNVLLDLE 533 (667)
Q Consensus 487 ~g~~~~~~~~~lv~ey~~~g~L~~~------l~~~---------------------------~~~~~~dlk~~NiLld~~ 533 (667)
++++.+.+..++||||+++|+|.++ +... ....|.||||+||+++.+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 9999999999999999999999877 4331 112345999999999999
Q ss_pred CceEEecccccccccCCCCCcccccccccccCCCC-------CC-CchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh
Q 042735 534 HKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-------RK-KCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN 605 (667)
Q Consensus 534 ~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-------~~-~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 605 (667)
+.+||+|||+++..... ......||+.|+|||. +. ++|||||||++|||+||+.||...... .....
T Consensus 189 ~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~ 263 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VELFN 263 (348)
T ss_dssp SCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HHHHH
T ss_pred CcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHH
Confidence 99999999999875433 2345679999999993 22 799999999999999999998643210 11111
Q ss_pred hhhccccCCCCCCCC-------------CchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhhh
Q 042735 606 MRLDEMLDPRLPPPS-------------PDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVYF 662 (667)
Q Consensus 606 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~~ 662 (667)
..... ....+... .........+.+++.+||+.||++|||++|++++.||....+
T Consensus 264 ~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~ 331 (348)
T 2pml_X 264 NIRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331 (348)
T ss_dssp HHTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCH
T ss_pred HHhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCH
Confidence 00000 00111000 000111235678888999999999999999999999875443
No 256
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=1.9e-30 Score=283.00 Aligned_cols=289 Identities=27% Similarity=0.367 Sum_probs=210.1
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
++++|++|++++|.+++..+ +.++++|++|+|++|++.+.. . +.++++|++|++++|.+.+ ++. +.. .+|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L 161 (466)
T 1o6v_A 88 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID-P-LKNLTNLNRLELSSNTISD-ISA-LSGLTSLQQL 161 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-G-GTTCTTCSEEEEEEEEECC-CGG-GTTCTTCSEE
T ss_pred ccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh-H-HcCCCCCCEEECCCCccCC-Chh-hccCCcccEe
Confidence 47899999999999998655 889999999999999998653 3 8999999999999999875 443 333 457888
Q ss_pred EcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccC
Q 042735 80 ALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFF 159 (667)
Q Consensus 80 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 159 (667)
+++ |.+.+.. .+..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+++..+ ++.+++|+.|++++|.+.
T Consensus 162 ~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 162 SFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp EEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 775 3443322 266777788888888777654 346777788888888887776544 667777888888877775
Q ss_pred CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCccccc
Q 042735 160 GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIG 239 (667)
Q Consensus 160 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 239 (667)
+. +.+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++.+..+ ++
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hc
Confidence 43 356677778888888777776544 6777777788887777765433 6777777777777777765433 66
Q ss_pred CCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCccc
Q 042735 240 SLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECC 316 (667)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~ 316 (667)
.+++|+.|++++|.+++..| +..+++|+.|++++|++.+. ..+..+++|+.|++++|.+.+..| +..++.+
T Consensus 307 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 377 (466)
T 1o6v_A 307 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRI 377 (466)
T ss_dssp GCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTC
T ss_pred CCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCC
Confidence 77777777777777777654 66777777777777776553 356777777777777777766655 4444443
No 257
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=3.6e-32 Score=291.09 Aligned_cols=232 Identities=17% Similarity=0.235 Sum_probs=151.2
Q ss_pred CCcC-cceeecccCeEEEEEEeC---CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCc
Q 042735 422 DFDA-KYCIGSGRHGSVYRAELP---SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH--ARH 495 (667)
Q Consensus 422 ~f~~-~~~lg~g~~g~vy~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~--~~~ 495 (667)
.|+. .+.||+|+||.||+|+.. ++..||||++..... .+.+.+|++++++++|||||++++++.. ...
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 3554 457999999999999865 467899999865322 2357899999999999999999999965 678
Q ss_pred eEEEEEecCCCChHHHhccc---------------------------------cCCcccccccCCeee----cCCCceEE
Q 042735 496 SILIYEYLKRGSLATNLSND---------------------------------AAAEELDISSKNVLL----DLEHKAHV 538 (667)
Q Consensus 496 ~~lv~ey~~~g~L~~~l~~~---------------------------------~~~~~~dlk~~NiLl----d~~~~~kl 538 (667)
.++||||+++ +|.+.+... ....|.||||+|||+ +.++.+||
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999999985 665554311 112245999999999 77899999
Q ss_pred ecccccccccCCC---CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCC----C-hhh
Q 042735 539 SDFGIAKFLKPDS---SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILP----S-PSV 603 (667)
Q Consensus 539 ~DFGla~~~~~~~---~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~----~-~~~ 603 (667)
+|||+|+...... ......+||+.|+||| |+.++|||||||++|||+||+.||........ . ...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 9999998765321 2234568999999999 46689999999999999999999853221100 0 000
Q ss_pred hhhhhccccCCCCCCCCC-----------------------chHH--------HHHHHHHHHHhccccCCCCCCCHHHHH
Q 042735 604 INMRLDEMLDPRLPPPSP-----------------------DVQG--------KLISIMEVAFSCLDVSPESRPTMQTIT 652 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~-----------------------~~~~--------~~~~~~~~~~~Cl~~~p~~RPt~~ev~ 652 (667)
... +...+......... .... ....+.+++.+||+.||++|||++|++
T Consensus 254 l~~-i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 254 LDR-IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHH-HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHH-HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000 00000000000000 0000 012456888999999999999999999
Q ss_pred HHHHHhhhh
Q 042735 653 QQLLFSLVY 661 (667)
Q Consensus 653 ~~l~~~~~~ 661 (667)
++.||....
T Consensus 333 ~hp~f~~~~ 341 (405)
T 3rgf_A 333 QDPYFLEDP 341 (405)
T ss_dssp TSGGGTSSS
T ss_pred cChhhccCC
Confidence 999997643
No 258
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=8.6e-32 Score=290.38 Aligned_cols=220 Identities=21% Similarity=0.271 Sum_probs=158.4
Q ss_pred cCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEEEe
Q 042735 424 DAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 424 ~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ey 502 (667)
...+.||+|+||+||.+...+++.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++||||
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 345789999999998877778999999987531 234578999999987 799999999999999999999999
Q ss_pred cCCCChHHHhccccC-------------------------------CcccccccCCeeecCC-------------CceEE
Q 042735 503 LKRGSLATNLSNDAA-------------------------------AEELDISSKNVLLDLE-------------HKAHV 538 (667)
Q Consensus 503 ~~~g~L~~~l~~~~~-------------------------------~~~~dlk~~NiLld~~-------------~~~kl 538 (667)
+. |+|.+.+..... ..|.||||+|||++.+ +.+||
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 96 699888754311 1133999999999754 48999
Q ss_pred ecccccccccCCCCC----cccccccccccCCC-------------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCC
Q 042735 539 SDFGIAKFLKPDSSN----WSALVGTYRYVAPD-------------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPS 600 (667)
Q Consensus 539 ~DFGla~~~~~~~~~----~~~~~Gt~~y~aPE-------------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~ 600 (667)
+|||+++........ ....+||+.|+||| ++.++|||||||++|||+| |+.||.....
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---- 245 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS---- 245 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT----
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh----
Confidence 999999976543221 23467999999999 3557999999999999999 9999853211
Q ss_pred hhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 601 PSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
... ............. .........++.+++.+||+.||++|||+.||+++.||.
T Consensus 246 -~~~-~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 246 -RES-NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp -HHH-HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred -hHH-HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence 011 1111111111111 111122345677899999999999999999999998874
No 259
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=8.2e-32 Score=274.86 Aligned_cols=227 Identities=25% Similarity=0.414 Sum_probs=158.4
Q ss_pred cCCcCcceeecccCeEEEEEEeC--CCc--eEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--SKE--FLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--~~~--~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|++. ++. .||||++....... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 57888999999999999999853 233 58999886543222 234567999999999999999999999998765 8
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+.+.... ...|.||||+||+++.++.+||+|||+++......
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 89999999999988775421 11234999999999999999999999998765433
Q ss_pred CC---cccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 552 SN---WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 552 ~~---~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
.. .....||+.|+||| ++.++|||||||++|||+| |+.||..... .......... ....+.+ .
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~--~~~~~~~-~ 248 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----SQILHKIDKE--GERLPRP-E 248 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTS--CCCCCCC-T
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----HHHHHHHHcc--CCCCCCC-c
Confidence 21 22346788999999 4678999999999999999 9999853321 1111111011 1111111 1
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
. ....+.+++.+||+.+|++|||+.++++.|....
T Consensus 249 ~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 249 D---CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp T---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C---cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 1 1234677888999999999999999999987654
No 260
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=2.3e-31 Score=286.48 Aligned_cols=232 Identities=19% Similarity=0.264 Sum_probs=166.9
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc------CCCCeeEEEEEEEeC
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI------RHRNIVKFYGFCSHA 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~~~g~~~~~ 493 (667)
.+|+..+.||+|+||.||+|... +++.||||++... ....+.+.+|++++..+ .|+||+++++++...
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 46888999999999999999764 5788999998642 23345688899888877 577999999999999
Q ss_pred CceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecCCCc--eEEecccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDLEHK--AHVSDFGIAK 545 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~~~~--~kl~DFGla~ 545 (667)
...++||||+. |+|.+.+..... ..|.||||+|||++.++. +||+|||+++
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999999997 688877654321 123499999999999887 9999999997
Q ss_pred cccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC-----------CChhhhhh--
Q 042735 546 FLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL-----------PSPSVINM-- 606 (667)
Q Consensus 546 ~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~-----------~~~~~~~~-- 606 (667)
..... ....+||+.|+||| |+.++|||||||++|||+||+.||....... +.......
T Consensus 251 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~ 327 (429)
T 3kvw_A 251 YEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327 (429)
T ss_dssp ETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBT
T ss_pred ecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhh
Confidence 64432 33568999999999 7889999999999999999999986322100 00000000
Q ss_pred hhccccCC-----------------------------CCCCCCCchHHH-----HHHHHHHHHhccccCCCCCCCHHHHH
Q 042735 607 RLDEMLDP-----------------------------RLPPPSPDVQGK-----LISIMEVAFSCLDVSPESRPTMQTIT 652 (667)
Q Consensus 607 ~~~~~~~~-----------------------------~~~~~~~~~~~~-----~~~~~~~~~~Cl~~~p~~RPt~~ev~ 652 (667)
.....++. ..++........ ...+.+++.+||+.||++|||++|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L 407 (429)
T 3kvw_A 328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL 407 (429)
T ss_dssp THHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred hhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence 00000000 000111111110 23467899999999999999999999
Q ss_pred HHHHHhhhh
Q 042735 653 QQLLFSLVY 661 (667)
Q Consensus 653 ~~l~~~~~~ 661 (667)
++.|+....
T Consensus 408 ~Hpw~~~~~ 416 (429)
T 3kvw_A 408 RHPWLRRRL 416 (429)
T ss_dssp TSTTTC---
T ss_pred CChhhccCC
Confidence 999987543
No 261
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=8.5e-32 Score=285.99 Aligned_cols=232 Identities=23% Similarity=0.291 Sum_probs=162.7
Q ss_pred HHcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA---- 493 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~---- 493 (667)
..++|...+.||+|+||.||+|.. .+++.||||++..... ...+|++++++++|||||++++++...
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 456899999999999999999976 5688999998864321 133799999999999999999998543
Q ss_pred ----------------------------------CceEEEEEecCCCChHHHhcc----c--------------------
Q 042735 494 ----------------------------------RHSILIYEYLKRGSLATNLSN----D-------------------- 515 (667)
Q Consensus 494 ----------------------------------~~~~lv~ey~~~g~L~~~l~~----~-------------------- 515 (667)
...++||||++ |+|.+.+.. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999999 576655432 1
Q ss_pred ----cCCcccccccCCeeec-CCCceEEecccccccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHH
Q 042735 516 ----AAAEELDISSKNVLLD-LEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALE 583 (667)
Q Consensus 516 ----~~~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~E 583 (667)
....|.||||+|||++ .++.+||+|||+|+....... .....||+.|+||| |+.++||||+||++||
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 1122459999999998 689999999999987654332 34467899999998 5778999999999999
Q ss_pred HHhCCCCCCCCccCCCChhhhh---------h-hh-ccccCCCCCCCC-CchH-----HHHHHHHHHHHhccccCCCCCC
Q 042735 584 VIKGKHPRGFVSSILPSPSVIN---------M-RL-DEMLDPRLPPPS-PDVQ-----GKLISIMEVAFSCLDVSPESRP 646 (667)
Q Consensus 584 lltG~~p~~~~~~~~~~~~~~~---------~-~~-~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~Cl~~~p~~RP 646 (667)
|++|+.||...........+.. . .. ........+... .... .....+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999864321100000000 0 00 000000011000 0000 0122467888999999999999
Q ss_pred CHHHHHHHHHHhhh
Q 042735 647 TMQTITQQLLFSLV 660 (667)
Q Consensus 647 t~~ev~~~l~~~~~ 660 (667)
|+.|++++.||...
T Consensus 315 t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 315 NPYEAMAHPFFDHL 328 (383)
T ss_dssp CHHHHHTSGGGHHH
T ss_pred CHHHHhcCHHHHHH
Confidence 99999999998754
No 262
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=3e-31 Score=299.62 Aligned_cols=224 Identities=24% Similarity=0.394 Sum_probs=165.0
Q ss_pred cCCcCcceeecccCeEEEEEEeCC----CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCce
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS----KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHS 496 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~ 496 (667)
++|+..+.||+|+||.||+|.+.. +..+|||++.... .....+.|.+|+.++++++|||||+++|++. .+..
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 567788899999999999998743 3468999876432 2234567999999999999999999999985 4568
Q ss_pred EEEEEecCCCChHHHhcccc-------------------------CCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 497 ILIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 497 ~lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
++||||+++|+|.+++.... ...|.||||+|||++.++.+||+|||+++......
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 99999999999998876332 11234999999999999999999999998764432
Q ss_pred C-CcccccccccccCCC------CCCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 552 S-NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 552 ~-~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
. ......||+.|+||| |+.++|||||||++|||++ |+.||..... ..... .+.....+..+...+
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----~~~~~-~i~~~~~~~~~~~~~-- 618 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIG-RIENGERLPMPPNCP-- 618 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHH-HHHHTCCCCCCTTCC--
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH----HHHHH-HHHcCCCCCCCcccc--
Confidence 2 123346788999999 6789999999999999997 9999763221 11111 111111112222221
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..+.+++.+||+.||++|||+.|+++.|....
T Consensus 619 ----~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 619 ----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 24667888999999999999999999987654
No 263
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=2.3e-31 Score=274.67 Aligned_cols=227 Identities=22% Similarity=0.335 Sum_probs=165.1
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC--CCCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR--HRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|...+++.+|||++..... .....+.+.+|++++.+++ ||||+++++++.+.+..++
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 56888899999999999999988899999999865332 2334567999999999998 5999999999999999999
Q ss_pred EEEecCCCChHHHhccccC------------------------CcccccccCCeeecCCCceEEecccccccccCCCC--
Q 042735 499 IYEYLKRGSLATNLSNDAA------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS-- 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~-- 552 (667)
||| +.+|+|.+++..... ..|.||||+||++++ +.+||+|||+++.......
T Consensus 106 v~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred EEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 999 677899887754321 123499999999974 8999999999987654322
Q ss_pred CcccccccccccCCCC-----------------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC
Q 042735 553 NWSALVGTYRYVAPDY-----------------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR 615 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-----------------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (667)
......||+.|+|||. +.++|||||||++|||+||+.||..... .... .....++.
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~----~~~~~~~~ 256 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISK----LHAIIDPN 256 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHH----HHHHHCTT
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---HHHH----HHHHHhcc
Confidence 1234579999999993 2368999999999999999999853221 0011 11122221
Q ss_pred CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 616 LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.....+.. ....+.+++.+||+.||++|||++|++++.|+...
T Consensus 257 ~~~~~~~~--~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 299 (313)
T 3cek_A 257 HEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299 (313)
T ss_dssp SCCCCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred cccCCccc--chHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence 11111110 01246678889999999999999999999998754
No 264
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=281.34 Aligned_cols=214 Identities=16% Similarity=0.193 Sum_probs=160.6
Q ss_pred cCCcCcceeecccCeEEEEEE------eCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC---CCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAE------LPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR---HRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~------~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|. ...++.||||++... ...++.+|++++.+++ |+||+++++++.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 568888999999999999993 456788999998642 2346788888888887 999999999999
Q ss_pred eCCceEEEEEecCCCChHHHhcc------cc-----------------------CCcccccccCCeeecC----------
Q 042735 492 HARHSILIYEYLKRGSLATNLSN------DA-----------------------AAEELDISSKNVLLDL---------- 532 (667)
Q Consensus 492 ~~~~~~lv~ey~~~g~L~~~l~~------~~-----------------------~~~~~dlk~~NiLld~---------- 532 (667)
..+..++||||+++|+|.+++.. .. ...|.||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999998852 11 1123499999999998
Q ss_pred -CCceEEecccccccccCC--CCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh
Q 042735 533 -EHKAHVSDFGIAKFLKPD--SSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV 603 (667)
Q Consensus 533 -~~~~kl~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~ 603 (667)
++.+||+|||+|+..... ....+..+||+.||||| |+.++|||||||++|||+||+.||.....
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------- 290 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG------- 290 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET-------
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC-------
Confidence 899999999999765422 22345578999999999 67899999999999999999999742111
Q ss_pred hhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCC-CCHHHHHHHHHH
Q 042735 604 INMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESR-PTMQTITQQLLF 657 (667)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~R-Pt~~ev~~~l~~ 657 (667)
.. .......... +. ...+.+++..|++.+|.+| |+++++.+.+..
T Consensus 291 ~~----~~~~~~~~~~-~~----~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 291 GE----CKPEGLFRRL-PH----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp TE----EEECSCCTTC-SS----HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred Cc----eeechhcccc-Cc----HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 00 0011111111 11 1134567779999999988 567777665554
No 265
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=287.77 Aligned_cols=223 Identities=21% Similarity=0.307 Sum_probs=159.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv 499 (667)
.+|...+.||+|+||.||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....++|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 45788889999999997766667788999999864321 1256899999999 799999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecC-----CCceEEecccccccccC
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDL-----EHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~-----~~~~kl~DFGla~~~~~ 549 (667)
|||++ |+|.+.+..... ..|.||||+|||++. ...+||+|||+|+....
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 99997 589887754321 123499999999943 34688999999987654
Q ss_pred CC---CCcccccccccccCCCC---------CCCchHHHHHHHHHHHHh-CCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 550 DS---SNWSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIK-GKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 550 ~~---~~~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
.. ...+..+||+.|+|||. +.++|||||||++|||+| |+.||+.... ....... .......
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~~~~~~-~~~~~~~ 249 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQANILL-GACSLDC 249 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HHHHHHT-TCCCCTT
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HHHHHHh-ccCCccc
Confidence 32 12345679999999993 347899999999999999 8888742211 1111110 1111111
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
..+. ......+.+++.+||+.||++|||++||+++.||...
T Consensus 250 ~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 250 LHPE---KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp SCTT---CHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred cCcc---ccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 1111 1122346688899999999999999999999888643
No 266
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=1.4e-31 Score=285.89 Aligned_cols=229 Identities=19% Similarity=0.263 Sum_probs=165.6
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC--------CCCeeEEEEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR--------HRNIVKFYGFCS 491 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~~~g~~~ 491 (667)
++|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ |||||++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 5788999999999999999976 55788999998642 234567899999999996 788999999997
Q ss_pred ----eCCceEEEEEecCCCChHHHhccc--------------------------c-CCcccccccCCeeecCCC------
Q 042735 492 ----HARHSILIYEYLKRGSLATNLSND--------------------------A-AAEELDISSKNVLLDLEH------ 534 (667)
Q Consensus 492 ----~~~~~~lv~ey~~~g~L~~~l~~~--------------------------~-~~~~~dlk~~NiLld~~~------ 534 (667)
.....++||||+. |++.+.+... . ...|.||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhh
Confidence 5567899999994 5554443211 1 234569999999999775
Q ss_pred -------------------------------------------ceEEecccccccccCCCCCcccccccccccCCC----
Q 042735 535 -------------------------------------------KAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD---- 567 (667)
Q Consensus 535 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE---- 567 (667)
.+||+|||+++..... .+..+||+.|+|||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHT
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcC
Confidence 7999999999876432 33467999999999
Q ss_pred --CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh-hhhcc------------------ccCC--------CCCC
Q 042735 568 --YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN-MRLDE------------------MLDP--------RLPP 618 (667)
Q Consensus 568 --~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~-~~~~~------------------~~~~--------~~~~ 618 (667)
|+.++|||||||++|||+||+.||.............. ..... .... ...+
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 68899999999999999999999864322111000000 00000 0000 0000
Q ss_pred C---------CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 619 P---------SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 619 ~---------~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. ..........+.+++.+||+.||++|||++|++++.||.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 001123345678899999999999999999999998874
No 267
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=277.31 Aligned_cols=221 Identities=20% Similarity=0.233 Sum_probs=150.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEe------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSH------ 492 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~------ 492 (667)
.+|...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++.++. |||||++++++..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 4788889999999999999986 46889999987432 2334567899999999996 9999999999943
Q ss_pred --CCceEEEEEecCCCChHHHhcc---------------------------ccC--CcccccccCCeeecCCCceEEecc
Q 042735 493 --ARHSILIYEYLKRGSLATNLSN---------------------------DAA--AEELDISSKNVLLDLEHKAHVSDF 541 (667)
Q Consensus 493 --~~~~~lv~ey~~~g~L~~~l~~---------------------------~~~--~~~~dlk~~NiLld~~~~~kl~DF 541 (667)
....++||||+. |+|.+.+.. ... ..|.||||+|||++.++.+||+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 345789999997 688765532 012 446699999999999999999999
Q ss_pred cccccccCCCCC------------cccccccccccCCCC---------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 042735 542 GIAKFLKPDSSN------------WSALVGTYRYVAPDY---------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPS 600 (667)
Q Consensus 542 Gla~~~~~~~~~------------~~~~~Gt~~y~aPE~---------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~ 600 (667)
|+++........ .....||+.|+|||. +.++|||||||++|||+||+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 999876543211 114569999999993 347899999999999999999985322110
Q ss_pred hhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 601 PSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. .........+...+. .+.+++.+||+.+|++|||++|++++|.....
T Consensus 261 --~----~~~~~~~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 261 --I----VNGKYSIPPHDTQYT------VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -----------CCCCTTCCSSG------GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --h----hcCcccCCcccccch------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 001111111111111 25578889999999999999999999987654
No 268
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=3.2e-31 Score=271.15 Aligned_cols=225 Identities=16% Similarity=0.193 Sum_probs=165.4
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEE-EeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFC-SHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~-~~~~~~~l 498 (667)
++|+..+.||+|+||.||+|+. .+++.||||++..... .+.+.+|++++++++|++++..++++ .+.+..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 5788999999999999999986 6788999998764322 13588999999999998877666655 56677899
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeee---cCCCceEEecccccccccCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~~ 550 (667)
||||+ +|+|.+.+.... ...|.||||+||++ +.++.+||+|||+++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999 999998875211 11234999999999 58899999999999876543
Q ss_pred CC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCC--
Q 042735 551 SS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPR-- 615 (667)
Q Consensus 551 ~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 615 (667)
.. ......||+.|+||| ++.++|||||||++|||+||+.||............... ........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~ 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI-SEKKMSTPIE 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH-HHHHHHSCHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhh-cccccCCchH
Confidence 22 124567999999998 567899999999999999999998743322111111100 00000000
Q ss_pred -CCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 616 -LPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 616 -~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
..... ...+.+++.+||+.+|++|||++||++.+....
T Consensus 241 ~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 241 VLCKGY------PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHTTTS------CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred HHHhhC------CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 00111 124677888999999999999999999887654
No 269
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=2.9e-31 Score=271.41 Aligned_cols=230 Identities=16% Similarity=0.190 Sum_probs=163.8
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEE-EeCCceE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFC-SHARHSI 497 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~-~~~~~~~ 497 (667)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|++++.+++|++++..++++ .+.+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 46899999999999999999986 6688899998654321 12478899999999988877776665 5677889
Q ss_pred EEEEecCCCChHHHhcccc-------------------------CCcccccccCCeee---cCCCceEEecccccccccC
Q 042735 498 LIYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 498 lv~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~ 549 (667)
+||||+ +|+|.+.+.... ...|.||||+|||+ +.++.+||+|||+++....
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999999 999998875211 11234999999999 7899999999999987654
Q ss_pred CCC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCC
Q 042735 550 DSS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRL 616 (667)
Q Consensus 550 ~~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (667)
... ......||+.|+||| ++.++|||||||++|||+||+.||................ ........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~ 239 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS-EKKMSTPI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH-HHHHHSCH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh-cccccchh
Confidence 322 123567999999998 5678999999999999999999987433222111111100 00000000
Q ss_pred CCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 617 PPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
+.... .....+.+++.+||+.+|++|||++||++.+.....
T Consensus 240 ~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 240 EVLCK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHTT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhhc---cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00000 011256788889999999999999999998776543
No 270
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=279.25 Aligned_cols=231 Identities=19% Similarity=0.285 Sum_probs=165.1
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc----
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH---- 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~---- 495 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++|||||++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 4688889999999999999986 4688999999875432 22345678999999999999999999999987654
Q ss_pred --eEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 --SILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 --~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.++||||++ |+|.+.+... ....|.||||+||+++.++.+||+|||+++.....
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 179 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 179 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-
Confidence 499999998 5776654321 11234599999999999999999999999865432
Q ss_pred CCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh-------------------
Q 042735 552 SNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN------------------- 605 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~------------------- 605 (667)
.+...||+.|+||| ++.++|||||||++|||+||+.||..............
T Consensus 180 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 180 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred --ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 23467899999999 46789999999999999999999864321100000000
Q ss_pred hhhccc---cCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 606 MRLDEM---LDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 606 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...... ....+....+ .....+.+++.+||+.||++|||++|++++.||...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFP---RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCT---TSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHhCcCCCCccHHHhcC---CcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 000000 0001111011 112356788889999999999999999999998643
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=3.1e-31 Score=276.44 Aligned_cols=227 Identities=19% Similarity=0.234 Sum_probs=144.1
Q ss_pred HcCCcCc-ceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHH-HHHHhcCCCCeeEEEEEEEe----
Q 042735 420 INDFDAK-YCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEI-EALTKIRHRNIVKFYGFCSH---- 492 (667)
Q Consensus 420 ~~~f~~~-~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~~~g~~~~---- 492 (667)
.++|... +.||+|+||.||+|... +++.||||++... .. ..+|+ ..+..++||||+++++++..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PK----ARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HH----HHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 3577774 46999999999999875 6889999997541 11 22233 34567789999999999976
Q ss_pred CCceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecC---CCceEEecccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDL---EHKAHVSDFGI 543 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~---~~~~kl~DFGl 543 (667)
....++||||+++|+|.+++..... ..|.||||+||+++. ++.+||+|||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 4458999999999999998865321 113499999999986 45599999999
Q ss_pred cccccCCCCCcccccccccccCCCC------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPDY------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE~------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
++..... ......||+.|+|||. +.++|||||||++|||+||+.||................... ....+
T Consensus 178 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~ 253 (336)
T 3fhr_A 178 AKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG--QYGFP 253 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCC
T ss_pred ceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc--ccccC
Confidence 9865432 2345678999999994 457999999999999999999985332211100000000000 01111
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
.+ ........+.+++.+||+.||++|||++|++++.|+....
T Consensus 254 ~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 254 NP--EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp TT--TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred ch--hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 11 1111223466788899999999999999999999997644
No 272
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.6e-32 Score=285.58 Aligned_cols=228 Identities=16% Similarity=0.218 Sum_probs=165.5
Q ss_pred cCCcCcceeecccCeEEEEEEeCC---------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeE------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPS---------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVK------ 485 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~---------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~------ 485 (667)
++|...+.||+|+||.||+|+... +..||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 578889999999999999998754 788999997642 24789999999999999998
Q ss_pred ---------EEEEEEe-CCceEEEEEecCCCChHHHhccc--c------------------------CCcccccccCCee
Q 042735 486 ---------FYGFCSH-ARHSILIYEYLKRGSLATNLSND--A------------------------AAEELDISSKNVL 529 (667)
Q Consensus 486 ---------~~g~~~~-~~~~~lv~ey~~~g~L~~~l~~~--~------------------------~~~~~dlk~~NiL 529 (667)
+++++.. ....++||||+ +|+|.+++... . ...|.||||+||+
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6788876 67889999999 99999988643 1 1123499999999
Q ss_pred ecCCC--ceEEecccccccccCCCC-------CcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCC
Q 042735 530 LDLEH--KAHVSDFGIAKFLKPDSS-------NWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFV 594 (667)
Q Consensus 530 ld~~~--~~kl~DFGla~~~~~~~~-------~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~ 594 (667)
++.++ .+||+|||+++....... ......||+.|+||| |+.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 999999999986543221 123458999999998 567899999999999999999998633
Q ss_pred ccCCCChhhhhhhhcccc--CCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 595 SSILPSPSVINMRLDEML--DPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
... ........ .... .+.+.............+.+++.+||+.||++|||++||++.|......
T Consensus 272 ~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPN--TEDIMKQK-QKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTC--HHHHHHHH-HHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcC--HHHHHHHH-HhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 210 00111100 0000 0111111100001123567788899999999999999999998876543
No 273
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=4e-31 Score=283.94 Aligned_cols=230 Identities=22% Similarity=0.275 Sum_probs=160.0
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHA------ 493 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~------ 493 (667)
.+|+..+.||+|+||.||+|+.. +++.||||++..... .+.+|++++++++|||||++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 35788899999999999999875 588999998854321 234799999999999999999998642
Q ss_pred CceEEEEEecCCCChHHHhcc----------------------------ccCCcccccccCCeeecCC-CceEEeccccc
Q 042735 494 RHSILIYEYLKRGSLATNLSN----------------------------DAAAEELDISSKNVLLDLE-HKAHVSDFGIA 544 (667)
Q Consensus 494 ~~~~lv~ey~~~g~L~~~l~~----------------------------~~~~~~~dlk~~NiLld~~-~~~kl~DFGla 544 (667)
...++||||+++ ++.+.+.. .....|.||||+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 236799999996 44333221 0112345999999999965 67899999999
Q ss_pred ccccCCCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhh-------hhhc-
Q 042735 545 KFLKPDSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVIN-------MRLD- 609 (667)
Q Consensus 545 ~~~~~~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~-------~~~~- 609 (667)
+....... ....+||+.|+||| |+.++|||||||++|||++|+.||...........+.. ..+.
T Consensus 205 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 205 KQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp EECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 97654332 23467999999999 56789999999999999999999864321100000000 0000
Q ss_pred ---cccCCCCCCCCC-chH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 610 ---EMLDPRLPPPSP-DVQ-----GKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 610 ---~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...+..++.... ... .....+.+++.+||+.||++|||+.|+++|.||...
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 000011111000 000 112356788899999999999999999999999654
No 274
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=9.3e-30 Score=275.77 Aligned_cols=276 Identities=23% Similarity=0.190 Sum_probs=220.3
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
+++|+.|+|++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++. .+|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 57899999999999975 5 688999999999999999874 4 88999999999999999864 3 555 5699999
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+++. + +..+++|+.|++++|++++. + +.++++|+.|++++|...+.+ .++.+++|++|++++|.+.+
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 999999874 3 78889999999999999874 3 788999999999999655554 47888899999999998876
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
+| +..+++|+.|++++|.+++. .++.+++|+.|++++|++.+ +| ++.+++|+.|++++|++.+..+..+.+
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSK 255 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCC
Confidence 34 77888999999999988864 37888899999999998887 45 788889999999999888765555544
Q ss_pred CC-------CCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchh--------hhcCCCCCEEECcCCCCCC
Q 042735 241 LT-------KLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKE--------LGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 241 l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~--------l~~l~~L~~L~l~~n~l~~ 304 (667)
+. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|.. +..+++|++|++++|.+++
T Consensus 256 L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 256 LTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp CCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 44 45666666666666555 456788888888888777766642 4455677888888888766
No 275
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=2.8e-31 Score=275.59 Aligned_cols=238 Identities=19% Similarity=0.321 Sum_probs=165.9
Q ss_pred HHcCCcCcceeecccCeEEEEEEe--CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc---CCCCeeEEEEEEE--
Q 042735 419 AINDFDAKYCIGSGRHGSVYRAEL--PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI---RHRNIVKFYGFCS-- 491 (667)
Q Consensus 419 ~~~~f~~~~~lg~g~~g~vy~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~g~~~-- 491 (667)
+.++|+..+.||+|+||.||+|+. .++..||||++....... .....+.+|+++++++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 346899999999999999999987 457889999875322111 1112466777777666 8999999999997
Q ss_pred ---eCCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeeecCCCceEEeccc
Q 042735 492 ---HARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLLDLEHKAHVSDFG 542 (667)
Q Consensus 492 ---~~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLld~~~~~kl~DFG 542 (667)
.....++||||++ |+|.+.+.... ...|.||||+||+++.++.+||+|||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCc
Confidence 4567899999998 69988775321 11234999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhh--------h-
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINM--------R- 607 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~--------~- 607 (667)
+++...... ......||+.|+||| |+.++|||||||++|||+||+.||...........+... .
T Consensus 166 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 166 LARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp SCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred ccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 998654322 234467999999999 578899999999999999999998633211000000000 0
Q ss_pred -----hccccCCCCCCCCC-chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 608 -----LDEMLDPRLPPPSP-DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 608 -----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
...........+.. ........+.+++.+||+.||++|||+.|++++.|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence 00000000000000 000112245678889999999999999999999998654
No 276
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=270.63 Aligned_cols=229 Identities=20% Similarity=0.285 Sum_probs=151.4
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~l 498 (667)
.++|+..+.||+|+||.||+|... +++.||||++..... .....+.+.++..+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 468888999999999999999875 688999999865432 22223344455567888899999999999999999999
Q ss_pred EEEecCCCChHHHhc--------------------------cccCCcccccccCCeeecCCCceEEecccccccccCCCC
Q 042735 499 IYEYLKRGSLATNLS--------------------------NDAAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSS 552 (667)
Q Consensus 499 v~ey~~~g~L~~~l~--------------------------~~~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~ 552 (667)
||||+ ++.+..... ......|.||||+||+++.++.+||+|||+++......
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 99999 344433221 11123456999999999999999999999998654332
Q ss_pred CcccccccccccCCCC-----------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCC
Q 042735 553 NWSALVGTYRYVAPDY-----------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSP 621 (667)
Q Consensus 553 ~~~~~~Gt~~y~aPE~-----------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (667)
......||+.|+|||. +.++|||||||++|||+||+.||..... ......... ....+..+...
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~-~~~~~~~~~~~- 254 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT---DFEVLTKVL-QEEPPLLPGHM- 254 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHHHHHH-HSCCCCCCSSS-
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc---cHHHHHHHh-ccCCCCCCccC-
Confidence 2234579999999993 4579999999999999999999863211 011111111 11111122111
Q ss_pred chHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 622 DVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 622 ~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
. ....+.+++.+||+.||++|||++|++++.|+...
T Consensus 255 ~---~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 255 G---FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp C---CCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred C---CCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 1 11246678889999999999999999999988643
No 277
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=7.9e-31 Score=273.51 Aligned_cols=226 Identities=20% Similarity=0.294 Sum_probs=168.7
Q ss_pred cCCcCcceeecccCeEEEEEEe--CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC------eeEEEEEEEe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL--PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN------IVKFYGFCSH 492 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~~~g~~~~ 492 (667)
++|+..+.||+|+||.||+|.. .++..||||++... ....+.+.+|++++.+++|++ ++++++++.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 5788899999999999999976 35788999998642 234567889999999987765 9999999999
Q ss_pred CCceEEEEEecCCCChHHHhccccC--------------------------CcccccccCCeeecC--------------
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA--------------------------AEELDISSKNVLLDL-------------- 532 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~--------------------------~~~~dlk~~NiLld~-------------- 532 (667)
.+..++||||+ +|+|.+.+..... ..|.||||+|||++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999999 8899887754321 113499999999987
Q ss_pred -----CCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCCh
Q 042735 533 -----EHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSP 601 (667)
Q Consensus 533 -----~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~ 601 (667)
++.+||+|||+++..... .....||+.|+||| |+.++|||||||++|||+||+.||.......
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE--- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---
T ss_pred cccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---
Confidence 678999999999875432 23468999999999 6789999999999999999999986322100
Q ss_pred hhhhhhhccccCC--------------------CCCC-----------------CCCchHHHHHHHHHHHHhccccCCCC
Q 042735 602 SVINMRLDEMLDP--------------------RLPP-----------------PSPDVQGKLISIMEVAFSCLDVSPES 644 (667)
Q Consensus 602 ~~~~~~~~~~~~~--------------------~~~~-----------------~~~~~~~~~~~~~~~~~~Cl~~~p~~ 644 (667)
.. ........+ .+.. ...........+.+++.+||+.||++
T Consensus 242 -~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 242 -HL-AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp -HH-HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred -HH-HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 00 000000000 0000 00000122346778999999999999
Q ss_pred CCCHHHHHHHHHHhhh
Q 042735 645 RPTMQTITQQLLFSLV 660 (667)
Q Consensus 645 RPt~~ev~~~l~~~~~ 660 (667)
|||++|++++.||...
T Consensus 320 Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 320 RITLREALKHPFFDLL 335 (339)
T ss_dssp SCCHHHHTTSGGGGGG
T ss_pred ccCHHHHhcCHHHHHH
Confidence 9999999999998654
No 278
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=9.7e-32 Score=278.20 Aligned_cols=224 Identities=23% Similarity=0.348 Sum_probs=162.7
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.++|+..+.||+|+||.||+|.... .+|+|++....... ...+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE--DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC--CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH--HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 3578889999999999999998754 48999886542211 1224577899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccccC-------------------------CcccccccCCeeecCCCceEEecccccccccCC----
Q 042735 500 YEYLKRGSLATNLSNDAA-------------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPD---- 550 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~~-------------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~---- 550 (667)
|||+++|+|.+.+..... ..|.||||+||+++ ++.+||+|||+++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999999999998865321 12349999999998 689999999998764321
Q ss_pred -CCCcccccccccccCCC---------------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCC
Q 042735 551 -SSNWSALVGTYRYVAPD---------------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDP 614 (667)
Q Consensus 551 -~~~~~~~~Gt~~y~aPE---------------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 614 (667)
........||+.|+||| |+.++|||||||++|||+||+.||..... ..... .......+
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~-~~~~~~~~ 261 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA----EAIIW-QMGTGMKP 261 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH----HHHHH-HHHTTCCC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHH-HhccCCCC
Confidence 11223456999999998 24478999999999999999999863221 11111 11111122
Q ss_pred CCCC-CCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 615 RLPP-PSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 615 ~~~~-~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
.... ..+ ..+.+++.+||+.+|++|||++|+++.+....
T Consensus 262 ~~~~~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 262 NLSQIGMG------KEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp CCCCSSCC------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred CCCcCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 2111 111 13567888999999999999999999987654
No 279
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=1.1e-30 Score=277.35 Aligned_cols=165 Identities=22% Similarity=0.310 Sum_probs=135.3
Q ss_pred HcCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCC-----eeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRN-----IVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~n-----iv~~~g~~~~ 492 (667)
.++|+..+.||+|+||.||+|... +++.||||++... ....+++.+|++++..++ |++ ||++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 468999999999999999999864 5788999998642 233456788999988886 554 9999999999
Q ss_pred CCceEEEEEecCCCChHHHhcccc----------------------------CCcccccccCCeeec--CCCceEEeccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA----------------------------AAEELDISSKNVLLD--LEHKAHVSDFG 542 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~----------------------------~~~~~dlk~~NiLld--~~~~~kl~DFG 542 (667)
.+..++||||++ |+|.+.+.... ...|.||||+|||++ .++.+||+|||
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999999997 58877664321 123459999999994 57889999999
Q ss_pred ccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCC
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGF 593 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~ 593 (667)
+++..... .....||+.|+||| |+.++|||||||++|||+||+.||..
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99876432 23568999999999 67899999999999999999999863
No 280
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=2.5e-29 Score=272.44 Aligned_cols=276 Identities=22% Similarity=0.222 Sum_probs=237.4
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
++++|+.|+|++|.++++ | +.++++|++|+|++|++++. | ++++++|++|++++|++++ +| ++. .+|+.|
T Consensus 62 ~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L 132 (457)
T 3bz5_A 62 KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYL 132 (457)
T ss_dssp GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEE
T ss_pred ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEE
Confidence 368999999999999985 4 88999999999999999974 4 8999999999999999986 44 554 569999
Q ss_pred EcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccC
Q 042735 80 ALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFF 159 (667)
Q Consensus 80 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 159 (667)
++++|.+++. .+..+.+|+.|++++|...+.+ .+..+++|+.|++++|++++. + ++.+++|+.|++++|.+.
T Consensus 133 ~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 133 NCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp ECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCC
Confidence 9999999874 3788999999999999766665 488999999999999999874 4 889999999999999998
Q ss_pred CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCc-------ccceeecccccccc
Q 042735 160 GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLN-------SLTKLILRGNQLIG 232 (667)
Q Consensus 160 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-------~L~~L~L~~n~l~~ 232 (667)
+. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|.+.+..+..+.++. +|+.|++++|.+.+
T Consensus 205 ~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~ 278 (457)
T 3bz5_A 205 KL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLI 278 (457)
T ss_dssp CC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred ee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCC
Confidence 75 48899999999999999998 55 88999999999999999987666666555 56777888887777
Q ss_pred cCcccccCCCCCCeeeccCCcCCccchhh--------hhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 233 HLPSEIGSLTKLEFLNLSTNRFSSLIPES--------LGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 233 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--------~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
.+| ++.+++|+.|++++|...+.+|.. +.++++|+.|++++|++.+ ++ ++.+++|+.|++++|.+.+
T Consensus 279 ~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 279 YFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB
T ss_pred ccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC
Confidence 666 578899999999999887766643 4556789999999999887 44 8899999999999999975
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=3.1e-31 Score=294.25 Aligned_cols=236 Identities=23% Similarity=0.250 Sum_probs=167.0
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe------
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH------ 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~------ 492 (667)
.++|...+.||+|+||.||+|.. .++..||||++.... .....+.|.+|++++++++|||||++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 46899999999999999999986 458889999886532 23345679999999999999999999999765
Q ss_pred CCceEEEEEecCCCChHHHhccccC---------------------------CcccccccCCeeecCCCc---eEEeccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDAA---------------------------AEELDISSKNVLLDLEHK---AHVSDFG 542 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~~---------------------------~~~~dlk~~NiLld~~~~---~kl~DFG 542 (667)
.+..++||||+++|+|.+++..... ..|.||||+||+++.++. +||+|||
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 6778999999999999998865321 113499999999997765 9999999
Q ss_pred ccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCc----cCCCC--hhhhhhhhcc
Q 042735 543 IAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVS----SILPS--PSVINMRLDE 610 (667)
Q Consensus 543 la~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~----~~~~~--~~~~~~~~~~ 610 (667)
+++...... ......||+.|+||| |+.++|||||||++|||+||+.||.... +.... ..........
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765433 234568999999999 5679999999999999999999985210 00000 0000000000
Q ss_pred ------ccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 611 ------MLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 611 ------~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
......+.+..........+.+++.+||+.||++|||++|++++.||..
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 0111112221112223446778899999999999999999887777653
No 282
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=273.21 Aligned_cols=221 Identities=19% Similarity=0.334 Sum_probs=161.7
Q ss_pred HcCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCch--HHhHHHHHHHHHHHHhc----CCCCeeEEEEEEEe
Q 042735 420 INDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQ--IADQKEFFAEIEALTKI----RHRNIVKFYGFCSH 492 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~--~~~~~~~~~E~~~l~~l----~H~niv~~~g~~~~ 492 (667)
.++|...+.||+|+||.||+|+. .+++.||||++........ ......+.+|++++.++ +||||+++++++.+
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 46799999999999999999986 5678899999865322111 11223466899999998 89999999999999
Q ss_pred CCceEEEEEe-cCCCChHHHhccccC------------------------CcccccccCCeeec-CCCceEEeccccccc
Q 042735 493 ARHSILIYEY-LKRGSLATNLSNDAA------------------------AEELDISSKNVLLD-LEHKAHVSDFGIAKF 546 (667)
Q Consensus 493 ~~~~~lv~ey-~~~g~L~~~l~~~~~------------------------~~~~dlk~~NiLld-~~~~~kl~DFGla~~ 546 (667)
.+..++|||| +.+|+|.+++..... ..|.||||+||+++ .++.+||+|||+++.
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL 189 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence 9999999999 899999988754321 12349999999999 899999999999987
Q ss_pred ccCCCCCcccccccccccCCCC-------CCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCC
Q 042735 547 LKPDSSNWSALVGTYRYVAPDY-------RKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPP 619 (667)
Q Consensus 547 ~~~~~~~~~~~~Gt~~y~aPE~-------~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (667)
.... ......||+.|+|||. +.++|||||||++|||+||+.||..... ... . ....+..
T Consensus 190 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~----~--~~~~~~~ 255 (312)
T 2iwi_A 190 LHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILE----A--ELHFPAH 255 (312)
T ss_dssp CCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH----T--CCCCCTT
T ss_pred cccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhh----h--ccCCccc
Confidence 6543 2345679999999992 3479999999999999999999853211 110 0 1112211
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhh
Q 042735 620 SPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 620 ~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
.+ ..+.+++.+||+.+|++|||++|++++.|+...
T Consensus 256 ~~------~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 256 VS------PDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp SC------HHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred CC------HHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence 11 246678889999999999999999999887643
No 283
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=1.5e-31 Score=276.89 Aligned_cols=221 Identities=21% Similarity=0.338 Sum_probs=167.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCc--hHHhHHHHHHHHHHHHhcC--CCCeeEEEEEEEeCCc
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSD--QIADQKEFFAEIEALTKIR--HRNIVKFYGFCSHARH 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~~~g~~~~~~~ 495 (667)
++|...+.||+|+||.||+|.. .+++.||||++....... .....+.+.+|+.++++++ ||||+++++++.+.+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 5788899999999999999975 567889999886432211 0011234678999999996 5999999999999999
Q ss_pred eEEEEEecCC-CChHHHhccccC------------------------CcccccccCCeeec-CCCceEEecccccccccC
Q 042735 496 SILIYEYLKR-GSLATNLSNDAA------------------------AEELDISSKNVLLD-LEHKAHVSDFGIAKFLKP 549 (667)
Q Consensus 496 ~~lv~ey~~~-g~L~~~l~~~~~------------------------~~~~dlk~~NiLld-~~~~~kl~DFGla~~~~~ 549 (667)
.++||||+.+ ++|.+++..... ..|.||||+||+++ .++.+||+|||+++....
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc
Confidence 9999999986 899887754211 12349999999999 789999999999987653
Q ss_pred CCCCcccccccccccCCC-------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCc
Q 042735 550 DSSNWSALVGTYRYVAPD-------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPD 622 (667)
Q Consensus 550 ~~~~~~~~~Gt~~y~aPE-------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (667)
. ......||+.|+||| ++.++|||||||++|||+||+.||..... .. ... ...+...+
T Consensus 203 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~----~~~--~~~~~~~~- 267 (320)
T 3a99_A 203 T--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------II----RGQ--VFFRQRVS- 267 (320)
T ss_dssp S--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH----HCC--CCCSSCCC-
T ss_pred c--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hh----ccc--ccccccCC-
Confidence 2 234567999999999 24578999999999999999999853211 00 010 01111111
Q ss_pred hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 623 VQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 623 ~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
..+.+++.+||+.||++|||++|++++.|+....
T Consensus 268 -----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 268 -----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred -----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 2466788899999999999999999999886543
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=2.3e-29 Score=268.11 Aligned_cols=280 Identities=19% Similarity=0.170 Sum_probs=242.6
Q ss_pred CCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEE
Q 042735 25 NLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERV 103 (667)
Q Consensus 25 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 103 (667)
.+++|++|++++|.+....+..|..+++|++|+|++|.+++..+..+.. .+|++|+|++|.+++..+..+..+.+|+.|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 4789999999999999766666899999999999999999877777877 569999999999998888889999999999
Q ss_pred EeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC
Q 042735 104 IVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 104 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 183 (667)
++++|.++...+..+.++++|++|+|++|.+++..+..+..+++|++|++++|.+.+. .+..+++|+.|++++|.+.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999966555679999999999999999988888999999999999999998764 3567899999999999887
Q ss_pred CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhh
Q 042735 184 RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLG 263 (667)
Q Consensus 184 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 263 (667)
+ +...++|+.|++++|.+... |. ...++|+.|++++|.+.+. ..++.+++|++|+|++|.+++..|..+.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 4 33456899999999998765 33 2357899999999999853 5789999999999999999998899999
Q ss_pred cccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 264 NLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 264 ~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
.+++|+.|++++|++.+ +|..+..+++|++|++++|.+. .+|..+..++.+..+
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 99999999999998754 6777788999999999999996 567666555555444
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.7e-29 Score=283.97 Aligned_cols=280 Identities=19% Similarity=0.162 Sum_probs=246.1
Q ss_pred CCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEE
Q 042735 25 NLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERV 103 (667)
Q Consensus 25 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 103 (667)
.+.+++.|++++|.+....+..|.++++|++|+|++|.+++..|..+.. .+|+.|+|++|.+++..+..+..+++|+.|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 4688999999999999777777899999999999999999888878877 469999999999999888889999999999
Q ss_pred EeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC
Q 042735 104 IVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 104 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 183 (667)
++++|.+++..+..+.++++|+.|+|++|.+++..+..|+.+++|++|++++|.+.+.. +..+++|+.|++++|.+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999776667899999999999999999999999999999999999999997652 566889999999999887
Q ss_pred CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhh
Q 042735 184 RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLG 263 (667)
Q Consensus 184 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 263 (667)
+ +...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +..++.+++|+.|+|++|.+++..|..++
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 5 344568999999999987554332 3689999999999986 46789999999999999999999999999
Q ss_pred cccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 264 NLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 264 ~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
.+++|+.|+|++|.+.+ +|..+..+++|+.|++++|.+. .+|..+..++.+..+
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 99999999999999765 6877888999999999999997 678776665555544
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=9.1e-29 Score=280.50 Aligned_cols=310 Identities=20% Similarity=0.169 Sum_probs=247.2
Q ss_pred EEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccccc
Q 042735 7 ELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNH 85 (667)
Q Consensus 7 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~ 85 (667)
..+-++-.++. +|..+ -+++++|||++|+|++..|.+|.++++|++|+|++|+|++..|..|.. .+|++|+|++|+
T Consensus 35 ~~~c~~~~l~~-vP~~l--p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFYK-IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCSS-CCSSS--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcCc-cCCCC--CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 44556666775 56544 258999999999999888889999999999999999999877888887 569999999999
Q ss_pred ccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccc-cchhhhcCCCCCEEECcCCccCCccCc
Q 042735 86 FTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGT-ISEAFGIYLNLTFLDISDNNFFGEIAS 164 (667)
Q Consensus 86 l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~ 164 (667)
+++..+..|.++.+|+.|++++|++++..+..++++++|++|+|++|.+++. .|..++.+++|++|++++|++.+..+.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9988888899999999999999999988788899999999999999999764 578899999999999999988654443
Q ss_pred cCCCC---------------------------------------------------------------------------
Q 042735 165 NWGKC--------------------------------------------------------------------------- 169 (667)
Q Consensus 165 ~~~~l--------------------------------------------------------------------------- 169 (667)
.+..+
T Consensus 192 ~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 192 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred cccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 32211
Q ss_pred --------------------------------------------------------CCCCEEEccCCcCCCCcCc-----
Q 042735 170 --------------------------------------------------------PKLSTLNVSMNNITRSIPL----- 188 (667)
Q Consensus 170 --------------------------------------------------------~~L~~L~L~~n~l~~~~p~----- 188 (667)
..|+.|++.+|.+.+..+.
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L 351 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSL 351 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTC
T ss_pred ccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhh
Confidence 1233333333333221111
Q ss_pred --------------cccCCCCcCeeeccCCcccc----------------------------------------------
Q 042735 189 --------------EIGNLSTLNEFDLSLNHIVG---------------------------------------------- 208 (667)
Q Consensus 189 --------------~~~~l~~L~~L~L~~n~l~~---------------------------------------------- 208 (667)
....+++|+.|+++.|.+..
T Consensus 352 ~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~ 431 (635)
T 4g8a_A 352 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSN 431 (635)
T ss_dssp CEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSE
T ss_pred hhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcc
Confidence 11235567777777665421
Q ss_pred ---c-CCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcC-CccchhhhhcccCCCeecCCCccCccccc
Q 042735 209 ---K-IPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRF-SSLIPESLGNLLKLHYLDLSKYQFIQELP 283 (667)
Q Consensus 209 ---~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~ls~n~~~~~~p 283 (667)
. .+..|..+.+++.++++.|.+.+..+..+..+++|+.|+|++|.+ .+..|..+..+++|+.|+|++|++.+..|
T Consensus 432 ~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~ 511 (635)
T 4g8a_A 432 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 511 (635)
T ss_dssp EESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcCh
Confidence 0 113456778889999999999988899999999999999999975 45578899999999999999999999999
Q ss_pred hhhhcCCCCCEEECcCCCCCCcCcccccCCcccccc
Q 042735 284 KELGKLVQLSELELSHNFLGREIPSQICSMECCEVF 319 (667)
Q Consensus 284 ~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~~~~~ 319 (667)
..|..+++|++|+|++|.+.+..|..+..+..++.+
T Consensus 512 ~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 512 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred HHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 999999999999999999988777777777666655
No 287
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=7.5e-31 Score=277.79 Aligned_cols=231 Identities=17% Similarity=0.227 Sum_probs=165.5
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-----------CCCeeEEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-----------HRNIVKFYG 488 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~~~g 488 (667)
++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++.+++ ||||+++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 5788899999999999999986 56888999998642 234467889999999887 899999999
Q ss_pred EEEeCC----ceEEEEEecCCCChHHHhccc--------------------------c-CCcccccccCCeeec------
Q 042735 489 FCSHAR----HSILIYEYLKRGSLATNLSND--------------------------A-AAEELDISSKNVLLD------ 531 (667)
Q Consensus 489 ~~~~~~----~~~lv~ey~~~g~L~~~l~~~--------------------------~-~~~~~dlk~~NiLld------ 531 (667)
++...+ ..++||||+ +|+|.+.+... . ...|.||||+|||++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 998654 789999999 88988776431 1 233459999999994
Q ss_pred CCCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhh-h
Q 042735 532 LEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSV-I 604 (667)
Q Consensus 532 ~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~-~ 604 (667)
..+.+||+|||+++..... .+...||+.|+||| |+.++|||||||++|||+||+.||............ .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp TEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred CcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 4458999999999876432 23457999999999 688999999999999999999998633211000000 0
Q ss_pred hhhhccccCC-----------------------CCCC------------CCCchHHHHHHHHHHHHhccccCCCCCCCHH
Q 042735 605 NMRLDEMLDP-----------------------RLPP------------PSPDVQGKLISIMEVAFSCLDVSPESRPTMQ 649 (667)
Q Consensus 605 ~~~~~~~~~~-----------------------~~~~------------~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ 649 (667)
...+...+.. .... ...........+.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 0000000000 0000 0000123345677899999999999999999
Q ss_pred HHHHHHHHhhh
Q 042735 650 TITQQLLFSLV 660 (667)
Q Consensus 650 ev~~~l~~~~~ 660 (667)
|++++.||...
T Consensus 330 ell~hp~f~~~ 340 (373)
T 1q8y_A 330 GLVNHPWLKDT 340 (373)
T ss_dssp HHHTCGGGTTC
T ss_pred HHhhChhhhcc
Confidence 99999998754
No 288
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=3.6e-30 Score=279.70 Aligned_cols=227 Identities=18% Similarity=0.229 Sum_probs=164.7
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCceEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-RNIVKFYGFCSHARHSIL 498 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~g~~~~~~~~~l 498 (667)
++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|++++..++| +++..+..++.+.+..++
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 5788999999999999999986 5688999998754322 1247789999999986 666677777788889999
Q ss_pred EEEecCCCChHHHhcccc-------------------------CCcccccccCCeee---cCCCceEEecccccccccCC
Q 042735 499 IYEYLKRGSLATNLSNDA-------------------------AAEELDISSKNVLL---DLEHKAHVSDFGIAKFLKPD 550 (667)
Q Consensus 499 v~ey~~~g~L~~~l~~~~-------------------------~~~~~dlk~~NiLl---d~~~~~kl~DFGla~~~~~~ 550 (667)
||||+ +|+|.+++.... ...|.||||+|||+ +.++.+||+|||+++.....
T Consensus 81 vme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred EEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999 999998875311 11234999999999 68899999999999876543
Q ss_pred CCC-------cccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCC
Q 042735 551 SSN-------WSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLP 617 (667)
Q Consensus 551 ~~~-------~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (667)
... .....||+.|+||| |+.++|||||||++|||+||+.||........... ........+.....
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~-~~~i~~~~~~~~~~ 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK-YEKISEKKVATSIE 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH-HHHHHHHHHHSCHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH-HHHHhhccccccHH
Confidence 221 22568999999998 56789999999999999999999864332111000 00000000000000
Q ss_pred CCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHh
Q 042735 618 PPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFS 658 (667)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~ 658 (667)
. .......++.+++..||+.+|++||++++|++.+...
T Consensus 239 ~---l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 239 A---LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp H---HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred H---HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0 0001123567888999999999999999999877654
No 289
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=4.4e-30 Score=269.74 Aligned_cols=233 Identities=19% Similarity=0.258 Sum_probs=167.2
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CC-ceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC------eeEEEEEEEe
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SK-EFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN------IVKFYGFCSH 492 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~-~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~~~g~~~~ 492 (667)
++|+..+.||+|+||.||+|... ++ ..||||++... ....+.+.+|++++++++|++ ++.+++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 57888999999999999999864 34 68999998642 234567889999999998777 9999999999
Q ss_pred CCceEEEEEecCCCChHHHhcccc--------------------------CCcccccccCCeee----------------
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA--------------------------AAEELDISSKNVLL---------------- 530 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~--------------------------~~~~~dlk~~NiLl---------------- 530 (667)
.+..++||||+ +|++.+.+.... ...|.||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999999 566655553321 11234999999999
Q ss_pred ---cCCCceEEecccccccccCCCCCcccccccccccCCC------CCCCchHHHHHHHHHHHHhCCCCCCCCccCC---
Q 042735 531 ---DLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPD------YRKKCDVYSFRVLALEVIKGKHPRGFVSSIL--- 598 (667)
Q Consensus 531 ---d~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE------~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~--- 598 (667)
+.++.+||+|||+++..... .....||+.|+||| |+.++|||||||++|||+||+.||.......
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred ccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 67889999999999864432 23568999999999 6789999999999999999999986322100
Q ss_pred -------CChhhh--hhhhc-cccCC--CCCCC-----------------CCchHHHHHHHHHHHHhccccCCCCCCCHH
Q 042735 599 -------PSPSVI--NMRLD-EMLDP--RLPPP-----------------SPDVQGKLISIMEVAFSCLDVSPESRPTMQ 649 (667)
Q Consensus 599 -------~~~~~~--~~~~~-~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ 649 (667)
+.+... ..... ..... .++.. ..........+.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 000000 00000 00000 00000 000012234677899999999999999999
Q ss_pred HHHHHHHHhhhhh
Q 042735 650 TITQQLLFSLVYF 662 (667)
Q Consensus 650 ev~~~l~~~~~~~ 662 (667)
|++++.||.....
T Consensus 330 e~l~hp~f~~~~~ 342 (355)
T 2eu9_A 330 EALLHPFFAGLTP 342 (355)
T ss_dssp HHTTSGGGGGCCH
T ss_pred HHhcChhhcCCCh
Confidence 9999999986543
No 290
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=5.9e-30 Score=260.17 Aligned_cols=212 Identities=9% Similarity=0.028 Sum_probs=157.8
Q ss_pred cCCcCcceeecccCeEEEEEEeC-CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv 499 (667)
++|...+.||+|+||.||+|+.. +++.||||++....... ....+.|.+|+.++++++|||||++++++.+.+..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP-DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC-HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 46888899999999999999875 48899999987654322 23456799999999999999999999999999999999
Q ss_pred EEecCCCChHHHhcccc----------------------CCcccccccCCeeecCCCceEEecccccccccCCCCCcccc
Q 042735 500 YEYLKRGSLATNLSNDA----------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSAL 557 (667)
Q Consensus 500 ~ey~~~g~L~~~l~~~~----------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~ 557 (667)
|||+++|+|.+++.... ...|.||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~--------------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA--------------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC---------------
T ss_pred EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc---------------
Confidence 99999999998875432 11244999999999999999998443
Q ss_pred cccccccCCCCCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhc
Q 042735 558 VGTYRYVAPDYRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSC 637 (667)
Q Consensus 558 ~Gt~~y~aPE~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 637 (667)
|++| ++.++|||||||++|||+||+.||............ ........+.+..........+.+++.+|
T Consensus 175 -----~~~~-~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 243 (286)
T 3uqc_A 175 -----TMPD-ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----ERDTAGQPIEPADIDRDIPFQISAVAARS 243 (286)
T ss_dssp -----CCTT-CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----CBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred -----ccCC-CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----HHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence 4444 688999999999999999999998643321100000 00001111100000001122467888899
Q ss_pred cccCCCCCCCHHHHHHHHHHhhh
Q 042735 638 LDVSPESRPTMQTITQQLLFSLV 660 (667)
Q Consensus 638 l~~~p~~RPt~~ev~~~l~~~~~ 660 (667)
|+.||++| |+.|+++.|.....
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC
T ss_pred cccCCccC-CHHHHHHHHHHHhc
Confidence 99999999 99999999987654
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.1e-29 Score=260.34 Aligned_cols=213 Identities=19% Similarity=0.277 Sum_probs=154.1
Q ss_pred HcCCcCc-ceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHH-HhcCCCCeeEEEEEEEe----
Q 042735 420 INDFDAK-YCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEAL-TKIRHRNIVKFYGFCSH---- 492 (667)
Q Consensus 420 ~~~f~~~-~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~~~g~~~~---- 492 (667)
.++|... +.||+|+||.||+|.. .+++.||||++.. ...+.+|++++ +..+||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 3567666 7799999999999986 5678999999753 13467889887 56689999999999987
Q ss_pred CCceEEEEEecCCCChHHHhcccc---C-----------------------CcccccccCCeeecC---CCceEEecccc
Q 042735 493 ARHSILIYEYLKRGSLATNLSNDA---A-----------------------AEELDISSKNVLLDL---EHKAHVSDFGI 543 (667)
Q Consensus 493 ~~~~~lv~ey~~~g~L~~~l~~~~---~-----------------------~~~~dlk~~NiLld~---~~~~kl~DFGl 543 (667)
....++||||+++|+|.+.+.... . ..|.||||+||+++. ++.+||+|||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 677899999999999998886432 1 113499999999998 78999999999
Q ss_pred cccccCCCCCcccccccccccCCCCCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCch
Q 042735 544 AKFLKPDSSNWSALVGTYRYVAPDYRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDV 623 (667)
Q Consensus 544 a~~~~~~~~~~~~~~Gt~~y~aPE~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (667)
++.... ..|+.++|||||||++|||+||+.||............ ...........+.+..
T Consensus 167 a~~~~~----------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 226 (299)
T 3m2w_A 167 AKETTG----------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KTRIRMGQYEFPNPEW 226 (299)
T ss_dssp CEECTT----------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS----CCSSCTTCCSSCHHHH
T ss_pred cccccc----------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH----HHHHhhccccCCchhc
Confidence 975431 12567899999999999999999998532211100000 0011111111111111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhhhh
Q 042735 624 QGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSLVY 661 (667)
Q Consensus 624 ~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~~~ 661 (667)
......+.+++.+||+.||++|||++|++++.|+....
T Consensus 227 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred ccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 11223567888899999999999999999999997554
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=9.2e-30 Score=290.15 Aligned_cols=211 Identities=21% Similarity=0.256 Sum_probs=159.4
Q ss_pred cCCcCcceeecccCeEEEEEEeC--CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCc---
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELP--SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSHARH--- 495 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~--- 495 (667)
++|...+.||+|+||.||+|... +++.||||++.... .....+.|.+|++++++++|||||++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 57889999999999999999875 57889999876432 23345678999999999999999999999988765
Q ss_pred --eEEEEEecCCCChHHHhccc----------------------cCCcccccccCCeeecCCCceEEecccccccccCCC
Q 042735 496 --SILIYEYLKRGSLATNLSND----------------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDS 551 (667)
Q Consensus 496 --~~lv~ey~~~g~L~~~l~~~----------------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~ 551 (667)
.|+||||+++|+|.+.+... ....|.||||+|||++.+ .+||+|||+++.....
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~- 234 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF- 234 (681)
T ss_dssp EEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-
T ss_pred ceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC-
Confidence 79999999999998765431 112345999999999975 8999999999876433
Q ss_pred CCcccccccccccCCC-----CCCCchHHHHHHHHHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHH
Q 042735 552 SNWSALVGTYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGK 626 (667)
Q Consensus 552 ~~~~~~~Gt~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (667)
+...||+.|+||| ++.++|||||||++|||++|..|+..... + .++.. ......
T Consensus 235 ---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~-~~~~~-~~~~~~ 293 (681)
T 2pzi_A 235 ---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYV----------------D-GLPED-DPVLKT 293 (681)
T ss_dssp ---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEEC----------------S-SCCTT-CHHHHH
T ss_pred ---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccc----------------c-ccccc-cccccc
Confidence 3467999999999 46789999999999999999888642110 0 01111 111112
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHHHH
Q 042735 627 LISIMEVAFSCLDVSPESRPTMQTITQQLLF 657 (667)
Q Consensus 627 ~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~ 657 (667)
...+.+++.+||+.||++||+..+.+.+.++
T Consensus 294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 2356788899999999999976665555443
No 293
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=3.6e-28 Score=263.11 Aligned_cols=271 Identities=25% Similarity=0.319 Sum_probs=133.1
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
++|+.|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +|. ++. .+|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp~-~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LPE-LQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CCC-CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Ccc-cCCCCCCCEEEC
Confidence 456777777777766 3432 2455555555555543 2211 1345555555555543 442 333 33555555
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
++|.+++ +|..+ .+|+.|++++|++++ +| .+.++++|+.|++++|.+++. |.. ..+|++|++++|.+. .
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~n~l~-~ 229 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILE-E 229 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCS-S
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcCCcCC-c
Confidence 5555543 22221 245555555555544 23 345555555555555554431 111 124445555554443 3
Q ss_pred cCccCCCCCCCCEEEccCCcCCCCcCccc-----------------cCCCCcCeeeccCCcccccCCccccCCcccceee
Q 042735 162 IASNWGKCPKLSTLNVSMNNITRSIPLEI-----------------GNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLI 224 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-----------------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 224 (667)
+| .+..+++|+.|++++|++++ +|..+ ..+++|+.|++++|.+.+. |.. .++|+.|+
T Consensus 230 lp-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~ 303 (454)
T 1jl5_A 230 LP-ELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL-SEL---PPNLYYLN 303 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEE-SCC---CTTCCEEE
T ss_pred cc-ccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCcccCcCCEEECcCCccCcc-cCc---CCcCCEEE
Confidence 33 24444445555554444443 22111 0123444444444444431 100 12344444
Q ss_pred cccccccccCcccccCC-CCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 225 LRGNQLIGHLPSEIGSL-TKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 225 L~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
+++|.+.+ +..+ ++|++|++++|++++ +|.. +++|+.|++++|++. .+|. .+++|++|++++|.+.
T Consensus 304 l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 304 ASSNEIRS-----LCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLR 370 (454)
T ss_dssp CCSSCCSE-----ECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCS
T ss_pred CcCCcCCc-----ccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCC
Confidence 44444332 1122 477777777777776 3433 467777777777755 4565 3567777777777777
Q ss_pred C--cCcccccCC
Q 042735 304 R--EIPSQICSM 313 (667)
Q Consensus 304 ~--~ip~~~~~~ 313 (667)
+ .+|..+..+
T Consensus 371 ~l~~ip~~l~~L 382 (454)
T 1jl5_A 371 EFPDIPESVEDL 382 (454)
T ss_dssp SCCCCCTTCCEE
T ss_pred cCCCChHHHHhh
Confidence 6 666665544
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.3e-28 Score=253.07 Aligned_cols=248 Identities=22% Similarity=0.248 Sum_probs=177.3
Q ss_pred cEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeecccccccee--CCCCCc-ccccCEEEcc
Q 042735 6 RELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGS--IPPSVG-NLMLTVLALE 82 (667)
Q Consensus 6 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~~-~~~L~~L~L~ 82 (667)
+.++++++.++.+ |..+ .++|++|+|++|+++...+..|.++++|++|+|++|+++.. .|..+. ..+|++|+|+
T Consensus 10 ~~l~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcccC-CCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 5688899988864 5544 36899999999999865555688999999999999988733 233332 3568888888
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccC-ccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC-
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIP-KCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG- 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~- 160 (667)
+|.+.. ++..+..+.+|+.|++++|.+++..+ ..+..+++|+.|++++|.+++..+..+..+++|++|++++|.+.+
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 888763 45556677777777777777766544 456777777777777777776666677777777777777777765
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccC
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGS 240 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 240 (667)
..|..+..+++|+.|++++|.+++..|..+.++++|++|+|++|.+.+..+..+..+++|+.|++++|.+.+..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 45666777777777777777777666666777777777777777776655556667777777777777777666666666
Q ss_pred CC-CCCeeeccCCcCCcc
Q 042735 241 LT-KLEFLNLSTNRFSSL 257 (667)
Q Consensus 241 l~-~L~~L~Ls~N~l~~~ 257 (667)
++ +|++|+|++|.+++.
T Consensus 246 ~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCTTCCEEECTTCCEECS
T ss_pred hhccCCEEEccCCCeecc
Confidence 63 677777777776553
No 295
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.1e-28 Score=252.51 Aligned_cols=234 Identities=21% Similarity=0.279 Sum_probs=165.3
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
++++.|+|++|.++. +|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.. .+|+.|+|
T Consensus 81 ~~l~~L~L~~n~l~~-lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCSS-CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCchh-cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 455555666555552 3444555555666666655555 45555555555555555555555 44444443 23555555
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
++|.+.+.+|..+... .++..+.++++|++|+|++|+++ .+|..++.+++|++|++++|.+.+
T Consensus 158 ~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 158 RACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-
Confidence 5544444444333210 01112345888888888888887 667778888889999998888874
Q ss_pred cCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCC
Q 042735 162 IASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSL 241 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 241 (667)
+|..+..+++|+.|+|++|.+.+.+|..++++++|+.|+|++|.+.+.+|..+.++++|+.|+|++|.+.+.+|..++.+
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 56678888899999999988888888888889999999999988888888889999999999999998888999999999
Q ss_pred CCCCeeeccCCcCCc
Q 042735 242 TKLEFLNLSTNRFSS 256 (667)
Q Consensus 242 ~~L~~L~Ls~N~l~~ 256 (667)
++|+.+++..|.+..
T Consensus 301 ~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 301 PANCIILVPPHLQAQ 315 (328)
T ss_dssp CTTCEEECCGGGSCC
T ss_pred cCceEEeCCHHHHHH
Confidence 999999888776654
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=259.26 Aligned_cols=278 Identities=16% Similarity=0.185 Sum_probs=179.5
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEE
Q 042735 26 LKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVI 104 (667)
Q Consensus 26 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 104 (667)
++...+.++++|.++ .+|..+. ++|++|+|++|++++..+..+.. .+|+.|+|++|.+++..+..+.++.+|+.|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 444445555555555 3444332 35555555555555443334443 3455555555555555555555566666666
Q ss_pred eeCcccccccCccCCCCCCCcEEEccCCccccccc-hhhhcCCCCCEEECcCCc-cCCccCccCCCCCCCCEEEccCCcC
Q 042735 105 VGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTIS-EAFGIYLNLTFLDISDNN-FFGEIASNWGKCPKLSTLNVSMNNI 182 (667)
Q Consensus 105 l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l 182 (667)
+++|++++..+..+.++++|++|+|++|.++...+ ..+..+++|++|++++|. +.+..+..|..+++|+.|++++|.+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 66666665444446667777777777777765443 456677777777777763 4444456677777777777777777
Q ss_pred CCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccc---cCCCCCCeeeccCCcCCcc--
Q 042735 183 TRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEI---GSLTKLEFLNLSTNRFSSL-- 257 (667)
Q Consensus 183 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~-- 257 (667)
.+..|..+.++++|++|++++|.+....+..+..+++|+.|++++|.+.+..+..+ .....++.++|+++.+++.
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l 266 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL 266 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHH
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcch
Confidence 76667777777777777777777653333334456777777777777766544433 2356778888888887653
Q ss_pred --chhhhhcccCCCeecCCCccCccccchh-hhcCCCCCEEECcCCCCCCcCc
Q 042735 258 --IPESLGNLLKLHYLDLSKYQFIQELPKE-LGKLVQLSELELSHNFLGREIP 307 (667)
Q Consensus 258 --~p~~~~~l~~L~~L~ls~n~~~~~~p~~-l~~l~~L~~L~l~~n~l~~~ip 307 (667)
+|.++..+++|+.|++++|++. .+|.. ++.+++|++|++++|++....|
T Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 267 FQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6778888899999999999876 56655 5888999999999998876554
No 297
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.4e-28 Score=252.13 Aligned_cols=223 Identities=19% Similarity=0.267 Sum_probs=183.6
Q ss_pred ccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECc
Q 042735 75 MLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDIS 154 (667)
Q Consensus 75 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~ 154 (667)
.++.|+|++|.++ .+|..+..+.+|++|++++|.++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4666666666665 55566666777777777777777 67777778888888888888887 567778888888888888
Q ss_pred CCccCCccCccCCC---------CCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeec
Q 042735 155 DNNFFGEIASNWGK---------CPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLIL 225 (667)
Q Consensus 155 ~n~l~~~~~~~~~~---------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 225 (667)
+|.+.+.+|..+.. +++|+.|+|++|.++ .+|..+.++++|++|+|++|.+.+ +|..++.+++|+.|++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 87777777776654 888999999999888 677888889999999999998885 5667888999999999
Q ss_pred ccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCC
Q 042735 226 RGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFL 302 (667)
Q Consensus 226 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l 302 (667)
++|.+.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.|++++|++.+.+|.+++.+++|+.+++..|.+
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 99888888888899999999999999888888898899999999999999999999999999999999998887755
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.5e-28 Score=258.12 Aligned_cols=277 Identities=15% Similarity=0.103 Sum_probs=232.7
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALE 82 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~ 82 (667)
.....++++|.++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+.. .+|++|+|+
T Consensus 32 ~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 34567889999986 465543 58999999999999877779999999999999999999888887877 569999999
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccC-ccCCCCCCCcEEEccCC-ccccccchhhhcCCCCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIP-KCLRNCPNLVRISLEGN-NMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n-~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+|.+++..+..+..+.+|+.|++++|.+++..+ ..+.++++|++|++++| .+....+..|..+++|++|++++|.+.+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc
Confidence 999987666668899999999999999986544 47899999999999999 5777778889999999999999999998
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCcccc---CCcccceeecccccccc----c
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFG---KLNSLTKLILRGNQLIG----H 233 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~---~l~~L~~L~L~~n~l~~----~ 233 (667)
..|..+..+++|+.|++++|.+....+..+..+++|+.|++++|.+.+..+..+. ....++.++++++.+.+ .
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~ 268 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ 268 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHH
T ss_pred cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhh
Confidence 8899999999999999999999754444456689999999999999876555443 45677888888887765 4
Q ss_pred CcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccc
Q 042735 234 LPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELP 283 (667)
Q Consensus 234 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p 283 (667)
+|..++.+++|+.|+|++|+++...+..+..+++|+.|++++|++.+..|
T Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 269 VMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 67788999999999999999996544446899999999999999877655
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.9e-28 Score=250.51 Aligned_cols=261 Identities=22% Similarity=0.217 Sum_probs=220.7
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccc--cCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEE
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRG--SLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVL 79 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L 79 (667)
++|+.|+|++|.++.+.+..|.++++|++|+|++|+++. ..|..+..+++|++|+|++|.+.. +|..+.. .+|+.|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEE
Confidence 479999999999998766778999999999999999983 336788889999999999999985 5555555 579999
Q ss_pred EcccccccccCC-ccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCcccc-ccchhhhcCCCCCEEECcCCc
Q 042735 80 ALENNHFTGNLR-HNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRG-TISEAFGIYLNLTFLDISDNN 157 (667)
Q Consensus 80 ~L~~n~l~~~~~-~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~-~~~~~~~~l~~L~~L~L~~n~ 157 (667)
+|++|.+++..+ ..+..+.+|+.|++++|.+.+..+..+..+++|++|+|++|.+++ ..|..+..+++|++|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999987665 578889999999999999999999999999999999999999987 578899999999999999999
Q ss_pred cCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCc-ccceeecccccccccCc-
Q 042735 158 FFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLN-SLTKLILRGNQLIGHLP- 235 (667)
Q Consensus 158 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p- 235 (667)
+.+..|..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+.+..|..+..++ +|+.|++++|.+...-+
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 9988899999999999999999999988887899999999999999999999999999985 99999999999875422
Q ss_pred -ccccCCCCCCeeeccCCcCCccchhhhhc
Q 042735 236 -SEIGSLTKLEFLNLSTNRFSSLIPESLGN 264 (667)
Q Consensus 236 -~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 264 (667)
.....+..++.+.+..+.+....|..+.+
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred HHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 11222333444444445555444554443
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.8e-27 Score=255.86 Aligned_cols=245 Identities=25% Similarity=0.240 Sum_probs=164.3
Q ss_pred CCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEeeC
Q 042735 29 LVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGG 107 (667)
Q Consensus 29 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~ 107 (667)
...++.+++.++ .+|..+. ++|++|+|++|+|++..|..+.. .+|+.|+|++|.+++..+..+.++.+|+.|++++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 345555555554 3444332 45555555555555554555544 3355555555555555555566666666666666
Q ss_pred cccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC-ccCCCCCCCCEEEccCCcCCCCc
Q 042735 108 NHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA-SNWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 108 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
|++++..+..+..+++|++|+|++|.++...+..|..+++|+.|++++|...+.++ ..|..+++|+.|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 66665555667777777777777777776666677777777777777744334443 4577777777777777777653
Q ss_pred CccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhccc
Q 042735 187 PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLL 266 (667)
Q Consensus 187 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 266 (667)
| .+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+.+..+..|.++++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 3 467777777888887777777777777777888888888877777777777777888888888887777666777777
Q ss_pred CCCeecCCCccC
Q 042735 267 KLHYLDLSKYQF 278 (667)
Q Consensus 267 ~L~~L~ls~n~~ 278 (667)
+|+.|++++|.+
T Consensus 291 ~L~~L~L~~Np~ 302 (452)
T 3zyi_A 291 YLVELHLHHNPW 302 (452)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEccCCCc
Confidence 788888877764
No 301
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=8e-28 Score=260.34 Aligned_cols=269 Identities=22% Similarity=0.277 Sum_probs=192.7
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCC-------------CeeeccccccceeCC
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSL-------------RYLFLFENNLSGSIP 68 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~p 68 (667)
.++|+.|++++|.+ +.+|.+++++++|++|++++|++.+.+|.+++++++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 46899999999999 6789999999999999999999999999999999875 999999999875 45
Q ss_pred CCCcccccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCC
Q 042735 69 PSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNL 148 (667)
Q Consensus 69 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 148 (667)
.. ..+|+.|++++|.+++ +|.. ..+|+.|++++|++++. |.. .++|++|++++|++++ +| .++.+++|
T Consensus 88 ~~--~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 88 EL--PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp SC--CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred CC--cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 42 2469999999999987 5543 37889999999988752 221 1689999999999886 55 58888999
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
++|++++|++.+ +|.. ..+|++|++++|.+++ +| .++++++|++|++++|.+.+ +|... ++|+.|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 999999998875 5543 3588999999998886 55 58888999999999988875 44332 57888899888
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
.+. .+| .++.+++|++|++++|++++. |.. +++|+.|++++|++.+ +|.. .++|++|++++|.+.+
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 887 566 488888899999998888863 432 3678888888888654 5543 3678888888888765
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.5e-27 Score=242.52 Aligned_cols=225 Identities=20% Similarity=0.227 Sum_probs=138.2
Q ss_pred cEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccccc
Q 042735 6 RELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNH 85 (667)
Q Consensus 6 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~ 85 (667)
+.++.+++.++.+ |..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+..
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------------ 78 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG------------ 78 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT------------
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCC------------
Confidence 4566666666643 4332 356777777777776655566666777777777666666544444433
Q ss_pred ccccCCccccCCCCccEEEeeCcc-cccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCc
Q 042735 86 FTGNLRHNICRNGALERVIVGGNH-FRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIAS 164 (667)
Q Consensus 86 l~~~~~~~~~~~~~L~~L~l~~n~-~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 164 (667)
+.+|+.|++++|. +....|..+..+++|++|+|++|.+++..+..+..+++|++|++++|.+.+..+.
T Consensus 79 -----------l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 79 -----------LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp -----------CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred -----------ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh
Confidence 3333344444443 3333345566666666666666666665566666666666666666666655555
Q ss_pred cCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCC
Q 042735 165 NWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKL 244 (667)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 244 (667)
.|..+++|+.|+|++|.+++..+..+.++++|+.|+|++|.+.+..|..|..+++|+.|++++|.+.+..+..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 56666666666666666665544456666666666666666666666666666666666666666665555556666666
Q ss_pred CeeeccCCcCCc
Q 042735 245 EFLNLSTNRFSS 256 (667)
Q Consensus 245 ~~L~Ls~N~l~~ 256 (667)
+.|++++|.+..
T Consensus 228 ~~L~l~~N~~~c 239 (285)
T 1ozn_A 228 QYLRLNDNPWVC 239 (285)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEeccCCCccC
Confidence 666666666654
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.4e-27 Score=242.71 Aligned_cols=205 Identities=19% Similarity=0.154 Sum_probs=132.5
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccc-cceeCCCCCcc-cccCEEE
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENN-LSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~-~~L~~L~ 80 (667)
++|+.|+|++|.++++.+..|.++++|++|+|++|++++..|..|.++++|++|+|++|. +....|..+.. .+|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 589999999999999888889999999999999999998889999999999999999997 76555666655 3577777
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
|++|.+++..+..+..+.+|+.|++++|.+++. .+..|+.+++|++|++++|.+.+
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQAL------------------------PDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCccccc------------------------CHhHhccCCCccEEECCCCcccc
Confidence 777766654444444445555555555544444 44444444445555555444443
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccccc
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLI 231 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 231 (667)
..+..|..+++|+.|++++|.+++..|..+.++++|+.|++++|.+.+..+..+..+++|+.|++++|.+.
T Consensus 168 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 33334444555555555555555444445555555555555555555443344555555555555555544
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.5e-27 Score=254.61 Aligned_cols=248 Identities=20% Similarity=0.190 Sum_probs=224.1
Q ss_pred CCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccC
Q 042735 52 SLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEG 131 (667)
Q Consensus 52 ~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 131 (667)
..+.++.+++.++ .+|..+. ..++.|+|++|.+++..+..+..+.+|+.|++++|++++..|..+.++++|++|+|++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCcEEEECCCCcC-ccCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 4678888888887 4666543 4699999999999999899999999999999999999999889999999999999999
Q ss_pred CccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCc-CccccCCCCcCeeeccCCcccccC
Q 042735 132 NNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSI-PLEIGNLSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 132 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~ 210 (667)
|++++..+..|..+++|++|+|++|.+.+..+..|..+++|+.|++++|+..+.+ +..|.++++|++|+|++|.+.+.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 9999888888999999999999999998777778999999999999995444444 45689999999999999999864
Q ss_pred CccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCC
Q 042735 211 PKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLV 290 (667)
Q Consensus 211 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~ 290 (667)
| .+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++.+..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 588999999999999999999999999999999999999999999999999999999999999998877777889999
Q ss_pred CCCEEECcCCCCC
Q 042735 291 QLSELELSHNFLG 303 (667)
Q Consensus 291 ~L~~L~l~~n~l~ 303 (667)
+|+.|++++|++.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 9999999999863
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.1e-27 Score=252.38 Aligned_cols=245 Identities=23% Similarity=0.251 Sum_probs=185.3
Q ss_pred CCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEeeC
Q 042735 29 LVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGG 107 (667)
Q Consensus 29 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~ 107 (667)
...++.+++.++ .+|..+. ++|+.|+|++|++++..+..+.. .+|+.|+|++|.+++..+..+.++.+|+.|++++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456666666665 4555442 55666666666666555555555 3466666666666666666677777777777777
Q ss_pred cccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCcc-CccCCCCCCCCEEEccCCcCCCCc
Q 042735 108 NHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEI-ASNWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 108 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
|+++...+..+..+++|+.|+|++|.++...+..|..+++|++|++++|...+.+ +..|.++++|+.|+|++|.++. +
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-I 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-C
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-c
Confidence 7777666667888888888888888888777778888888888888885444444 4467888888888888888874 4
Q ss_pred CccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhccc
Q 042735 187 PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLL 266 (667)
Q Consensus 187 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 266 (667)
| .+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+.+..+..|.++++|+.|+|++|++++..+..+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 477888888888888888888788888888888888888888888888888888888888888888887777788888
Q ss_pred CCCeecCCCccC
Q 042735 267 KLHYLDLSKYQF 278 (667)
Q Consensus 267 ~L~~L~ls~n~~ 278 (667)
+|+.|++++|.+
T Consensus 280 ~L~~L~L~~Np~ 291 (440)
T 3zyj_A 280 HLERIHLHHNPW 291 (440)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEcCCCCc
Confidence 888888888875
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=250.77 Aligned_cols=247 Identities=20% Similarity=0.217 Sum_probs=173.8
Q ss_pred CCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccC
Q 042735 52 SLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEG 131 (667)
Q Consensus 52 ~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 131 (667)
..+.++.+++.++ .+|..+. ..++.|+|++|++++..+..+..+.+|+.|++++|.+++..+..+.++++|++|+|++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCCEEEeCCCCcC-cCCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 3556676666665 4554433 3577777777777776667777777777777777777766666777777777777777
Q ss_pred CccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCC-cCccccCCCCcCeeeccCCcccccC
Q 042735 132 NNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRS-IPLEIGNLSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 132 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~ 210 (667)
|+++...+..|..+++|++|+|++|.+....+..|..+++|+.|+|++|+..+. .+..|.++++|++|+|++|.+.. +
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-I 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-C
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-c
Confidence 777766666677777777777777777666566777777777777777443333 33456777777777777777763 3
Q ss_pred CccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCC
Q 042735 211 PKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLV 290 (667)
Q Consensus 211 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~ 290 (667)
| .+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++.+..+..+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 3 466777777777777777776677777777777777777777777777777777777777777777666666667777
Q ss_pred CCCEEECcCCCC
Q 042735 291 QLSELELSHNFL 302 (667)
Q Consensus 291 ~L~~L~l~~n~l 302 (667)
+|+.|++++|++
T Consensus 280 ~L~~L~L~~Np~ 291 (440)
T 3zyj_A 280 HLERIHLHHNPW 291 (440)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEcCCCCc
Confidence 777777777765
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.5e-29 Score=256.03 Aligned_cols=249 Identities=21% Similarity=0.192 Sum_probs=195.6
Q ss_pred ccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccc-cccCCcccc-------CCCCccEEEeeCcccccccCccC
Q 042735 47 VGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHF-TGNLRHNIC-------RNGALERVIVGGNHFRGPIPKCL 118 (667)
Q Consensus 47 ~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l-~~~~~~~~~-------~~~~L~~L~l~~n~~~~~~p~~l 118 (667)
++..++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.++..+. .+.+|+.|++++|++++.+|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 45566677777777776 455544333 66777777776 344555444 67888888888888888888876
Q ss_pred --CCCCCCcEEEccCCccccccchhhhcC-----CCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCC--cCcc
Q 042735 119 --RNCPNLVRISLEGNNMRGTISEAFGIY-----LNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRS--IPLE 189 (667)
Q Consensus 119 --~~l~~L~~L~L~~n~~~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p~~ 189 (667)
..+++|++|+|++|++++. |..++.+ ++|++|++++|++.+..+..|..+++|+.|+|++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 8899999999999999877 7777776 8999999999999888888999999999999999988764 2334
Q ss_pred c--cCCCCcCeeeccCCccccc--CC-ccccCCcccceeecccccccccCc-ccccCCCCCCeeeccCCcCCccchhhhh
Q 042735 190 I--GNLSTLNEFDLSLNHIVGK--IP-KEFGKLNSLTKLILRGNQLIGHLP-SEIGSLTKLEFLNLSTNRFSSLIPESLG 263 (667)
Q Consensus 190 ~--~~l~~L~~L~L~~n~l~~~--~p-~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 263 (667)
+ .++++|++|+|++|.+.+. ++ ..+.++++|+.|++++|.+.+..| ..+..+++|++|+|++|.++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 4 7889999999999988731 22 334678899999999999988775 45677899999999999998 4676665
Q ss_pred cccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCC
Q 042735 264 NLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 264 ~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
++|+.|++++|++.+. |. +..+++|++|++++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7899999999987665 66 8899999999999998865
No 308
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=7.1e-29 Score=256.31 Aligned_cols=256 Identities=19% Similarity=0.190 Sum_probs=156.9
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccc
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALEN 83 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~ 83 (667)
++.++++.+.+....+..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| +.. .+|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4556667777765555556677789999999999887777888889999999999988876544 433 4577778777
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.+++.. ..++|+.|++++|.+++..+. .+++|+.|++++|++++..+..++.+++|++|++++|.+.+..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 7776432 225666666666666554332 24556666666666665555566666666666666666655544
Q ss_pred ccC-CCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCC
Q 042735 164 SNW-GKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLT 242 (667)
Q Consensus 164 ~~~-~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 242 (667)
..+ ..+++|+.|+|++|.+++. + ....+++|++|+|++|.+.+. |..+..+++|+.|++++|.+. .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 444 2456666666666665543 1 122355566666666655543 333555555666666655555 3444555555
Q ss_pred CCCeeeccCCcCC-ccchhhhhcccCCCeecCC
Q 042735 243 KLEFLNLSTNRFS-SLIPESLGNLLKLHYLDLS 274 (667)
Q Consensus 243 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls 274 (667)
+|+.|++++|.+. +.+|.++..+++|+.++++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5555555555555 4445555555555555554
No 309
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=1.3e-29 Score=276.21 Aligned_cols=303 Identities=19% Similarity=0.163 Sum_probs=161.0
Q ss_pred CCCCcEEeccCCcCcC----CCCccccCCCCCCEEEccCccccccCCcccc-CCC----CCCeeeccccccce----eCC
Q 042735 2 LTNLRELHLRDNYLTG----LIPTETWNLKSLVKLGLGGNQFRGSLPSSVG-NLS----SLRYLFLFENNLSG----SIP 68 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~----~L~~L~L~~n~l~~----~~p 68 (667)
+++|+.|+|++|.++. .++..+..+++|++|+|++|.+.+..+..+. .++ +|++|+|++|+++. .+|
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 3566777777776653 2344555666677777777766643333332 344 46677777666652 334
Q ss_pred CCCcc-cccCEEEcccccccccCCccccC-----CCCccEEEeeCcccccc----cCccCCCCCCCcEEEccCCcccccc
Q 042735 69 PSVGN-LMLTVLALENNHFTGNLRHNICR-----NGALERVIVGGNHFRGP----IPKCLRNCPNLVRISLEGNNMRGTI 138 (667)
Q Consensus 69 ~~~~~-~~L~~L~L~~n~l~~~~~~~~~~-----~~~L~~L~l~~n~~~~~----~p~~l~~l~~L~~L~L~~n~~~~~~ 138 (667)
..+.. .+|+.|+|++|.++...+..+.. ..+|+.|++++|.+++. ++..+..+++|++|+|++|.++...
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 44444 34666666666665433322221 34566666666666543 2444555566666666666665433
Q ss_pred chhhh-----cCCCCCEEECcCCccCCc----cCccCCCCCCCCEEEccCCcCCCCc-----CccccCCCCcCeeeccCC
Q 042735 139 SEAFG-----IYLNLTFLDISDNNFFGE----IASNWGKCPKLSTLNVSMNNITRSI-----PLEIGNLSTLNEFDLSLN 204 (667)
Q Consensus 139 ~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~-----p~~~~~l~~L~~L~L~~n 204 (667)
...+. ..++|++|++++|.+.+. ++..+..+++|+.|++++|.+.... +..+..+++|++|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 33332 244666666666665542 3444555566666666666554321 111224556666666666
Q ss_pred ccccc----CCccccCCcccceeecccccccccCcccccC-----CCCCCeeeccCCcCCcc----chhhhhcccCCCee
Q 042735 205 HIVGK----IPKEFGKLNSLTKLILRGNQLIGHLPSEIGS-----LTKLEFLNLSTNRFSSL----IPESLGNLLKLHYL 271 (667)
Q Consensus 205 ~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L 271 (667)
.+.+. ++..+..+++|+.|++++|.+.+..+..+.. .++|++|++++|.+++. ++..+..+++|+.|
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 346 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLEL 346 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEE
Confidence 55542 3444555566666666666554332222221 24566666666665543 34444455566666
Q ss_pred cCCCccCccccchhhhc-----CCCCCEEECcCCCCCC
Q 042735 272 DLSKYQFIQELPKELGK-----LVQLSELELSHNFLGR 304 (667)
Q Consensus 272 ~ls~n~~~~~~p~~l~~-----l~~L~~L~l~~n~l~~ 304 (667)
++++|++.+..+..+.. .++|++|++++|.++.
T Consensus 347 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 347 QISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred EccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 66666554433333332 4456666666665543
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.7e-28 Score=252.95 Aligned_cols=248 Identities=22% Similarity=0.215 Sum_probs=199.2
Q ss_pred ccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccc-eeCCCCCc--------ccccCEEEcccccccccCCcc
Q 042735 23 TWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLS-GSIPPSVG--------NLMLTVLALENNHFTGNLRHN 93 (667)
Q Consensus 23 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~--------~~~L~~L~L~~n~l~~~~~~~ 93 (667)
++..++|+.|++++|.+ .+|..+... |+.|+|++|++. ..+|..+. ..+|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45677888888888888 577766544 888888888884 45665543 356889999999988888877
Q ss_pred c--cCCCCccEEEeeCcccccccCccCCCC-----CCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc--cCc
Q 042735 94 I--CRNGALERVIVGGNHFRGPIPKCLRNC-----PNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE--IAS 164 (667)
Q Consensus 94 ~--~~~~~L~~L~l~~n~~~~~~p~~l~~l-----~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~ 164 (667)
+ ..+.+|+.|++++|.+++. |..+..+ ++|++|+|++|++++..+..|+.+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 7888999999999998877 7767666 8999999999999888888899999999999999987765 333
Q ss_pred cC--CCCCCCCEEEccCCcCCCC--cC-ccccCCCCcCeeeccCCcccccCC-ccccCCcccceeecccccccccCcccc
Q 042735 165 NW--GKCPKLSTLNVSMNNITRS--IP-LEIGNLSTLNEFDLSLNHIVGKIP-KEFGKLNSLTKLILRGNQLIGHLPSEI 238 (667)
Q Consensus 165 ~~--~~l~~L~~L~L~~n~l~~~--~p-~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~ 238 (667)
.+ ..+++|+.|+|++|.+++. ++ ..+.++++|++|+|++|.+.+..| ..+..+++|+.|+|++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 7889999999999998742 22 334678899999999999988765 45677899999999999987 677766
Q ss_pred cCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcc
Q 042735 239 GSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 239 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
. ++|++|+|++|++++. |. +..+++|+.|++++|++.+
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 8899999999999886 65 8889999999999998754
No 311
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=7.3e-28 Score=250.98 Aligned_cols=222 Identities=16% Similarity=0.195 Sum_probs=157.3
Q ss_pred cCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCC----chHHhHHHHHHHHHHHHhcC---------CCCeeEEE
Q 042735 421 NDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPS----DQIADQKEFFAEIEALTKIR---------HRNIVKFY 487 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------H~niv~~~ 487 (667)
++|+..+.||+|+||+||+|+. +++.||||++...... ......+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5688899999999999999988 6789999998654221 11122357889999998886 88888888
Q ss_pred EEEE------------------------------eCCceEEEEEecCCCChHHHhccc----------------------
Q 042735 488 GFCS------------------------------HARHSILIYEYLKRGSLATNLSND---------------------- 515 (667)
Q Consensus 488 g~~~------------------------------~~~~~~lv~ey~~~g~L~~~l~~~---------------------- 515 (667)
+++. +.+..++||||+++|++.+.+...
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 8754 267899999999999765544221
Q ss_pred --cCCcccccccCCeeecCCC--------------------ceEEecccccccccCCCCCcccccccccccCCCC-----
Q 042735 516 --AAAEELDISSKNVLLDLEH--------------------KAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY----- 568 (667)
Q Consensus 516 --~~~~~~dlk~~NiLld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~----- 568 (667)
....|.||||+|||++.++ .+||+|||+|+..... ..+||+.|||||.
T Consensus 179 ~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 179 ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGCCCS
T ss_pred HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhcCCC
Confidence 1233569999999999887 8999999999976532 3589999999993
Q ss_pred CCCchHHHHHHH-HHHHHhCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCC
Q 042735 569 RKKCDVYSFRVL-ALEVIKGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPT 647 (667)
Q Consensus 569 ~~~~DV~sfGvv-l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt 647 (667)
+.++||||+|++ .+++++|..||....|. .......... .........+.......++.+++.+||+.| |
T Consensus 254 ~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s 324 (336)
T 2vuw_A 254 DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQ-MTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S 324 (336)
T ss_dssp SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHT-CCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhh-hccCcccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence 457999998777 78889999886421110 0000011101 111111111222334557888999999976 9
Q ss_pred HHHHH-HHHHH
Q 042735 648 MQTIT-QQLLF 657 (667)
Q Consensus 648 ~~ev~-~~l~~ 657 (667)
++|++ +|.||
T Consensus 325 a~e~l~~Hp~f 335 (336)
T 2vuw_A 325 ATDLLCQHSLF 335 (336)
T ss_dssp HHHHHHHCGGG
T ss_pred HHHHHhcCCCc
Confidence 99999 88886
No 312
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.94 E-value=2e-29 Score=274.79 Aligned_cols=307 Identities=17% Similarity=0.117 Sum_probs=227.0
Q ss_pred CCCCcEEeccCCcCcCCCCcc-ccCCCCCCEEEccCccccc----cCCccccCCCCCCeeeccccccceeCCCCCcc--c
Q 042735 2 LTNLRELHLRDNYLTGLIPTE-TWNLKSLVKLGLGGNQFRG----SLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN--L 74 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~--~ 74 (667)
+++|+.|+|++|.++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+.+..+..+.. .
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 457888999999887644333 6678899999999998874 34667788899999999999886533322211 1
Q ss_pred ----ccCEEEcccccccc----cCCccccCCCCccEEEeeCcccccccCcc-----CCCCCCCcEEEccCCcccccc---
Q 042735 75 ----MLTVLALENNHFTG----NLRHNICRNGALERVIVGGNHFRGPIPKC-----LRNCPNLVRISLEGNNMRGTI--- 138 (667)
Q Consensus 75 ----~L~~L~L~~n~l~~----~~~~~~~~~~~L~~L~l~~n~~~~~~p~~-----l~~l~~L~~L~L~~n~~~~~~--- 138 (667)
+|++|+|++|.++. .++..+..+++|+.|++++|.+++..+.. ....++|++|+|++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 48999999998874 45777888889999999999887543332 233568999999999887643
Q ss_pred -chhhhcCCCCCEEECcCCccCCccCccCC-----CCCCCCEEEccCCcCCCC----cCccccCCCCcCeeeccCCcccc
Q 042735 139 -SEAFGIYLNLTFLDISDNNFFGEIASNWG-----KCPKLSTLNVSMNNITRS----IPLEIGNLSTLNEFDLSLNHIVG 208 (667)
Q Consensus 139 -~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~ 208 (667)
+..+..+++|++|++++|.+....+..+. ..++|+.|++++|.++.. ++..+..+++|++|++++|.+.+
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 55667788999999999887654443332 356899999999988763 46667788899999999988765
Q ss_pred cC-----CccccCCcccceeeccccccccc----CcccccCCCCCCeeeccCCcCCccchhhhhcc-----cCCCeecCC
Q 042735 209 KI-----PKEFGKLNSLTKLILRGNQLIGH----LPSEIGSLTKLEFLNLSTNRFSSLIPESLGNL-----LKLHYLDLS 274 (667)
Q Consensus 209 ~~-----p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~ls 274 (667)
.. +..+..+++|+.|++++|.++.. ++..+..+++|++|++++|.+.+..+..+... ++|+.|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 32 22234578899999999988753 56677778899999999998876545444432 589999999
Q ss_pred CccCccc----cchhhhcCCCCCEEECcCCCCCCcCcc
Q 042735 275 KYQFIQE----LPKELGKLVQLSELELSHNFLGREIPS 308 (667)
Q Consensus 275 ~n~~~~~----~p~~l~~l~~L~~L~l~~n~l~~~ip~ 308 (667)
+|.+.+. ++..+..+++|++|++++|.++...+.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 9887655 567777888999999999988654443
No 313
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.94 E-value=5.2e-28 Score=259.04 Aligned_cols=217 Identities=12% Similarity=0.052 Sum_probs=147.9
Q ss_pred cCCcCcceeecccCeEEEEEEe-CCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC-CCe---------------
Q 042735 421 NDFDAKYCIGSGRHGSVYRAEL-PSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH-RNI--------------- 483 (667)
Q Consensus 421 ~~f~~~~~lg~g~~g~vy~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~ni--------------- 483 (667)
..|...+.||+|+||.||+|.. .+++.||||++...... .....+.|.+|+.+++.++| +|.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3566778999999999999985 56889999988743222 22334679999999999987 221
Q ss_pred ------eEEEEEEEe-----CCceEEEEEecCCCChHHHhcc--------c-----------------------cCCccc
Q 042735 484 ------VKFYGFCSH-----ARHSILIYEYLKRGSLATNLSN--------D-----------------------AAAEEL 521 (667)
Q Consensus 484 ------v~~~g~~~~-----~~~~~lv~ey~~~g~L~~~l~~--------~-----------------------~~~~~~ 521 (667)
..+..++.. ....+++|++ .+|+|.+.+.. . ....|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 111111111 2234566665 45788876630 0 011245
Q ss_pred ccccCCeeecCCCceEEecccccccccCCCCCcccccccccccCCCCC----------------CCchHHHHHHHHHHHH
Q 042735 522 DISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDYR----------------KKCDVYSFRVLALEVI 585 (667)
Q Consensus 522 dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~~----------------~~~DV~sfGvvl~Ell 585 (667)
||||+|||++.++.+||+|||+++..... ....+| +.|+|||.. .++|||||||++|||+
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999865432 345678 999999932 3899999999999999
Q ss_pred hCCCCCCCCccCCCChhhhhhhhccccCCCCCCCCCchHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHHHhh
Q 042735 586 KGKHPRGFVSSILPSPSVINMRLDEMLDPRLPPPSPDVQGKLISIMEVAFSCLDVSPESRPTMQTITQQLLFSL 659 (667)
Q Consensus 586 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cl~~~p~~RPt~~ev~~~l~~~~ 659 (667)
||+.||......... ...+... + ..+ ..+.+++.+||+.||++|||+.|++++.||..
T Consensus 312 tg~~Pf~~~~~~~~~--------~~~~~~~-~-~~~------~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 312 CADLPNTDDAALGGS--------EWIFRSC-K-NIP------QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HSSCCCCTTGGGSCS--------GGGGSSC-C-CCC------HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HCCCCCCCcchhhhH--------HHHHhhc-c-cCC------HHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 999998643221111 1111110 1 111 24667888999999999999999998877754
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=5.5e-28 Score=249.64 Aligned_cols=242 Identities=19% Similarity=0.175 Sum_probs=211.2
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEc
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLAL 81 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L 81 (667)
+++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+ +..+++|++|+|++|++++..+. ..|+.|++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~----~~L~~L~l 106 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHA 106 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC----TTCCEEEC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC----CCcCEEEC
Confidence 4589999999999999888899999999999999999987654 99999999999999999864322 57999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhh-hcCCCCCEEECcCCccCC
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAF-GIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~-~~l~~L~~L~L~~n~l~~ 160 (667)
++|.+++..+.. +.+|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..+ ..+++|++|++++|.+.+
T Consensus 107 ~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 999998765543 5789999999999999888889999999999999999998877776 478999999999999976
Q ss_pred ccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccccc-ccCccccc
Q 042735 161 EIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLI-GHLPSEIG 239 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~ 239 (667)
. + ....+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+.+ +|..+..+++|+.|++++|.+. +.+|..++
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 5 3 33458999999999999986 45569999999999999999985 6778999999999999999998 77888899
Q ss_pred CCCCCCeeeccCC-cCCc
Q 042735 240 SLTKLEFLNLSTN-RFSS 256 (667)
Q Consensus 240 ~l~~L~~L~Ls~N-~l~~ 256 (667)
.+++|+.|++++| .+++
T Consensus 260 ~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp TCHHHHHHHHHHHHHHHS
T ss_pred ccccceEEECCCchhccC
Confidence 9999999998843 3444
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.1e-25 Score=251.09 Aligned_cols=267 Identities=25% Similarity=0.270 Sum_probs=222.9
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALEN 83 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~ 83 (667)
+++.|++++|.++. +|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. ...+|+.|+|++
T Consensus 41 ~l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~--~l~~L~~L~Ls~ 110 (622)
T 3g06_A 41 GNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV--LPPGLLELSIFS 110 (622)
T ss_dssp CCCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC--CCTTCCEEEECS
T ss_pred CCcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC--CCCCCCEEECcC
Confidence 58999999999985 566554 89999999999998 4665 5899999999999998 4666 346799999999
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.+++. |. ...+|+.|++++|++++ +|.. +++|++|+|++|++++. |. .+.+|+.|++++|.+.+ +|
T Consensus 111 N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc
Confidence 999864 33 56899999999999986 4543 58999999999999864 32 45789999999999976 55
Q ss_pred ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCC
Q 042735 164 SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTK 243 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 243 (667)
..+++|+.|++++|.+++ +|. .+++|+.|++++|.+.. +|. .+++|+.|++++|.+++ +| ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCc
Confidence 457899999999999986 443 24789999999999874 454 35889999999999986 55 46789
Q ss_pred CCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCC
Q 042735 244 LEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSM 313 (667)
Q Consensus 244 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~ 313 (667)
|+.|+|++|.+++. |. .+++|+.|++++|++. .+|..+..+++|+.|++++|++.+.+|..+..+
T Consensus 243 L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 243 LKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 99999999999864 54 5789999999999976 789999999999999999999998888766544
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.7e-27 Score=260.20 Aligned_cols=234 Identities=20% Similarity=0.195 Sum_probs=192.1
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEe
Q 042735 27 KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIV 105 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l 105 (667)
++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| +.. .+|+.|+|++|.+++..+ .++|+.|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 378888888888887777778888888888888888776555 444 458888888887765432 367888888
Q ss_pred eCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCC-CCCCCCEEEccCCcCCC
Q 042735 106 GGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWG-KCPKLSTLNVSMNNITR 184 (667)
Q Consensus 106 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~ 184 (667)
++|.+++..+. .+++|+.|+|++|.+++..+..++.+++|++|+|++|.+.+..|..+. .+++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 88888776543 468899999999999988888899999999999999999888888776 78999999999999987
Q ss_pred CcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCC-ccchhhhh
Q 042735 185 SIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFS-SLIPESLG 263 (667)
Q Consensus 185 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 263 (667)
..+ +..+++|+.|+|++|.+.+. |+.|..+++|+.|+|++|.+++ +|..++.+++|+.|++++|.+. +.+|.++.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 633 44689999999999999875 4458899999999999999985 6778899999999999999998 66788888
Q ss_pred cccCCCeecCC
Q 042735 264 NLLKLHYLDLS 274 (667)
Q Consensus 264 ~l~~L~~L~ls 274 (667)
.++.|+.++++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 88888888875
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.2e-27 Score=257.16 Aligned_cols=236 Identities=19% Similarity=0.167 Sum_probs=190.6
Q ss_pred CCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEE
Q 042735 49 NLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRI 127 (667)
Q Consensus 49 ~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 127 (667)
.+++|++|+|++|.+++..|..+.. .+|++|+|++|.+++..+ +..+++|+.|++++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 3447999999999888776777766 469999999998887665 7888889999999998876432 3788999
Q ss_pred EccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCcccc-CCCCcCeeeccCCcc
Q 042735 128 SLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIG-NLSTLNEFDLSLNHI 206 (667)
Q Consensus 128 ~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l 206 (667)
+|++|.+++..+. .+++|+.|+|++|.+.+..|..+..+++|+.|+|++|.+++..|..+. ++++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999988876654 457889999999998888888888888999999999998887777775 788899999999988
Q ss_pred cccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCc-cccchh
Q 042735 207 VGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI-QELPKE 285 (667)
Q Consensus 207 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~-~~~p~~ 285 (667)
.+.. .+..+++|+.|+|++|.+++.+| .++.+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.+
T Consensus 182 ~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred cccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 7663 24468889999999998886444 58888899999999999886 5777888888999999988877 677788
Q ss_pred hhcCCCCCEEECc
Q 042735 286 LGKLVQLSELELS 298 (667)
Q Consensus 286 l~~l~~L~~L~l~ 298 (667)
+..++.|+.++++
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 8888888877775
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=6.8e-24 Score=236.62 Aligned_cols=248 Identities=26% Similarity=0.303 Sum_probs=208.4
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
++|+.|+|++|.|+.+ |. .+++|++|+|++|+|+. +|. .+++|++|+|++|++++ +|. ...+|+.|+|+
T Consensus 61 ~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~--~l~~L~~L~L~ 129 (622)
T 3g06_A 61 AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA--LPSGLCKLWIF 129 (622)
T ss_dssp TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC--CCTTCCEEECC
T ss_pred CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC--CCCCcCEEECC
Confidence 5799999999999965 44 57999999999999984 665 68999999999999985 555 33569999999
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCcc
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEI 162 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 162 (667)
+|.+++ +|.. .++|+.|++++|++++. |. .+++|+.|++++|.+++. | ..+++|+.|++++|.+.+ +
T Consensus 130 ~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~-l 196 (622)
T 3g06_A 130 GNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLAS-L 196 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-C
T ss_pred CCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCC-C
Confidence 999986 4443 48999999999999863 43 357899999999999864 4 567899999999999975 4
Q ss_pred CccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCC
Q 042735 163 ASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLT 242 (667)
Q Consensus 163 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 242 (667)
|. .+++|+.|++++|.++. +|. .+++|+.|+|++|.+.+ +| ..+++|+.|+|++|.++ .+|. .++
T Consensus 197 ~~---~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~ 261 (622)
T 3g06_A 197 PT---LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPS 261 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCT
T ss_pred CC---ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccc
Confidence 44 35789999999999985 443 34789999999999986 55 45689999999999998 4555 678
Q ss_pred CCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCC
Q 042735 243 KLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLV 290 (667)
Q Consensus 243 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~ 290 (667)
+|+.|+|++|+++ .+|..+.++++|+.|++++|++.+..|..+..+.
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999999999999 5688999999999999999999999998877664
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.9e-24 Score=216.22 Aligned_cols=206 Identities=20% Similarity=0.236 Sum_probs=143.3
Q ss_pred CccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEcc
Q 042735 99 ALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVS 178 (667)
Q Consensus 99 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 178 (667)
+++.|++++|++++..+..+.++++|++|+|++|.+++..+..|..+++|++|++++|.+.+..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34455555555554444556667777777777777766666667777777777777777766666677777777777777
Q ss_pred CCcCCCCcCccccCCCCcCeeeccCCccccc-CCccccCCcccceeecccccccccCcccccCCCCCC----eeeccCCc
Q 042735 179 MNNITRSIPLEIGNLSTLNEFDLSLNHIVGK-IPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLE----FLNLSTNR 253 (667)
Q Consensus 179 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~Ls~N~ 253 (667)
+|.+.+..+..+.++++|++|++++|.+.+. +|..|..+++|+.|++++|++.+..+..+..+++|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7777766665677777777777777777653 467777777777777777777766666666666665 77888888
Q ss_pred CCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCc
Q 042735 254 FSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 254 l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
+++..+..+. ..+|+.|++++|++.+..+..+..+++|+.|++++|++...
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 8765554443 34788888888887665555667788888888888887654
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=6.4e-24 Score=214.62 Aligned_cols=223 Identities=18% Similarity=0.153 Sum_probs=187.8
Q ss_pred EEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccccc
Q 042735 7 ELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNH 85 (667)
Q Consensus 7 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~ 85 (667)
..+..+..++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.. .+|+.|+|++|.
T Consensus 11 ~~~c~~~~l~~-ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCSS-CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCccc-cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 45666666764 455443 57999999999999877778999999999999999998777767766 569999999999
Q ss_pred ccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccc-cchhhhcCCCCCEEECcCCccCCccCc
Q 042735 86 FTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGT-ISEAFGIYLNLTFLDISDNNFFGEIAS 164 (667)
Q Consensus 86 l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~ 164 (667)
+++..+..+.++.+|+.|++++|++.+..+..+.++++|++|+|++|.+++. +|..++.+++|++|++++|.+.+..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9888888899999999999999999887777899999999999999999874 588999999999999999999887777
Q ss_pred cCCCCCCCC----EEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccccccc
Q 042735 165 NWGKCPKLS----TLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGH 233 (667)
Q Consensus 165 ~~~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 233 (667)
.+..+.+|+ .|++++|.+.+..+..+ ...+|+.|+|++|.+.+..+..|..+++|+.|++++|.+...
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred HhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 777777776 89999999986555544 445899999999999877777789999999999999998753
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.8e-23 Score=209.14 Aligned_cols=201 Identities=24% Similarity=0.263 Sum_probs=138.3
Q ss_pred ccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccC
Q 042735 100 LERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSM 179 (667)
Q Consensus 100 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 179 (667)
.+.+++++++++. +|..+. ++|+.|+|++|++++..+..|..+++|++|++++|.+....+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 3445555555542 343332 4567777777777666656677777777777777776655555566777777777777
Q ss_pred CcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccch
Q 042735 180 NNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIP 259 (667)
Q Consensus 180 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 259 (667)
|.+.+..+..+.++++|++|+|++|.+.+..+..|..+++|+.|+|++|.+.+..+..|+.+++|+.|+|++|.+++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 77776655666777777777777777776666667777777777777777776555567777777777777777777666
Q ss_pred hhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 260 ESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 260 ~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
..|.++++|+.|++++|++.+..+..+..+++|+.|++++|++.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 66777777777777777766555556777778888888888764
No 322
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.1e-24 Score=213.73 Aligned_cols=208 Identities=21% Similarity=0.227 Sum_probs=151.6
Q ss_pred CCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEE
Q 042735 97 NGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLN 176 (667)
Q Consensus 97 ~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 176 (667)
+.+|+.|++.+|.+... ..+..+++|+.|+|++|.+++. ..+..+++|++|++++|.+.+..+..|..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 34455555555554421 2466677777777777777653 3677777788888888877766666677778888888
Q ss_pred ccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCc
Q 042735 177 VSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 177 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 256 (667)
+++|.+++..+..+.++++|++|++++|.+.+..+..|+.+++|+.|++++|.+++..+..++.+++|+.|++++|.+++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 88888777666667778888888888887776666667778888888888888876666667778888888888888887
Q ss_pred cchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCCCcCcccccCCcc
Q 042735 257 LIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLGREIPSQICSMEC 315 (667)
Q Consensus 257 ~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~~~ 315 (667)
..|..+..+++|+.|++++|.+.+ .+++|+.|+++.|.+.+.+|..++.+..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 777777778888888888887653 3456777788888888888877766543
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=7.3e-24 Score=213.64 Aligned_cols=210 Identities=21% Similarity=0.289 Sum_probs=150.7
Q ss_pred cCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEE
Q 042735 24 WNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERV 103 (667)
Q Consensus 24 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 103 (667)
..+++|+.|++++|.+.. + ..+..+++|++|+|++|.+++ + ..+..+++|+.|
T Consensus 38 ~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~------------------------~~l~~l~~L~~L 90 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I------------------------SALKELTNLTYL 90 (272)
T ss_dssp HHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C------------------------GGGTTCTTCCEE
T ss_pred ccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c------------------------hhhcCCCCCCEE
Confidence 345556666666665542 2 235555556666665555543 1 234455566666
Q ss_pred EeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC
Q 042735 104 IVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 104 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 183 (667)
++++|.+++..+..+.++++|++|+|++|++++..+..|+.+++|++|++++|.+.+..+..+..+++|+.|++++|+++
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 66666666666666777888888888888887777777788888888888888887766667788888888888888888
Q ss_pred CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhh
Q 042735 184 RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLG 263 (667)
Q Consensus 184 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 263 (667)
+..+..+.++++|++|++++|.+.+..+..|..+++|+.|++++|.+.+ .+++|+.|++..|.++|.+|.+++
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTS
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCccc
Confidence 7776667888888888888888887777778888888888888887764 355788888888888888888877
Q ss_pred cccC
Q 042735 264 NLLK 267 (667)
Q Consensus 264 ~l~~ 267 (667)
.+..
T Consensus 244 ~~~~ 247 (272)
T 3rfs_A 244 SVAP 247 (272)
T ss_dssp CBCG
T ss_pred ccCC
Confidence 6543
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=7.7e-23 Score=205.94 Aligned_cols=156 Identities=22% Similarity=0.264 Sum_probs=71.7
Q ss_pred CccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEcc
Q 042735 99 ALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVS 178 (667)
Q Consensus 99 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 178 (667)
+|+.|++++|.++...+..+.++++|++|+|++|.+++..+..|..+++|++|++++|.+.+..+..|..+++|++|+|+
T Consensus 62 ~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 141 (270)
T 2o6q_A 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECC
Confidence 33333333333333323333445555555555555544444444444555555555555444444444444555555555
Q ss_pred CCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcC
Q 042735 179 MNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRF 254 (667)
Q Consensus 179 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 254 (667)
+|.+++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+..+..+..+++|+.|+|++|.+
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 5544443333344444445555544444443333444444444444444444433333344444444444444444
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.1e-22 Score=206.89 Aligned_cols=202 Identities=24% Similarity=0.254 Sum_probs=159.3
Q ss_pred cCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCE
Q 042735 95 CRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLST 174 (667)
Q Consensus 95 ~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 174 (667)
..+.+++.+++.++.++. +|..+. ++++.|+|++|.+++..+..|..+++|++|+|++|.+.+..+. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 345566666666666653 444443 5788888888888877777888888888888888887654332 67888888
Q ss_pred EEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcC
Q 042735 175 LNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRF 254 (667)
Q Consensus 175 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 254 (667)
|+|++|.+. .+|..+.++++|++|+|++|++.+..+..|.++++|+.|+|++|++.+..+..|..+++|+.|+|++|++
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 888888887 5677788888888888888888877777888888888888888888877777788888899999999988
Q ss_pred CccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 255 SSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 255 ~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
++..+..+..+++|+.|++++|++. .+|..+..+.+|+.|++++|++.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 8776677788888999999888865 67888888888999999998874
No 326
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.7e-25 Score=232.91 Aligned_cols=253 Identities=15% Similarity=0.137 Sum_probs=162.8
Q ss_pred EEeccCCcCcCCCCccccCCCCCCEEEccCccccccCC----ccccCCC-CCCeeeccccccceeCCCCCcc------cc
Q 042735 7 ELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLP----SSVGNLS-SLRYLFLFENNLSGSIPPSVGN------LM 75 (667)
Q Consensus 7 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~------~~ 75 (667)
.++|++|.+++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+.. .+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999888877777789999999999997666 7788898 8999999999998766655544 46
Q ss_pred cCEEEcccccccccCCccccC----C-CCccEEEeeCcccccccCcc----CCC-CCCCcEEEccCCcccccc----chh
Q 042735 76 LTVLALENNHFTGNLRHNICR----N-GALERVIVGGNHFRGPIPKC----LRN-CPNLVRISLEGNNMRGTI----SEA 141 (667)
Q Consensus 76 L~~L~L~~n~l~~~~~~~~~~----~-~~L~~L~l~~n~~~~~~p~~----l~~-l~~L~~L~L~~n~~~~~~----~~~ 141 (667)
|+.|+|++|.+++..+..+.. . .+|+.|++++|.+++..+.. +.. .++|++|+|++|.++... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 888888888887665554333 2 67777777777776554433 223 247777777777776432 233
Q ss_pred hhcCC-CCCEEECcCCccCCccCccC----CCC-CCCCEEEccCCcCCCC----cCccccC-CCCcCeeeccCCcccccC
Q 042735 142 FGIYL-NLTFLDISDNNFFGEIASNW----GKC-PKLSTLNVSMNNITRS----IPLEIGN-LSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 142 ~~~l~-~L~~L~L~~n~l~~~~~~~~----~~l-~~L~~L~L~~n~l~~~----~p~~~~~-l~~L~~L~L~~n~l~~~~ 210 (667)
+..++ +|++|+|++|.+.+..+..+ ..+ ++|+.|+|++|.+... ++..+.. .++|++|+|++|.+.+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 67777777776655444322 233 4677777777766542 2333433 236666666666665433
Q ss_pred C----ccccCCcccceeecccccccccC-------cccccCCCCCCeeeccCCcCCccch
Q 042735 211 P----KEFGKLNSLTKLILRGNQLIGHL-------PSEIGSLTKLEFLNLSTNRFSSLIP 259 (667)
Q Consensus 211 p----~~~~~l~~L~~L~L~~n~l~~~~-------p~~~~~l~~L~~L~Ls~N~l~~~~p 259 (667)
+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|.+....+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2 22355566666666666633222 2234455666666666666654433
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.4e-22 Score=205.99 Aligned_cols=202 Identities=18% Similarity=0.160 Sum_probs=103.5
Q ss_pred cCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEE
Q 042735 24 WNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERV 103 (667)
Q Consensus 24 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 103 (667)
.++++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..| ..+..+++|+.|
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~-----------------------~~~~~l~~L~~L 60 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSL-----------------------ATLMPYTRLTQL 60 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEG-----------------------GGGTTCTTCCEE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCH-----------------------HHhhcCCCCCEE
Confidence 34555555555555554 2343332 345555555554443333 333333344444
Q ss_pred EeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCC
Q 042735 104 IVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNIT 183 (667)
Q Consensus 104 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 183 (667)
++++|.+++..+ ...+++|+.|+|++|+++ .+|..+..+++|++|++++|++.+..+..|..+++|+.|+|++|+++
T Consensus 61 ~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 61 NLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp ECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 444444333222 145556666666666655 33444555555555555555555544455555555555555555555
Q ss_pred CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCC
Q 042735 184 RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFS 255 (667)
Q Consensus 184 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 255 (667)
+..+..|..+++|+.|+|++|++.+..+..|..+++|+.|+|++|++. .+|..+..+++|+.|+|++|.+.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 544444555555555555555555444444555555555555555554 34444555555555555555553
No 328
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.1e-24 Score=231.43 Aligned_cols=188 Identities=19% Similarity=0.221 Sum_probs=130.3
Q ss_pred CCCCCCcEEEccCCcccc----ccchhhhcCCCCCEEECcCCccCCccCcc----CCCC---------CCCCEEEccCCc
Q 042735 119 RNCPNLVRISLEGNNMRG----TISEAFGIYLNLTFLDISDNNFFGEIASN----WGKC---------PKLSTLNVSMNN 181 (667)
Q Consensus 119 ~~l~~L~~L~L~~n~~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~l---------~~L~~L~L~~n~ 181 (667)
..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+....+.. +..+ ++|++|+|++|.
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 455556666666665554 34455555666666666666554222222 2222 677777777777
Q ss_pred CC-CCcC---ccccCCCCcCeeeccCCcccc-----cCCccccCCcccceeeccccccc----ccCcccccCCCCCCeee
Q 042735 182 IT-RSIP---LEIGNLSTLNEFDLSLNHIVG-----KIPKEFGKLNSLTKLILRGNQLI----GHLPSEIGSLTKLEFLN 248 (667)
Q Consensus 182 l~-~~~p---~~~~~l~~L~~L~L~~n~l~~-----~~p~~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~ 248 (667)
++ +.++ ..+..+++|++|+|++|.+.. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 75 3333 356667788888888887752 33446778888888888888885 56777888889999999
Q ss_pred ccCCcCCcc----chhhhhc--ccCCCeecCCCccCcc----ccchhh-hcCCCCCEEECcCCCCCCcC
Q 042735 249 LSTNRFSSL----IPESLGN--LLKLHYLDLSKYQFIQ----ELPKEL-GKLVQLSELELSHNFLGREI 306 (667)
Q Consensus 249 Ls~N~l~~~----~p~~~~~--l~~L~~L~ls~n~~~~----~~p~~l-~~l~~L~~L~l~~n~l~~~i 306 (667)
|++|.+++. ++..+.. +++|+.|++++|.+.. .+|..+ .++++|++|++++|.+++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 999998765 4566633 8889999999998877 488777 66899999999999887644
No 329
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.2e-24 Score=223.32 Aligned_cols=253 Identities=20% Similarity=0.261 Sum_probs=128.3
Q ss_pred CCEEEccCccccccCCccccCC--CCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEee
Q 042735 29 LVKLGLGGNQFRGSLPSSVGNL--SSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVG 106 (667)
Q Consensus 29 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 106 (667)
++.|++++|.+. |..+..+ ++|+.|++++|.+.+..+..+...+|+.|+|++|.+++.
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~----------------- 108 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVS----------------- 108 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHH-----------------
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHH-----------------
Confidence 566666666554 3445555 566666666666655544443334455555555554432
Q ss_pred CcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCC-ccCCc-cCccCCCCCCCCEEEccCC-cCC
Q 042735 107 GNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDN-NFFGE-IASNWGKCPKLSTLNVSMN-NIT 183 (667)
Q Consensus 107 ~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~ 183 (667)
.+|..+..+++|++|+|++|.+++..+..++.+++|++|++++| .+.+. ++..+..+++|+.|++++| .++
T Consensus 109 ------~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 109 ------TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp ------HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred ------HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 03334444555555555555554444444555555555555555 33321 3333444555555555555 444
Q ss_pred CC-cCccccCCC-CcCeeeccCC--ccc-ccCCccccCCcccceeeccccc-ccccCcccccCCCCCCeeeccCCc-CCc
Q 042735 184 RS-IPLEIGNLS-TLNEFDLSLN--HIV-GKIPKEFGKLNSLTKLILRGNQ-LIGHLPSEIGSLTKLEFLNLSTNR-FSS 256 (667)
Q Consensus 184 ~~-~p~~~~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~ 256 (667)
+. ++..+.+++ +|++|++++| .+. +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +..
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~ 262 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP 262 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH
Confidence 32 334445555 5555555555 222 2334444555666666666665 444445555666666666666663 211
Q ss_pred cchhhhhcccCCCeecCCCccCccccchhhhcC-CCCCEEECcCCCCCCcCccccc
Q 042735 257 LIPESLGNLLKLHYLDLSKYQFIQELPKELGKL-VQLSELELSHNFLGREIPSQIC 311 (667)
Q Consensus 257 ~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l-~~L~~L~l~~n~l~~~ip~~~~ 311 (667)
.....+.++++|+.|++++| +... .+..+ ..|..|++++|.+++..|..++
T Consensus 263 ~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 263 ETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 11123555666666666655 2211 12222 1244555677777666665544
No 330
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.89 E-value=5.2e-25 Score=244.01 Aligned_cols=162 Identities=19% Similarity=0.109 Sum_probs=110.0
Q ss_pred eecccCeEEEEEE-eCCCceEEEEecCCCCC----C--chHHhHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCCceEEEE
Q 042735 429 IGSGRHGSVYRAE-LPSKEFLAVKKFNSPLP----S--DQIADQKEFFAEIEALTKI-RHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 429 lg~g~~g~vy~~~-~~~~~~~avk~~~~~~~----~--~~~~~~~~~~~E~~~l~~l-~H~niv~~~g~~~~~~~~~lv~ 500 (667)
.+.|+.|.++.++ +-.|+.+|||.+..... . ......++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666653 44578899998864321 1 1123346799999999999 5999999999999999999999
Q ss_pred EecCCCChHHHhccccC---------------------CcccccccCCeeecCCCceEEecccccccccCCCCCcccccc
Q 042735 501 EYLKRGSLATNLSNDAA---------------------AEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVG 559 (667)
Q Consensus 501 ey~~~g~L~~~l~~~~~---------------------~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~G 559 (667)
||++||+|.+.+..... ..|+||||+|||++.+|.+||+|||+|+.........++.+|
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vG 401 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQ 401 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHH
T ss_pred ecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCcee
Confidence 99999999998875432 224599999999999999999999999987665555667899
Q ss_pred cccccCCC-----CCCCchHHHHHHHHHHHHhCCCC
Q 042735 560 TYRYVAPD-----YRKKCDVYSFRVLALEVIKGKHP 590 (667)
Q Consensus 560 t~~y~aPE-----~~~~~DV~sfGvvl~ElltG~~p 590 (667)
|++||||| +..++|+||.|++++++.+|..+
T Consensus 402 Tp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 402 SFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHC-----------------CCCCTTHHH
T ss_pred chhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence 99999999 45679999999999888766443
No 331
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2e-24 Score=229.54 Aligned_cols=249 Identities=16% Similarity=0.176 Sum_probs=170.5
Q ss_pred CCccccCCCCCCEEEccCccccccCC----ccccCCCCCCeeecccccc---ceeCCCCCcccccCEEEcccccccccCC
Q 042735 19 IPTETWNLKSLVKLGLGGNQFRGSLP----SSVGNLSSLRYLFLFENNL---SGSIPPSVGNLMLTVLALENNHFTGNLR 91 (667)
Q Consensus 19 ~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l---~~~~p~~~~~~~L~~L~L~~n~l~~~~~ 91 (667)
++..+..+++|++|+|++|+++...+ ..+..+++|++|+|++|.+ ++.+|..+. .+.
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~----------------~l~ 87 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR----------------LLL 87 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH----------------HHH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHH----------------HHH
Confidence 45556667778888888887775533 3356777788887777533 333333221 001
Q ss_pred ccccCCCCccEEEeeCccccc----ccCccCCCCCCCcEEEccCCccccccchhhh----cC---------CCCCEEECc
Q 042735 92 HNICRNGALERVIVGGNHFRG----PIPKCLRNCPNLVRISLEGNNMRGTISEAFG----IY---------LNLTFLDIS 154 (667)
Q Consensus 92 ~~~~~~~~L~~L~l~~n~~~~----~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~----~l---------~~L~~L~L~ 154 (667)
..+..+++|+.|++++|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+++
T Consensus 88 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~ 167 (386)
T 2ca6_A 88 QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 167 (386)
T ss_dssp HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC
T ss_pred HHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECC
Confidence 122455666666666666665 3566677778888888888887644333333 33 788888888
Q ss_pred CCccC-CccC---ccCCCCCCCCEEEccCCcCCC-----CcCccccCCCCcCeeeccCCccc----ccCCccccCCcccc
Q 042735 155 DNNFF-GEIA---SNWGKCPKLSTLNVSMNNITR-----SIPLEIGNLSTLNEFDLSLNHIV----GKIPKEFGKLNSLT 221 (667)
Q Consensus 155 ~n~l~-~~~~---~~~~~l~~L~~L~L~~n~l~~-----~~p~~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~ 221 (667)
+|.+. +.++ ..+..+++|+.|+|++|.++. ..|..+.++++|+.|+|++|.+. +.+|..+..+++|+
T Consensus 168 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred CCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 88876 3333 356677788888888888762 23436778888888888888875 55677788888888
Q ss_pred eeeccccccccc----Ccccc--cCCCCCCeeeccCCcCCc----cchhhh-hcccCCCeecCCCccCccccc
Q 042735 222 KLILRGNQLIGH----LPSEI--GSLTKLEFLNLSTNRFSS----LIPESL-GNLLKLHYLDLSKYQFIQELP 283 (667)
Q Consensus 222 ~L~L~~n~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ls~n~~~~~~p 283 (667)
.|+|++|.+.+. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++.+..+
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 888888888754 45566 348889999999999887 467776 567899999999998876664
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=4.6e-24 Score=222.19 Aligned_cols=253 Identities=20% Similarity=0.208 Sum_probs=161.0
Q ss_pred CCcEEeccCCcCcCCCCccccCC--CCCCEEEccCccccccCCccccCCCCCCeeecccccccee-CCCCCcc-cccCEE
Q 042735 4 NLRELHLRDNYLTGLIPTETWNL--KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGS-IPPSVGN-LMLTVL 79 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~-~~L~~L 79 (667)
.++.+++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.. .+|+.|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999999886 4566677 8999999999999976655 66799999999999998754 5555444 457777
Q ss_pred EcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCC-ccccc-cchhhhcCCCCCEEECcCC-
Q 042735 80 ALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGN-NMRGT-ISEAFGIYLNLTFLDISDN- 156 (667)
Q Consensus 80 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n-~~~~~-~~~~~~~l~~L~~L~L~~n- 156 (667)
+|++|.+++..+. .+..+++|++|+|++| .+++. ++..+..+++|++|++++|
T Consensus 124 ~L~~~~l~~~~~~------------------------~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 124 SLEGLRLSDPIVN------------------------TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp ECTTCBCCHHHHH------------------------HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred eCcCcccCHHHHH------------------------HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 7777666544444 4444555555555555 34432 3444555556666666665
Q ss_pred ccCCc-cCccCCCCC-CCCEEEccCC--cCC-CCcCccccCCCCcCeeeccCCc-ccccCCccccCCcccceeeccccc-
Q 042735 157 NFFGE-IASNWGKCP-KLSTLNVSMN--NIT-RSIPLEIGNLSTLNEFDLSLNH-IVGKIPKEFGKLNSLTKLILRGNQ- 229 (667)
Q Consensus 157 ~l~~~-~~~~~~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~n~- 229 (667)
.+.+. ++..+..++ +|++|++++| .++ +.+|..+.++++|+.|++++|. +++..+..+..+++|+.|++++|.
T Consensus 180 ~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~ 259 (336)
T 2ast_B 180 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYD 259 (336)
T ss_dssp TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTT
T ss_pred CcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCC
Confidence 55432 344455555 6666666666 333 2344555666677777777766 555555566677777777777774
Q ss_pred ccccCcccccCCCCCCeeeccCCcCCccchhhhhcc-cCCCeecCCCccCccccchhhhc
Q 042735 230 LIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNL-LKLHYLDLSKYQFIQELPKELGK 288 (667)
Q Consensus 230 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~n~~~~~~p~~l~~ 288 (667)
+.......++.+++|+.|++++| ++. ..+..+ ..|..|++++|++.+..|..++.
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 21111124667778888888777 332 233333 23666777778877777766554
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=7.3e-23 Score=210.51 Aligned_cols=225 Identities=18% Similarity=0.154 Sum_probs=171.1
Q ss_pred cccCEEEcccccccccCCc---cccCCCCccEEEeeCcccccccCccC--CCCCCCcEEEccCCccccccc----hhhhc
Q 042735 74 LMLTVLALENNHFTGNLRH---NICRNGALERVIVGGNHFRGPIPKCL--RNCPNLVRISLEGNNMRGTIS----EAFGI 144 (667)
Q Consensus 74 ~~L~~L~L~~n~l~~~~~~---~~~~~~~L~~L~l~~n~~~~~~p~~l--~~l~~L~~L~L~~n~~~~~~~----~~~~~ 144 (667)
..++.+.+.++.++...-. .+....+|+.|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3466666666665422111 12223568888888888888888877 888899999999998886544 44567
Q ss_pred CCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCC--c--CccccCCCCcCeeeccCCcccccCCc----cccC
Q 042735 145 YLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRS--I--PLEIGNLSTLNEFDLSLNHIVGKIPK----EFGK 216 (667)
Q Consensus 145 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~ 216 (667)
+++|++|+|++|.+.+..+..|..+++|++|+|++|++.+. + +..+.++++|++|+|++|.+.. ++. .++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 88999999999999888888888999999999999987652 2 2234678899999999998863 222 2567
Q ss_pred CcccceeecccccccccCcccccCC---CCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCC
Q 042735 217 LNSLTKLILRGNQLIGHLPSEIGSL---TKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLS 293 (667)
Q Consensus 217 l~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~ 293 (667)
+++|+.|+|++|++.+..|..+..+ ++|++|+|++|+++. +|..+. ++|+.|++++|++.+. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8899999999999988778777776 699999999999984 566664 7899999999987653 44 57789999
Q ss_pred EEECcCCCCCC
Q 042735 294 ELELSHNFLGR 304 (667)
Q Consensus 294 ~L~l~~n~l~~ 304 (667)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999998854
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=9.4e-23 Score=209.68 Aligned_cols=223 Identities=22% Similarity=0.209 Sum_probs=176.1
Q ss_pred CCCeeecccccccee----CCCCCcccccCEEEcccccccccCCccc--cCCCCccEEEeeCcccccccC----ccCCCC
Q 042735 52 SLRYLFLFENNLSGS----IPPSVGNLMLTVLALENNHFTGNLRHNI--CRNGALERVIVGGNHFRGPIP----KCLRNC 121 (667)
Q Consensus 52 ~L~~L~L~~n~l~~~----~p~~~~~~~L~~L~L~~n~l~~~~~~~~--~~~~~L~~L~l~~n~~~~~~p----~~l~~l 121 (667)
.++.|.+.++.+... ++..+...+|+.|+|++|.+.+..|..+ ..+.+|+.|++++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777665421 1122223458888888888888888777 778889999999998887555 345678
Q ss_pred CCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc--c--CccCCCCCCCCEEEccCCcCCCCcCc----cccCC
Q 042735 122 PNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE--I--ASNWGKCPKLSTLNVSMNNITRSIPL----EIGNL 193 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~l 193 (667)
++|++|+|++|.+++..+..|+.+++|++|+|++|++.+. + +..+..+++|++|+|++|.++. ++. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999888888999999999999999987653 2 2234688999999999999963 332 25788
Q ss_pred CCcCeeeccCCcccccCCccccCC---cccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCe
Q 042735 194 STLNEFDLSLNHIVGKIPKEFGKL---NSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHY 270 (667)
Q Consensus 194 ~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 270 (667)
++|++|+|++|.+.+..|..+..+ ++|+.|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998878777776 69999999999998 6677664 7999999999999975 33 677899999
Q ss_pred ecCCCccCcc
Q 042735 271 LDLSKYQFIQ 280 (667)
Q Consensus 271 L~ls~n~~~~ 280 (667)
|++++|++..
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999998754
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.3e-22 Score=196.09 Aligned_cols=157 Identities=24% Similarity=0.280 Sum_probs=80.9
Q ss_pred CCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeecc
Q 042735 123 NLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLS 202 (667)
Q Consensus 123 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 202 (667)
+|+.|+|++|.+++..+..|..+++|++|+|++|.+.+..+..|..+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555444455555555555555555554444445555555555555555554444444555555555555
Q ss_pred CCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCc
Q 042735 203 LNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI 279 (667)
Q Consensus 203 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~ 279 (667)
+|.+.+..+..|..+++|+.|+|++|.+.+..+..|+.+++|++|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 55555444444455555555555555555444444555555555555555555544444555555555555555443
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=7.4e-24 Score=222.94 Aligned_cols=255 Identities=17% Similarity=0.109 Sum_probs=132.3
Q ss_pred EEEccCccccccCCccccCCCCCCeeeccccccceeCC----CCCcc-c-ccCEEEcccccccccCCccccCC-----CC
Q 042735 31 KLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIP----PSVGN-L-MLTVLALENNHFTGNLRHNICRN-----GA 99 (667)
Q Consensus 31 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~-~-~L~~L~L~~n~l~~~~~~~~~~~-----~~ 99 (667)
.++|++|.+++.+|..+...++|++|+|++|.+++..+ ..+.. . +|+.|+|++|.+++..+..+... .+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788999998888877777779999999999876544 33333 2 57777777777765554444442 55
Q ss_pred ccEEEeeCcccccccCcc----CCCC-CCCcEEEccCCccccccchhhhc-----CCCCCEEECcCCccCCccCccCCCC
Q 042735 100 LERVIVGGNHFRGPIPKC----LRNC-PNLVRISLEGNNMRGTISEAFGI-----YLNLTFLDISDNNFFGEIASNWGKC 169 (667)
Q Consensus 100 L~~L~l~~n~~~~~~p~~----l~~l-~~L~~L~L~~n~~~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~~~l 169 (667)
|+.|++++|.+++..+.. +..+ ++|++|+|++|.+++..+..+.. .++|++|+|++|.+....+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 555555555555443332 2222 45555555555554443333221 13455555555444321111
Q ss_pred CCCCEEEccCCcCCCCcCccccCCC-CcCeeeccCCcccccCCccc----cCC-cccceeeccccccccc----Cccccc
Q 042735 170 PKLSTLNVSMNNITRSIPLEIGNLS-TLNEFDLSLNHIVGKIPKEF----GKL-NSLTKLILRGNQLIGH----LPSEIG 239 (667)
Q Consensus 170 ~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~----~~l-~~L~~L~L~~n~l~~~----~p~~~~ 239 (667)
.++..+..++ +|++|+|++|.+.+..+..+ ..+ ++|+.|+|++|.+.+. ++..+.
T Consensus 157 ---------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 157 ---------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp ---------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred ---------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 1112223333 45555555555544333222 222 3555555555555431 233333
Q ss_pred C-CCCCCeeeccCCcCCccchh----hhhcccCCCeecCCCccCcc-------ccchhhhcCCCCCEEECcCCCCCCc
Q 042735 240 S-LTKLEFLNLSTNRFSSLIPE----SLGNLLKLHYLDLSKYQFIQ-------ELPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 240 ~-l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~ls~n~~~~-------~~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
. .++|++|+|++|.+++..+. .+..+++|+.|++++|.+.. .++..+..+++|+.|++++|.+...
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3 23566666666655544332 22344556666666555221 2233445566677777777766544
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=8.9e-22 Score=194.34 Aligned_cols=205 Identities=20% Similarity=0.183 Sum_probs=165.7
Q ss_pred CcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccc-cceeCCCCCcc-cccCEEEccc-ccccccCC
Q 042735 15 LTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENN-LSGSIPPSVGN-LMLTVLALEN-NHFTGNLR 91 (667)
Q Consensus 15 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~-~~L~~L~L~~-n~l~~~~~ 91 (667)
++. +|. + .++|++|+|++|++++..+..|.++++|++|++++|+ +++..+..+.. .+|+.|+|++ |.+++..+
T Consensus 23 l~~-ip~-~--~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQR-IPS-L--PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CSS-CCC-C--CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred ccc-cCC-C--CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 554 455 3 3488899999999987777788889999999999996 77665556665 5699999998 88887777
Q ss_pred ccccCCCCccEEEeeCcccccccCccCCCCCCCc---EEEccCC-ccccccchhhhcCCCCC-EEECcCCccCCccCccC
Q 042735 92 HNICRNGALERVIVGGNHFRGPIPKCLRNCPNLV---RISLEGN-NMRGTISEAFGIYLNLT-FLDISDNNFFGEIASNW 166 (667)
Q Consensus 92 ~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~---~L~L~~n-~~~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~ 166 (667)
..+..+++|+.|++++|.+++ +|. +..+++|+ .|++++| .+++..+..|..+++|+ .|++++|.+....+..|
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~ 176 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF 176 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc
Confidence 788888999999999999887 565 88888888 9999999 99888888899999999 99999999874334445
Q ss_pred CCCCCCCEEEccCCc-CCCCcCccccCC-CCcCeeeccCCcccccCCccccCCcccceeeccccc
Q 042735 167 GKCPKLSTLNVSMNN-ITRSIPLEIGNL-STLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQ 229 (667)
Q Consensus 167 ~~l~~L~~L~L~~n~-l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 229 (667)
.. ++|+.|++++|+ +++..+..|.++ ++|+.|++++|.+.+. |.. .+++|+.|+++++.
T Consensus 177 ~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 177 NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 44 899999999995 887767788899 9999999999999854 433 67788899888764
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=6.1e-22 Score=195.54 Aligned_cols=177 Identities=20% Similarity=0.253 Sum_probs=76.3
Q ss_pred CCCCCCCcEEEccCCc-cccccchhhhcCCCCCEEECcC-CccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCC
Q 042735 118 LRNCPNLVRISLEGNN-MRGTISEAFGIYLNLTFLDISD-NNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLST 195 (667)
Q Consensus 118 l~~l~~L~~L~L~~n~-~~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 195 (667)
+.++++|+.|+|++|+ ++...+..|..+++|++|++++ |.+.+..+..|..+++|+.|++++|.+++ +|. +..+++
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~ 128 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYS 128 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCB
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccc
Confidence 3333444444444443 3333333344444444444443 44433333334444444444444444443 222 444444
Q ss_pred cC---eeeccCC-cccccCCccccCCcccc-eeecccccccccCcccccCCCCCCeeeccCCc-CCccchhhhhcc-cCC
Q 042735 196 LN---EFDLSLN-HIVGKIPKEFGKLNSLT-KLILRGNQLIGHLPSEIGSLTKLEFLNLSTNR-FSSLIPESLGNL-LKL 268 (667)
Q Consensus 196 L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L 268 (667)
|+ +|++++| .+.+..+..|.++++|+ .|++++|.+....+..+.. ++|+.|++++|+ +++..+..|.++ ++|
T Consensus 129 L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp CCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 44 4444444 44443334444455555 5555555444222222222 455555555552 444444444444 555
Q ss_pred CeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 269 HYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 269 ~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
+.|++++|++. .+|.. .+.+|+.|+++++
T Consensus 208 ~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 208 SLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp SEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred cEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 55555555443 23322 3445555555544
No 339
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.87 E-value=3.8e-24 Score=240.65 Aligned_cols=303 Identities=15% Similarity=0.074 Sum_probs=167.8
Q ss_pred CCCCcEEeccCCcCcCCC----CccccCCCCCCEEEccCcccc----ccCCccccCCCCCCeeeccccccceeCCCCCcc
Q 042735 2 LTNLRELHLRDNYLTGLI----PTETWNLKSLVKLGLGGNQFR----GSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN 73 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 73 (667)
+++|+.|+|++|.+++.. +..+.++++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 467777777777765542 223345677777777777765 2334445566777777777776653 3333332
Q ss_pred -cccCEEEcccccc--------------------------cccCCccccCCCCccEEEeeCcccccccC-ccCCCCCCCc
Q 042735 74 -LMLTVLALENNHF--------------------------TGNLRHNICRNGALERVIVGGNHFRGPIP-KCLRNCPNLV 125 (667)
Q Consensus 74 -~~L~~L~L~~n~l--------------------------~~~~~~~~~~~~~L~~L~l~~n~~~~~~p-~~l~~l~~L~ 125 (667)
.+|+.|+++++.. .+.++..+..+++|+.|++++|.+++... ..+..+++|+
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 2355555543211 12233334444556666666655443222 2245566666
Q ss_pred EEEccCCccccccchhhhcCCCCCEEECcC-----------CccCCc-cCccCCCCCCCCEEEccCCcCCCCcCccccC-
Q 042735 126 RISLEGNNMRGTISEAFGIYLNLTFLDISD-----------NNFFGE-IASNWGKCPKLSTLNVSMNNITRSIPLEIGN- 192 (667)
Q Consensus 126 ~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~-----------n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~- 192 (667)
.|+++++-..+.++..+..+++|++|++++ |.+.+. ++.....+++|+.|+++.|.+++..+..+..
T Consensus 322 ~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~ 401 (592)
T 3ogk_B 322 VLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTY 401 (592)
T ss_dssp EEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHH
T ss_pred EEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhh
Confidence 666652222222333335566666666662 333322 1112234667777777666666544444444
Q ss_pred CCCcCeeecc----CCccccc-----CCccccCCcccceeeccccc--ccccCccccc-CCCCCCeeeccCCcCCcc-ch
Q 042735 193 LSTLNEFDLS----LNHIVGK-----IPKEFGKLNSLTKLILRGNQ--LIGHLPSEIG-SLTKLEFLNLSTNRFSSL-IP 259 (667)
Q Consensus 193 l~~L~~L~L~----~n~l~~~-----~p~~~~~l~~L~~L~L~~n~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p 259 (667)
+++|+.|+++ .|.+++. ++..+.++++|+.|++++|. +++..+..++ .+++|++|+|++|.+++. ++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 6677777775 4455442 22224556777777776432 4433333333 367777888877777652 34
Q ss_pred hhhhcccCCCeecCCCccCccc-cchhhhcCCCCCEEECcCCCCCCc
Q 042735 260 ESLGNLLKLHYLDLSKYQFIQE-LPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 260 ~~~~~l~~L~~L~ls~n~~~~~-~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
..+.++++|+.|++++|.+... ++..+..+++|++|++++|.++..
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 4556677788888887776443 344445677788888887776543
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=3.9e-21 Score=191.21 Aligned_cols=180 Identities=23% Similarity=0.277 Sum_probs=162.9
Q ss_pred CCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeecc
Q 042735 123 NLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLS 202 (667)
Q Consensus 123 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 202 (667)
+.+.++++++.++. +|..+. ++++.|+|++|.+.+..+..|..+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 46778888888874 343332 689999999999999888899999999999999999999888889999999999999
Q ss_pred CCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcccc
Q 042735 203 LNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQEL 282 (667)
Q Consensus 203 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~ 282 (667)
+|.+.+..+..|..+++|+.|+|++|.+.+..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|++.+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 99999888888999999999999999999777777899999999999999999988888999999999999999998877
Q ss_pred chhhhcCCCCCEEECcCCCCCCc
Q 042735 283 PKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 283 p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
+..+..+++|+.|++++|++...
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 78899999999999999998654
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=5.9e-21 Score=195.89 Aligned_cols=205 Identities=20% Similarity=0.237 Sum_probs=156.7
Q ss_pred ccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccc
Q 042735 10 LRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTG 88 (667)
Q Consensus 10 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~ 88 (667)
+..+.+++.++ +.++++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +.. .+|+.|+|++|.+++
T Consensus 26 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~ 99 (308)
T 1h6u_A 26 AGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN 99 (308)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC
T ss_pred hCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC
Confidence 44444544322 3456777777777777763 34 56777777777777777764333 443 457777777777765
Q ss_pred cCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCC
Q 042735 89 NLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGK 168 (667)
Q Consensus 89 ~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 168 (667)
. ..+..+.+|+.|++++|.+++. + .+..+++|+.|+|++|.+++..+ +..+++|++|++++|.+.+..+ +..
T Consensus 100 ~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~ 171 (308)
T 1h6u_A 100 V--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LAN 171 (308)
T ss_dssp C--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred c--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcC
Confidence 3 3577778888888888888764 3 38899999999999999987654 8899999999999999876433 889
Q ss_pred CCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccc
Q 042735 169 CPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIG 232 (667)
Q Consensus 169 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 232 (667)
+++|+.|++++|.+++..+ +..+++|++|+|++|.+.+.. .+..+++|+.|++++|.+++
T Consensus 172 l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 172 LSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 9999999999999986544 888999999999999998654 38899999999999999874
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=9.4e-21 Score=198.18 Aligned_cols=238 Identities=16% Similarity=0.118 Sum_probs=144.3
Q ss_pred cEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCC-CCccc-cc-CEEEcc
Q 042735 6 RELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPP-SVGNL-ML-TVLALE 82 (667)
Q Consensus 6 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~~-~L-~~L~L~ 82 (667)
+.++.++++++. +|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|. .|..+ .+ +.+.+.
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 567888999986 56655 36899999999999976667899999999999999998766664 44443 33 345666
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccC-CccccccchhhhcCC-CCCEEECcCCccCC
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEG-NNMRGTISEAFGIYL-NLTFLDISDNNFFG 160 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~-n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~ 160 (667)
+|++....+..+..+++|+.|++++|++....+..+....++..|++.+ +++....+..|..+. .++.|++++|++..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 6777766666666666777777777766655555555555666666644 445444444454443 45666666666643
Q ss_pred ccCccCCCCCCCCEEEccC-CcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCccccc
Q 042735 161 EIASNWGKCPKLSTLNVSM-NNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIG 239 (667)
Q Consensus 161 ~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 239 (667)
++.......+|+.|++++ |.++...+..|.++++|++|+|++|+++...+..|.++++|+.+++. .+ ..+| .+.
T Consensus 169 -i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l-~~lP-~l~ 243 (350)
T 4ay9_X 169 -IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NL-KKLP-TLE 243 (350)
T ss_dssp -ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TC-CCCC-CTT
T ss_pred -CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--Cc-CcCC-Cch
Confidence 333223344566666653 34433333345666666666666666654433344444444333321 12 2344 255
Q ss_pred CCCCCCeeeccC
Q 042735 240 SLTKLEFLNLST 251 (667)
Q Consensus 240 ~l~~L~~L~Ls~ 251 (667)
++++|+.+++++
T Consensus 244 ~l~~L~~l~l~~ 255 (350)
T 4ay9_X 244 KLVALMEASLTY 255 (350)
T ss_dssp TCCSCCEEECSC
T ss_pred hCcChhhCcCCC
Confidence 566666666554
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=1.8e-20 Score=192.34 Aligned_cols=172 Identities=24% Similarity=0.325 Sum_probs=93.2
Q ss_pred CCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcC
Q 042735 118 LRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLN 197 (667)
Q Consensus 118 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 197 (667)
+..+++|+.|+|++|.+++..+ +..+++|++|++++|.+.+. +.+..+++|+.|++++|.+++. + .+.++++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCC
Confidence 4445555555555555554333 55555555555555555432 2455555555555555555542 2 255555666
Q ss_pred eeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCcc
Q 042735 198 EFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQ 277 (667)
Q Consensus 198 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~ 277 (667)
+|++++|.+.+..+ ++.+++|+.|++++|.+.+. +. +..+++|+.|++++|.+++..+ +..+++|+.|++++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 66666665554322 55556666666666655532 22 5556666666666666655432 5555666666666665
Q ss_pred CccccchhhhcCCCCCEEECcCCCCC
Q 042735 278 FIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 278 ~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
+.+..+ +..+++|+.|++++|.+.
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cCcccc--ccCCCCCCEEEccCCeee
Confidence 543332 555666666666666653
No 344
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.84 E-value=2.2e-23 Score=234.46 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=50.8
Q ss_pred CCCcCeeeccCCcccccCCccccC-Ccccceeecc----ccccccc-----CcccccCCCCCCeeeccCC--cCCccchh
Q 042735 193 LSTLNEFDLSLNHIVGKIPKEFGK-LNSLTKLILR----GNQLIGH-----LPSEIGSLTKLEFLNLSTN--RFSSLIPE 260 (667)
Q Consensus 193 l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~----~n~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~ 260 (667)
+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|++++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 444444444444443333333322 4455555553 3333321 1122344555555555432 23333333
Q ss_pred hhhc-ccCCCeecCCCccCcc-ccchhhhcCCCCCEEECcCCCCC
Q 042735 261 SLGN-LLKLHYLDLSKYQFIQ-ELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 261 ~~~~-l~~L~~L~ls~n~~~~-~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
.+.. +++|+.|++++|++.+ .++..+..+++|+.|++++|.++
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3332 5556666666665543 23444455666666666666653
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.8e-20 Score=195.98 Aligned_cols=239 Identities=21% Similarity=0.129 Sum_probs=121.4
Q ss_pred CEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEeeCc
Q 042735 30 VKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGGN 108 (667)
Q Consensus 30 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n 108 (667)
++++-++++++ .+|..+ .++|++|+|++|+|+...+..|.. .+|++|+|++|.+.+.++.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~---------------- 72 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA---------------- 72 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT----------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh----------------
Confidence 45677777776 466655 356777777777776444444544 3466666666655443332
Q ss_pred ccccccCccCCCCCCCcE-EEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccC-CcCCCCc
Q 042735 109 HFRGPIPKCLRNCPNLVR-ISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSM-NNITRSI 186 (667)
Q Consensus 109 ~~~~~~p~~l~~l~~L~~-L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~ 186 (667)
..|.++++|++ +.+..|+++...+..|..+++|++|++++|.+.+..+..+....++..|++.+ +.+....
T Consensus 73 -------~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 73 -------DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp -------TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred -------hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 23344444433 33344445444444555555555555555555444444444444455555533 3343333
Q ss_pred CccccCCC-CcCeeeccCCcccccCCccccCCcccceeeccc-ccccccCcccccCCCCCCeeeccCCcCCccchhhhhc
Q 042735 187 PLEIGNLS-TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRG-NQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGN 264 (667)
Q Consensus 187 p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 264 (667)
+..|..+. .++.|+|++|.+....+..| ...+|+.|++++ |.+....+..|+++++|++|+|++|+++...+..+.+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 33344443 35556666666554333222 344566666653 3443333334566666666666666666544433333
Q ss_pred ccCCCeecCCCccCccccchhhhcCCCCCEEECcC
Q 042735 265 LLKLHYLDLSKYQFIQELPKELGKLVQLSELELSH 299 (667)
Q Consensus 265 l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~ 299 (667)
|+.|.+.++...+.+|. +..+++|+.+++.+
T Consensus 225 ---L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 225 ---LKKLRARSTYNLKKLPT-LEKLVALMEASLTY 255 (350)
T ss_dssp ---CCEEECTTCTTCCCCCC-TTTCCSCCEEECSC
T ss_pred ---chHhhhccCCCcCcCCC-chhCcChhhCcCCC
Confidence 33333333333455553 55666666666654
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.3e-20 Score=178.07 Aligned_cols=162 Identities=22% Similarity=0.245 Sum_probs=95.4
Q ss_pred CCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeec
Q 042735 122 PNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDL 201 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 201 (667)
++|++|+|++|++++..+..|..+++|++|++++|.+.+..+..|..+++|++|+|++|.+++..+..+.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 45666666666666555555666666666666666665544445566666666666666666544444566666666666
Q ss_pred cCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccc
Q 042735 202 SLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQE 281 (667)
Q Consensus 202 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~ 281 (667)
++|.+.+..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|++.+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCce
Confidence 66666555444556666666666666666554444455666666666666655432 23455555555555555
Q ss_pred cchhhhcCC
Q 042735 282 LPKELGKLV 290 (667)
Q Consensus 282 ~p~~l~~l~ 290 (667)
+|.+++.++
T Consensus 181 ip~~~~~l~ 189 (208)
T 2o6s_A 181 VRNSAGSVA 189 (208)
T ss_dssp BBCTTSSBC
T ss_pred eeccCcccc
Confidence 555555443
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=4.9e-20 Score=203.03 Aligned_cols=187 Identities=25% Similarity=0.331 Sum_probs=90.9
Q ss_pred CCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccC
Q 042735 52 SLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEG 131 (667)
Q Consensus 52 ~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 131 (667)
+|+.|+|++|++++ +|..+. .+|+.|+|++|.++ .+| ..+.+|+.|++++|++++ +|. +.+ +|+.|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 55555555555543 444332 33555555555554 233 223445555555555544 333 332 555555555
Q ss_pred CccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCC
Q 042735 132 NNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIP 211 (667)
Q Consensus 132 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 211 (667)
|++++ +|. .+++|+.|+|++|.+.+ +|. .+++|+.|+|++|.+++ +|. +. ++|+.|+|++|.++ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 55554 222 34555555555555543 333 34555555555555554 333 33 55555555555554 333
Q ss_pred ccccCCccc-------ceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcc
Q 042735 212 KEFGKLNSL-------TKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNL 265 (667)
Q Consensus 212 ~~~~~l~~L-------~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 265 (667)
. |.. +| +.|+|++|.++ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 3 332 44 55555555554 345545555555555555555555555555443
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=4.2e-20 Score=203.55 Aligned_cols=188 Identities=22% Similarity=0.296 Sum_probs=129.0
Q ss_pred CCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEeeC
Q 042735 28 SLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGG 107 (667)
Q Consensus 28 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~ 107 (667)
+|+.|+|++|.|++ +|..+ +++|++|+|++|+|+ .+|. ...+|+.|+|++|.+++ +|. +.. +|+.|++++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip~--~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLPE--LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCCC--CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-cccc--ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 66666666666664 55444 256666666666665 4451 12346666666666665 444 433 677777777
Q ss_pred cccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcC
Q 042735 108 NHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIP 187 (667)
Q Consensus 108 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 187 (667)
|++++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|.+.+ +|. |. ++|+.|+|++|.|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 77766 444 57788888888888876 333 56788888888888766 555 55 78888888888887 455
Q ss_pred ccccCCCCc-------CeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCC
Q 042735 188 LEIGNLSTL-------NEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLT 242 (667)
Q Consensus 188 ~~~~~l~~L-------~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 242 (667)
. +.. +| +.|+|++|.+. .+|..+..+++|+.|+|++|.+++.+|..++.+.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 5 544 66 88999999887 4677777799999999999999888888776653
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.4e-19 Score=174.38 Aligned_cols=140 Identities=21% Similarity=0.299 Sum_probs=61.9
Q ss_pred CCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCe
Q 042735 119 RNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNE 198 (667)
Q Consensus 119 ~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 198 (667)
..+++|++|+|++|++++..+..|..+++|++|++++|.+.+..+..|..+++|+.|++++|.+++..+..+.++++|++
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 128 (208)
T 2o6s_A 49 DELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKD 128 (208)
T ss_dssp TTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCE
Confidence 33344444444444444333333344444444444444444333333444444444444444444433333444444444
Q ss_pred eeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcc
Q 042735 199 FDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNL 265 (667)
Q Consensus 199 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 265 (667)
|+|++|.+.+..+..|..+++|+.|++++|.+.+ .+++|++|+++.|.++|.+|.+++.+
T Consensus 129 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 129 LRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred EECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 4444444444333334444455555555444332 23344555555555555555444443
No 350
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.81 E-value=8.2e-21 Score=209.18 Aligned_cols=164 Identities=15% Similarity=0.181 Sum_probs=121.6
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCch----HHhHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCceEEEE
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ----IADQKEFFAEIEALTKIRHRNIVKFYGFCSHARHSILIY 500 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~~~~~~lv~ 500 (667)
..+.||+|+||.||+|.. .+..+++|+......... ....+.|.+|++++++++|||||++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 456899999999999954 466788887654332211 112456899999999999999996666666778889999
Q ss_pred EecCCCChHHHhccc----------------cCCcccccccCCeeecCCCceEEecccccccccCCCCC-------cccc
Q 042735 501 EYLKRGSLATNLSND----------------AAAEELDISSKNVLLDLEHKAHVSDFGIAKFLKPDSSN-------WSAL 557 (667)
Q Consensus 501 ey~~~g~L~~~l~~~----------------~~~~~~dlk~~NiLld~~~~~kl~DFGla~~~~~~~~~-------~~~~ 557 (667)
||+++|+|.+++... ....|.||||+|||++. .+||+|||+++........ ....
T Consensus 419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~ 496 (540)
T 3en9_A 419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAV 496 (540)
T ss_dssp ECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhh
Confidence 999999999887641 11235599999999998 9999999999986543211 1357
Q ss_pred cccccccCCC--------CCCCchHHHHHHHHHHHHhCCCCC
Q 042735 558 VGTYRYVAPD--------YRKKCDVYSFRVLALEVIKGKHPR 591 (667)
Q Consensus 558 ~Gt~~y~aPE--------~~~~~DV~sfGvvl~ElltG~~p~ 591 (667)
+||+.||||| |..++|+||..+-.+|.+.++.+|
T Consensus 497 ~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 497 LSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 8999999999 566789999999999988887664
No 351
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.79 E-value=2.9e-21 Score=217.10 Aligned_cols=299 Identities=15% Similarity=0.134 Sum_probs=144.3
Q ss_pred CCCCcEEeccCCcCcCCCCcccc-CCCCCCEEEccCc-ccccc-CCccccCCCCCCeeeccccccceeCCCCCc----c-
Q 042735 2 LTNLRELHLRDNYLTGLIPTETW-NLKSLVKLGLGGN-QFRGS-LPSSVGNLSSLRYLFLFENNLSGSIPPSVG----N- 73 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~- 73 (667)
+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35667777777766654444443 4667777777776 44422 333344667777777777766543332222 1
Q ss_pred cccCEEEccccc--cccc-CCccccCCCCccEEEeeCc-ccccccCccCCCCCCCcEEEccCCc----------------
Q 042735 74 LMLTVLALENNH--FTGN-LRHNICRNGALERVIVGGN-HFRGPIPKCLRNCPNLVRISLEGNN---------------- 133 (667)
Q Consensus 74 ~~L~~L~L~~n~--l~~~-~~~~~~~~~~L~~L~l~~n-~~~~~~p~~l~~l~~L~~L~L~~n~---------------- 133 (667)
.+|+.|+|++|. +... +...+..+++|+.|++++| .+.+ +|..+..+++|+.|++..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 357777777665 2111 1111233466777776665 2222 44444445555555433221
Q ss_pred ----------cc----cccchhhhcCCCCCEEECcCCccCCcc-CccCCCCCCCCEEEccCCcCCC-CcCccccCCCCcC
Q 042735 134 ----------MR----GTISEAFGIYLNLTFLDISDNNFFGEI-ASNWGKCPKLSTLNVSMNNITR-SIPLEIGNLSTLN 197 (667)
Q Consensus 134 ----------~~----~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~ 197 (667)
+. +.++..+..+++|+.|++++|.+.+.. ...+..+++|+.|++++| +.. .++.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 00 112233335677777777777754332 222456677777777766 221 1122222456666
Q ss_pred eeeccC---------CcccccCCccc-cCCcccceeecccccccccCccccc-CCCCCCeeecc--C----CcCCcc---
Q 042735 198 EFDLSL---------NHIVGKIPKEF-GKLNSLTKLILRGNQLIGHLPSEIG-SLTKLEFLNLS--T----NRFSSL--- 257 (667)
Q Consensus 198 ~L~L~~---------n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~--- 257 (667)
+|+++. +.+++.....+ .++++|+.|.++.|.+++..+..+. .+++|+.|+++ + |.++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 666622 22322111111 1245555555555555443333332 35555555555 2 333311
Q ss_pred --chhhhhcccCCCeecCCCccCccccchhhhc-CCCCCEEECcCCCCC
Q 042735 258 --IPESLGNLLKLHYLDLSKYQFIQELPKELGK-LVQLSELELSHNFLG 303 (667)
Q Consensus 258 --~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~-l~~L~~L~l~~n~l~ 303 (667)
++..+..+++|+.|++++ ++....+..++. +++|++|++++|.++
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSS
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCc
Confidence 112234445555555544 333333333333 455555555555543
No 352
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.78 E-value=1.1e-20 Score=212.47 Aligned_cols=299 Identities=16% Similarity=0.106 Sum_probs=137.9
Q ss_pred CCCCcEEeccCC-cCcCC-CCccccCCCCCCEEEccCccccccCCcccc----CCCCCCeeeccccc--cce-eCCCCCc
Q 042735 2 LTNLRELHLRDN-YLTGL-IPTETWNLKSLVKLGLGGNQFRGSLPSSVG----NLSSLRYLFLFENN--LSG-SIPPSVG 72 (667)
Q Consensus 2 L~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~~L~L~~n~--l~~-~~p~~~~ 72 (667)
+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. +.. .++....
T Consensus 129 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVT 208 (594)
T ss_dssp CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHH
T ss_pred CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHH
Confidence 567888888877 44432 233344678888888888877654444433 55678888888775 211 0111111
Q ss_pred -ccccCEEEcccccccccCCccccCCCCccEEEeeCcc--------------------------c----ccccCccCCCC
Q 042735 73 -NLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNH--------------------------F----RGPIPKCLRNC 121 (667)
Q Consensus 73 -~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~--------------------------~----~~~~p~~l~~l 121 (667)
..+|+.|+|++|.....++..+..+++|+.|+++.+. + .+.++..+..+
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 1457777777763222244444444455555433221 0 01122222345
Q ss_pred CCCcEEEccCCcccccc-chhhhcCCCCCEEECcCCccCCc-cCccCCCCCCCCEEEccC---------CcCCCCcCccc
Q 042735 122 PNLVRISLEGNNMRGTI-SEAFGIYLNLTFLDISDNNFFGE-IASNWGKCPKLSTLNVSM---------NNITRSIPLEI 190 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~---------n~l~~~~p~~~ 190 (667)
++|++|+|++|.+++.. ...+..+++|+.|++++| +... ++.....+++|+.|++.+ +.++......+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 66666666666654322 122345566666666655 2211 111112355566665522 22221111111
Q ss_pred -cCCCCcCeeeccCCcccccCCcccc-CCcccceeecc--c----cccccc-----CcccccCCCCCCeeeccCCcCCcc
Q 042735 191 -GNLSTLNEFDLSLNHIVGKIPKEFG-KLNSLTKLILR--G----NQLIGH-----LPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 191 -~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~--~----n~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
.++++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++.. ++..+..+++|+.|+|++ .+++.
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 1245555555554444433222222 34555555555 2 222211 011133444555555543 33333
Q ss_pred chhhhhc-ccCCCeecCCCccCccccchhh-hcCCCCCEEECcCCCC
Q 042735 258 IPESLGN-LLKLHYLDLSKYQFIQELPKEL-GKLVQLSELELSHNFL 302 (667)
Q Consensus 258 ~p~~~~~-l~~L~~L~ls~n~~~~~~p~~l-~~l~~L~~L~l~~n~l 302 (667)
.+..+.. +++|+.|++++|.+.+..+..+ ..+++|++|++++|.+
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 2333332 4445555555544433333222 3344555555555544
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=1.8e-18 Score=175.73 Aligned_cols=169 Identities=25% Similarity=0.308 Sum_probs=85.1
Q ss_pred CCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeee
Q 042735 121 CPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFD 200 (667)
Q Consensus 121 l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 200 (667)
+++|+.|++++|.++.. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++ +| .+.++++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 44455555555544432 124445555555555555543322 4455555555555555543 22 255555555555
Q ss_pred ccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcc
Q 042735 201 LSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 201 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
+++|.+.+. +.+..+++|+.|++++|.+.+. ..++.+++|+.|++++|.+++..| +..+++|+.|++++|++.+
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 555555432 3355555555555555555432 345555555555555555555433 5555555555555555433
Q ss_pred ccchhhhcCCCCCEEECcCCCCC
Q 042735 281 ELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 281 ~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
+| .+..+++|+.|++++|.+.
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEE
T ss_pred -Ch-hhccCCCCCEEECcCCccc
Confidence 33 2555556666666655553
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=9.5e-19 Score=194.91 Aligned_cols=129 Identities=22% Similarity=0.317 Sum_probs=72.1
Q ss_pred ccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCC
Q 042735 94 ICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLS 173 (667)
Q Consensus 94 ~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 173 (667)
+..+.+|+.|++++|.+.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+. ..+..+++|+
T Consensus 83 l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~ 156 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLD 156 (605)
T ss_dssp GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCS
T ss_pred hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCC
Confidence 33444445555555544431 2456666666666666666542 3455666666666666666543 4455566666
Q ss_pred EEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccc
Q 042735 174 TLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIG 232 (667)
Q Consensus 174 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 232 (667)
.|+|++|.+.+..| +..+++|+.|+|++|.+.+. +.+..+++|+.|+|++|.+.+
T Consensus 157 ~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 157 TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred EEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 66666666655444 55566666666666655542 245555666666666665554
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2e-18 Score=192.33 Aligned_cols=189 Identities=24% Similarity=0.341 Sum_probs=131.0
Q ss_pred cCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcC
Q 042735 76 LTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISD 155 (667)
Q Consensus 76 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~ 155 (667)
+..+.+..+.+....+ +..+.+|+.|++++|.+... | .+..+++|+.|+|++|.+++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4445566666554332 34566777777877777643 3 47777888888888888776544 77777888888888
Q ss_pred CccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCc
Q 042735 156 NNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLP 235 (667)
Q Consensus 156 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 235 (667)
|.+.+ + +.+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+.+..|
T Consensus 97 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 87754 2 3577777778888877777653 3477777777777777777654 567777777777777777765544
Q ss_pred ccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcc
Q 042735 236 SEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 236 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
+..+++|+.|+|++|.+++. | .+..+++|+.|+|++|++.+
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEEC
T ss_pred --hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcC
Confidence 67777777777777777764 3 46677777777777777654
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.5e-18 Score=182.08 Aligned_cols=156 Identities=26% Similarity=0.233 Sum_probs=86.3
Q ss_pred CCcEEEccCCccccccchhhh-cCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeec
Q 042735 123 NLVRISLEGNNMRGTISEAFG-IYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDL 201 (667)
Q Consensus 123 ~L~~L~L~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 201 (667)
.++.|+|++|++++..+..|. .+++|++|+|++|++.+..+..|..+++|+.|+|++|+++...+..|.++++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 355555555555555555554 5555555555555555544555555556666666666555544445555666666666
Q ss_pred cCCcccccCCccccCCcccceeecccccccccCcccc---cCCCCCCeeeccCCcCCccchhhhhcccC--CCeecCCCc
Q 042735 202 SLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEI---GSLTKLEFLNLSTNRFSSLIPESLGNLLK--LHYLDLSKY 276 (667)
Q Consensus 202 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ls~n 276 (667)
++|.+.+..|..|.++++|+.|+|++|.+.+..+..| ..+++|+.|+|++|++++..+..+..++. |+.|++++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 6666555555556666666666666666554333333 34566666666666666554455555544 245555555
Q ss_pred cC
Q 042735 277 QF 278 (667)
Q Consensus 277 ~~ 278 (667)
.+
T Consensus 200 ~~ 201 (361)
T 2xot_A 200 PL 201 (361)
T ss_dssp CE
T ss_pred Cc
Confidence 43
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.6e-18 Score=182.03 Aligned_cols=176 Identities=25% Similarity=0.234 Sum_probs=154.0
Q ss_pred cEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCC-CCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccC
Q 042735 125 VRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWG-KCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSL 203 (667)
Q Consensus 125 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 203 (667)
+.+++++++++. +|..+ ...++.|+|++|.+.+..+..+. .+++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSC--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 678889998875 44333 35689999999999888888887 999999999999999988888899999999999999
Q ss_pred CcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhh---hcccCCCeecCCCccCcc
Q 042735 204 NHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESL---GNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 204 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~ls~n~~~~ 280 (667)
|.+.+..+..|.++++|+.|+|++|.+.+..|..|.++++|+.|+|++|++++..+..+ ..+++|+.|+|++|++..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999998889999999999999999999998766666 578999999999999876
Q ss_pred ccchhhhcCCC--CCEEECcCCCCC
Q 042735 281 ELPKELGKLVQ--LSELELSHNFLG 303 (667)
Q Consensus 281 ~~p~~l~~l~~--L~~L~l~~n~l~ 303 (667)
..+..+..++. |+.|++++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 66678888887 489999999874
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=3.3e-18 Score=166.24 Aligned_cols=153 Identities=20% Similarity=0.217 Sum_probs=106.1
Q ss_pred EEEeeCcccccccCccCCCCCCCcEEEccCCccccccc-hhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCC
Q 042735 102 RVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTIS-EAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMN 180 (667)
Q Consensus 102 ~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 180 (667)
.+++++|.++. +|..+. +.++.|+|++|++++..+ ..|..+++|++|+|++|.+.+..+..|..+++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555543 344332 345677777777776643 45677777777777777777666667777777777777777
Q ss_pred cCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCcc
Q 042735 181 NITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 181 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
.+++..+..|.++++|++|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+...
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 77766666677777777777777777776677777777777777777777766677777777777777777777654
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=3.3e-18 Score=166.26 Aligned_cols=134 Identities=24% Similarity=0.253 Sum_probs=83.8
Q ss_pred CCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeec
Q 042735 122 PNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDL 201 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 201 (667)
++|+.|+|++|++++..+..|..+++|++|+|++|.+.+..|..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666655556666666666666666666555666666666666666666666544444566666666666
Q ss_pred cCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCC
Q 042735 202 SLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFS 255 (667)
Q Consensus 202 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 255 (667)
++|.+.+..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666555556666666666666666666555555666666666666666554
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=3.6e-18 Score=165.98 Aligned_cols=132 Identities=24% Similarity=0.338 Sum_probs=63.3
Q ss_pred CCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeecc
Q 042735 171 KLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLS 250 (667)
Q Consensus 171 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 250 (667)
+|+.|+|++|.+++..+..|.++++|+.|+|++|.+.+..|..|.++++|+.|+|++|.++...+..|.++++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 34444444444444333344444444444444444444444444444444444444444443333334445555555555
Q ss_pred CCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCC
Q 042735 251 TNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFL 302 (667)
Q Consensus 251 ~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l 302 (667)
+|.+++..|..|..+++|+.|+|++|++.+..+..+..+++|++|++++|++
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 5555544444455555555555555554444444455555555555555544
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=3.4e-18 Score=166.16 Aligned_cols=132 Identities=23% Similarity=0.242 Sum_probs=73.5
Q ss_pred CCEEEccCCcCCCCcC-ccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeecc
Q 042735 172 LSTLNVSMNNITRSIP-LEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLS 250 (667)
Q Consensus 172 L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 250 (667)
++.|+|++|.+++..+ ..|.++++|++|+|++|.+.+..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3455555555544322 234555555555555555555444455555555555555555555555555555555666666
Q ss_pred CCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 251 TNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 251 ~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
+|++++..|..|.++++|+.|++++|++.+..|..|..+++|++|++++|++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 55555555555555555666666655555555555556666666666666553
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=6.1e-21 Score=211.32 Aligned_cols=217 Identities=16% Similarity=0.090 Sum_probs=139.8
Q ss_pred cCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEE
Q 042735 24 WNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERV 103 (667)
Q Consensus 24 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 103 (667)
..+++|+.|+|++|++. .+|.+++++++|+.|++++|.....+|.. +..+.+.+..|..+..+.+|+.|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l----------l~~~~~~~~~~~~l~~l~~L~~L 414 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL----------MRALDPLLYEKETLQYFSTLKAV 414 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH----------HHHHCTGGGHHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH----------HHhcccccCCHHHHHHHHhcccC
Confidence 46778888888888886 67888888888888888666421111110 01112223344444444445444
Q ss_pred E-eeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcC
Q 042735 104 I-VGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNI 182 (667)
Q Consensus 104 ~-l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 182 (667)
+ +..|.+ .+|+.+.+.+|.++...+ ..|+.|+|++|.+.+ +|. ++.+++|+.|+|++|.+
T Consensus 415 ~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 415 DPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp CGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred cchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 4 333322 123334444455443221 247777777777765 454 77777888888888877
Q ss_pred CCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccC-cccccCCCCCCeeeccCCcCCccchh-
Q 042735 183 TRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHL-PSEIGSLTKLEFLNLSTNRFSSLIPE- 260 (667)
Q Consensus 183 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~- 260 (667)
+ .+|..++++++|+.|+|++|.+++ +| .|+.+++|+.|+|++|.+++.. |..++.+++|+.|+|++|.+++.+|.
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 7 567777888888888888888776 45 6778888888888888887665 77788888888888888888776442
Q ss_pred --hhhcccCCCeecC
Q 042735 261 --SLGNLLKLHYLDL 273 (667)
Q Consensus 261 --~~~~l~~L~~L~l 273 (667)
.+..+++|+.|++
T Consensus 553 ~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 553 ERLAEMLPSVSSILT 567 (567)
T ss_dssp THHHHHCTTCSEEEC
T ss_pred HHHHHHCcccCccCC
Confidence 2334677777753
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=4.3e-21 Score=212.55 Aligned_cols=202 Identities=18% Similarity=0.105 Sum_probs=135.6
Q ss_pred CCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCcc-------------ccccCCccccCCCCCCeee-ccccccceeC
Q 042735 2 LTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQ-------------FRGSLPSSVGNLSSLRYLF-LFENNLSGSI 67 (667)
Q Consensus 2 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~~~ 67 (667)
.++|+.|+|++|.++. +|..+.++++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~~-Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKSTV-LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHHH-HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHHh-hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 5789999999999985 69999999999999998886 4556677777777787777 6666543
Q ss_pred CCCCcccccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCC
Q 042735 68 PPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLN 147 (667)
Q Consensus 68 p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 147 (667)
.|..+.+++|.++.. .+ ..|+.|+|++|.+++ +|. ++.+++
T Consensus 424 -------~L~~l~l~~n~i~~l------------------------~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~ 464 (567)
T 1dce_A 424 -------DLRSKFLLENSVLKM------------------------EY------ADVRVLHLAHKDLTV-LCH-LEQLLL 464 (567)
T ss_dssp -------HHHHHHHHHHHHHHH------------------------HH------TTCSEEECTTSCCSS-CCC-GGGGTT
T ss_pred -------hhhhhhhhccccccc------------------------Cc------cCceEEEecCCCCCC-CcC-cccccc
Confidence 233344444444321 11 135666666666665 333 666666
Q ss_pred CCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccC-CccccCCcccceeecc
Q 042735 148 LTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKI-PKEFGKLNSLTKLILR 226 (667)
Q Consensus 148 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~ 226 (667)
|+.|+|++|.+. .+|..++.+++|+.|+|++|.+++ +| .++++++|+.|+|++|.+.+.. |..|+.+++|+.|+|+
T Consensus 465 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 465 VTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECT
T ss_pred CcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEec
Confidence 666666666665 556666667777777777777765 44 5677777777777777776665 6677777777777777
Q ss_pred cccccccCcc---cccCCCCCCeeec
Q 042735 227 GNQLIGHLPS---EIGSLTKLEFLNL 249 (667)
Q Consensus 227 ~n~l~~~~p~---~~~~l~~L~~L~L 249 (667)
+|.+++.+|. .+..+++|+.|++
T Consensus 542 ~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 542 GNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777655442 1334677777754
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=2.3e-18 Score=174.92 Aligned_cols=185 Identities=20% Similarity=0.263 Sum_probs=139.4
Q ss_pred eccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccccccc
Q 042735 9 HLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALENNHFT 87 (667)
Q Consensus 9 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~ 87 (667)
.+..+.+++..+ +..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +.. .+|+.|+|++|.++
T Consensus 30 ~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 103 (291)
T 1h6t_A 30 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK 103 (291)
T ss_dssp HTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC
Confidence 444555554322 24567777777777777643 3 36777777777777777765433 433 45777777777776
Q ss_pred ccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCC
Q 042735 88 GNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWG 167 (667)
Q Consensus 88 ~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 167 (667)
+. ..+..+.+|+.|++++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+.+..+ +.
T Consensus 104 ~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~ 175 (291)
T 1h6t_A 104 DL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA 175 (291)
T ss_dssp CG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hc
Confidence 52 2377778888888888888764 4688899999999999999865 578899999999999999977554 88
Q ss_pred CCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCccccc
Q 042735 168 KCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGK 209 (667)
Q Consensus 168 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 209 (667)
.+++|+.|++++|.+++. + .+.++++|+.|++++|.+...
T Consensus 176 ~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 176 GLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp TCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 999999999999999864 4 488999999999999988753
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=1.7e-17 Score=162.24 Aligned_cols=134 Identities=22% Similarity=0.265 Sum_probs=72.3
Q ss_pred CCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeec
Q 042735 122 PNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDL 201 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 201 (667)
++|+.|+|++|.+++..+..|..+++|++|+|++|.+.+..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 55556666666555555555555555555555555554443444555555555555555555444444555555555555
Q ss_pred cCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCc
Q 042735 202 SLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 202 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 256 (667)
++|.+. .+|..+..+++|+.|+|++|++.+..+..+..+++|+.|+|++|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555554 344455555555555555555554444445555555555555555543
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=2.3e-17 Score=161.40 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=77.8
Q ss_pred cEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCC
Q 042735 125 VRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLN 204 (667)
Q Consensus 125 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 204 (667)
+.++.+++.++.. |..+ .++|++|+|++|.+.+..|..|..+++|+.|+|++|.+....+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~~i-p~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHASV-PAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCcc-CCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 4566666665432 2221 255556666666555555555555555555555555555444444455555555555555
Q ss_pred cccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccC
Q 042735 205 HIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQF 278 (667)
Q Consensus 205 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~ 278 (667)
.+.+..+..|..+++|+.|+|++|++. .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 555444444555555555555555554 3444455555555555555555544444444444444444444443
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.3e-18 Score=198.78 Aligned_cols=141 Identities=25% Similarity=0.270 Sum_probs=68.2
Q ss_pred CccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCC
Q 042735 115 PKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLS 194 (667)
Q Consensus 115 p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 194 (667)
|..+..+++|+.|+|++|.+. .++..+..+++|++|+|++|.+. .+|..|..+++|+.|+|++|.|+ .+|..|++|+
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 444555555555555555554 33333445555555555555554 44555555555555555555554 3454555555
Q ss_pred CcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCC-CCCeeeccCCcCCccch
Q 042735 195 TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLT-KLEFLNLSTNRFSSLIP 259 (667)
Q Consensus 195 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 259 (667)
+|++|+|++|.+. .+|..|+.|++|+.|+|++|.+++.+|..+..+. .+..|+|++|.+++.+|
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 5555555555543 3444455555555555555555544444443321 11224455555555444
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.9e-17 Score=157.92 Aligned_cols=150 Identities=19% Similarity=0.234 Sum_probs=80.5
Q ss_pred CCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeec
Q 042735 146 LNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLIL 225 (667)
Q Consensus 146 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 225 (667)
++|+.|++++|.+. .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|.+.+..+..|+.+++|+.|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 34444444444443 222 34444455555555553321 224555555555555555555545555556666666666
Q ss_pred ccccccccCcccccCCCCCCeeeccCCc-CCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCCCCC
Q 042735 226 RGNQLIGHLPSEIGSLTKLEFLNLSTNR-FSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHNFLG 303 (667)
Q Consensus 226 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n~l~ 303 (667)
++|.+.+..|..++.+++|++|++++|. ++. +| .+..+++|+.|++++|++.+ ++ .+..+++|++|++++|.++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 6666655555556666666666666665 433 33 45566666666666666543 33 4566677777777777664
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.9e-17 Score=157.97 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=73.7
Q ss_pred CCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeee
Q 042735 121 CPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFD 200 (667)
Q Consensus 121 l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 200 (667)
+++|+.|++++|.++. ++ .+..+++|++|++++|.+. .+..+..+++|++|++++|.+++..+..+.++++|++|+
T Consensus 43 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 3444444444444442 22 3444445555555554332 122444455555555555555444444455555555555
Q ss_pred ccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccC
Q 042735 201 LSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQF 278 (667)
Q Consensus 201 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~ 278 (667)
+++|.+.+..|..++.+++|+.|++++|.+.+.+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 55555554444455555555555555554222333 455555555555555555542 2 455555555555555553
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=3.5e-18 Score=170.88 Aligned_cols=166 Identities=22% Similarity=0.294 Sum_probs=90.0
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEccc
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLALEN 83 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L~~ 83 (667)
+..++++.|.++++. .+..+++|++|++++|+++. +| .+..+++|++|+|++|++++..| +.. .+|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 344556666665432 34556666666666666653 33 46666666666666666654322 333 3455555555
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccC
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIA 163 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 163 (667)
|.+++. |. +.. ++|+.|+|++|++++. ..+..+++|+.|++++|++.+. +
T Consensus 95 N~l~~l-------------------------~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 95 NRLKNL-------------------------NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V 144 (263)
T ss_dssp SCCSCC-------------------------TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G
T ss_pred CccCCc-------------------------Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h
Confidence 555432 11 111 5555555555555542 2355555666666666655443 2
Q ss_pred ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCccccc
Q 042735 164 SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGK 209 (667)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 209 (667)
.+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 455556666666666666544 3455666666666666665543
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=2.8e-18 Score=195.85 Aligned_cols=196 Identities=20% Similarity=0.218 Sum_probs=104.8
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEee
Q 042735 27 KSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIVG 106 (667)
Q Consensus 27 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 106 (667)
+.++.|+|.+|.+.. .+..+ |+.++|+.|.|.+ +++..|.+. ..+..+..+..|+.|+++
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls 232 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLS 232 (727)
T ss_dssp ---------------------------------------------------------------------CCCCCCEEECT
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccC-------------cccccccee-cChhhhccCCCCcEEECC
Confidence 446666776666653 23222 3444444444332 233334433 345556666777777777
Q ss_pred CcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCc
Q 042735 107 GNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSI 186 (667)
Q Consensus 107 ~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 186 (667)
+|.+. .+|..+.++++|+.|+|++|.++ .+|..|+.+++|++|+|++|.+. .+|..|..+++|++|+|++|.++ .+
T Consensus 233 ~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 233 NLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp TSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CC
T ss_pred CCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-cc
Confidence 77776 56666667888888888888887 66777888888888888888876 66888888888888888888886 56
Q ss_pred CccccCCCCcCeeeccCCcccccCCccccCCcc-cceeecccccccccCcccccCCCCCCeeeccCC
Q 042735 187 PLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNS-LTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTN 252 (667)
Q Consensus 187 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 252 (667)
|..|++|++|+.|+|++|.+.+.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 767888888888888888888777776654422 234678888888777654 445556555
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=2.1e-17 Score=165.12 Aligned_cols=169 Identities=22% Similarity=0.297 Sum_probs=107.7
Q ss_pred CCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeee
Q 042735 121 CPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFD 200 (667)
Q Consensus 121 l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 200 (667)
+.++..+++..|.+++.. .+..+++|++|++++|.+.. ++ .+..+++|+.|+|++|.+++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 444555566666665433 45566666666666666643 33 45666677777777776665443 66677777777
Q ss_pred ccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcc
Q 042735 201 LSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 201 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
|++|.+.+. |. +.. ++|+.|++++|.+++ + ..++.+++|+.|+|++|++++. + .+..+++|+.|++++|++.+
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 777766542 32 222 677777777777664 2 2466777777777777777664 3 56667777777777777655
Q ss_pred ccchhhhcCCCCCEEECcCCCCCC
Q 042735 281 ELPKELGKLVQLSELELSHNFLGR 304 (667)
Q Consensus 281 ~~p~~l~~l~~L~~L~l~~n~l~~ 304 (667)
. ..+..+++|+.|++++|.+..
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEEC
T ss_pred h--HHhccCCCCCEEeCCCCcccC
Confidence 4 556677777777777777644
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=4.1e-16 Score=161.38 Aligned_cols=259 Identities=13% Similarity=0.081 Sum_probs=131.3
Q ss_pred CCCCcEEeccCCcCc--CCCCccccCCCCCCEEEccCccccccCCccccC--------CCCCCeeeccccccceeCCCCC
Q 042735 2 LTNLRELHLRDNYLT--GLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGN--------LSSLRYLFLFENNLSGSIPPSV 71 (667)
Q Consensus 2 L~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~--------l~~L~~L~L~~n~l~~~~p~~~ 71 (667)
+++|+.|||++|+|. ...+.. ++.+..+.+..|.| .+.+|.+ +++|+.|+|.+ .++...+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999998 221111 12233344444422 2233444 55555555555 4544333444
Q ss_pred cc-cccCEEEcccccccccCCccccCCCCccEEEeeCccc----ccccCccCCCCCCCc-EEEccCCccccccchh-h--
Q 042735 72 GN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHF----RGPIPKCLRNCPNLV-RISLEGNNMRGTISEA-F-- 142 (667)
Q Consensus 72 ~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~----~~~~p~~l~~l~~L~-~L~L~~n~~~~~~~~~-~-- 142 (667)
.. .+|+.++|++|.+....+..|....++..+.+..+.. ...-..++.++.+|+ .+.+.... .++.. +
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 44 3455555555555544444454444444443332111 111123344455555 33333221 11111 1
Q ss_pred -hcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccc
Q 042735 143 -GIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLT 221 (667)
Q Consensus 143 -~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 221 (667)
....++..+.+.++-...........+++|+.|+|++|+++...+..|.++++|+.++|..| +..+.+..|.++.+|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 12334445544433111000000112556666666666666555556666666666666665 5444555666666666
Q ss_pred -eeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeec
Q 042735 222 -KLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLD 272 (667)
Q Consensus 222 -~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 272 (667)
.+++.+ .+....+.+|.++++|+.+++++|.++.+.+.+|.++++|+.++
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 666666 45544556666777777777766777666666676766766664
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=8.3e-17 Score=166.66 Aligned_cols=259 Identities=15% Similarity=0.136 Sum_probs=158.9
Q ss_pred CCCCCEEEccCccccccCCccccC-CCCCCeeeccccccc--eeCCCCCcccccCEEEcccccccccCCccccC------
Q 042735 26 LKSLVKLGLGGNQFRGSLPSSVGN-LSSLRYLFLFENNLS--GSIPPSVGNLMLTVLALENNHFTGNLRHNICR------ 96 (667)
Q Consensus 26 l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~n~l~--~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~------ 96 (667)
+.+|+.|.++++- ....-..+.. +++|+.|||++|++. ...+..+.. +..+.+..|.+. ...|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~~I~---~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMANFVP---AYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTTEEC---TTTTEEEETTEE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccccc--cccccccccccC---HHHhcccccccc
Confidence 5678899998763 2222233444 788999999999987 333333322 344555555332 234444
Q ss_pred --CCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCcc----CCccCccCCCCC
Q 042735 97 --NGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNF----FGEIASNWGKCP 170 (667)
Q Consensus 97 --~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l----~~~~~~~~~~l~ 170 (667)
+.+|+.+++.. +++..-+.+|.+|++|+.|+|..|.+....+.+|....++..+.+..+.. ...-..+|..+.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 78888888887 77766677788888888888888888777777787777777776655321 112233444455
Q ss_pred CCC-EEEccCCcCCCCcCccc----------------------------cCCCCcCeeeccCCcccccCCccccCCcccc
Q 042735 171 KLS-TLNVSMNNITRSIPLEI----------------------------GNLSTLNEFDLSLNHIVGKIPKEFGKLNSLT 221 (667)
Q Consensus 171 ~L~-~L~L~~n~l~~~~p~~~----------------------------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 221 (667)
.|+ .+.+.... .++..+ ..+++|+.++|++|.+..+.+..|.++.+|+
T Consensus 177 ~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 177 PLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp CCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred ccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 555 33332211 111100 1256677777777666655556677777777
Q ss_pred eeecccccccccCcccccCCCCCC-eeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEE
Q 042735 222 KLILRGNQLIGHLPSEIGSLTKLE-FLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELE 296 (667)
Q Consensus 222 ~L~L~~n~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~ 296 (667)
.|+|.+| +....+.+|.++++|+ .+++.+ .++.+.+.+|.++.+|+.++++.|++...-+..|..+++|+.++
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 7777666 5545555667777777 777765 55555566677777777777766665555555666676776664
No 375
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.64 E-value=1e-16 Score=161.60 Aligned_cols=121 Identities=17% Similarity=0.104 Sum_probs=90.5
Q ss_pred HcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCch-----H---------HhHHHHHHHHHHHHhcCCCCeeE
Q 042735 420 INDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQ-----I---------ADQKEFFAEIEALTKIRHRNIVK 485 (667)
Q Consensus 420 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~-----~---------~~~~~~~~E~~~l~~l~H~niv~ 485 (667)
-..|...+.||+|+||.||+|...+++.+|||.+........ . .....+.+|++++++++| ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CC
Confidence 344566789999999999999987789999999864321100 0 134579999999999995 55
Q ss_pred EEEEEEeCCceEEEEEecCCCChHHHhcccc------------------CCcccccccCCeeecCCCceEEeccccccc
Q 042735 486 FYGFCSHARHSILIYEYLKRGSLATNLSNDA------------------AAEELDISSKNVLLDLEHKAHVSDFGIAKF 546 (667)
Q Consensus 486 ~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------------~~~~~dlk~~NiLld~~~~~kl~DFGla~~ 546 (667)
+++++.. +..++||||+++|+|.+ +.... ...|.||||+|||++ ++.+||+|||+|+.
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE
Confidence 5554433 56799999999999987 43221 123459999999999 99999999999974
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=9.5e-16 Score=145.42 Aligned_cols=130 Identities=27% Similarity=0.340 Sum_probs=73.5
Q ss_pred cEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCc-cCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccC
Q 042735 125 VRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIAS-NWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSL 203 (667)
Q Consensus 125 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 203 (667)
+.+++++|+++. +|..+. .+|++|++++|.+.+..+. .|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 456666666643 333221 2566666666665544433 355566666666666666555555566666666666666
Q ss_pred CcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCcc
Q 042735 204 NHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 204 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
|.+.+..+..|.++++|+.|+|++|++++..|..+..+++|++|+|++|.+.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666555555555556666666666665555555555555666666666555543
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=1.3e-15 Score=144.53 Aligned_cols=131 Identities=24% Similarity=0.306 Sum_probs=80.2
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCc-cccCCCCcCeeeccCCcccccCCccccCCcccceeeccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPL-EIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRG 227 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 227 (667)
+++++++|.+ +.+|..+.. +|+.|++++|.+++..+. .+.++++|++|+|++|.+.+..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4566666665 344444332 566666666666554443 356666666666666666666666666666666666666
Q ss_pred ccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCcccc
Q 042735 228 NQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQEL 282 (667)
Q Consensus 228 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~ 282 (667)
|++++..+..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+....
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666655555666666666666666666666666666666666666666655443
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=9.8e-16 Score=142.00 Aligned_cols=131 Identities=24% Similarity=0.194 Sum_probs=67.4
Q ss_pred CCCCEEEccCCcCC-CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeee
Q 042735 170 PKLSTLNVSMNNIT-RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLN 248 (667)
Q Consensus 170 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 248 (667)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+.+. ..+..+++|+.|++++|.+.+.+|..++.+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444444444443 33444444455555555555554433 3455555555555555555544454454555555555
Q ss_pred ccCCcCCccc-hhhhhcccCCCeecCCCccCccccc---hhhhcCCCCCEEECcCCCC
Q 042735 249 LSTNRFSSLI-PESLGNLLKLHYLDLSKYQFIQELP---KELGKLVQLSELELSHNFL 302 (667)
Q Consensus 249 Ls~N~l~~~~-p~~~~~l~~L~~L~ls~n~~~~~~p---~~l~~l~~L~~L~l~~n~l 302 (667)
|++|.+++.. +..+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 5555555432 1455555555555555555443333 2555566666666666654
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=7e-16 Score=142.98 Aligned_cols=128 Identities=24% Similarity=0.238 Sum_probs=58.2
Q ss_pred CCEEECcCCccC-CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecc
Q 042735 148 LTFLDISDNNFF-GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILR 226 (667)
Q Consensus 148 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 226 (667)
|+.|++++|.+. +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|.+.+.+|..+..+++|+.|+++
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 333333333333 23333333444444444444444332 334444444444444444444344444444455555555
Q ss_pred cccccccC-cccccCCCCCCeeeccCCcCCccch---hhhhcccCCCeecCCCcc
Q 042735 227 GNQLIGHL-PSEIGSLTKLEFLNLSTNRFSSLIP---ESLGNLLKLHYLDLSKYQ 277 (667)
Q Consensus 227 ~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls~n~ 277 (667)
+|.+.+.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 55444321 1345555555555555555554433 345555555555555554
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=6.6e-16 Score=140.07 Aligned_cols=126 Identities=22% Similarity=0.246 Sum_probs=60.2
Q ss_pred CCCEEECcCCccC-CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeec
Q 042735 147 NLTFLDISDNNFF-GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLIL 225 (667)
Q Consensus 147 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 225 (667)
+|+.|++++|.+. +.+|..+..+++|+.|++++|.+++. ..+.++++|++|++++|.+.+.+|..++.+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 4455555555544 34444445555555555555555433 33444555555555555544434444444445555555
Q ss_pred cccccccc-CcccccCCCCCCeeeccCCcCCccch---hhhhcccCCCeecCC
Q 042735 226 RGNQLIGH-LPSEIGSLTKLEFLNLSTNRFSSLIP---ESLGNLLKLHYLDLS 274 (667)
Q Consensus 226 ~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls 274 (667)
++|.+.+. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55544432 12444555555555555555544433 344444555555443
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1.5e-15 Score=137.75 Aligned_cols=129 Identities=23% Similarity=0.197 Sum_probs=114.6
Q ss_pred CCCCCEEEccCCcCC-CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCee
Q 042735 169 CPKLSTLNVSMNNIT-RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFL 247 (667)
Q Consensus 169 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 247 (667)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+.+. ..++.+++|+.|++++|.+.+.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 77888889999999999999999876 778999999999999999998788888889999999
Q ss_pred eccCCcCCcc-chhhhhcccCCCeecCCCccCccccc---hhhhcCCCCCEEECcC
Q 042735 248 NLSTNRFSSL-IPESLGNLLKLHYLDLSKYQFIQELP---KELGKLVQLSELELSH 299 (667)
Q Consensus 248 ~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~n~~~~~~p---~~l~~l~~L~~L~l~~ 299 (667)
++++|.+++. .+..+..+++|+.|++++|++.+..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999884 34789999999999999999876655 5789999999999864
No 382
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=7.6e-14 Score=147.70 Aligned_cols=264 Identities=11% Similarity=0.052 Sum_probs=152.8
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcccccccccCCccccCCCCccEEEe
Q 042735 26 LKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALENNHFTGNLRHNICRNGALERVIV 105 (667)
Q Consensus 26 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l 105 (667)
+..++.+.+.++ ++.+-..+|.+. +|+.+.|.+| ++..-...|.+..|+.+.|.+ .+.......|.++.+|+.+++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 355555555433 333444455543 4566655444 443334444444555555554 444444455556666666666
Q ss_pred eCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCC
Q 042735 106 GGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRS 185 (667)
Q Consensus 106 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 185 (667)
..|+++..-..+|. +.+|+.+.|..+ ++.....+|.++.+|+.+++.+| +...-..+|.+ .+|+.+.+. +.++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEE
Confidence 66666544444444 466666666533 55555566666666666666654 33333445555 566666663 334444
Q ss_pred cCccccCCCCcCeeeccCCccc-----ccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccchh
Q 042735 186 IPLEIGNLSTLNEFDLSLNHIV-----GKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPE 260 (667)
Q Consensus 186 ~p~~~~~l~~L~~L~L~~n~l~-----~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 260 (667)
.+..|.++++|+.+++..|.+. ...+..|.++++|+.+.+.+ .+...-..+|.++.+|+.++|..| ++.+.+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4556666777777776665543 23455677777777777763 355455566777777777777544 5555566
Q ss_pred hhhcccCCCeecCCCccCccccchhhhcCC-CCCEEECcCCC
Q 042735 261 SLGNLLKLHYLDLSKYQFIQELPKELGKLV-QLSELELSHNF 301 (667)
Q Consensus 261 ~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~-~L~~L~l~~n~ 301 (667)
+|.++ +|+.+++.+|......+..|..++ ++..|.+..+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 77777 777777777766555555566653 56677665543
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=5.3e-14 Score=148.91 Aligned_cols=262 Identities=12% Similarity=0.106 Sum_probs=207.9
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEEc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLAL 81 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~L 81 (667)
..++.+.+.+ .++.+.+.+|.++ +|+.+.|..| +..+-..+|.+. +|+.+.+.+ .+...-+..|.. .+|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4566677765 4777778888886 7999999877 666667788874 699999975 566555667766 56999999
Q ss_pred ccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCc
Q 042735 82 ENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGE 161 (667)
Q Consensus 82 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 161 (667)
.+|.++......|. ..+|+.+.+..+ +...-..+|.++++|+.+.|..| ++.....+|.+ .+|+.+.+. +.+...
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEE
Confidence 99988865555555 689999999744 77667788999999999999875 66667778887 789999995 446555
Q ss_pred cCccCCCCCCCCEEEccCCcCC-----CCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcc
Q 042735 162 IASNWGKCPKLSTLNVSMNNIT-----RSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS 236 (667)
Q Consensus 162 ~~~~~~~l~~L~~L~L~~n~l~-----~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 236 (667)
-..+|.+|++|+.+.+.+|.+. ...+..|.++++|+.++|.. .+..+-...|.++.+|+.+.|..| +...-..
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 6789999999999999988765 34567799999999999994 476666778999999999999665 6656677
Q ss_pred cccCCCCCCeeeccCCcCCccchhhhhccc-CCCeecCCCcc
Q 042735 237 EIGSLTKLEFLNLSTNRFSSLIPESLGNLL-KLHYLDLSKYQ 277 (667)
Q Consensus 237 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~n~ 277 (667)
+|.++ +|+.+++++|.+....+..|.+++ .++.|.+..+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 89999 999999999998877777787774 78888887664
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=137.72 Aligned_cols=105 Identities=28% Similarity=0.354 Sum_probs=46.3
Q ss_pred CCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeecc
Q 042735 171 KLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLS 250 (667)
Q Consensus 171 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 250 (667)
+|+.|+|++|.++ .+|..|.++++|+.|+|++|.+.+..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444444444443 233444444444444444444444434444444444444444444444444444444444444444
Q ss_pred CCcCCccchhhhhcccCCCeecCCCc
Q 042735 251 TNRFSSLIPESLGNLLKLHYLDLSKY 276 (667)
Q Consensus 251 ~N~l~~~~p~~~~~l~~L~~L~ls~n 276 (667)
+|.++...+..|..+++|+.|++++|
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N 136 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGAN 136 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCeeChhhhhcCccccEEEeCCC
Confidence 44444433333444444444444443
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=1.9e-14 Score=134.57 Aligned_cols=131 Identities=24% Similarity=0.232 Sum_probs=74.3
Q ss_pred cEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCC
Q 042735 125 VRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLN 204 (667)
Q Consensus 125 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 204 (667)
+.+++++|+++.. |. ...++|+.|++++|.+.+..+..|..+++|++|++++|.+++..+..+.++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~--~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CT--TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CC--CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4455555555432 21 12245566666666655444445556666666666666665544444566666666666666
Q ss_pred cccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCccc
Q 042735 205 HIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLI 258 (667)
Q Consensus 205 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 258 (667)
.+.+..+..|..+++|+.|++++|.+.+..+..+..+++|++|+|++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 666555555566666666666666665444444556666666666666665543
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=136.94 Aligned_cols=128 Identities=20% Similarity=0.282 Sum_probs=91.7
Q ss_pred cEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCC
Q 042735 125 VRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLN 204 (667)
Q Consensus 125 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 204 (667)
+.+++++|.++. +|..+ ..+|++|++++|.+. .+|..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 455666666653 23222 246677777777764 45566777777777777777777766667777778888888888
Q ss_pred cccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCCcCCc
Q 042735 205 HIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 205 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 256 (667)
.+.+..+..|..+++|+.|+|++|.++...+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8777777778888888888888888876666677888888888888888764
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=3.1e-14 Score=133.05 Aligned_cols=128 Identities=23% Similarity=0.227 Sum_probs=65.0
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
+.+++++|.+.. +|..+ .++|+.|++++|.+++..+..+.++++|++|++++|.+.+..+..|..+++|+.|++++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 456666665542 33222 245566666666555544444555555555555555555444444455555555555555
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCc
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFI 279 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~ 279 (667)
.+++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 555444444455555555555555555443333444444444444444443
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.9e-16 Score=151.19 Aligned_cols=131 Identities=24% Similarity=0.293 Sum_probs=72.3
Q ss_pred cCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCC
Q 042735 165 NWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKL 244 (667)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 244 (667)
.+..+++|+.|++++|.+++ +| .+.++++|+.|++++|.+. .+|..+..+++|+.|++++|.+.+ +| .++.+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44455555555555555544 33 4555555555555555554 344445555566666666666553 23 45555666
Q ss_pred CeeeccCCcCCccch-hhhhcccCCCeecCCCccCccccch----------hhhcCCCCCEEECcCCCC
Q 042735 245 EFLNLSTNRFSSLIP-ESLGNLLKLHYLDLSKYQFIQELPK----------ELGKLVQLSELELSHNFL 302 (667)
Q Consensus 245 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~n~~~~~~p~----------~l~~l~~L~~L~l~~n~l 302 (667)
++|++++|++++..+ ..+..+++|+.|++++|.+.+..|. .+..+++|+.|| +|.+
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i 184 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPV 184 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGG
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--Cccc
Confidence 666666666654322 3455566666666666665444433 266777777775 4444
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.7e-14 Score=133.31 Aligned_cols=131 Identities=24% Similarity=0.241 Sum_probs=64.9
Q ss_pred CCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcC
Q 042735 118 LRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLN 197 (667)
Q Consensus 118 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 197 (667)
+.++++|+.|++++|+++.. +......++|++|++++|.+.+. ..+..+++|++|++++|.+++..+.
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~--------- 82 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEG--------- 82 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSC---------
T ss_pred cCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcc---------
Confidence 44556666666666666532 33222223566666666655432 3444555555555555555433222
Q ss_pred eeeccCCcccccCCccccCCcccceeecccccccccCcc--cccCCCCCCeeeccCCcCCccchh----hhhcccCCCee
Q 042735 198 EFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS--EIGSLTKLEFLNLSTNRFSSLIPE----SLGNLLKLHYL 271 (667)
Q Consensus 198 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L 271 (667)
.|..+++|+.|++++|.+. .+|. .++.+++|+.|++++|.++.. |. .+..+++|+.|
T Consensus 83 ---------------~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 83 ---------------LDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp ---------------HHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEE
T ss_pred ---------------hhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCcccee
Confidence 2344444444444444443 2332 445555555555555555432 33 25555556666
Q ss_pred cCCCcc
Q 042735 272 DLSKYQ 277 (667)
Q Consensus 272 ~ls~n~ 277 (667)
+++.|.
T Consensus 146 d~~~n~ 151 (176)
T 1a9n_A 146 DFQKVK 151 (176)
T ss_dssp TTEECC
T ss_pred CCCcCC
Confidence 655554
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=7.4e-14 Score=130.32 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=108.0
Q ss_pred CCCCCCCCEEEccCCcCCCCcCccccCCC-CcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCC
Q 042735 166 WGKCPKLSTLNVSMNNITRSIPLEIGNLS-TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKL 244 (667)
Q Consensus 166 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 244 (667)
+..+.+|+.|++++|.++. +|. +..+. +|++|++++|.+.+. ..|..+++|+.|++++|.+++..+..++.+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4556777888888887774 343 44444 899999999988865 578899999999999999987655666999999
Q ss_pred CeeeccCCcCCccchh--hhhcccCCCeecCCCccCccccchh----hhcCCCCCEEECcCCCCC
Q 042735 245 EFLNLSTNRFSSLIPE--SLGNLLKLHYLDLSKYQFIQELPKE----LGKLVQLSELELSHNFLG 303 (667)
Q Consensus 245 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~ls~n~~~~~~p~~----l~~l~~L~~L~l~~n~l~ 303 (667)
++|+|++|.++. +|. .+..+++|+.|++++|.+. .+|.. +..+++|+.|++++|...
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999965 455 7889999999999999975 56664 899999999999999763
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=4.5e-16 Score=148.54 Aligned_cols=147 Identities=25% Similarity=0.261 Sum_probs=108.9
Q ss_pred CCCCcEEEccCCccccccch------hhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCC
Q 042735 121 CPNLVRISLEGNNMRGTISE------AFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLS 194 (667)
Q Consensus 121 l~~L~~L~L~~n~~~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 194 (667)
...++.++++.+.+++..|. .+..+++|++|++++|.+.+ +| .+..+++|+.|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555554443 77778888888888887765 55 7777888888888888887 4666677778
Q ss_pred CcCeeeccCCcccccCCccccCCcccceeecccccccccCc-ccccCCCCCCeeeccCCcCCccchh----------hhh
Q 042735 195 TLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLP-SEIGSLTKLEFLNLSTNRFSSLIPE----------SLG 263 (667)
Q Consensus 195 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~----------~~~ 263 (667)
+|++|++++|.+.+ +| .+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+.+.+|. .+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 88888888888876 34 57888889999999988875332 4678889999999999988776554 377
Q ss_pred cccCCCeec
Q 042735 264 NLLKLHYLD 272 (667)
Q Consensus 264 ~l~~L~~L~ 272 (667)
.+++|+.||
T Consensus 172 ~l~~L~~Ld 180 (198)
T 1ds9_A 172 RLPNLKKLD 180 (198)
T ss_dssp HCSSCSEEC
T ss_pred hCCCcEEEC
Confidence 888999887
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1.9e-12 Score=119.96 Aligned_cols=106 Identities=25% Similarity=0.275 Sum_probs=67.1
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
+.|++++|.+.. +|..+ .++|+.|+|++|.+++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455666665543 44433 256666666666666666666666666777777766666555555666677777777777
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCcc
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSSL 257 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 257 (667)
++.+..+..|..+++|+.|+|++|.++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 76655555566677777777777766543
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=2.8e-12 Score=119.20 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=67.0
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
+.+++++|.+. .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666553 4444432 56666666666666666666666667777777777666555555666777777777777
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCc
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 256 (667)
++.+..+..|..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7665544456667777777777777654
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.36 E-value=2.4e-12 Score=119.22 Aligned_cols=105 Identities=28% Similarity=0.291 Sum_probs=70.0
Q ss_pred CCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccC
Q 042735 172 LSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLST 251 (667)
Q Consensus 172 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 251 (667)
.+.+++++|.++. +|..+. ++|++|+|++|.+.+..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4667777777764 444442 5677777777777766666677777777777777777665555566777777777777
Q ss_pred CcCCccchhhhhcccCCCeecCCCccCc
Q 042735 252 NRFSSLIPESLGNLLKLHYLDLSKYQFI 279 (667)
Q Consensus 252 N~l~~~~p~~~~~l~~L~~L~ls~n~~~ 279 (667)
|++++..+..|..+++|+.|+|++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 7776665556666666666666666553
No 395
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.35 E-value=1.5e-12 Score=129.44 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=84.4
Q ss_pred CcCcceeecccCeEEEEEEe-CCCce--EEEEecCCCCCCc--------------------hHHhHHHHHHHHHHHHhcC
Q 042735 423 FDAKYCIGSGRHGSVYRAEL-PSKEF--LAVKKFNSPLPSD--------------------QIADQKEFFAEIEALTKIR 479 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~-~~~~~--~avk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~ 479 (667)
|+....||+|+||.||+|.. .+|+. ||||++....... .......+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999987 77888 9999865432110 0111236889999999998
Q ss_pred CCCe--eEEEEEEEeCCceEEEEEecCC-C----ChHHHhcc----------------------ccCCcccccccCCeee
Q 042735 480 HRNI--VKFYGFCSHARHSILIYEYLKR-G----SLATNLSN----------------------DAAAEELDISSKNVLL 530 (667)
Q Consensus 480 H~ni--v~~~g~~~~~~~~~lv~ey~~~-g----~L~~~l~~----------------------~~~~~~~dlk~~NiLl 530 (667)
|+++ ...+++ +..++||||+.+ | +|.+.... .....|.||||+|||+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl 204 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY 204 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence 8754 444432 357899999942 4 56554322 1122355999999999
Q ss_pred cCCCceEEecccccccc
Q 042735 531 DLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 531 d~~~~~kl~DFGla~~~ 547 (667)
+. .++|+|||+|...
T Consensus 205 ~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 205 ID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SS--SEEECCCTTCEET
T ss_pred cC--cEEEEECcccccC
Confidence 98 9999999999764
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=3.6e-12 Score=118.42 Aligned_cols=103 Identities=24% Similarity=0.307 Sum_probs=66.5
Q ss_pred CEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccCC
Q 042735 173 STLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTN 252 (667)
Q Consensus 173 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 252 (667)
+.+++++|.+. .+|..+. ++|++|+|++|.+.+..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 3454443 56777777777776666666667777777777777766554445566667777777777
Q ss_pred cCCccchhhhhcccCCCeecCCCccC
Q 042735 253 RFSSLIPESLGNLLKLHYLDLSKYQF 278 (667)
Q Consensus 253 ~l~~~~p~~~~~l~~L~~L~ls~n~~ 278 (667)
++++..+..|..+++|+.|++++|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCc
Confidence 66665555566666666666666654
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.30 E-value=1.2e-10 Score=123.31 Aligned_cols=283 Identities=12% Similarity=0.041 Sum_probs=128.0
Q ss_pred CCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEcc
Q 042735 3 TNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALE 82 (667)
Q Consensus 3 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~ 82 (667)
.+|+.+.|.. .++.+...+|.++.+|+.++|.++ +..+-..+|.++++|+.+.+..+ +.......|....+....+.
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 4555555543 255555555555666666666443 33333445555555555554433 22222223333222222211
Q ss_pred cccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCcc
Q 042735 83 NNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEI 162 (667)
Q Consensus 83 ~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 162 (667)
. .........|.++.+|+.+.+..+- ...-..+|.++++|+.+.+..+ ++......|.....|+.+.+..+.. .+
T Consensus 148 ~-~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~--~i 222 (394)
T 4fs7_A 148 E-GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY--YL 222 (394)
T ss_dssp T-TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC--EE
T ss_pred c-cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce--Ee
Confidence 1 1111223455666677777765442 3233456667777777777655 4444455666666666665554422 11
Q ss_pred CccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccc-------------
Q 042735 163 ASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQ------------- 229 (667)
Q Consensus 163 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~------------- 229 (667)
...+.....|+.+.+..+. +......+.++..|+.+.+..+.. ......|..+..++.+....+.
T Consensus 223 ~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~ 300 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLT 300 (394)
T ss_dssp CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCC
T ss_pred ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeecccccccccccc
Confidence 2222233445555443321 112223344555555555544322 1223334444444444433332
Q ss_pred -------ccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEEC
Q 042735 230 -------LIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELEL 297 (667)
Q Consensus 230 -------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l 297 (667)
+...-..+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..+ +...-..+|..+.+|+.+++
T Consensus 301 ~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 301 EVKLLDSVKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp EEEECTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 22222334444555555555422 33333444445555555555433 22222334444455555544
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.24 E-value=3.9e-13 Score=140.81 Aligned_cols=159 Identities=14% Similarity=0.147 Sum_probs=69.5
Q ss_pred CCCcEEEccCCccccccchhhhcC-----CCCCEEECcCCccCCccCccC-CCCCCCCEEEccCCcCCCCcCccc-----
Q 042735 122 PNLVRISLEGNNMRGTISEAFGIY-----LNLTFLDISDNNFFGEIASNW-GKCPKLSTLNVSMNNITRSIPLEI----- 190 (667)
Q Consensus 122 ~~L~~L~L~~n~~~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~~----- 190 (667)
++|+.|+|++|.++......+... .+|+.|+|++|.+.......+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345566666665543332222221 455555555555533221111 123345555555555543221111
Q ss_pred cCCCCcCeeeccCCccccc----CCccccCCcccceeeccccccccc----CcccccCCCCCCeeeccCCcCCcc----c
Q 042735 191 GNLSTLNEFDLSLNHIVGK----IPKEFGKLNSLTKLILRGNQLIGH----LPSEIGSLTKLEFLNLSTNRFSSL----I 258 (667)
Q Consensus 191 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 258 (667)
...++|++|+|++|.+... ++..+..+++|+.|+|++|.+... +...+...++|+.|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1234455555555554321 122233444555555555554321 223344445555555555555432 1
Q ss_pred hhhhhcccCCCeecCCCccCcc
Q 042735 259 PESLGNLLKLHYLDLSKYQFIQ 280 (667)
Q Consensus 259 p~~~~~l~~L~~L~ls~n~~~~ 280 (667)
...+...++|+.|+|++|.+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 2223333455555555555433
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=4.6e-13 Score=140.27 Aligned_cols=112 Identities=15% Similarity=0.234 Sum_probs=62.5
Q ss_pred CCCCCcEEEccCCccccc----cchhhhcCCCCCEEECcCCccCCc----cCccCCCCCCCCEEEccCCcCCCC----cC
Q 042735 120 NCPNLVRISLEGNNMRGT----ISEAFGIYLNLTFLDISDNNFFGE----IASNWGKCPKLSTLNVSMNNITRS----IP 187 (667)
Q Consensus 120 ~l~~L~~L~L~~n~~~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p 187 (667)
..++|++|+|++|.++.. ++..+...++|++|+|++|.+... ++..+...++|+.|+|++|.++.. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 345677777777766532 233445666777777777766432 234455666777777777777542 23
Q ss_pred ccccCCCCcCeeeccCCcccccCCccccCC---c--ccceee--ccccccc
Q 042735 188 LEIGNLSTLNEFDLSLNHIVGKIPKEFGKL---N--SLTKLI--LRGNQLI 231 (667)
Q Consensus 188 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l---~--~L~~L~--L~~n~l~ 231 (667)
..+...++|++|+|++|.+.+.-...+..+ . .|+.+. +..|.+.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 334456778888888887754333223222 1 155555 5555543
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.18 E-value=6.8e-10 Score=117.52 Aligned_cols=279 Identities=13% Similarity=0.064 Sum_probs=169.2
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCcccc----------------------CCCCCCeeec
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVG----------------------NLSSLRYLFL 58 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----------------------~l~~L~~L~L 58 (667)
++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +......+|. ++++|+.+.+
T Consensus 92 ~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l 169 (394)
T 4fs7_A 92 NCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSL 169 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCccccccchhhhcccCCCcEEec
Confidence 3578999999865 77777888999999998887655 2223333444 4444444444
Q ss_pred cccccceeCCCCCcc-cccCEEEcccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccc
Q 042735 59 FENNLSGSIPPSVGN-LMLTVLALENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGT 137 (667)
Q Consensus 59 ~~n~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~ 137 (667)
.++ +.......|.. ..|+.+.+..| +.......+.+...|+.+.+..+... +........+|+.+.+..+ ++..
T Consensus 170 ~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i 244 (394)
T 4fs7_A 170 PDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTEL 244 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEE
T ss_pred CCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceec
Confidence 332 11122222222 23444444333 22222233333344444333322211 1112223344555554332 2223
Q ss_pred cchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCC
Q 042735 138 ISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKL 217 (667)
Q Consensus 138 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 217 (667)
....|.....|+.+.+..+.. ......|..+..++.+.+..+.+ ....|..+.+|+.+.+..+ +..+-...|.++
T Consensus 245 ~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 245 GKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred ccccccccccceeEEcCCCcc-eeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCC
Confidence 345566667777777765532 33455677777777777666543 2345778889999998765 555556789999
Q ss_pred cccceeecccccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEE
Q 042735 218 NSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSEL 295 (667)
Q Consensus 218 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L 295 (667)
.+|+.+++..+ +...-..+|.++.+|+.+++..| ++.+...+|.++.+|+.+++..+ ...+...|..+.+|+.+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~--~~~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR--LEQYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG--GGGGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC--CEEhhheecCCCCCcEE
Confidence 99999999755 55555678999999999999876 77667788999999999999765 34455667777777654
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.16 E-value=7.6e-11 Score=122.60 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=64.1
Q ss_pred EECcCC-ccCCccCccCCCCCCCCEEEccC-CcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 151 LDISDN-NFFGEIASNWGKCPKLSTLNVSM-NNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 151 L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
++++++ .+. .+|. +..+++|+.|+|++ |.+.+..+..|.+|++|+.|+|++|++.+..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 345554 443 2454 66666666666664 6666555556666666666666666666666666666667777777777
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCc
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSS 256 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 256 (667)
+|++..+..+..++ |+.|+|.+|.+..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 66654444555444 7777777777654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=1.3e-10 Score=120.96 Aligned_cols=103 Identities=21% Similarity=0.204 Sum_probs=77.2
Q ss_pred EEEccCC-cCCCCcCccccCCCCcCeeeccC-CcccccCCccccCCcccceeecccccccccCcccccCCCCCCeeeccC
Q 042735 174 TLNVSMN-NITRSIPLEIGNLSTLNEFDLSL-NHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPSEIGSLTKLEFLNLST 251 (667)
Q Consensus 174 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 251 (667)
.++.+++ .++. +|. +..+++|+.|+|++ |.+.+..+..|++|++|+.|+|++|+|++..|..|+++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 6764 566 77888888888885 888777767788888888888888888877777788888888888888
Q ss_pred CcCCccchhhhhcccCCCeecCCCccCc
Q 042735 252 NRFSSLIPESLGNLLKLHYLDLSKYQFI 279 (667)
Q Consensus 252 N~l~~~~p~~~~~l~~L~~L~ls~n~~~ 279 (667)
|+|++..+..+..+. |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 888776655555554 777777777654
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.09 E-value=6.9e-09 Score=109.75 Aligned_cols=285 Identities=10% Similarity=0.119 Sum_probs=130.7
Q ss_pred CcEEeccCCcCcCCCCccccCCCCCCEEEccCcc---ccccCCccccCCCCCCeeeccccccceeCCCCCcc-cccCEEE
Q 042735 5 LRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQ---FRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGN-LMLTVLA 80 (667)
Q Consensus 5 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~ 80 (667)
|+.+.+..+ ++.+...+|.++.+|+.+.+..|. +..+-..+|.++.+|+.+.+..+ ++......|.. ..|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 555555543 555556666666666666665553 44334455666666666655433 33222233333 3455555
Q ss_pred cccccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFG 160 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 160 (667)
+..+ +.......+.....|+.+.+..+ +...-..+|. ..+|+.+.+..+-. .....+|....++.......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCccc-ccccchhhhccccceeccccccccc
Confidence 5432 22233334444455555555432 2212222232 23455555443321 1233344444444444332221110
Q ss_pred ccC-------------ccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccc
Q 042735 161 EIA-------------SNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRG 227 (667)
Q Consensus 161 ~~~-------------~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 227 (667)
.-- ..+.....+..+.+..+ +...-...|.++..|+.+.+..+.. ..-...|.++.+|+.+.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~~ 297 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFSS 297 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECCT
T ss_pred ccceeecccccccccccccccccccceEEcCCc-ceEcccceeeecccccEEecccccc-eecCcccccccccccccCCC
Confidence 000 00001112222222111 1111223455666666666654322 23344566666666666643
Q ss_pred ccccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 228 NQLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 228 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
.+.......|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ +...-..+|..+.+|+.+++.++
T Consensus 298 -~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 298 -RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp -TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred -cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 233333445666666666666543 44444556666666666666543 23223345666666666666655
No 404
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.00 E-value=2.9e-11 Score=125.11 Aligned_cols=122 Identities=10% Similarity=0.041 Sum_probs=80.7
Q ss_pred CcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCC-------------chHH-----hHHHHHHHHHHHHhcCCCCee
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPS-------------DQIA-----DQKEFFAEIEALTKIRHRNIV 484 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~-------------~~~~-----~~~~~~~E~~~l~~l~H~niv 484 (667)
|++...||+|+||.||+|...+|+.||||+++..... .... .+....+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7788899999999999999989999999987532110 0000 011123567777777554442
Q ss_pred EEEEEEEeCCceEEEEEecCCCChHHHhccc------------------cCCcccccccCCeeecCCC----------ce
Q 042735 485 KFYGFCSHARHSILIYEYLKRGSLATNLSND------------------AAAEELDISSKNVLLDLEH----------KA 536 (667)
Q Consensus 485 ~~~g~~~~~~~~~lv~ey~~~g~L~~~l~~~------------------~~~~~~dlk~~NiLld~~~----------~~ 536 (667)
...-+.. ...++||||++++.|.+..... ....|.||||.|||+++++ .+
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~ 254 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTP 254 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccce
Confidence 2111111 2347999999998886543221 1223559999999998877 38
Q ss_pred EEeccccccc
Q 042735 537 HVSDFGIAKF 546 (667)
Q Consensus 537 kl~DFGla~~ 546 (667)
.|+||+-+-.
T Consensus 255 ~iID~~Q~V~ 264 (397)
T 4gyi_A 255 IIIXFPQMVS 264 (397)
T ss_dssp EECCCTTCEE
T ss_pred EEEEeCCccc
Confidence 8999997654
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.99 E-value=2.7e-08 Score=105.13 Aligned_cols=276 Identities=13% Similarity=0.115 Sum_probs=188.0
Q ss_pred CcCCCCccccCCC-CCCEEEccCccccccCCccccCCCCCCeeeccccc---cceeCCCCCcc-cccCEEEccccccccc
Q 042735 15 LTGLIPTETWNLK-SLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENN---LSGSIPPSVGN-LMLTVLALENNHFTGN 89 (667)
Q Consensus 15 l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~-~~L~~L~L~~n~l~~~ 89 (667)
++.+...+|.+++ .|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++..-...|.. ..|+.+.+.++ +...
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4455667788885 5999999765 666777899999999999998764 54333445554 45776666544 4444
Q ss_pred CCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccccchhhhcCCCCCEEECcCCccCCccCccCCCC
Q 042735 90 LRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKC 169 (667)
Q Consensus 90 ~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 169 (667)
....+....+|+.+.+..+ +...-..++..+.+|+.+.+..+ ++.....+|.. .+|+.+.+..+- ...-..+|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhc
Confidence 4566777888998888643 34344567888899999988765 44455556654 578888876542 23445678888
Q ss_pred CCCCEEEccCCcCCCCcCccc-------------cCCCCcCeeeccCCcccccCCccccCCcccceeecccccccccCcc
Q 042735 170 PKLSTLNVSMNNITRSIPLEI-------------GNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLIGHLPS 236 (667)
Q Consensus 170 ~~L~~L~L~~n~l~~~~p~~~-------------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 236 (667)
..+.......+.........+ .....+..+.+.. .+...-...|.++.+|+.+.+..+.. ..-..
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~ 282 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV-SIGTG 282 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC-EECTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccc-eecCc
Confidence 888888766554432111111 1122333344432 23333456788999999999976643 34556
Q ss_pred cccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 237 EIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 237 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
.|.++++|+.+.+. +.++.+...+|.++.+|+.+++..+ +...-..+|..+.+|+.+.+..+
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 78899999999996 5566666778999999999999865 34444568889999999999654
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=6.7e-10 Score=115.27 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=41.5
Q ss_pred CCCCCCCcEEEccCCcc---------ccccchhhhcCCCCCEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCc
Q 042735 118 LRNCPNLVRISLEGNNM---------RGTISEAFGIYLNLTFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPL 188 (667)
Q Consensus 118 l~~l~~L~~L~L~~n~~---------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 188 (667)
+..+++|+.|.+..+.. .+.+...+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHH
Confidence 33456666666644321 1123344566667777777665211 1222 22 56677777766655432222
Q ss_pred ccc--CCCCcCeeecc
Q 042735 189 EIG--NLSTLNEFDLS 202 (667)
Q Consensus 189 ~~~--~l~~L~~L~L~ 202 (667)
.+. .+++|+.|+|+
T Consensus 212 ~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHSBCTTCCEEEEE
T ss_pred HHHHccCCCCcEEEEe
Confidence 222 46666666664
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.88 E-value=2.1e-07 Score=97.72 Aligned_cols=285 Identities=12% Similarity=0.059 Sum_probs=177.7
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEEccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLALEN 83 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~L~~ 83 (667)
+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ +.......|....|+.+.+.+
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~~L~~i~lp~ 122 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGTDLDDFEFPG 122 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTCCCSEEECCT
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccCCcccccCCC
Confidence 456666654 366667778888888888888655 555556677766 5777766543 443334445555688887765
Q ss_pred ccccccCCccccCCCCccEEEeeCcccccccCccCCCCCCCcEEEccCCccccc------------cchhhhcCCCCCEE
Q 042735 84 NHFTGNLRHNICRNGALERVIVGGNHFRGPIPKCLRNCPNLVRISLEGNNMRGT------------ISEAFGIYLNLTFL 151 (667)
Q Consensus 84 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~------------~~~~~~~l~~L~~L 151 (667)
+- .......+ ...+++.+.+..+ ++..-..++..+.+++...+..+..... ....+.....+..+
T Consensus 123 ~~-~~i~~~~F-~~~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 4h09_A 123 AT-TEIGNYIF-YNSSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEF 199 (379)
T ss_dssp TC-CEECTTTT-TTCCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEE
T ss_pred cc-cccccccc-ccceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccc
Confidence 53 21222222 3345665555432 3334445677778888777665443211 11223333444555
Q ss_pred ECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeeccccccc
Q 042735 152 DISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGNQLI 231 (667)
Q Consensus 152 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 231 (667)
.+..+. .......+..+.+|+.+.+..+ +.......+.++..|+.+.+..+ +...-...|.++.+|+.+.+..+ +.
T Consensus 200 ~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~ 275 (379)
T 4h09_A 200 TIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK 275 (379)
T ss_dssp ECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS
T ss_pred ccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce
Confidence 443321 1233445667778888887655 33344556778888888888765 44445567888888888888654 44
Q ss_pred ccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcCCCCCEEECcCC
Q 042735 232 GHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKLVQLSELELSHN 300 (667)
Q Consensus 232 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~l~~n 300 (667)
......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.+..+ +...-..+|..+.+|+.+.+..+
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 344557788888998888888887777778888888888888754 33333457788888888777543
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=3.4e-09 Score=109.92 Aligned_cols=163 Identities=18% Similarity=0.210 Sum_probs=112.3
Q ss_pred hhhhcCCCCCEEECcCCccC---------CccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccC
Q 042735 140 EAFGIYLNLTFLDISDNNFF---------GEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKI 210 (667)
Q Consensus 140 ~~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 210 (667)
.+...+++|+.|.+.++... +.+...+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+....
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 34567889999998765321 123344567899999999988422 2333 43 789999999988765433
Q ss_pred Ccccc--CCcccceeeccc--cccccc-----Ccccc--cCCCCCCeeeccCCcCCccchhhhh---cccCCCeecCCCc
Q 042735 211 PKEFG--KLNSLTKLILRG--NQLIGH-----LPSEI--GSLTKLEFLNLSTNRFSSLIPESLG---NLLKLHYLDLSKY 276 (667)
Q Consensus 211 p~~~~--~l~~L~~L~L~~--n~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~ls~n 276 (667)
...+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|.+|.+....+..+. .+++|+.|+|+.|
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 33343 689999999863 221111 11222 3579999999999998754444443 4789999999999
Q ss_pred cCccc----cchhhhcCCCCCEEECcCCCCCCc
Q 042735 277 QFIQE----LPKELGKLVQLSELELSHNFLGRE 305 (667)
Q Consensus 277 ~~~~~----~p~~l~~l~~L~~L~l~~n~l~~~ 305 (667)
.+... ++..+..+++|+.|++++|.++..
T Consensus 290 ~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 290 VLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp CCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 87653 444556789999999999988643
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.73 E-value=9.5e-07 Score=92.66 Aligned_cols=277 Identities=11% Similarity=0.028 Sum_probs=190.3
Q ss_pred CCCCCcEEeccCCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccceeCCCCCcccccCEEE
Q 042735 1 NLTNLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLSGSIPPSVGNLMLTVLA 80 (667)
Q Consensus 1 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~ 80 (667)
++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ +..+...+|.+ .+|+.+.+..+ +.......|....|....
T Consensus 67 ~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~~l~~~~ 141 (379)
T 4h09_A 67 SCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNSSVKRIV 141 (379)
T ss_dssp TCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTCCCCEEE
T ss_pred CCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccceeeeee
Confidence 3578999999765 888888889888 6888887655 55445556655 48999999765 333334455555666666
Q ss_pred cccccccccCCccccCCCCccEEEeeCccccc------------ccCccCCCCCCCcEEEccCCccccccchhhhcCCCC
Q 042735 81 LENNHFTGNLRHNICRNGALERVIVGGNHFRG------------PIPKCLRNCPNLVRISLEGNNMRGTISEAFGIYLNL 148 (667)
Q Consensus 81 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~------------~~p~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 148 (667)
+..+ ++......+....+++...+..+.... .....+.....+..+.+..+. .......+....+|
T Consensus 142 ~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l 219 (379)
T 4h09_A 142 IPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNL 219 (379)
T ss_dssp ECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSC
T ss_pred ccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeeccccccccc
Confidence 5543 333444556666777777665433211 112334455666666665443 23455677788889
Q ss_pred CEEECcCCccCCccCccCCCCCCCCEEEccCCcCCCCcCccccCCCCcCeeeccCCcccccCCccccCCcccceeecccc
Q 042735 149 TFLDISDNNFFGEIASNWGKCPKLSTLNVSMNNITRSIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLNSLTKLILRGN 228 (667)
Q Consensus 149 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 228 (667)
+.+.+..+ +......+|..+..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.++.+|+.+.+.++
T Consensus 220 ~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~ 296 (379)
T 4h09_A 220 KKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNS 296 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCT
T ss_pred ceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccc
Confidence 99888655 33344567888999999999776 54455567888999999998754 44455567899999999999988
Q ss_pred cccccCcccccCCCCCCeeeccCCcCCccchhhhhcccCCCeecCCCccCccccchhhhcC
Q 042735 229 QLIGHLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLLKLHYLDLSKYQFIQELPKELGKL 289 (667)
Q Consensus 229 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l 289 (667)
.+...-..+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ +...-..+|..+
T Consensus 297 ~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 297 AIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 887666778999999999999754 66666778999999999988654 332223445444
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=5.4e-08 Score=95.72 Aligned_cols=79 Identities=25% Similarity=0.300 Sum_probs=38.4
Q ss_pred CCcccceeecccccccc--cCcccccCCCCCCeeeccCCcCCccchhhhhccc--CCCeecCCCccCccccc-------h
Q 042735 216 KLNSLTKLILRGNQLIG--HLPSEIGSLTKLEFLNLSTNRFSSLIPESLGNLL--KLHYLDLSKYQFIQELP-------K 284 (667)
Q Consensus 216 ~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~ls~n~~~~~~p-------~ 284 (667)
++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+.+.+| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555554 2334444555555555555555543 2222222 55555555555544333 1
Q ss_pred hhhcCCCCCEEE
Q 042735 285 ELGKLVQLSELE 296 (667)
Q Consensus 285 ~l~~l~~L~~L~ 296 (667)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 244555555544
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.34 E-value=5.7e-07 Score=88.79 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=59.5
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC--eeEEEEEEEeCCceEEE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN--IVKFYGFCSHARHSILI 499 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~~~g~~~~~~~~~lv 499 (667)
++....+.+.|..+.||++...++..+++|...... ...+.+|+++++.+.+.+ +.+++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 344333334566799999988778889999865421 124678999999887544 45688988888889999
Q ss_pred EEecCCCChH
Q 042735 500 YEYLKRGSLA 509 (667)
Q Consensus 500 ~ey~~~g~L~ 509 (667)
|||++|.++.
T Consensus 94 ~e~i~G~~l~ 103 (264)
T 1nd4_A 94 LGEVPGQDLL 103 (264)
T ss_dssp EECCSSEETT
T ss_pred EEecCCcccC
Confidence 9999998774
No 412
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.33 E-value=1.3e-06 Score=86.36 Aligned_cols=90 Identities=14% Similarity=0.075 Sum_probs=70.1
Q ss_pred HHHHHcCCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCC
Q 042735 416 IIRAINDFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHAR 494 (667)
Q Consensus 416 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~ 494 (667)
+...+++|......+.|+.+.||++... ++.+++|........ ....+.+|+++++.+. |..+.++++++.+.+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~ 83 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC
Confidence 3455677887788888899999999864 577999987532111 1124788999999885 677889999999988
Q ss_pred ceEEEEEecCCCChHH
Q 042735 495 HSILIYEYLKRGSLAT 510 (667)
Q Consensus 495 ~~~lv~ey~~~g~L~~ 510 (667)
..|+||||++|.++.+
T Consensus 84 ~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSE 99 (263)
T ss_dssp EEEEEEECCSSEEHHH
T ss_pred ceEEEEEecCCeehhh
Confidence 9999999999988865
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.21 E-value=3.8e-07 Score=85.19 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=36.3
Q ss_pred ccCCCCCCeeeccCCcCCcc----chhhhhcccCCCeecC--CCccCccc----cchhhhcCCCCCEEECcCCCC
Q 042735 238 IGSLTKLEFLNLSTNRFSSL----IPESLGNLLKLHYLDL--SKYQFIQE----LPKELGKLVQLSELELSHNFL 302 (667)
Q Consensus 238 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l--s~n~~~~~----~p~~l~~l~~L~~L~l~~n~l 302 (667)
+...++|++|+|++|.+... +...+...+.|+.|+| ++|.+... +...+...+.|++|++++|.+
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 33445566666666665432 2334444556666666 55555432 233445556777787777765
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=1.8e-07 Score=91.95 Aligned_cols=78 Identities=28% Similarity=0.391 Sum_probs=37.8
Q ss_pred CCCCCEEEccCCcCCC--CcCccccCCCCcCeeeccCCcccccCCccccCCc--ccceeecccccccccCcc-------c
Q 042735 169 CPKLSTLNVSMNNITR--SIPLEIGNLSTLNEFDLSLNHIVGKIPKEFGKLN--SLTKLILRGNQLIGHLPS-------E 237 (667)
Q Consensus 169 l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~-------~ 237 (667)
+++|+.|+|++|++++ .+|..+..+++|+.|+|++|.+.+. ..+..+. +|+.|+|++|.+.+.+|. .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 3444444444444443 2233344455555555555555432 1222222 566666666666554442 2
Q ss_pred ccCCCCCCeee
Q 042735 238 IGSLTKLEFLN 248 (667)
Q Consensus 238 ~~~l~~L~~L~ 248 (667)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 45666776664
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.15 E-value=6e-07 Score=83.80 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=18.4
Q ss_pred ccCCCCcCeeec--cCCccccc----CCccccCCcccceeecccccc
Q 042735 190 IGNLSTLNEFDL--SLNHIVGK----IPKEFGKLNSLTKLILRGNQL 230 (667)
Q Consensus 190 ~~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l 230 (667)
+...++|++|+| ++|.+... +...+...++|+.|+|++|.+
T Consensus 117 L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 117 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 334444555555 44444322 112233334555555555554
No 416
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.73 E-value=6.3e-05 Score=78.00 Aligned_cols=79 Identities=11% Similarity=0.265 Sum_probs=55.9
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecC--CCCCCchHHhHHHHHHHHHHHHhcC--CCCeeEEEEEEEeC---CceEE
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFN--SPLPSDQIADQKEFFAEIEALTKIR--HRNIVKFYGFCSHA---RHSIL 498 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~~~g~~~~~---~~~~l 498 (667)
.+.++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.+. +..+.++++++.+. +..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 4568899999999998765 567788765 2111 112345788999999887 45688999998776 45899
Q ss_pred EEEecCCCCh
Q 042735 499 IYEYLKRGSL 508 (667)
Q Consensus 499 v~ey~~~g~L 508 (667)
||||++|..+
T Consensus 119 vme~v~G~~l 128 (359)
T 3dxp_A 119 IMEFVSGRVL 128 (359)
T ss_dssp EEECCCCBCC
T ss_pred EEEecCCeec
Confidence 9999998876
No 417
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.61 E-value=4.9e-05 Score=76.83 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=50.2
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCC--eeEEEEEEEeCC---ceEEE
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRN--IVKFYGFCSHAR---HSILI 499 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~~~g~~~~~~---~~~lv 499 (667)
.+.++.|....||++. ..+++|.... ......+.+|+++++.+. +.. +.+.+++..... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3568999999999874 4578887532 123456889999998884 322 344555443333 45899
Q ss_pred EEecCCCChH
Q 042735 500 YEYLKRGSLA 509 (667)
Q Consensus 500 ~ey~~~g~L~ 509 (667)
|||++|..+.
T Consensus 95 m~~i~G~~l~ 104 (304)
T 3sg8_A 95 FTKIKGVPLT 104 (304)
T ss_dssp EECCCCEECC
T ss_pred EcccCCeECC
Confidence 9999988764
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.54 E-value=0.00028 Score=71.77 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=53.3
Q ss_pred CCcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC----CCeeEEEEEEEeCCceE
Q 042735 422 DFDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH----RNIVKFYGFCSHARHSI 497 (667)
Q Consensus 422 ~f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~~~g~~~~~~~~~ 497 (667)
.....+.++.|..+.||+. +..+++|.... ......+.+|++++..+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 4555667999999999998 56688887532 1223458899999988876 223444444 5678
Q ss_pred EEEEecCCCChH
Q 042735 498 LIYEYLKRGSLA 509 (667)
Q Consensus 498 lv~ey~~~g~L~ 509 (667)
+||||++|.++.
T Consensus 104 lvme~i~G~~l~ 115 (320)
T 3r70_A 104 NIMKYIKGERIT 115 (320)
T ss_dssp EEEECCCCBCCC
T ss_pred EEEeecCCcccc
Confidence 999999998875
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.52 E-value=4.8e-05 Score=69.25 Aligned_cols=64 Identities=11% Similarity=0.007 Sum_probs=31.6
Q ss_pred cCCCCCCCcEEEccCCc-cccccchhhhcC----CCCCEEECcCCc-cCCccCccCCCCCCCCEEEccCC
Q 042735 117 CLRNCPNLVRISLEGNN-MRGTISEAFGIY----LNLTFLDISDNN-FFGEIASNWGKCPKLSTLNVSMN 180 (667)
Q Consensus 117 ~l~~l~~L~~L~L~~n~-~~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n 180 (667)
.+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+..+++|+.|+|++|
T Consensus 80 ~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 80 HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 34566666667666664 443322333332 246666666653 43222223344555555555554
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.50 E-value=7.4e-05 Score=68.03 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=43.3
Q ss_pred ccceeecccccccccCcccccCCCCCCeeeccCCc-CCccchhhhhcc----cCCCeecCCCcc-CccccchhhhcCCCC
Q 042735 219 SLTKLILRGNQLIGHLPSEIGSLTKLEFLNLSTNR-FSSLIPESLGNL----LKLHYLDLSKYQ-FIQELPKELGKLVQL 292 (667)
Q Consensus 219 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~ls~n~-~~~~~p~~l~~l~~L 292 (667)
+|+.|+++++.++..--..+.++++|+.|+|++|. ++..--..+..+ ++|+.|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443323344556666666666653 443222233332 256666666654 333323345566777
Q ss_pred CEEECcCCC
Q 042735 293 SELELSHNF 301 (667)
Q Consensus 293 ~~L~l~~n~ 301 (667)
++|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777664
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.10 E-value=0.0027 Score=62.56 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=55.2
Q ss_pred eeecccCe-EEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceEEEEEecC
Q 042735 428 CIGSGRHG-SVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 428 ~lg~g~~g-~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~lv~ey~~ 504 (667)
.+..|..| .||+..... +..+.+|+-.. .....+.+|++.|+.+. +--+-++++++.+++..++||||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 45556665 689887654 55688887432 22346888999998875 3336678889999999999999999
Q ss_pred CCChHH
Q 042735 505 RGSLAT 510 (667)
Q Consensus 505 ~g~L~~ 510 (667)
|.++.+
T Consensus 104 G~~~~~ 109 (272)
T 4gkh_A 104 GKTAFQ 109 (272)
T ss_dssp SEEHHH
T ss_pred Cccccc
Confidence 887643
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.86 E-value=0.0033 Score=62.63 Aligned_cols=76 Identities=24% Similarity=0.228 Sum_probs=59.4
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCC---CeeEEEEEEEeCCceEEEEE
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHR---NIVKFYGFCSHARHSILIYE 501 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~~~g~~~~~~~~~lv~e 501 (667)
..+.+|.|.++.||+++..+|..++||+...... .....|.+|++.|+.++|. .+.+++++. ..++|||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 3567999999999999998899999998643211 1123588999999999875 577888764 4689999
Q ss_pred ecCCCCh
Q 042735 502 YLKRGSL 508 (667)
Q Consensus 502 y~~~g~L 508 (667)
|++++.+
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999875
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.76 E-value=0.00071 Score=62.75 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=18.1
Q ss_pred CCCCEEEccCc-cccc----cCCccccCCCCCCeeeccccccc
Q 042735 27 KSLVKLGLGGN-QFRG----SLPSSVGNLSSLRYLFLFENNLS 64 (667)
Q Consensus 27 ~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~L~~n~l~ 64 (667)
+.|+.|+|++| +|.. .+-+++..-+.|+.|+|++|+|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 44555555553 4432 12233444445555555555554
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.54 E-value=0.0038 Score=53.90 Aligned_cols=57 Identities=25% Similarity=0.216 Sum_probs=43.9
Q ss_pred cEEeccCCcCc-CCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeeccccccc
Q 042735 6 RELHLRDNYLT-GLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFENNLS 64 (667)
Q Consensus 6 ~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 64 (667)
..++.+++.++ ..+|..+ -.+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888887 2356543 247899999999998777778888999999999988663
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.24 E-value=0.002 Score=59.73 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=43.7
Q ss_pred Ccccceeecccccccc----cCcccccCCCCCCeeeccCCcCCccc----hhhhhcccCCCeecCCCccC--cc-----c
Q 042735 217 LNSLTKLILRGNQLIG----HLPSEIGSLTKLEFLNLSTNRFSSLI----PESLGNLLKLHYLDLSKYQF--IQ-----E 281 (667)
Q Consensus 217 l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~ls~n~~--~~-----~ 281 (667)
-+.|+.|+|++|.+.. .+-..+..-+.|+.|+|++|.|...- -+.+..-..|+.|+|++|.. .+ .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 3445555555555432 12223334456666777766665331 22233334567777764321 11 2
Q ss_pred cchhhhcCCCCCEEECcCCCC
Q 042735 282 LPKELGKLVQLSELELSHNFL 302 (667)
Q Consensus 282 ~p~~l~~l~~L~~L~l~~n~l 302 (667)
+-..+..-+.|..|+++.|.+
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCCcCeEeccCCCc
Confidence 334455566777888776654
No 426
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=95.87 E-value=0.043 Score=54.97 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=53.0
Q ss_pred ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCC---CeeEEEEEEE-eCCceEEEEEe
Q 042735 427 YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHR---NIVKFYGFCS-HARHSILIYEY 502 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~~~g~~~-~~~~~~lv~ey 502 (667)
+.++.|....||+. +..+++|.... ......+.+|++++..+.+. .+.+.++++. ..+..++||||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 45788888999998 46688887421 12345688999999999753 2456666664 34567899999
Q ss_pred cCCCChHH
Q 042735 503 LKRGSLAT 510 (667)
Q Consensus 503 ~~~g~L~~ 510 (667)
++|..+.+
T Consensus 95 i~G~~l~~ 102 (306)
T 3tdw_A 95 VQGQILGE 102 (306)
T ss_dssp CCSEECHH
T ss_pred cCCeECch
Confidence 99877643
No 427
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.74 E-value=0.054 Score=55.73 Aligned_cols=74 Identities=7% Similarity=0.096 Sum_probs=54.0
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC--eeEEEEEEEeC-CceEEEEE
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN--IVKFYGFCSHA-RHSILIYE 501 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~~~g~~~~~-~~~~lv~e 501 (667)
..+.++.|....+|+... ++..+++|..... ..+.+|+.++..+.... +.++++++... +..|+|||
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 345688999999999986 4677888876421 14778999998887433 45667776654 56899999
Q ss_pred ecCCCCh
Q 042735 502 YLKRGSL 508 (667)
Q Consensus 502 y~~~g~L 508 (667)
|++|..+
T Consensus 115 ~l~G~~l 121 (362)
T 3ovc_A 115 RAQGVTL 121 (362)
T ss_dssp CCCSEET
T ss_pred ecCCCCc
Confidence 9997654
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.25 E-value=0.015 Score=50.00 Aligned_cols=37 Identities=38% Similarity=0.406 Sum_probs=34.7
Q ss_pred CCcEEeccCCcCcCCCCccccCCCCCCEEEccCcccc
Q 042735 4 NLRELHLRDNYLTGLIPTETWNLKSLVKLGLGGNQFR 40 (667)
Q Consensus 4 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 40 (667)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 7999999999999988888999999999999999875
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=92.71 E-value=0.28 Score=49.12 Aligned_cols=75 Identities=23% Similarity=0.246 Sum_probs=58.2
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC---CCCeeEEEEEEEeCCceEEEEEe
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR---HRNIVKFYGFCSHARHSILIYEY 502 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~g~~~~~~~~~lv~ey 502 (667)
.+.|+.|....+|+.... +..+++|.... .....|.+|++.|+.+. ...+.+.++++...+..++||||
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~-------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINER-------SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEG-------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCc-------ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 346899999999999864 56688887542 12346888999888774 35688888888888889999999
Q ss_pred cCCCCh
Q 042735 503 LKRGSL 508 (667)
Q Consensus 503 ~~~g~L 508 (667)
+++..+
T Consensus 113 l~G~~~ 118 (312)
T 3jr1_A 113 LNKSKN 118 (312)
T ss_dssp CCCCCC
T ss_pred ccCCCC
Confidence 999865
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=92.62 E-value=0.23 Score=49.05 Aligned_cols=78 Identities=22% Similarity=0.216 Sum_probs=54.6
Q ss_pred CcCcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCC---CCeeEEEEEEEeCCceEEE
Q 042735 423 FDAKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRH---RNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 423 f~~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~~~g~~~~~~~~~lv 499 (667)
....+.+|.|..+.||+.+..+|+.+.||+....... ....|.+|++.|+.+.- --+.+.+++. ..++|
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv 88 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc----hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence 3445668999999999999999999999986543221 12347789998887742 1244555542 34789
Q ss_pred EEecCCCCh
Q 042735 500 YEYLKRGSL 508 (667)
Q Consensus 500 ~ey~~~g~L 508 (667)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999988754
No 431
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=92.03 E-value=0.44 Score=48.05 Aligned_cols=72 Identities=17% Similarity=0.332 Sum_probs=39.4
Q ss_pred eeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhc-----CCCCeeEEE-E--EEEeCCceEEE
Q 042735 428 CIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKI-----RHRNIVKFY-G--FCSHARHSILI 499 (667)
Q Consensus 428 ~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~~~-g--~~~~~~~~~lv 499 (667)
.++.|..+.||+....++. +++|+.... . .....|++++..+ ..|.++... | +....+..++|
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~-----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRP-----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSC-----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCC-----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 3566778999999876554 888887541 1 1222344444333 235555410 1 12345678899
Q ss_pred EEecCCCCh
Q 042735 500 YEYLKRGSL 508 (667)
Q Consensus 500 ~ey~~~g~L 508 (667)
|||++|..+
T Consensus 110 ~~~i~G~~~ 118 (346)
T 2q83_A 110 YDWIEGRPF 118 (346)
T ss_dssp EECCCCBCC
T ss_pred EEeecCccC
Confidence 999998643
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=91.61 E-value=0.48 Score=49.57 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=44.7
Q ss_pred cceeecccCeEEEEEEeCCCceEEEEecCCCCC---Cc-h-HHhHHHHHHHHHHHH-hcCCCCeeEEEEEEEeCCceEEE
Q 042735 426 KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLP---SD-Q-IADQKEFFAEIEALT-KIRHRNIVKFYGFCSHARHSILI 499 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~---~~-~-~~~~~~~~~E~~~l~-~l~H~niv~~~g~~~~~~~~~lv 499 (667)
.+.+|.|..+.||++.. ++..++||....... .. . ......+..|+..+. ...+..+.+++++. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 34689999999999965 456788994321110 00 0 001223444443322 22334566777665 5677999
Q ss_pred EEec-CC
Q 042735 500 YEYL-KR 505 (667)
Q Consensus 500 ~ey~-~~ 505 (667)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 433
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=89.85 E-value=0.3 Score=50.70 Aligned_cols=79 Identities=14% Similarity=0.071 Sum_probs=48.5
Q ss_pred cceeecccCeEEEEEEeC-CCceEEEEecCCCCC-Cch--HHhHHHHHHHHHHHHhcCC--CC-eeEEEEEEEeCCceEE
Q 042735 426 KYCIGSGRHGSVYRAELP-SKEFLAVKKFNSPLP-SDQ--IADQKEFFAEIEALTKIRH--RN-IVKFYGFCSHARHSIL 498 (667)
Q Consensus 426 ~~~lg~g~~g~vy~~~~~-~~~~~avk~~~~~~~-~~~--~~~~~~~~~E~~~l~~l~H--~n-iv~~~g~~~~~~~~~l 498 (667)
.+.+|.|.++.||++... ++..++||....... ... ......+.+|++++..+.+ |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 346899999999999754 457799997643211 000 0112346778888887742 33 3455544 4556789
Q ss_pred EEEecCCC
Q 042735 499 IYEYLKRG 506 (667)
Q Consensus 499 v~ey~~~g 506 (667)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999863
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=88.08 E-value=3.3 Score=41.09 Aligned_cols=91 Identities=9% Similarity=0.092 Sum_probs=51.5
Q ss_pred CcCHHHHHHHHcCCcCc-----ceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-----
Q 042735 410 KFDYVEIIRAINDFDAK-----YCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR----- 479 (667)
Q Consensus 410 ~~~~~~~~~~~~~f~~~-----~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~----- 479 (667)
.++.+++......|... +.|+.|....+|+....++ .+++|....... ...+..|++++..+.
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~------~~~l~~e~~~l~~L~~~g~~ 78 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE------KNDLPFFLGLMQHLAAKGLS 78 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC------HHHHHHHHHHHHHHHHCCCC
Confidence 35666777777767652 2366788889999987666 577888764211 123445666666553
Q ss_pred CCCeeEEE-E--EEEeCCceEEEEEecCCCC
Q 042735 480 HRNIVKFY-G--FCSHARHSILIYEYLKRGS 507 (667)
Q Consensus 480 H~niv~~~-g--~~~~~~~~~lv~ey~~~g~ 507 (667)
-|.++... | +....+..+++|||++|..
T Consensus 79 vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~ 109 (322)
T 2ppq_A 79 CPLPLPRKDGELLGELSGRPAALISFLEGMW 109 (322)
T ss_dssp CCCBCCBTTCCSCEEETTEEEEEEECCCCBC
T ss_pred CCcccCCCCCCEEEEECCEEEEEEEeCCCcC
Confidence 23333210 1 1122356789999999864
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=87.33 E-value=0.57 Score=48.22 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=43.3
Q ss_pred ceeecccCeEEEEEEeCC--------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceE
Q 042735 427 YCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~ 497 (667)
+.+..|....+|++...+ +..+.+|+..... .....+.+|.++++.+. +.-..++++++.+ .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 346668888899998753 4568888753211 12234668998887775 3334566776643 2
Q ss_pred EEEEecCCCCh
Q 042735 498 LIYEYLKRGSL 508 (667)
Q Consensus 498 lv~ey~~~g~L 508 (667)
+||||++|..+
T Consensus 127 ~v~e~i~G~~l 137 (379)
T 3feg_A 127 RLEQYIPSRPL 137 (379)
T ss_dssp EEEECCSEEEC
T ss_pred cEEEEecCccC
Confidence 89999997654
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=85.12 E-value=0.91 Score=44.91 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=42.4
Q ss_pred CcceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCe-eEEEEEEEeCCceEEEEEec
Q 042735 425 AKYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNI-VKFYGFCSHARHSILIYEYL 503 (667)
Q Consensus 425 ~~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~~~g~~~~~~~~~lv~ey~ 503 (667)
..+.|+.|....+|+. ..+.+|......... ....+|+++++.+....+ .+++++ +.+.-++|+||+
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i 89 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYI 89 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECC
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeec
Confidence 3567899999999999 457888765421110 012357766665542122 355544 344467899999
Q ss_pred -CCCCh
Q 042735 504 -KRGSL 508 (667)
Q Consensus 504 -~~g~L 508 (667)
++.++
T Consensus 90 ~~g~~l 95 (301)
T 3dxq_A 90 AGAQTM 95 (301)
T ss_dssp TTCEEC
T ss_pred CCCccC
Confidence 55433
No 437
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.11 E-value=0.16 Score=54.07 Aligned_cols=57 Identities=7% Similarity=-0.092 Sum_probs=15.0
Q ss_pred CeEEEEEEeCC-CceEEE------EecCCCCCCchHHhHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 042735 434 HGSVYRAELPS-KEFLAV------KKFNSPLPSDQIADQKEFFAEIEALTKIRHRNIVKFYGFCSH 492 (667)
Q Consensus 434 ~g~vy~~~~~~-~~~~av------k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~g~~~~ 492 (667)
||.||+|.+.. ...||| |....... .......|.+|+.++...+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~--~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGV--SEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccc--cccccccccccccccccccccccCCCcceEEe
Confidence 99999998854 357888 65443211 12223568999999999999999999888754
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=79.89 E-value=2.1 Score=42.89 Aligned_cols=26 Identities=35% Similarity=0.342 Sum_probs=22.4
Q ss_pred ccccCCeeecCC----CceEEecccccccc
Q 042735 522 DISSKNVLLDLE----HKAHVSDFGIAKFL 547 (667)
Q Consensus 522 dlk~~NiLld~~----~~~kl~DFGla~~~ 547 (667)
|+.+.||+++.+ +.+.|.||+.+..-
T Consensus 189 D~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 189 DFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 999999999874 67899999988753
No 439
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=77.04 E-value=2.4 Score=42.89 Aligned_cols=81 Identities=5% Similarity=0.021 Sum_probs=51.7
Q ss_pred cee-ecccCeEEEEEEeC-------CCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-C--CCeeEEEEEEEeC--
Q 042735 427 YCI-GSGRHGSVYRAELP-------SKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-H--RNIVKFYGFCSHA-- 493 (667)
Q Consensus 427 ~~l-g~g~~g~vy~~~~~-------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~niv~~~g~~~~~-- 493 (667)
+.| +.|..+.+|+.... ++..+++|........ .......+.+|+++++.+. | -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 456 78889999998764 2556788875431100 0000123667888887775 3 3467788887665
Q ss_pred -CceEEEEEecCCCCh
Q 042735 494 -RHSILIYEYLKRGSL 508 (667)
Q Consensus 494 -~~~~lv~ey~~~g~L 508 (667)
+..++||||++|..+
T Consensus 105 ~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVP 120 (357)
T ss_dssp TSSCEEEEECCCCBCC
T ss_pred cCCceEEEEecCCCCh
Confidence 357899999998654
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=71.03 E-value=4.8 Score=40.47 Aligned_cols=26 Identities=27% Similarity=0.340 Sum_probs=22.9
Q ss_pred ccccCCeeecCCCceEEecccccccc
Q 042735 522 DISSKNVLLDLEHKAHVSDFGIAKFL 547 (667)
Q Consensus 522 dlk~~NiLld~~~~~kl~DFGla~~~ 547 (667)
|+.+.||+++.++.+.|.||+.+...
T Consensus 212 D~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 212 DIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 89999999998888999999887653
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=69.08 E-value=8 Score=35.94 Aligned_cols=53 Identities=8% Similarity=0.022 Sum_probs=30.6
Q ss_pred cCCeeecCCCceEEecccccccccCCCCCcccccccccccCCCC-----CCCchHHHHHHHHHHHHhCCCC
Q 042735 525 SKNVLLDLEHKAHVSDFGIAKFLKPDSSNWSALVGTYRYVAPDY-----RKKCDVYSFRVLALEVIKGKHP 590 (667)
Q Consensus 525 ~~NiLld~~~~~kl~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~-----~~~~DV~sfGvvl~ElltG~~p 590 (667)
|..|++..+|.+...+ +.+. .....+.|||. +.+.=|||+|+++|.-+-=..|
T Consensus 78 ~~~i~l~~dG~V~f~~-~~s~------------~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 78 AAQIRVWRDGAVTLAP-AADD------------AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp GGGEEEETTSCEEECC-C------------------------CCSSSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcceEEecCCceeccc-cccc------------ccccCCCChhhccccchHHHHHHHHHHHHHHHhhcCCC
Confidence 5678888888887763 2211 11123567886 4567899999999998754333
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=66.83 E-value=9.2 Score=37.86 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=54.3
Q ss_pred cCHHHHHHHHcCCcC-----cceeecccCeEEEEEEeCCCceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCC--Ce
Q 042735 411 FDYVEIIRAINDFDA-----KYCIGSGRHGSVYRAELPSKEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHR--NI 483 (667)
Q Consensus 411 ~~~~~~~~~~~~f~~-----~~~lg~g~~g~vy~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--ni 483 (667)
++.+++...+..|.. ...++ |....||+....+|+.+++|....... ....+..|.+++..+... .+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCee
Confidence 445555555544432 23466 888899998877777799998753211 123456677777666421 13
Q ss_pred eEEEEE-----EEeCCceEEEEEecCCCC
Q 042735 484 VKFYGF-----CSHARHSILIYEYLKRGS 507 (667)
Q Consensus 484 v~~~g~-----~~~~~~~~lv~ey~~~g~ 507 (667)
.+++.. ....+..+++|||++|..
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCC
Confidence 334332 122456678999998754
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=64.50 E-value=7 Score=40.25 Aligned_cols=78 Identities=14% Similarity=0.277 Sum_probs=45.1
Q ss_pred ceeecccCeEEEEEEeCC--------CceEEEEecCCCCCC--------chHHhH------HHHHHHHHHHHhcC-CCCe
Q 042735 427 YCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPS--------DQIADQ------KEFFAEIEALTKIR-HRNI 483 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~--------~~~~~~------~~~~~E~~~l~~l~-H~ni 483 (667)
+.+..|-...+|++..++ +..+.++........ ...... +....|..+++.+. |.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667788899988754 255777765432110 001111 12335888877775 5456
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCh
Q 042735 484 VKFYGFCSHARHSILIYEYLKRGSL 508 (667)
Q Consensus 484 v~~~g~~~~~~~~~lv~ey~~~g~L 508 (667)
.++++++..+ +|+||+++-+|
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L 158 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRL 158 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEEC
T ss_pred CeEEEEeCCC----eEEEecCCccC
Confidence 6778776432 89999996544
No 444
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=46.72 E-value=27 Score=36.20 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=47.2
Q ss_pred ceeecccCeEEEEEEeCC--------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceE
Q 042735 427 YCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~ 497 (667)
+.|+.|....+|++...+ +..+.+|+.... .. ...+.+|..++..+. +.-..++++.+.+ .
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 457888889999998763 467888876331 11 124557888888775 3334567776542 3
Q ss_pred EEEEecCCCC
Q 042735 498 LIYEYLKRGS 507 (667)
Q Consensus 498 lv~ey~~~g~ 507 (667)
+||||++|.+
T Consensus 149 ~v~e~l~G~~ 158 (429)
T 1nw1_A 149 RLEEYIPSRP 158 (429)
T ss_dssp EEECCCCEEE
T ss_pred EEEEEeCCcc
Confidence 8999998643
No 445
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.15 E-value=30 Score=27.52 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=40.1
Q ss_pred CCcCcCCCCccccCCCCCCEEEccCccccccCCccccCCCCCCeeecccc
Q 042735 12 DNYLTGLIPTETWNLKSLVKLGLGGNQFRGSLPSSVGNLSSLRYLFLFEN 61 (667)
Q Consensus 12 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 61 (667)
+..++.+...+|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34577777889999999999999877 45466788999999999998754
No 446
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=41.47 E-value=41 Score=35.16 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=46.0
Q ss_pred ceeecccCeEEEEEEeCC-CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCCe-eEEEEEEEeCCceEEEEEecC
Q 042735 427 YCIGSGRHGSVYRAELPS-KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRNI-VKFYGFCSHARHSILIYEYLK 504 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~~~g~~~~~~~~~lv~ey~~ 504 (667)
+.|+.|-...+|++...+ +..+.+|+........ -+ -.+|..++..+...++ .++++++. + .+||||++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~--id---R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI--IN---REREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC--SC---HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh--cC---HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 457888899999998865 4668888764321111 01 1478888888864444 56777763 2 35999999
Q ss_pred CCCh
Q 042735 505 RGSL 508 (667)
Q Consensus 505 ~g~L 508 (667)
|..+
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 447
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=31.94 E-value=44 Score=33.50 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=40.9
Q ss_pred ceeecccCeEEEEEEeCC---------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcCCCC-eeEEEEEEEeCCce
Q 042735 427 YCIGSGRHGSVYRAELPS---------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIRHRN-IVKFYGFCSHARHS 496 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~---------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~g~~~~~~~~ 496 (667)
..++.|....+|+....+ +..+.+|....... .. ....+|.+++..+.... +.++++.. . -
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~---~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--EL---YNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GT---SCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ce---ecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 356788889999998754 25677777543211 10 11346777777665223 34666554 2 3
Q ss_pred EEEEEecCCCC
Q 042735 497 ILIYEYLKRGS 507 (667)
Q Consensus 497 ~lv~ey~~~g~ 507 (667)
++||||++|..
T Consensus 110 ~~v~e~i~G~~ 120 (369)
T 3c5i_A 110 GRIEEWLYGDP 120 (369)
T ss_dssp EEEEECCCSEE
T ss_pred cEEEEEecCCc
Confidence 68999998754
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=27.58 E-value=1e+02 Score=31.71 Aligned_cols=73 Identities=10% Similarity=0.066 Sum_probs=45.1
Q ss_pred ceeecccCeEEEEEEeCC--------CceEEEEecCCCCCCchHHhHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCceE
Q 042735 427 YCIGSGRHGSVYRAELPS--------KEFLAVKKFNSPLPSDQIADQKEFFAEIEALTKIR-HRNIVKFYGFCSHARHSI 497 (667)
Q Consensus 427 ~~lg~g~~g~vy~~~~~~--------~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~g~~~~~~~~~ 497 (667)
+.+..|-...+|+....+ +..+.+|+........ . .-.+|.++++.+. +.-..++++.+ . -+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-i----dR~~E~~~l~~L~~~gi~P~l~~~~--~--~~ 146 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-Y----DSKVELDVFRYLSNINIAPNIIADF--P--EG 146 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-C----CHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-c----CHHHHHHHHHHHHhcCCCCCEEEEc--C--CC
Confidence 356778889999998763 4668888764321110 1 1236777777664 33345555543 2 37
Q ss_pred EEEEecCCCCh
Q 042735 498 LIYEYLKRGSL 508 (667)
Q Consensus 498 lv~ey~~~g~L 508 (667)
.||||++|..+
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998654
No 449
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.95 E-value=1e+02 Score=24.23 Aligned_cols=14 Identities=21% Similarity=0.494 Sum_probs=6.0
Q ss_pred cCCCCCCCCEEEcc
Q 042735 165 NWGKCPKLSTLNVS 178 (667)
Q Consensus 165 ~~~~l~~L~~L~L~ 178 (667)
+|.+|.+|+.+.+.
T Consensus 38 aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 38 MFSGCTALEKLILT 51 (100)
T ss_dssp SSTTCTTCCCEEEC
T ss_pred HHhccCCccEEEEc
Confidence 34444444444443
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=22.29 E-value=77 Score=29.16 Aligned_cols=98 Identities=6% Similarity=0.115 Sum_probs=58.5
Q ss_pred hcCCCCeeEEEEEEEeCCceEEEEEecCCC---------ChHHHhcc----c------cCCcccccccCCeeecCCCceE
Q 042735 477 KIRHRNIVKFYGFCSHARHSILIYEYLKRG---------SLATNLSN----D------AAAEELDISSKNVLLDLEHKAH 537 (667)
Q Consensus 477 ~l~H~niv~~~g~~~~~~~~~lv~ey~~~g---------~L~~~l~~----~------~~~~~~dlk~~NiLld~~~~~k 537 (667)
...||+.+.. .+-.+.+...+.|+.-+.+ +..+.++- . ......-+.|+||.+|.++.|+
T Consensus 41 ~~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~r~tf~L~P~NL~f~~~~~p~ 119 (215)
T 4ann_A 41 EQHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDELFFTRDGLPI 119 (215)
T ss_dssp GSCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGSSEECCCSGGGEEECTTSCEE
T ss_pred hccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcCceEEEEecceEEEcCCCCEE
Confidence 3468999876 4555566555555543322 11111110 0 0011236899999999999999
Q ss_pred EecccccccccCCCCCcccccccccccCCCCCCCchH-HHHHHHHHHHHhCCCCCC
Q 042735 538 VSDFGIAKFLKPDSSNWSALVGTYRYVAPDYRKKCDV-YSFRVLALEVIKGKHPRG 592 (667)
Q Consensus 538 l~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~~~~~DV-~sfGvvl~ElltG~~p~~ 592 (667)
+.-.|+...+.+.. ..+.|- -.+=+++..+++++..|+
T Consensus 120 i~~RGik~~l~P~~-----------------~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 120 AKTRGLQNVVDPLP-----------------VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ESCCEETTTBSCCC-----------------CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEccCccCCCCCC-----------------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 98888765433221 122333 367788888999987764
Done!