Query 042742
Match_columns 834
No_of_seqs 370 out of 846
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 15:41:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xfi_A Unknown protein; struct 100.0 1.8E-79 6.2E-84 677.9 29.4 348 454-833 5-365 (367)
2 2i7n_A Pantothenate kinase 1; 100.0 3.5E-75 1.2E-79 639.8 27.3 320 39-359 2-359 (360)
3 2ews_A Pantothenate kinase; PA 100.0 2.1E-53 7.2E-58 456.2 29.2 259 38-358 18-286 (287)
4 2g8l_A 287AA long hypothetical 100.0 3.3E-52 1.1E-56 449.3 21.8 278 487-833 15-297 (299)
5 2ffj_A Conserved hypothetical 100.0 1.4E-50 4.7E-55 437.4 18.4 279 486-830 14-298 (300)
6 3pt1_A UPF0364 protein YMR027W 100.0 3.1E-30 1E-34 291.2 14.4 263 537-813 106-427 (471)
7 1hux_A Activator of (R)-2-hydr 99.7 1.3E-16 4.5E-21 169.6 21.2 241 41-360 4-256 (270)
8 4ehu_A Activator of 2-hydroxyi 99.7 3.5E-16 1.2E-20 165.4 22.9 241 41-360 2-254 (276)
9 2ivn_A O-sialoglycoprotein end 99.0 4.6E-08 1.6E-12 106.7 22.5 205 121-356 72-294 (330)
10 4htl_A Beta-glucoside kinase; 98.3 0.00015 5.2E-09 77.3 24.3 79 280-359 212-290 (297)
11 2qm1_A Glucokinase; alpha-beta 98.1 0.00048 1.7E-08 73.6 25.3 82 279-360 236-321 (326)
12 3vgl_A Glucokinase; ROK family 98.1 0.00026 8.9E-09 76.3 23.3 80 280-359 227-311 (321)
13 2gup_A ROK family protein; sug 98.1 0.0005 1.7E-08 72.7 24.8 79 280-359 202-286 (292)
14 2ch5_A NAGK protein; transfera 98.1 0.00027 9.1E-09 76.4 21.9 194 130-359 89-323 (347)
15 3r8e_A Hypothetical sugar kina 98.1 0.00047 1.6E-08 74.2 23.4 79 280-358 235-317 (321)
16 2aa4_A Mannac kinase, putative 98.1 0.00043 1.5E-08 73.0 22.5 78 280-358 208-286 (289)
17 1saz_A Probable butyrate kinas 98.0 0.00025 8.6E-09 78.6 20.4 78 280-359 268-347 (381)
18 4db3_A Glcnac kinase, N-acetyl 98.0 0.0012 4.1E-08 71.4 24.5 78 280-358 244-324 (327)
19 3h1q_A Ethanolamine utilizatio 97.9 0.0014 4.6E-08 68.3 22.9 129 188-357 141-271 (272)
20 1z05_A Transcriptional regulat 97.9 0.0013 4.6E-08 73.6 24.2 79 280-359 332-414 (429)
21 2e2o_A Hexokinase; acetate and 97.9 0.00076 2.6E-08 71.5 20.7 74 279-359 213-286 (299)
22 3eno_A Putative O-sialoglycopr 97.9 0.00067 2.3E-08 74.1 20.4 196 131-356 95-299 (334)
23 2ap1_A Putative regulator prot 97.8 0.0016 5.6E-08 69.9 22.6 78 280-358 244-324 (327)
24 3vov_A Glucokinase, hexokinase 97.8 0.0025 8.5E-08 68.1 22.7 79 281-359 213-294 (302)
25 1z6r_A MLC protein; transcript 97.8 0.0019 6.5E-08 71.6 22.4 79 280-358 309-391 (406)
26 2hoe_A N-acetylglucosamine kin 97.6 0.0034 1.2E-07 69.2 21.7 80 280-359 289-370 (380)
27 2q2r_A Glucokinase 1, putative 97.2 0.027 9.1E-07 61.8 22.2 78 280-358 279-369 (373)
28 2yhw_A Bifunctional UDP-N-acet 97.2 0.056 1.9E-06 58.3 23.7 76 279-358 258-336 (343)
29 3htv_A D-allose kinase, alloki 97.0 0.026 9E-07 60.4 19.2 76 280-359 218-298 (310)
30 3en9_A Glycoprotease, O-sialog 96.9 0.016 5.5E-07 66.9 17.6 184 132-344 95-283 (540)
31 1sz2_A Glucokinase, glucose ki 96.9 0.047 1.6E-06 58.8 19.6 77 280-358 239-324 (332)
32 3epq_A Putative fructokinase; 96.8 0.084 2.9E-06 56.4 20.8 248 41-359 4-288 (302)
33 4g9i_A Hydrogenase maturation 96.8 0.011 3.9E-07 71.2 15.2 207 124-358 462-757 (772)
34 3mcp_A Glucokinase; structural 96.6 0.091 3.1E-06 58.0 19.2 50 280-330 234-283 (366)
35 1zbs_A Hypothetical protein PG 96.5 0.066 2.3E-06 56.6 17.4 69 279-358 209-278 (291)
36 3ven_A O-carbamoyltransferase 96.3 0.066 2.3E-06 62.4 16.8 231 99-359 51-356 (576)
37 1zc6_A Probable N-acetylglucos 96.2 0.31 1.1E-05 51.6 20.2 67 279-359 225-292 (305)
38 1zxo_A Conserved hypothetical 96.1 0.033 1.1E-06 58.9 11.9 72 279-361 207-279 (291)
39 2w40_A Glycerol kinase, putati 95.8 0.1 3.6E-06 59.5 15.3 156 188-359 263-453 (503)
40 1woq_A Inorganic polyphosphate 95.7 0.95 3.2E-05 46.9 21.0 153 130-358 105-259 (267)
41 2itm_A Xylulose kinase, xylulo 95.7 0.11 3.7E-06 59.1 14.5 128 218-359 294-433 (484)
42 2d4w_A Glycerol kinase; alpha 95.6 0.14 4.8E-06 58.5 15.1 156 188-359 260-449 (504)
43 2dpn_A Glycerol kinase; thermu 95.4 0.16 5.5E-06 57.8 14.7 155 188-359 257-444 (495)
44 3g25_A Glycerol kinase; IDP007 95.4 0.27 9.4E-06 56.0 16.6 131 214-359 308-450 (501)
45 3jvp_A Ribulokinase; PSI-II, N 95.3 0.15 5.3E-06 59.2 14.5 156 188-359 289-486 (572)
46 2zf5_O Glycerol kinase; hypert 95.1 0.21 7E-06 57.0 14.4 156 188-359 254-439 (497)
47 2p3r_A Glycerol kinase; glycer 95.1 0.26 8.8E-06 56.5 15.2 157 188-359 259-447 (510)
48 4e1j_A Glycerol kinase; struct 95.0 0.31 1.1E-05 56.0 15.5 132 213-359 326-471 (520)
49 3h3n_X Glycerol kinase; ATP-bi 95.0 0.44 1.5E-05 54.4 16.8 131 214-359 307-449 (506)
50 3ifr_A Carbohydrate kinase, FG 94.9 0.23 7.9E-06 56.9 14.3 157 188-359 260-446 (508)
51 3i8b_A Xylulose kinase; strain 94.8 0.58 2E-05 53.8 17.1 156 188-359 288-470 (515)
52 3hz6_A Xylulokinase; xylulose, 94.2 0.56 1.9E-05 53.7 15.2 156 188-359 258-449 (511)
53 1bdg_A Hexokinase; phosphotran 94.1 2.4 8.2E-05 47.9 19.9 78 281-359 366-445 (451)
54 3ll3_A Gluconate kinase; xylul 93.8 0.83 2.9E-05 52.2 15.7 156 188-359 254-439 (504)
55 3bex_A Type III pantothenate k 92.0 3.5 0.00012 42.9 15.9 28 186-216 122-149 (249)
56 3ezw_A Glycerol kinase; glycer 92.0 2.3 7.8E-05 48.8 15.9 89 256-359 358-448 (526)
57 3l0q_A Xylulose kinase; xlylul 91.3 4.4 0.00015 46.7 17.4 89 256-359 396-488 (554)
58 4bc3_A Xylulose kinase; transf 90.2 2.2 7.4E-05 49.1 13.4 160 188-359 296-480 (538)
59 3djc_A Type III pantothenate k 89.7 11 0.00037 39.7 17.2 101 186-316 125-228 (266)
60 3vth_A Hydrogenase maturation 89.3 0.76 2.6E-05 55.3 8.9 81 275-359 663-746 (761)
61 2zgy_A Plasmid segregation pro 88.2 2.9 0.0001 44.4 11.7 143 186-357 164-318 (320)
62 4ijn_A Acetate kinase, acetoki 87.0 2.9 9.8E-05 46.6 11.0 47 280-326 297-344 (398)
63 3khy_A Propionate kinase; csgi 86.8 2.6 9E-05 46.6 10.4 50 281-330 288-338 (384)
64 2iir_A Acetate kinase; transfe 84.9 5.7 0.0002 44.3 12.0 50 281-330 297-347 (403)
65 3r9p_A ACKA; ssgcid, seattle s 84.7 2 6.7E-05 47.8 8.1 46 281-326 289-335 (391)
66 2h3g_X Biosynthetic protein; p 83.9 29 0.001 36.3 16.5 100 186-315 123-223 (268)
67 3ttc_A HYPF, transcriptional r 81.9 3.2 0.00011 49.2 9.0 78 275-358 569-649 (657)
68 1g99_A Acetate kinase; alpha/b 81.1 6 0.0002 44.2 10.3 52 281-332 297-349 (408)
69 2e1z_A Propionate kinase; TDCD 78.5 6.5 0.00022 44.0 9.5 138 187-333 211-358 (415)
70 4a2a_A Cell division protein F 76.3 16 0.00053 40.7 12.0 155 187-360 207-393 (419)
71 2ych_A Competence protein PILM 75.3 36 0.0012 36.4 14.3 155 187-358 192-372 (377)
72 4h0o_A Acetate kinase; askha ( 73.9 15 0.00052 40.9 10.8 51 280-330 300-351 (404)
73 3i33_A Heat shock-related 70 k 70.4 8.1 0.00028 42.0 7.7 50 304-359 350-399 (404)
74 2yhx_A Hexokinase B; transfera 69.8 7.7 0.00026 43.9 7.5 35 26-60 45-81 (457)
75 2uyt_A Rhamnulokinase; rhamnos 69.0 13 0.00045 41.8 9.3 74 275-357 361-436 (489)
76 3sk3_A Acetate kinase, acetoki 58.5 33 0.0011 38.4 9.6 129 187-327 220-361 (415)
77 4apw_A ALP12; actin-like prote 53.4 15 0.0005 39.4 5.7 43 119-161 280-323 (329)
78 4h0p_A Acetate kinase; askha ( 51.1 49 0.0017 37.2 9.5 50 281-330 321-377 (438)
79 3qbx_A Anhydro-N-acetylmuramic 48.5 32 0.0011 38.0 7.3 160 186-358 156-334 (371)
80 1cza_N Hexokinase type I; stru 40.8 16 0.00055 44.9 3.9 77 281-359 374-458 (917)
81 1yuw_A Heat shock cognate 71 k 39.7 28 0.00096 40.0 5.6 50 304-359 329-378 (554)
82 3d2f_A Heat shock protein homo 33.2 91 0.0031 36.8 8.6 49 304-359 333-381 (675)
83 3oti_A CALG3; calicheamicin, T 33.0 36 0.0012 36.3 4.8 36 658-694 21-56 (398)
84 3o8m_A Hexokinase; rnaseh-like 32.7 24 0.00083 40.2 3.4 30 32-61 72-101 (485)
85 3h6e_A Carbohydrate kinase, FG 32.6 43 0.0015 37.9 5.5 70 279-359 362-434 (482)
86 3tsa_A SPNG, NDP-rhamnosyltran 31.3 37 0.0013 35.9 4.5 34 659-693 3-36 (391)
87 2fsj_A Hypothetical protein TA 30.7 46 0.0016 35.7 5.1 43 119-161 298-343 (346)
88 3qfu_A 78 kDa glucose-regulate 29.5 59 0.002 34.8 5.7 48 305-358 343-390 (394)
89 4fzr_A SSFS6; structural genom 28.7 50 0.0017 35.1 5.0 37 657-694 15-51 (398)
90 2f9w_A Pantothenate kinase; CO 28.2 5.3E+02 0.018 26.8 18.3 98 186-316 138-243 (271)
91 3h4t_A Glycosyltransferase GTF 27.4 35 0.0012 36.8 3.5 35 659-694 2-36 (404)
92 2zgy_A Plasmid segregation pro 27.2 49 0.0017 34.8 4.5 40 119-158 274-317 (320)
93 2d0o_A DIOL dehydratase-reacti 27.1 8E+02 0.027 28.6 14.6 206 122-359 362-603 (610)
94 2ekp_A 2-deoxy-D-gluconate 3-d 25.6 1.9E+02 0.0063 28.5 8.3 34 658-696 3-36 (239)
95 3ia7_A CALG4; glycosysltransfe 25.1 56 0.0019 34.4 4.5 36 658-694 5-40 (402)
96 4amg_A Snogd; transferase, pol 24.3 64 0.0022 34.0 4.8 36 658-694 23-58 (400)
97 1xu9_A Corticosteroid 11-beta- 23.5 32 0.0011 35.2 2.2 35 657-696 28-62 (286)
98 1dkg_D Molecular chaperone DNA 23.1 73 0.0025 34.0 4.9 49 304-359 332-380 (383)
99 2nm0_A Probable 3-oxacyl-(acyl 21.5 1.5E+02 0.005 29.9 6.6 36 657-697 21-56 (253)
100 3ezl_A Acetoacetyl-COA reducta 20.6 1.5E+02 0.005 29.4 6.4 33 656-693 12-44 (256)
101 3otg_A CALG1; calicheamicin, T 20.4 99 0.0034 32.7 5.3 38 657-695 20-57 (412)
102 4apw_A ALP12; actin-like prote 20.4 1.8E+02 0.0062 30.8 7.3 44 306-358 279-322 (329)
103 3l0q_A Xylulose kinase; xlylul 20.3 69 0.0023 36.7 4.2 48 113-160 438-487 (554)
104 3lm2_A Putative kinase; struct 20.1 46 0.0016 33.9 2.4 39 135-199 87-125 (226)
No 1
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=100.00 E-value=1.8e-79 Score=677.87 Aligned_cols=348 Identities=37% Similarity=0.673 Sum_probs=303.9
Q ss_pred cccccCCCcCCC--CCCCCCccCC---C----Ch-HHhhHHHHhhhccHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHH
Q 042742 454 PTLEVFPLLADP--KMYEPNTIDL---A----DR-SELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAH 523 (834)
Q Consensus 454 ~~~~~~pll~~~--~~y~p~t~d~---~----d~-~~r~yw~~~~~~~i~~~~~~a~~~~~~~~d~~~ra~~f~~~~~~~ 523 (834)
.++++||||.|| .+|+|||+|| . |+ ++|+|||+||+++||.|+++|..+ +.++++++|+++|+++|.++
T Consensus 5 ~~~~~~pll~~~~~~~y~p~t~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~a~~~-~~~~~a~~ra~~f~~~~~~~ 83 (367)
T 1xfi_A 5 SEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESD-ITVPDAPARAEKFAERYAGI 83 (367)
T ss_dssp -CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTC-TTSTTHHHHHHHHHHHHHHH
T ss_pred cccccCcccCCccccCCCCCccCCCCCcccccccHHHHHHHHHHHHHhhHHHHHHhccC-CCCccHHHHHHHHHHHHHHH
Confidence 368999999999 7999999999 2 44 999999999999999999999888 78889999999999999999
Q ss_pred HHhhhcCCCcccc-hhhhhHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHhHHHHHHHHhcCC-hHHHHHHHHHHhhccc
Q 042742 524 LARLMEEPAAYGK-LGLANLLELREECLREFQFLDAYRSIKQRENEASLAVLPDLLVELDSMS-KETRLLMLIEGVLAAN 601 (834)
Q Consensus 524 L~~l~~~P~~~g~-~~~r~l~~l~~~~l~~~g~~DPy~~~K~~~N~~Al~~l~~l~~~ld~~~-~~~~l~~lik~alaGN 601 (834)
|++++++|.+||. +++|+++++++++++++|+.|||+++|+++|+.|+++++.+.+.+++++ .+++|.+++++++|||
T Consensus 84 l~~l~~~p~~~g~~~~~r~~~~~~~~il~~~g~~DPf~~~K~~~n~~al~~l~~l~~~l~~~~~~~~~l~~llr~al~GN 163 (367)
T 1xfi_A 84 LEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGN 163 (367)
T ss_dssp HHHHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCccccCCcchHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Confidence 9999999999999 7999999999999999999999999999999999999999999998764 4678999999999999
Q ss_pred cccccccccccccccchHHHHHHHHHhhc-CCCcccCCHHHHHHHHhcCCCCCCCCCceEEEEecCCCchhhhchHHHHH
Q 042742 602 IFDWGSRACVDLYHKGTIIEIYRMSRNKM-QRPWRVDDFDAFKERMLGSGDNKPRPHKRALLFVDNSGADVVLGMLPLAR 680 (834)
Q Consensus 602 i~Dlg~~~~~d~~~~~~l~~~~~~~~~~l-~r~w~vDd~d~~~~~L~~~~~~~~~~~k~vl~~~DNAG~EIV~DllpLa~ 680 (834)
++|||+....+..++.+. .+++.++++ +++|++||+++|+++|.+ .++++|+||+||||+|||+|++|||+
T Consensus 164 ~~Dlg~~~~~~~~~~~~~--~~~~~~~~~~~~~~lvdd~~~l~~~L~~------~~~k~Vl~v~DNAG~Eiv~D~L~La~ 235 (367)
T 1xfi_A 164 IFDLGSAQLAEVFSRDGM--SFLASCQNLVPRPWVIDDLENFQAKWIN------KSWKKAVIFVDNSGADIILGILPFAR 235 (367)
T ss_dssp HC---------------C--CHHHHTTCSCCSSCSEECHHHHHHHHTT------TCCCEEEEECCBTTHHHHHTHHHHHH
T ss_pred ccccccccccccccccCC--CHHHHHHHhhccCCCcCCHHHHHHHhcc------cCCCEEEEEecCCCchhhccHHHHHH
Confidence 999998765433221111 123455665 889999999999999973 35689999999999999999777999
Q ss_pred HHHhCCCEEEEEecCccceeccchhhHHHHHHHHHhhChhHHHHHHhCCchhhhhhhccCCCCCCCCCcceEEEeCCCCC
Q 042742 681 ELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGS 760 (834)
Q Consensus 681 eLl~~G~kVil~vK~~P~iNDvT~~Dl~~ll~~la~~~~~l~~A~~~G~~~~d~~~~~~~~~~~~~~~~~l~Vi~sG~~~ 760 (834)
+|+++|++|+||||+.|+|||||++|+.|+|++++..++.|+ +++++++.|+++|+++
T Consensus 236 ~Ll~~g~kVvl~vK~~P~vnDvT~~D~~~~L~~l~~~~~~L~----------------------~l~~g~l~vi~~G~~~ 293 (367)
T 1xfi_A 236 ELLRRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLL----------------------GVDTSKLLIANSGNDL 293 (367)
T ss_dssp HHHHTTCEEEEEEBSSCCTTBCBHHHHHHHHHHHC--CCEET----------------------TEECTTEEEEECCCCS
T ss_pred HHHHcCCEEEEEECCcCceeeCCHHHHHHHHHHHHhcchhhh----------------------hhccCcEEEEcCCCCC
Confidence 999999999999999999999999999999888855443332 2445589999999999
Q ss_pred CCcCcccCCHHHHHHhccCcEEEEecCCCcccccccccccccchhhhhccCHHHHHHhcCCcceeeEEEecCC
Q 042742 761 PCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEPA 833 (834)
Q Consensus 761 pgldL~~vS~el~~~l~~ADLVI~KGmgn~ihtN~ea~~~~~~l~L~~vKc~~vA~~l~G~~~~d~V~k~e~~ 833 (834)
||++|+++|+||++++++|||||+||||||+||||+++|+|++++|+|+||+|||++| |+++|||||+||++
T Consensus 294 ~~~~l~~~s~el~~~l~~ADLVI~KG~gNyl~t~~~~~f~~~i~~L~~iKc~~vA~~l-g~~~~~~V~~~~~~ 365 (367)
T 1xfi_A 294 PVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFL-GGRLYDCVFKFNEV 365 (367)
T ss_dssp SSCCTTSBCHHHHHHHTTCSEEEEESHHHHTTBSTTCCCSSEEEEEEECCCHHHHHHH-TCCTTCEEEEEECC
T ss_pred CCcChHHCCHHHHHHHccCCEEEEECCCCCCccchhhhcCcchhHHHhhCcHHHHHHh-CCCcCCEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999999997 99999999999975
No 2
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=3.5e-75 Score=639.84 Aligned_cols=320 Identities=34% Similarity=0.611 Sum_probs=257.6
Q ss_pred CCceEEEEeccceeEEEEEeecCCCccc-hhh--hhhhhhhccccC----------CCCc----CCCCCCCeEEEeEeec
Q 042742 39 DISHLALDIGGSLIKLVYFSRHEDQSID-DKR--KKTIKERLGISN----------GNRR----SYPILGGRLHFVKFET 101 (834)
Q Consensus 39 ~~~~~giDIGGSL~Kivy~~~~~~~~~~-~~~--~~~~~~~~~~~~----------~~~~----~~~~~~g~l~F~~f~t 101 (834)
.++||||||||||||||||++....+.+ ++. .....+++..++ .+.. ..+.++|+|||++|||
T Consensus 2 ~~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~t 81 (360)
T 2i7n_A 2 PFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPS 81 (360)
T ss_dssp -CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEEG
T ss_pred CCCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEeeh
Confidence 5789999999999999999985422111 000 000111221111 1111 0134579999999999
Q ss_pred CCHHHHHHHHHhccccc--CcEEEeCCccccchhHHHHHhCCCcccchhhHHHHHHHHHHH---hcccccceEeecCce-
Q 042742 102 TKISECLDFIHSKQLHR--GGIHATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLL---KAIRHEAFTHMEGQK- 175 (834)
Q Consensus 102 ~~i~~~l~fi~~~~~~~--~~i~~TGGGA~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl---~~~~~e~f~~~~~~~- 175 (834)
++|++|++|+++++++. ..|++|||||+||.+.|++++|+++.|+|||+|+++|++||+ .++|.|+|||.+.++
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~~ 161 (360)
T 2i7n_A 82 CAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNP 161 (360)
T ss_dssp GGHHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEEESTTCT
T ss_pred hhHHHHHHHHHHcCCCccCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEecccccc
Confidence 99999999998887653 359999999999999999999999999999999999999999 478999999987542
Q ss_pred ---eeeecCCCCCccEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCC------
Q 042742 176 ---EFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDN------ 246 (834)
Q Consensus 176 ---~~~~~~~~~~~PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~------ 246 (834)
.+.+.+..++||||||||||||||++|+++++|+|||||++||||||||++||||+.|||||++||++||+
T Consensus 162 ~~~~~~~~~~~~~~PyllVnIGsGvSiikv~~~~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~lA~~Gd~~~vDll 241 (360)
T 2i7n_A 162 ELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKL 241 (360)
T ss_dssp TTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHHHHHCCGGGTSEE
T ss_pred ccccccccccccCCceEEEEeCCCcEEEEEcCCCCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHHHHcCCCCcccce
Confidence 23345567889999999999999999998889999999999999999999999999999999999999998
Q ss_pred ------CCCCCCCCCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcc
Q 042742 247 ------RDHRHIGLSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHA 320 (834)
Q Consensus 247 ------~dy~~~GL~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~ 320 (834)
++|.++|||+++|||||||+....+ .+++++||||+||+.||++||+|+|+|+|+++++++|||+|+|+++|+
T Consensus 242 V~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~-~~~~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~ 320 (360)
T 2i7n_A 242 VKDIYGGDYERFGLQGSAVASSFGNMMSKEK-RDSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINM 320 (360)
T ss_dssp HHHHHSSCBGGGTBCTTSEEETTTTTTSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSS
T ss_pred eeecccCcccccCCCccceeehhhhHhhHhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCH
Confidence 4588999999999999999965432 258999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 321 YTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 321 ~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..|++|+++++|||+++++++|++|++|+|||||+|.+.
T Consensus 321 ~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~~ 359 (360)
T 2i7n_A 321 VSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELF 359 (360)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999753
No 3
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=100.00 E-value=2.1e-53 Score=456.21 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=226.7
Q ss_pred CCCceEEEEeccceeEEEEEeecCCCccchhhhhhhhhhccccCCCCcCCCCCCCeEEEeEeecCCHHHHHHHHHhcccc
Q 042742 38 DDISHLALDIGGSLIKLVYFSRHEDQSIDDKRKKTIKERLGISNGNRRSYPILGGRLHFVKFETTKISECLDFIHSKQLH 117 (834)
Q Consensus 38 ~~~~~~giDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~l~fi~~~~~~ 117 (834)
....++|||||||++|+||++ +++++|.+|++.+++++++++....
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~--------------------------------~~~i~~~~~~~~~~~~~l~~l~~~~-- 63 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQ--------------------------------DNQRTFKTELTKNIDQVVEWLNQQQ-- 63 (287)
T ss_dssp ---CEEEEEECSSEEEEEEEC--------------------------------SSCEEEEEEEGGGHHHHHHHHHTSC--
T ss_pred CCCeEEEEEEChhhEEEEEEc--------------------------------CCEEEEEEechHHHHHHHHHhcccC--
Confidence 456899999999999999974 2358899999999999999995433
Q ss_pred cCcEEEeCCccccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCce
Q 042742 118 RGGIHATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGV 197 (834)
Q Consensus 118 ~~~i~~TGGGA~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGv 197 (834)
...|++||||++++.+ .+|+++.+++||+|+++|+.||.+.+ +.+++||+|||||+|+
T Consensus 64 ~~~i~~TG~G~~~~~~----~l~~~~~~v~Ei~~~~~Ga~~l~~~~------------------~~~~~~~~vIdIGg~d 121 (287)
T 2ews_A 64 IEKLCLTGGNAGVIAE----NINIPAQIFVEFDAASQGLGILLKEQ------------------GHDLADYIFANVGTGT 121 (287)
T ss_dssp CSEEEEESTTHHHHHT----TSSSCCEECCHHHHHHHHHHHHHHHT------------------TCCCSCEEEEEESSSE
T ss_pred ceEEEEEChhHHhHhH----hhCCCcceeehhHHHHHHHHHhcccC------------------CCCcCCeEEEEeCCCe
Confidence 2459999999998876 57889999999999999999999854 2567899999999999
Q ss_pred EEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCC-------CC-CC--CCCCCcccccccccccc
Q 042742 198 SMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDN-------RD-HR--HIGLSASTIASSFGKTI 267 (834)
Q Consensus 198 SiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~-------~d-y~--~~GL~~d~iASsFGK~~ 267 (834)
||++|+ +++|+|++||++||||||||+++|+|+.+|+|+.+||++||+ .| |+ ..|||.++|||+|||+.
T Consensus 122 sii~v~-~~~f~r~~g~aaGgGtFl~l~a~ll~~~~~~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk~~ 200 (287)
T 2ews_A 122 SLHYFD-GQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVL 200 (287)
T ss_dssp EEEEEC-SSCEEEEEEESCSHHHHHHHHHHHHCCCCHHHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTTGG
T ss_pred EEEEEc-CCceEEcCccccchhhHHHHHHHHhCCCCHHHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHHHH
Confidence 999999 569999999999999999999999999899999999999997 23 32 34899999999999975
Q ss_pred cccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCc
Q 042742 268 SDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEG 347 (834)
Q Consensus 268 ~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~g 347 (834)
. ...+++++||||+||++||++||+++|+++|+++++++|+|+|+|+++++..++.++ ++|+.++.+++|++|++
T Consensus 201 ~--l~~~g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~---~~~~~~~~~~~~p~~~~ 275 (287)
T 2ews_A 201 H--HLDADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVE---DYTVLRGCKPYYVENGA 275 (287)
T ss_dssp G--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHH---HHHHHTTCEEEECTTGG
T ss_pred H--HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHH---HHHhhCCceEEECCCcc
Confidence 4 333589999999999999999999999999999999999999999999999998887 47888899999999999
Q ss_pred hhhHHHHHhcc
Q 042742 348 FLGALGAFMSY 358 (834)
Q Consensus 348 y~GAlGA~L~~ 358 (834)
|+|||||+|..
T Consensus 276 ~~gAlGAaL~~ 286 (287)
T 2ews_A 276 FSGAIGALYLE 286 (287)
T ss_dssp GHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999964
No 4
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=100.00 E-value=3.3e-52 Score=449.26 Aligned_cols=278 Identities=19% Similarity=0.195 Sum_probs=227.4
Q ss_pred hhhccHHHHHHHHhhhcCCC-chHHHHHHHHHHHHHHHHHhhhcCCCcccchhhhhHHHHHHHHHHHcCCCcccHHHHHH
Q 042742 487 VLSEHLPDLVDKAVASEGGT-DDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANLLELREECLREFQFLDAYRSIKQR 565 (834)
Q Consensus 487 ~~~~~i~~~~~~a~~~~~~~-~d~~~ra~~f~~~~~~~L~~l~~~P~~~g~~~~r~l~~l~~~~l~~~g~~DPy~~~K~~ 565 (834)
...+|+||+++|+....... .|...+.+ ..+.....+..-. +| +....+...++++.+++.+|+.|||+++|++
T Consensus 15 ~~~~C~~C~~~q~~~~~~~~~~d~~~~~~-i~~~~~~~l~~~~-~~---~~~p~~~~~~l~r~i~~~~g~~DPy~~~K~~ 89 (299)
T 2g8l_A 15 VQYECLTCMANQCQRIVEMATQDMDIRRR-AMILAAKLLAKEY-NE---NAIPAIAGSLIFLELYKFLGNDDPFIEYKLK 89 (299)
T ss_dssp CCTTHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHS-ST---TCCHHHHHHHHHHHHHHHHTCSCTTHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHhhc-CC---CCCcHHHHHHHHHHHHHHcCCCCChHHHHHH
Confidence 45789999999997665543 34333322 4444444443211 23 2233455679999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhcCChHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHhhcCCCcccCCHHHHHHH
Q 042742 566 ENEASLAVLPDLLVELDSMSKETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKER 645 (834)
Q Consensus 566 ~N~~Al~~l~~l~~~ld~~~~~~~l~~lik~alaGNi~Dlg~~~~~d~~~~~~l~~~~~~~~~~l~r~w~vDd~d~~~~~ 645 (834)
+|+.|++++|.+.+.+ .++|.+++++++|||++|||+.... .+ +.++..+.++++|.+||+++|+++
T Consensus 90 ~n~~al~~~~~~~~~l-----~d~l~~~l~~sl~GN~~D~g~~~~~-----~d---~~~~~~~~~~~~~~~dd~~~l~~~ 156 (299)
T 2g8l_A 90 SEEMARKVADIIKRKL-----KLDFELAVKLAIIGNVIDFSVGFSP-----ED---LEEEVEKMLKDKLYIDDSKELFEE 156 (299)
T ss_dssp HHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHCCTTSCSCH-----HH---HHHHHHHHHTSCCSEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhhccccCC-----CC---HHHHHHHHhhcCCCcccHHHHHHH
Confidence 9999999999887776 2469999999999999999974221 11 223344556999999999999999
Q ss_pred HhcCCCCCCCCCceEEEEecCCCchhhhchHHHHHHHHh-CCCEEEEEecCccceeccchhhHHHHHHHHHhhChhHHHH
Q 042742 646 MLGSGDNKPRPHKRALLFVDNSGADVVLGMLPLARELLR-RGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRA 724 (834)
Q Consensus 646 L~~~~~~~~~~~k~vl~~~DNAG~EIV~DllpLa~eLl~-~G~kVil~vK~~P~iNDvT~~Dl~~ll~~la~~~~~l~~A 724 (834)
|. ++++|+||+|||| |+|+|++ ||++|++ +|++|++|||+.|++||||++|+.|
T Consensus 157 l~--------~~~~v~~v~DNaG-Eiv~Dl~-l~~~Ll~~~g~~V~~~vK~~P~vnDvT~~D~~~--------------- 211 (299)
T 2g8l_A 157 VK--------RAENILYITDNVG-EHYFDAI-LIEKIREISNAEVYIAGKEGPIINDATVEDLKR--------------- 211 (299)
T ss_dssp HH--------HCSEEEEECCBTT-HHHHHHH-HHHHHHHHCCCEEEEEEBSSCCTTBCBHHHHHH---------------
T ss_pred hc--------cCCEEEEEecCCc-cHHHhHH-HHHHHHHhcCCeEEEEECCcCceeeCCHHHHHH---------------
Confidence 97 3689999999999 9999986 9999999 9999999999999999999999654
Q ss_pred HHhCCchhhhhhhccCCCCCCCCCcceEEEeCCCCCCCcCcccCCHHHHHHhccCcEEEEecCCCccccccccccc---c
Q 042742 725 AEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFK---C 801 (834)
Q Consensus 725 ~~~G~~~~d~~~~~~~~~~~~~~~~~l~Vi~sG~~~pgldL~~vS~el~~~l~~ADLVI~KGmgn~ihtN~ea~~~---~ 801 (834)
.| +++ .+.|++||+++||++|+++|+||++++++|||||+|||| |||++++ +
T Consensus 212 --~~---~~~---------------~~~vi~~G~~~~g~~l~~~s~el~~~~~~adLVI~KG~~-----Nye~L~~d~~~ 266 (299)
T 2g8l_A 212 --AG---LEK---------------LGKVISTGTRIVGVPLKLVSREFMEAFNKADVIIAKGQG-----NFETLSEINDS 266 (299)
T ss_dssp --TT---GGG---------------TSEEEECSSSSSSCCTTTSCHHHHHHHHHCSEEEEEHHH-----HHHHHTTSCCT
T ss_pred --cC---cch---------------hhhhhcCCCCCCCCChHhCCHHHHHHHhcCCEEEEeCCc-----hHhhhhcCCCC
Confidence 24 322 258999999999999999999999999999999999999 9999995 4
Q ss_pred cchhhhhccCHHHHHHhcCCcceeeEEEecCC
Q 042742 802 EALKLAMVKNQRLAEKLIKGNIYDCVCRYEPA 833 (834)
Q Consensus 802 ~~l~L~~vKc~~vA~~l~G~~~~d~V~k~e~~ 833 (834)
++++|+++||+|||++| |++++++||+|+.-
T Consensus 267 ~i~~L~~~Kc~~va~~l-G~~~g~~V~~~~~~ 297 (299)
T 2g8l_A 267 RIFFLLKAKCPAVAREL-KVPKGALVCMRNKF 297 (299)
T ss_dssp TEEEEEECCSHHHHHHH-TSCTTCEEEEECC-
T ss_pred CeehhhhcCCHHHHHHh-CCCCCCEEEEeccc
Confidence 89999999999999997 99999999999864
No 5
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=100.00 E-value=1.4e-50 Score=437.42 Aligned_cols=279 Identities=20% Similarity=0.241 Sum_probs=217.6
Q ss_pred HhhhccHHHHHHHHhhhcCCC-chHHHHHHHHHHHHHHHHHh-hhcCCCcccchhhhhHHHHHHHHHHHcCCCcccHHHH
Q 042742 486 TVLSEHLPDLVDKAVASEGGT-DDAKRRGDAFARAFSAHLAR-LMEEPAAYGKLGLANLLELREECLREFQFLDAYRSIK 563 (834)
Q Consensus 486 ~~~~~~i~~~~~~a~~~~~~~-~d~~~ra~~f~~~~~~~L~~-l~~~P~~~g~~~~r~l~~l~~~~l~~~g~~DPy~~~K 563 (834)
....+|+||+++|+....... .|...+.+ ..+.....+.. + ++ +....+..+.+++.+++.+|++|||+++|
T Consensus 14 ~~~~~C~~C~~~q~~~~~~~~~~d~~~~~~-i~~~~~~~l~~~~--~~---~~~p~~~~~~lyr~i~~~~g~~Dpf~~~K 87 (300)
T 2ffj_A 14 KISPLCPSCLLGRVYYEAKLVTDDEDLISQ-CVDESLKILAENY--SS---RPINAHLATRIHRRVYEILGVEDPYAEVK 87 (300)
T ss_dssp ------CHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHTCSCTTHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHhhc--CC---CCCcHHHHHHHHHHHHHHcCCCCchHHHH
Confidence 466899999999997665543 34333322 34443333332 2 22 22223455799999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHhcCChHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHhhcCCCcccCCHHHHH
Q 042742 564 QRENEASLAVLPDLLVELDSMSKETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFK 643 (834)
Q Consensus 564 ~~~N~~Al~~l~~l~~~ld~~~~~~~l~~lik~alaGNi~Dlg~~~~~d~~~~~~l~~~~~~~~~~l~r~w~vDd~d~~~ 643 (834)
+++|+.|+++++.+.+.+++. +++|.+++++++|||++|||+.... . .+ .++.++..+.++++|++||+++||
T Consensus 88 ~~~n~~a~~~l~~~~~~l~~~--~~~l~~~l~~sl~GN~~D~g~~~~~--~--~~-~d~~~~~~~~~~~~~~~dd~~~~~ 160 (300)
T 2ffj_A 88 ARANEVARQVLPLAKEIVEGS--DDPFKTAVIVSIVGNNFDYGVQGHK--V--VE-EEFRDFLKRKVQEGLKINDTERIK 160 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS--SSHHHHHHHHHHHGGGCCC--------C--HH-HHHHHHHHHHHHHCCSEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHhhHhhhccccccc--c--cC-CCHHHHHHHhhccCcCcCCHHHHH
Confidence 999999999999988888764 4579999999999999999974321 0 00 112233345568999999999999
Q ss_pred HHHhcCCCCCCCCCceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEecCccceeccchhhHHHHHHHHHhhChhHHH
Q 042742 644 ERMLGSGDNKPRPHKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRR 723 (834)
Q Consensus 644 ~~L~~~~~~~~~~~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK~~P~iNDvT~~Dl~~ll~~la~~~~~l~~ 723 (834)
++|. ++|+||+|||| |||+|++ ||++|+++|++|++|||+.|++||||++|+.|+
T Consensus 161 ~~l~----------~~v~~v~DNaG-Eiv~Dll-l~~~Ll~~g~~V~~~vK~~P~vnDvT~~D~~~~------------- 215 (300)
T 2ffj_A 161 ELSS----------GKVVYLTDNAG-EIFFDTL-LMKEIKRRCEKLTAVVRGRPIISDATIEDARLA------------- 215 (300)
T ss_dssp HHTT----------SEEEEECCBTT-HHHHHHH-HHHHHHTTCSEEEEEEBSSCCTTBCBHHHHHHT-------------
T ss_pred HHhc----------CCEEEEecCCc-cHHHHHH-HHHHHHHcCCeEEEEECCcCceecCCHHHHHHh-------------
Confidence 9983 79999999999 9999999 999999999999999999999999999997664
Q ss_pred HHHhCCchhhhhhhccCCCCCCCCCcceEEEeC-CCCCCCcCcccCCHHHHHHhccCcEEEEecCCCccccccccccc--
Q 042742 724 AAEAGGLLVDAMINTLDGSKENSPSVPLMVVEN-GCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFK-- 800 (834)
Q Consensus 724 A~~~G~~~~d~~~~~~~~~~~~~~~~~l~Vi~s-G~~~pgldL~~vS~el~~~l~~ADLVI~KGmgn~ihtN~ea~~~-- 800 (834)
| +++. ..+++| |+++||++|+++|+||++++++|||||+|||| ||+++++
T Consensus 216 ----~---l~~~---------------~~vi~~~G~~~~~~~l~~~s~el~~~l~~adLVI~KG~~-----Nyr~L~~~~ 268 (300)
T 2ffj_A 216 ----R---VDKI---------------ADELLTNGKGAIGIIMDELPDETRKALEEADLIVAKGMA-----NYECLSDGS 268 (300)
T ss_dssp ----T---HHHH---------------SSEEEECSSCCSSCCGGGCCHHHHHHHHHCSEEEEESHH-----HHHHHC---
T ss_pred ----h---hhHH---------------HhhhcCCCCCCCCcChHhCCHHHHHHHccCCEEEEECCh-----HHHHHhCCC
Confidence 2 2211 368999 99999999999999999999999999999999 9999974
Q ss_pred -ccchhhhhccCHHHHHHhcCCcceeeEEEe
Q 042742 801 -CEALKLAMVKNQRLAEKLIKGNIYDCVCRY 830 (834)
Q Consensus 801 -~~~l~L~~vKc~~vA~~l~G~~~~d~V~k~ 830 (834)
+++++|+++||+|+|++| |++++++||++
T Consensus 269 ~~~i~~L~~~Kc~vva~~l-G~~~g~~v~~~ 298 (300)
T 2ffj_A 269 LKPIAFLLTAKCEPVARDI-GVNVGDMVAKV 298 (300)
T ss_dssp CCSEEEEEECCSHHHHHHH-TSCTTCEEEEE
T ss_pred CcchHHHHHhCCHHHHHHh-CCCCCCeEEEe
Confidence 789999999999999997 99999999986
No 6
>3pt1_A UPF0364 protein YMR027W; alpha/beta fold, carbohydrate phosphatase, F6P binding, HYDR; HET: F6P; 1.77A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-30 Score=291.18 Aligned_cols=263 Identities=19% Similarity=0.158 Sum_probs=181.9
Q ss_pred hhhhhHHHHHHHHHH------HcCCCcccHHHHHHHHHHHHHhHHHHH-------HHHhc---C-----C--hHHHHHHH
Q 042742 537 LGLANLLELREECLR------EFQFLDAYRSIKQRENEASLAVLPDLL-------VELDS---M-----S--KETRLLML 593 (834)
Q Consensus 537 ~~~r~l~~l~~~~l~------~~g~~DPy~~~K~~~N~~Al~~l~~l~-------~~ld~---~-----~--~~~~l~~l 593 (834)
+++-..|=|+|.+.. .+..+|||..+|+.....+...+.++. +.++. - + ..+.|..+
T Consensus 106 pWL~aEcYlYRri~~~f~~s~~~~~~D~F~~qK~~~f~~s~~av~~La~~~~~l~~~~~~~~~~~~~~~~~~~~~~f~~~ 185 (471)
T 3pt1_A 106 EWLFSEVYLYRRVNVLFQRQCEWAKFDIFNRLKQSTFESSFYGVVELALRYENLLPQLREMKQNPGNEIDDILKVLFKEF 185 (471)
T ss_dssp BHHHHHHHHHHHHHHHHHHSTTTTTCCTTHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHccCCCCcCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHH
Confidence 444444445555443 357789999999999987766433332 22210 0 1 14678999
Q ss_pred HHHhhccccccccccccccccccchHHHHHHHHHhhcCCCcccCCHHHHHHHHhcCCCCCCCCCceEEEEecCCCchhhh
Q 042742 594 IEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGSGDNKPRPHKRALLFVDNSGADVVL 673 (834)
Q Consensus 594 ik~alaGNi~Dlg~~~~~d~~~~~~l~~~~~~~~~~l~r~w~vDd~d~~~~~L~~~~~~~~~~~k~vl~~~DNAG~EIV~ 673 (834)
++++||||.+|+|+.......+...++ ..++++.++.++++||++++|+.|.++...++...++|+||+||||+|+|+
T Consensus 186 l~isLWGN~~DLsl~~~~~~~~~~~~~--~~~~~~~~~~~ilvdD~~~l~~~L~~~k~~~~~~~~rVdiVlDNaGfEl~~ 263 (471)
T 3pt1_A 186 IEISLWGNATDLSLLTNATLEDIKSIQ--GAKARAASESKIVVNDTEKAWEVLTKARADANSREIRVDFVLDNSGFELYA 263 (471)
T ss_dssp HHHHHHGGGCCHHHHTCCSHHHHHSHH--HHHHHHHHHTTEEEECHHHHHHHHHHHHHCSSCCCCEEEEECCBSTHHHHH
T ss_pred HHHHHHhhhhcccccCCcchHhhhhhh--hHHHHHHhhcCccccCHHHHHHHHHHhhccccCCCceEEEEEeCCcchhhH
Confidence 999999999999987543211001111 123456678999999999999999731100012346999999999999999
Q ss_pred chHHHHHHHHhCC--CEEEEEecCcc-ceeccchhhHHHHHHHHHhhC--h-------hHHHHHHhCCchhhhhhhccCC
Q 042742 674 GMLPLARELLRRG--TEVVLVANSLP-ALNDITAMELPDIVAEAAKHC--D-------ILRRAAEAGGLLVDAMINTLDG 741 (834)
Q Consensus 674 DllpLa~eLl~~G--~kVil~vK~~P-~iNDvT~~Dl~~ll~~la~~~--~-------~l~~A~~~G~~~~d~~~~~~~~ 741 (834)
|++ ||++|++.| .+|+||||+.| +|||||.+|+.|+|+.|+++. + ........| ..|..
T Consensus 264 Dl~-Lae~Ll~~gla~~V~~hvK~~PwfVSDvT~~D~~~~l~~L~~~~~~~~~~~~~~~~~~l~~lg-~~~~~------- 334 (471)
T 3pt1_A 264 DLM-LAAFLLQSGLATKCIFHAKDIPYMVSDVMLKDFDILVHDLRDREFFPSGEPSTKESRALDLFA-GEMEK------- 334 (471)
T ss_dssp HHH-HHHHHHHHTSCSEEEEEEBSSCCTTTBCBHHHHHHHHHHHHCTTTSCCCSTTSHHHHHHHHHH-HHHHH-------
T ss_pred HHH-HHHHHHHcCCCcEEEEEecCCCceeecCcHHHHHHHHHHHhccccccccccchhhHHHHHHHH-HHHHH-------
Confidence 999 999999987 69999999999 599999999999999999853 1 111111222 11221
Q ss_pred CCCCCCCcceEEEeCCCCCCCcCcccCC--------HHHHHHhccCcEEEEecCCCc----------ccccccccc----
Q 042742 742 SKENSPSVPLMVVENGCGSPCIDLRQVS--------SELAAAAKNADLIILEGMGRA----------LHTNFNARF---- 799 (834)
Q Consensus 742 ~~~~~~~~~l~Vi~sG~~~pgldL~~vS--------~el~~~l~~ADLVI~KGmgn~----------ihtN~ea~~---- 799 (834)
+++++++.+.++-.|+.+.++++++ |+|++.+++|+|||+||++|| --|-|....
T Consensus 335 ---~~~~G~~~~~~~~FWT~p~~y~~Mp~~~~~~~~p~L~~~L~~S~LVIFKGDLNYRKL~GD~~W~~tTpF~~al~~f~ 411 (471)
T 3pt1_A 335 ---FVSSGKIEFREDSFWTTELDYWNLDANETKYHGSILHKDLQKSNLVIFKGDLNYRKLTGDRKWPRTTKWETAIGPLA 411 (471)
T ss_dssp ---HHHHTSEEEEECGGGGSSCCGGGSSTTCCSSSHHHHHHHHTTCSEEEEEHHHHHHHHHTTBCCCTTCCHHHHTGGGG
T ss_pred ---HHHCCCEEEeCCCccCCCcchhhCChhhcccCCHHHHHHHhhCcEEEEecchhhhhhccccCCCCCCCHHHHhcccC
Confidence 2344466777777766667777766 599999999999999999988 114444332
Q ss_pred --cccchhhhhccCHH
Q 042742 800 --KCEALKLAMVKNQR 813 (834)
Q Consensus 800 --~~~~l~L~~vKc~~ 813 (834)
.++++-|-.+|++.
T Consensus 412 p~~~~v~aLRT~Kadv 427 (471)
T 3pt1_A 412 TNGITSLSLRTCKADV 427 (471)
T ss_dssp TSSCCEEEEEECCSSC
T ss_pred CCCcceeeeeecccce
Confidence 26788888899874
No 7
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.73 E-value=1.3e-16 Score=169.57 Aligned_cols=241 Identities=16% Similarity=0.246 Sum_probs=168.5
Q ss_pred ceEEEEeccceeEEEEEeecCCCccchhhhhhhhhhccccCCCCcCCCCCCCeEEEeEee-----cCCHHHHHHHHHhcc
Q 042742 41 SHLALDIGGSLIKLVYFSRHEDQSIDDKRKKTIKERLGISNGNRRSYPILGGRLHFVKFE-----TTKISECLDFIHSKQ 115 (834)
Q Consensus 41 ~~~giDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~-----t~~i~~~l~fi~~~~ 115 (834)
..+|||+|||.||+|-++.... .++..+.+ ...+.++++-+.+.+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g~------------------------------i~~~~~~~~~~~~~~~~~~~l~~l~~~~ 53 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGKE------------------------------IVAKSLVAVGTGTSGPARSISEVLENAH 53 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTE------------------------------EEEEEEEECCSSCCHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceEEEEEEeCCCC------------------------------EEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 3699999999999999873210 01101111 122444555554323
Q ss_pred ccc---CcEEEeCCccccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEE
Q 042742 116 LHR---GGIHATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVN 192 (834)
Q Consensus 116 ~~~---~~i~~TGGGA~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVN 192 (834)
+.. ..|.+||+|...... ++. ..++|++|+.+|+.|+.+.. -.++.
T Consensus 54 ~~~~~i~~i~~TG~g~~~~~~-----~~~--~~v~Ei~ah~~ga~~~~~~~------------------------~~vid 102 (270)
T 1hux_A 54 MKKEDMAFTLATGYGRNSLEG-----IAD--KQMSELSCHAMGASFIWPNV------------------------HTVID 102 (270)
T ss_dssp CCGGGCSEEEEESTTTTTTTT-----TCS--EEECHHHHHHHHHHHHCTTC------------------------CEEEE
T ss_pred CChhHEEEEEEeCccccchhh-----cCC--CCcccHHHHHHHHHHhCCCC------------------------CEEEE
Confidence 321 348999998543332 233 45999999999999986521 14788
Q ss_pred cCCceE-EEEEcCC--CceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCcccccccccccccc
Q 042742 193 IGSGVS-MIKVDGD--GKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGKTISD 269 (834)
Q Consensus 193 IGSGvS-iikV~~~--~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK~~~~ 269 (834)
||.+++ ++.+++. .+|.+.+-|+.|+|.|+.-+.-++|. +++|+.++|.++.. ..+....|..|.+....
T Consensus 103 iGGqd~k~i~~~~g~v~~~~mn~~ca~GtG~~le~~a~~lg~-~~~el~~la~~~~~------p~~~~~~c~vfa~s~v~ 175 (270)
T 1hux_A 103 IGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANILEV-KVSDLAELGAKSTK------RVAISSTCTVFAESEVI 175 (270)
T ss_dssp EETTEEEEEEEETTEEEEEEEESSCCTTSHHHHHHHHHHHTC-CTTTHHHHHTTCCS------CCCCCCCSHHHHHHHHH
T ss_pred ECCCceEEEEEeCCceeeeccccccchhhHHHHHHHHHHhCC-CHHHHHHHHhhCCC------CCCcccccchhHhHHHH
Confidence 999999 8888653 15778888999999888777777786 69999999988653 24445567788775433
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCch
Q 042742 270 KKELADYRPEDISLSLLRMISYNIGQISYLNALRFGL-KRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGF 348 (834)
Q Consensus 270 ~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i-~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy 348 (834)
....++.+++||+++++..|++++..+ ++..++ ++|+++|+..+|+.+. +.++..+ +.++.++++++|
T Consensus 176 ~l~~~g~~~~di~~av~e~Va~~i~~~----~~~~~~~~~i~~~GG~a~n~~~~-~~~~~~l------g~~v~~p~~~~~ 244 (270)
T 1hux_A 176 SQLSKGTDKIDIIAGIHRSVASRVIGL----ANRVGIVKDVVMTGGVAQNYGVR-GALEEGL------GVEIKTSPLAQY 244 (270)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHH----HHTTCCCSSEEEESGGGGCHHHH-HHHHHHH------CSCEECCGGGGG
T ss_pred HHhhCCCCHHHHHHHHHHHHHHHHHHH----HhcCCCCCeEEEeCccccCHHHH-HHHHHHH------CCCeEeCCCcch
Confidence 333357889999999999999998655 345565 7799999988766544 4555544 567889999999
Q ss_pred hhHHHHHhcccc
Q 042742 349 LGALGAFMSYEK 360 (834)
Q Consensus 349 ~GAlGA~L~~~~ 360 (834)
.||+||++.+..
T Consensus 245 ~~AlGAAl~A~~ 256 (270)
T 1hux_A 245 NGALGAALYAYK 256 (270)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhHHHHHHHHHH
Confidence 999999998743
No 8
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.72 E-value=3.5e-16 Score=165.40 Aligned_cols=241 Identities=18% Similarity=0.226 Sum_probs=167.5
Q ss_pred ceEEEEeccceeEEEEEeecCCCccchhhhhhhhhhccccCCCCcCCCCCCCeEEEeEeecC-----CHHHHHHHHHhc-
Q 042742 41 SHLALDIGGSLIKLVYFSRHEDQSIDDKRKKTIKERLGISNGNRRSYPILGGRLHFVKFETT-----KISECLDFIHSK- 114 (834)
Q Consensus 41 ~~~giDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~-----~i~~~l~fi~~~- 114 (834)
..+|||+|+|.+|+|.++... ++.+..+.+. ...++++-+.+.
T Consensus 2 ~~lGID~GsT~tk~av~d~~~-------------------------------~il~~~~~~~g~~~e~a~~vl~~~~~~a 50 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGE-------------------------------DIVASETISSGTGTTGPSRVLEKLYGKT 50 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTT-------------------------------EEEEEEEESCCTTSSHHHHHHHHHHHHH
T ss_pred eEEEEEcCccEEEEEEEECCC-------------------------------eEEEEEEecCCCCHHHHHHHHHHHHHHC
Confidence 368999999999999987321 1222221111 112334433332
Q ss_pred cccc---CcEEEeCCccccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEE
Q 042742 115 QLHR---GGIHATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLV 191 (834)
Q Consensus 115 ~~~~---~~i~~TGGGA~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlV 191 (834)
+... ..+..||||..- ++..+..++|++|++.|+.++.+ ..+| +++
T Consensus 51 ~~~~~~~~~~a~t~~~~~a--------~~~~~~~Vne~~aha~a~~~~~~----------------------~~~~-vl~ 99 (276)
T 4ehu_A 51 GLAREDIKKVVVTGYGRMN--------YSDADKQISELSCHARGVNFIIP----------------------ETRT-IID 99 (276)
T ss_dssp CCCGGGEEEEEEESTTGGG--------CCSCSEECCHHHHHHHHHHHHST----------------------TCCE-EEE
T ss_pred CCcchhccccccCchHHHH--------hhCCCcccchHHHHHHHHHHhCC----------------------CCCe-EEE
Confidence 2222 237889988542 23356779999999999988743 2233 344
Q ss_pred EcCCceEEEEEcCCCceE---EecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCccccccccccccc
Q 042742 192 NIGSGVSMIKVDGDGKFE---RVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGKTIS 268 (834)
Q Consensus 192 NIGSGvSiikV~~~~~f~---RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK~~~ 268 (834)
-.|+|..++.+..++.++ ..+.|..|+|.|+.....+.|. +|++.-+++.++++ ..+.+..+.+|.+...
T Consensus 100 lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~-~~~~~~~~~~~a~~------~~~i~~~~~~f~~s~~ 172 (276)
T 4ehu_A 100 IGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEV-DVSELGSISMNSQN------EVSISSTCTVFAESEV 172 (276)
T ss_dssp ECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTC-CGGGHHHHHTTCSS------CCCCCCCSHHHHHHHH
T ss_pred EcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhcc-ChhhhHHHHhcCCC------CCCcCCccchhhhhHH
Confidence 466666677776555554 3356689999999888888884 58888888887765 2444567788887544
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCch
Q 042742 269 DKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGF 348 (834)
Q Consensus 269 ~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy 348 (834)
.....++.+++||++|+..+|..++..+ ..+..++++|+++|+..+|+.+.- .++... +.+++++.|++|
T Consensus 173 ~~~~~~~~~~~di~a~~~~~v~~~l~~~---~~~~~~~~~vvl~GGva~n~~lr~-~l~~~~------g~~~~~p~~p~~ 242 (276)
T 4ehu_A 173 ISHLSENAKIEDIVAGIHTSVAKRVSSL---VKRIGVQRNVVMVGGVARNSGIVR-AMAREI------NTEIIVPDIPQL 242 (276)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHH---HHHHCCCSSEEEESGGGGCHHHHH-HHHHHH------TSCEECCSSGGG
T ss_pred HHhhhccccHHHHHHHHHHHHHHHHHHH---HHhcccCCeEEEecCccchHHHHH-HHHHHH------CCCeeeCCCcch
Confidence 4334457899999999999999988765 457788899999999999987654 344333 678999999999
Q ss_pred hhHHHHHhcccc
Q 042742 349 LGALGAFMSYEK 360 (834)
Q Consensus 349 ~GAlGA~L~~~~ 360 (834)
.||+||+|.+.+
T Consensus 243 ~~A~GAAl~A~~ 254 (276)
T 4ehu_A 243 TGALGAALYAFD 254 (276)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
No 9
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=98.96 E-value=4.6e-08 Score=106.72 Aligned_cols=205 Identities=12% Similarity=0.069 Sum_probs=141.4
Q ss_pred EEE-eCCccc-------cchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEE
Q 042742 121 IHA-TGGGAY-------KFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVN 192 (834)
Q Consensus 121 i~~-TGGGA~-------k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVN 192 (834)
|.+ +|-|.+ .++.-+...+++++..+++++||+.++.| .+ ..+|.+|+-
T Consensus 72 Ia~~~GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~-~~----------------------~~~~~~l~v 128 (330)
T 2ivn_A 72 IAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FG----------------------VKDPVGLYV 128 (330)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG-GT----------------------CCSCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh-cC----------------------CCCCeEEEE
Confidence 554 677754 45666667788999999999999999887 42 124667777
Q ss_pred cCCceEEEEEcCCCceEEecccc-cCchhHHHHHHhhcCCCCH--HHHHHHhcCCCCC-CCCCCCCCccccccccccccc
Q 042742 193 IGSGVSMIKVDGDGKFERVSGTN-VGGGTYWGLGRLLTKCKSF--DELLELSQRGDNR-DHRHIGLSASTIASSFGKTIS 268 (834)
Q Consensus 193 IGSGvSiikV~~~~~f~RvgGts-iGGGTf~GL~~LLtg~~~f--deil~LA~~Gd~~-dy~~~GL~~d~iASsFGK~~~ 268 (834)
.|..+.++.++ .++|+.+|+|. .+-|.|+.-+..++|.... -++..||..|+.. +|+ ..++. .--+|..+..
T Consensus 129 ~GG~t~~i~~~-~~~~~~lg~t~dds~Gr~fD~vA~~LGl~~~~~~~le~lA~~g~~~~~~p-~~i~~--~~fsfs~l~~ 204 (330)
T 2ivn_A 129 SGGNTQVLALE-GGRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELP-YAVKG--MDLSFSGLLT 204 (330)
T ss_dssp CSSCEEEEEEE-TTEEEEEEEBSSSCHHHHHHHHHHHHTCCSCHHHHHHHHHHTCCSCCCCC-CCEET--TEECCHHHHH
T ss_pred cCCCceEEEEc-CCeEEEEEeecCchhHHHHHHHHHHhCCCCCcHHHHHHHhhcCCCcCCCC-cccCC--CeEehHHHHH
Confidence 77677788887 58999998773 6788899888888887522 3788899888751 122 11211 1123332211
Q ss_pred c--cccccC-CChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC
Q 042742 269 D--KKELAD-YRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH 345 (834)
Q Consensus 269 ~--~~~~~~-~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h 345 (834)
. ....++ .+++|||+++...+.+.+..++...++.+++++|+++|+...|..+...+... .. ..+.++++++.
T Consensus 205 ~v~~~~~~g~~~~~diAa~fq~~l~~~l~~~~~~~~~~~~~~~vvlsGGVa~N~~l~~~l~~~-l~---~~g~~v~~p~~ 280 (330)
T 2ivn_A 205 EAIRKYRSGKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIM-TE---DRGIKFFVPPY 280 (330)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHH-HH---HHTCEEECCCH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHHH-HH---HcCCEEEecCC
Confidence 0 000113 57999999999999999999999999999999999999999999877654332 21 11356766554
Q ss_pred --Cchhh-HHHHHh
Q 042742 346 --EGFLG-ALGAFM 356 (834)
Q Consensus 346 --~gy~G-AlGA~L 356 (834)
.+=.| +||++.
T Consensus 281 ~~~~D~G~~iG~a~ 294 (330)
T 2ivn_A 281 DLCRDNGAMIAYTG 294 (330)
T ss_dssp HHHSSCHHHHHHHH
T ss_pred CCCChhHHHHHHHH
Confidence 33334 667655
No 10
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.26 E-value=0.00015 Score=77.29 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..|+.++...+..+++.........+.+.|+++|++.....+ +..+...++.+.....++...+.+...|++||+....
T Consensus 212 ~~a~~~~~~~~~~La~~i~~l~~~~~p~~IvlgGgi~~~~~~-~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 212 AVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTF-IAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGSTTH-HHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccccHHH-HHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHH
Confidence 357788888888888887777888999999999999887554 4556666654444456788888999999999987654
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.15 E-value=0.00048 Score=73.62 Aligned_cols=82 Identities=10% Similarity=0.132 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhcc----CCCceEeeccCCchhhHHHH
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWS----KGEAQAMFLRHEGFLGALGA 354 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws----~g~~~a~Fl~h~gy~GAlGA 354 (834)
...|+.++.-.+..++......+...+.+.|+++|++....+.-...+...++-+. ....++.+.+.+...+++||
T Consensus 236 d~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GA 315 (326)
T 2qm1_A 236 DHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGA 315 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHH
Confidence 35678888888999988888888888999999999998755544444544443211 12467777788889999999
Q ss_pred Hhcccc
Q 042742 355 FMSYEK 360 (834)
Q Consensus 355 ~L~~~~ 360 (834)
+....+
T Consensus 316 a~l~~~ 321 (326)
T 2qm1_A 316 ASLALQ 321 (326)
T ss_dssp HHHGGG
T ss_pred HHHHHH
Confidence 876543
No 12
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.14 E-value=0.00026 Score=76.25 Aligned_cols=80 Identities=18% Similarity=0.124 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-hc----cCCCceEeeccCCchhhHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-FW----SKGEAQAMFLRHEGFLGALGA 354 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-fw----s~g~~~a~Fl~h~gy~GAlGA 354 (834)
..|+.++...+..++......+...+.+.|+++|++....++-+..+...++ +. .....++.+-+.+...|++||
T Consensus 227 ~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GA 306 (321)
T 3vgl_A 227 PVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGA 306 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHH
Confidence 4577888999999998888888899999999999998876664545554444 21 123568888888999999999
Q ss_pred Hhccc
Q 042742 355 FMSYE 359 (834)
Q Consensus 355 ~L~~~ 359 (834)
+....
T Consensus 307 a~l~~ 311 (321)
T 3vgl_A 307 ADLAR 311 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 13
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=98.13 E-value=0.0005 Score=72.66 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-hc-c--C--CCceEeeccCCchhhHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-FW-S--K--GEAQAMFLRHEGFLGALG 353 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-fw-s--~--g~~~a~Fl~h~gy~GAlG 353 (834)
..|..++.-.+..++......+...+.+.|+++|++.....+ +..+...++ +. . . ...++.+.+.+...+++|
T Consensus 202 ~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgG~i~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~G 280 (292)
T 2gup_A 202 ILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSISQNPDF-IQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYG 280 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCHHH-HHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccccchHH-HHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHH
Confidence 467788888888888888888888899999999998654333 333433332 21 1 1 346777778889999999
Q ss_pred HHhccc
Q 042742 354 AFMSYE 359 (834)
Q Consensus 354 A~L~~~ 359 (834)
|+....
T Consensus 281 Aa~~~~ 286 (292)
T 2gup_A 281 ALVNWL 286 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987653
No 14
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.08 E-value=0.00027 Score=76.43 Aligned_cols=194 Identities=11% Similarity=0.049 Sum_probs=110.4
Q ss_pred cchhHHHHHhC---CCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCceEEEEEcCCC
Q 042742 130 KFADLFKERLG---VSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDG 206 (834)
Q Consensus 130 k~~~~~~~~lg---i~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSiikV~~~~ 206 (834)
.+.+.+++.++ +++.-.+...|...| .+ . ..+++|.+|+|+--..++.++
T Consensus 89 ~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~------------------------~~~v~v~~GTGig~~~v~~~G 141 (347)
T 2ch5_A 89 ILIEELRDRFPYLSESYLITTDAAGSIAT-AT--P------------------------DGGVVLISGTGSNCRLINPDG 141 (347)
T ss_dssp HHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--S------------------------SCEEEEEESSSEEEEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--C------------------------CCcEEEEEcCCceeEEEcCCC
Confidence 45567788886 888899999999888 21 1 126788889999876776556
Q ss_pred ceEEecc--cc---cCchhHHHHHHhhc------CCCC-------HHHHHHHhcCC--CC-----CCCCCCCCCcccccc
Q 042742 207 KFERVSG--TN---VGGGTYWGLGRLLT------KCKS-------FDELLELSQRG--DN-----RDHRHIGLSASTIAS 261 (834)
Q Consensus 207 ~f~RvgG--ts---iGGGTf~GL~~LLt------g~~~-------fdeil~LA~~G--d~-----~dy~~~GL~~d~iAS 261 (834)
..-+.|| |. -|+|+..|.-.+.. |..+ +.+.+. ...| +. .-|. +.+...+++
T Consensus 142 ~~c~cG~~G~l~~de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~-~~~g~~~~~~~~~~~~~--~~~~~~~~~ 218 (347)
T 2ch5_A 142 SESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMF-HYFQVPDRLGILTHLYR--DFDKCRFAG 218 (347)
T ss_dssp CEEEEECCCTTTCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHH-HHHTCSSHHHHHTTTTT--TCCHHHHHT
T ss_pred CEEecCCcCcccCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHH-HHhCCCCHHHHHHHHhc--CCcHHHHHH
Confidence 6667764 55 34455555433221 0000 111110 0001 00 0011 011112221
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------EEEEecccccCcchhHHHHHHHHhhc
Q 042742 262 SFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLK--------RIFFGGFFIRGHAYTMDTISFAVQFW 333 (834)
Q Consensus 262 sFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~--------~I~f~G~fi~~~~~~m~~ls~ai~fw 333 (834)
..-.+...-. .....|+.++.-.+..++......+...+.+ .|+++|++....+.-+..+...++-.
T Consensus 219 ~~~~v~~~a~-----~gD~~a~~il~~~~~~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~ 293 (347)
T 2ch5_A 219 FCRKIAEGAQ-----QGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQG 293 (347)
T ss_dssp THHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----cCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhh
Confidence 1111110000 1235788899999999999888888888888 99999999876554444444444311
Q ss_pred -----cCCCceEeeccCCchhhHHHHHhccc
Q 042742 334 -----SKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 334 -----s~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
.....++.+...+. .+++||+....
T Consensus 294 ~~~~~~~~~~~i~~~~~~~-a~~~GAa~la~ 323 (347)
T 2ch5_A 294 REIQAQNFFSSFTLMKLRH-SSALGGASLGA 323 (347)
T ss_dssp C---CCCSCSEEEEEEESS-CTHHHHHHHHH
T ss_pred ccccccccCCceEEEecCC-ChHHHHHHHHH
Confidence 11235666667777 99999987653
No 15
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.07 E-value=0.00047 Score=74.25 Aligned_cols=79 Identities=19% Similarity=0.122 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-hc---cCCCceEeeccCCchhhHHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-FW---SKGEAQAMFLRHEGFLGALGAF 355 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-fw---s~g~~~a~Fl~h~gy~GAlGA~ 355 (834)
..|+.++...+..++......+...+.+.|+++|.+.+..++-+..+...++ +. .....++.+-+.+...+++||+
T Consensus 235 ~~a~~~~~~~~~~La~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa 314 (321)
T 3r8e_A 235 ALALAVWADIGTIIGESLVNIVRVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAA 314 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHH
Confidence 4677888999999998888888899999999999998775554444544443 11 1235788899999999999998
Q ss_pred hcc
Q 042742 356 MSY 358 (834)
Q Consensus 356 L~~ 358 (834)
...
T Consensus 315 ~l~ 317 (321)
T 3r8e_A 315 GLI 317 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 16
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.06 E-value=0.00043 Score=72.97 Aligned_cols=78 Identities=9% Similarity=-0.029 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhc-cCCCceEeeccCCchhhHHHHHhcc
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFW-SKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw-s~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
..|+.++.-.+..++......+...+.+.|+++|.+... +.-...+...++-+ .....++.+.+.+...+++||+...
T Consensus 208 ~~a~~i~~~~~~~L~~~i~~l~~~l~p~~ivlgG~~~~~-~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 208 EQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLA-EGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEHHHHTS-TTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccccc-HHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 467778888888888888888888899999999998844 33333444444321 1124577788889999999998754
No 17
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=98.01 E-value=0.00025 Score=78.62 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhc
Q 042742 280 DISLSLLRMISYNIGQISYLNALRF--GLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~--~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
..|+.++...+..+++.....+... +.+.|||+|+...+.++-...+...+..+. ...+..-..+.-.+++||+..
T Consensus 268 ~~a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~--~~~i~~~~~~~~a~~~GAa~l 345 (381)
T 1saz_A 268 EWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIA--PVLVFPGSNEEKALALSALRV 345 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTS--CEEEEEBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhc--CeEEEecCcchhHHHHHHHHH
Confidence 4678899999999999888888888 899999999998887644555666665442 344555555557999999876
Q ss_pred cc
Q 042742 358 YE 359 (834)
Q Consensus 358 ~~ 359 (834)
..
T Consensus 346 ~~ 347 (381)
T 1saz_A 346 LR 347 (381)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 18
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.98 E-value=0.0012 Score=71.41 Aligned_cols=78 Identities=9% Similarity=-0.067 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhc---cCCCceEeeccCCchhhHHHHHh
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFW---SKGEAQAMFLRHEGFLGALGAFM 356 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw---s~g~~~a~Fl~h~gy~GAlGA~L 356 (834)
..|..++...+..++......+...+.+.||++|.+.....+ +..+...++=+ .....++..-+.+...+++||+.
T Consensus 244 ~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~~~~l-~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~ 322 (327)
T 4db3_A 244 EKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSNFELI-YEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCTHH-HHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccchHHH-HHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHH
Confidence 357778888899999888888889999999999998876544 33444444321 12356788888899999999987
Q ss_pred cc
Q 042742 357 SY 358 (834)
Q Consensus 357 ~~ 358 (834)
..
T Consensus 323 l~ 324 (327)
T 4db3_A 323 LN 324 (327)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 19
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.92 E-value=0.0014 Score=68.28 Aligned_cols=129 Identities=12% Similarity=0.148 Sum_probs=85.8
Q ss_pred EEEEEcCCceE-EEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCccccccccccc
Q 042742 188 YLLVNIGSGVS-MIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGKT 266 (834)
Q Consensus 188 yLlVNIGSGvS-iikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK~ 266 (834)
.++|.||.|++ +..+.. +.......+.+||+.|--......+ .++++.-++..+-. .
T Consensus 141 ~~viDiGggst~~~~~~~-g~~~~~~~~~~Gg~~~~~~l~~~l~-~~~~~ae~~k~~~~-------------------~- 198 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEK-GKITATFDEPTGGTHLSLVLAGSYK-IPFEEAETIKKDFS-------------------R- 198 (272)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEECCBSCCHHHHHHHHHHHHT-CCHHHHHHHHHSST-------------------T-
T ss_pred EEEEEECCCcEEEEEEEC-CEEEEEecCCCcHHHHHHHHHHHhC-CCHHHHHHHHHhcC-------------------C-
Confidence 48999999998 555554 5677778889999999776655555 34666554433310 0
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC
Q 042742 267 ISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG-LKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH 345 (834)
Q Consensus 267 ~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~-i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h 345 (834)
....+++++.++.-+...|-+. -+..+ +++|+++|+..+.+.+... ++..+ +.++....+
T Consensus 199 --------~~~~~~~~~~~~~~i~~~i~~~----l~~~~~~~~ivL~GG~a~~~~l~~~-l~~~l------~~~v~~~~~ 259 (272)
T 3h1q_A 199 --------HREIMRVVRPVIEKMALIVKEV----IKNYDQTLPVYVVGGTAYLTGFSEE-FSRFL------GKEVQVPIH 259 (272)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHH----TTTSCSSCCEEEESGGGGSTTHHHH-HHHHH------SSCCBCCSS
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHH----HHhcCCCCEEEEECCccchhhHHHH-HHHHh------CCCccccCC
Confidence 0123455555555555444443 34556 7899999999988876553 44433 456666789
Q ss_pred CchhhHHHHHhc
Q 042742 346 EGFLGALGAFMS 357 (834)
Q Consensus 346 ~gy~GAlGA~L~ 357 (834)
+.|++|+||++.
T Consensus 260 p~~a~a~Gaal~ 271 (272)
T 3h1q_A 260 PLLVTPLGIALF 271 (272)
T ss_dssp GGGHHHHHHHTT
T ss_pred hHHHHHHHHHhc
Confidence 999999999985
No 20
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.91 E-value=0.0013 Score=73.59 Aligned_cols=79 Identities=10% Similarity=0.150 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhcc----CCCceEeeccCCchhhHHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWS----KGEAQAMFLRHEGFLGALGAF 355 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws----~g~~~a~Fl~h~gy~GAlGA~ 355 (834)
..|..++.-.+..++......+...+.+.||++|.+....+.-...+...++-.. ....++.+.+.+.. +++||+
T Consensus 332 ~~a~~il~~~~~~L~~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa 410 (429)
T 1z05_A 332 PLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGA 410 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHH
Confidence 3577888888888888888888888999999999998765544444444443111 12567777778888 999998
Q ss_pred hccc
Q 042742 356 MSYE 359 (834)
Q Consensus 356 L~~~ 359 (834)
....
T Consensus 411 ~l~~ 414 (429)
T 1z05_A 411 ALIK 414 (429)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 21
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.89 E-value=0.00076 Score=71.46 Aligned_cols=74 Identities=9% Similarity=0.100 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
...|+.++.-.+..++......+...+...|+++|++... +.-+..+...+.-+ ++...+ +...+++||++..
T Consensus 213 d~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgGgv~~~-~~~~~~l~~~~~~~-----~i~~~~-~~~~~~~GAa~la 285 (299)
T 2e2o_A 213 DTVAMDILKQGAELLASQAVYLARKIGTNKVYLKGGMFRS-NIYHKFFTLYLEKE-----GIISDL-GKRSPEIGAVILA 285 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGS-HHHHHHHHHHHHHT-----TCEEEC-CSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCccCc-HHHHHHHHHHCCCC-----eEeccC-CCCChHHHHHHHH
Confidence 3568889999999999888888888899999999999887 44444454444222 455566 7788999998765
Q ss_pred c
Q 042742 359 E 359 (834)
Q Consensus 359 ~ 359 (834)
.
T Consensus 286 ~ 286 (299)
T 2e2o_A 286 Y 286 (299)
T ss_dssp H
T ss_pred H
Confidence 3
No 22
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=97.88 E-value=0.00067 Score=74.10 Aligned_cols=196 Identities=12% Similarity=0.040 Sum_probs=132.2
Q ss_pred chhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCceEEEEEcCCCceEE
Q 042742 131 FADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKFER 210 (834)
Q Consensus 131 ~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSiikV~~~~~f~R 210 (834)
++.-+...+++++.-++-+++|+.-+.+... ..+|..|+--|.|++++.+++ ++|+.
T Consensus 95 ~ak~La~~~~~Pl~~v~hl~aHa~sa~~~s~----------------------~~~pl~L~vsGg~t~l~~~~~-~~~~~ 151 (334)
T 3eno_A 95 AARTISVLTGKPIIGVNHPLGHIEIGRRVTG----------------------AIDPVMLYVSGGNTQVIAHVN-GRYRV 151 (334)
T ss_dssp HHHHHHHHHTCCCEEECHHHHHHHHHHHHHT----------------------CSSCEEEEESSSCEEEEEECS-SBEEE
T ss_pred HHHHHhhccCCCeEEeccHHHHHHHHHhcCC----------------------CCCCEEEEEECCCcEEEEEeC-CEEEE
Confidence 3444556678999999999999988765432 125666776788888888875 89999
Q ss_pred eccc-ccCchhHHHHHHhhcCCCCH---HHHHHHhcCCCCCCCCCCCCCccccccccccccc--ccccccCCChhHHHHH
Q 042742 211 VSGT-NVGGGTYWGLGRLLTKCKSF---DELLELSQRGDNRDHRHIGLSASTIASSFGKTIS--DKKELADYRPEDISLS 284 (834)
Q Consensus 211 vgGt-siGGGTf~GL~~LLtg~~~f---deil~LA~~Gd~~dy~~~GL~~d~iASsFGK~~~--~~~~~~~~~~eDia~S 284 (834)
+|.| -..-|.++--...++|.. | -++..||.+|+. .|. +..+.+..--||--+.. .....++.+++|||++
T Consensus 152 lg~t~d~S~G~~fD~vA~~LGl~-y~g~~~le~lA~~g~~-~~~-~~~~~~~~~~sfsgl~~~v~~~l~~g~~~~diAas 228 (334)
T 3eno_A 152 LGETLDIGIGNMIDKFAREAGIP-FPGGPEIEKLAMKGTK-LLD-LPYSVKGMDTAFSGILTAALQYLKTGQAIEDISYS 228 (334)
T ss_dssp EEEBSSCCHHHHHHHHHTTTTCC-SCHHHHHHTTGGGCCS-CCC-CCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred eccCCCccHHHHHHHHHHHcCCC-CCCHHHHHHHHhcCCC-CCC-CceeccCceEchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9987 466678887777777865 4 367788988875 221 11111101111211110 0001124679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC--Cchh-hHHHHHh
Q 042742 285 LLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH--EGFL-GALGAFM 356 (834)
Q Consensus 285 Ll~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h--~gy~-GAlGA~L 356 (834)
+...+.+.+..++...++.+++++|+++|+...|..+...+.. ...+ .+.++++++. .+=. .+||++.
T Consensus 229 fq~~l~~~l~~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L~~-~l~~---~g~~v~~p~~~~~~D~G~~iG~a~ 299 (334)
T 3eno_A 229 IQETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTN-MARE---AGIRSYLTDREYCMDNGIMIAQAA 299 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEEESSGGGCHHHHHHHHH-HHHH---HTSEEECCCTTTTSCCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEcCCHHHHHHHHHHHHH-HHHH---cCCEEEecCCCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999987765433 3322 2467776655 2222 3467654
No 23
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.85 E-value=0.0016 Score=69.90 Aligned_cols=78 Identities=12% Similarity=-0.071 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhc---cCCCceEeeccCCchhhHHHHHh
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFW---SKGEAQAMFLRHEGFLGALGAFM 356 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw---s~g~~~a~Fl~h~gy~GAlGA~L 356 (834)
..|..++...+..+++.....+...+.+.|+++|++....++-.. +...++-+ .....++.+.+.+...+++||+.
T Consensus 244 ~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~ 322 (327)
T 2ap1_A 244 EQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHH
Confidence 467788888888888888888888899999999998876544332 32222211 12356777788889999999987
Q ss_pred cc
Q 042742 357 SY 358 (834)
Q Consensus 357 ~~ 358 (834)
.+
T Consensus 323 la 324 (327)
T 2ap1_A 323 LH 324 (327)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 24
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.79 E-value=0.0025 Score=68.10 Aligned_cols=79 Identities=14% Similarity=0.001 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccc-cCcchhHHHHHHHHhhc--cCCCceEeeccCCchhhHHHHHhc
Q 042742 281 ISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFI-RGHAYTMDTISFAVQFW--SKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 281 ia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi-~~~~~~m~~ls~ai~fw--s~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
.|+.++...+..++..........+.+.|+++|.+. ...+.-+..+...++-+ .....++.+-+.+...+++||+..
T Consensus 213 ~a~~~~~~~~~~l~~~i~~l~~~~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l 292 (302)
T 3vov_A 213 KAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALT 292 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHH
Confidence 577788888888888888888889999999999998 77665555555444421 112234677788899999999876
Q ss_pred cc
Q 042742 358 YE 359 (834)
Q Consensus 358 ~~ 359 (834)
..
T Consensus 293 ~~ 294 (302)
T 3vov_A 293 AY 294 (302)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 25
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.78 E-value=0.0019 Score=71.62 Aligned_cols=79 Identities=11% Similarity=0.105 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhcc----CCCceEeeccCCchhhHHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWS----KGEAQAMFLRHEGFLGALGAF 355 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws----~g~~~a~Fl~h~gy~GAlGA~ 355 (834)
..|..++.-.+..++......+...+.+.||++|.+....+.-+..+...++-+. ....++...+.+...+++||+
T Consensus 309 ~~a~~~l~~~~~~L~~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa 388 (406)
T 1z6r_A 309 LLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAA 388 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHH
Confidence 4577788888888888888788888999999999998765544444444443211 124677777888999999997
Q ss_pred hcc
Q 042742 356 MSY 358 (834)
Q Consensus 356 L~~ 358 (834)
+..
T Consensus 389 ~~~ 391 (406)
T 1z6r_A 389 LVK 391 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 743
No 26
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.65 E-value=0.0034 Score=69.15 Aligned_cols=80 Identities=19% Similarity=0.135 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhc--cCCCceEeeccCCchhhHHHHHhc
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFW--SKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw--s~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
..|..++.-.+..++......+...+.+.|+++|.+....+.-+..+...++-+ .....++.+.+.+...+++||+..
T Consensus 289 ~~a~~~l~~~~~~La~~i~~l~~~ldP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 368 (380)
T 2hoe_A 289 VRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVH 368 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHH
Confidence 467788888888888888777888899999999999876554444454444322 113567777788889999999876
Q ss_pred cc
Q 042742 358 YE 359 (834)
Q Consensus 358 ~~ 359 (834)
..
T Consensus 369 ~~ 370 (380)
T 2hoe_A 369 AL 370 (380)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 27
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.24 E-value=0.027 Score=61.79 Aligned_cols=78 Identities=5% Similarity=-0.011 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc-cccCcchhHH--HHHHHHh--hccC--------CCceEeeccCC
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGF-FIRGHAYTMD--TISFAVQ--FWSK--------GEAQAMFLRHE 346 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~-fi~~~~~~m~--~ls~ai~--fws~--------g~~~a~Fl~h~ 346 (834)
..|+.++...+..++......+...+.+.||++|+ +.+...+ +. .+...++ +... ...++.....+
T Consensus 279 ~~a~~~l~~~~~~L~~~i~~l~~~l~p~~IvlgGG~~~~~~~~-~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (373)
T 2q2r_A 279 ANACKAMKKYHEYLMRVGSEASMALLPLTIVLVGDNIVNNAFF-YRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKL 357 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECSHHHHHTHHH-HHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCChHhCchhh-hcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecC
Confidence 46888999999999999998899999999999776 5555332 22 2212221 2222 14566666788
Q ss_pred chhhHHHHHhcc
Q 042742 347 GFLGALGAFMSY 358 (834)
Q Consensus 347 gy~GAlGA~L~~ 358 (834)
..+|++||+...
T Consensus 358 ~~a~l~GAa~l~ 369 (373)
T 2q2r_A 358 LNLNLMGCYRCG 369 (373)
T ss_dssp CCHHHHHHHHHH
T ss_pred CchhHHHHHHHH
Confidence 899999998754
No 28
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.18 E-value=0.056 Score=58.32 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-h--ccCCCceEeeccCCchhhHHHHH
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-F--WSKGEAQAMFLRHEGFLGALGAF 355 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-f--ws~g~~~a~Fl~h~gy~GAlGA~ 355 (834)
...|+.++.-.+..+++.....+...+.+.|+++|.... .+ ...+...++ + ......++.+...+. .+++||+
T Consensus 258 d~~a~~il~~~~~~La~~i~~l~~~l~P~~IvlgG~i~~--~~-~~~l~~~l~~~~~~~~~~~~i~~s~~~~-~~~~GAa 333 (343)
T 2yhw_A 258 NAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLAS--HY-IHIVKDVIRQQALSSVQDVDVVVSDLVD-PALLGAA 333 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEESTTHH--HH-HHHHHHHHHHHSCGGGTTCEEEECCCSC-HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcHH--HH-HHHHHHHHHHhcccccCCcEEEEccCCC-chHHHHH
Confidence 346788899999999998888888999999999998752 22 222222222 1 112245666666654 6899998
Q ss_pred hcc
Q 042742 356 MSY 358 (834)
Q Consensus 356 L~~ 358 (834)
...
T Consensus 334 ~l~ 336 (343)
T 2yhw_A 334 SMV 336 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 29
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.04 E-value=0.026 Score=60.45 Aligned_cols=76 Identities=20% Similarity=0.210 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-hc----cCCCceEeeccCCchhhHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-FW----SKGEAQAMFLRHEGFLGALGA 354 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-fw----s~g~~~a~Fl~h~gy~GAlGA 354 (834)
..+..++...+..|+.+ ....+.+.||++|.+.....+-...+...++ +. .....+..+-+.+...|++||
T Consensus 218 ~~~~~~~~~~a~~la~l----~~~~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GA 293 (310)
T 3htv_A 218 PFVQSLLENAARAIATS----INLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGA 293 (310)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH----HHhhCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHH
Confidence 35666677666666555 3478899999999998876543333333332 22 234578888899999999999
Q ss_pred Hhccc
Q 042742 355 FMSYE 359 (834)
Q Consensus 355 ~L~~~ 359 (834)
+....
T Consensus 294 a~la~ 298 (310)
T 3htv_A 294 AILAH 298 (310)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
No 30
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=96.95 E-value=0.016 Score=66.92 Aligned_cols=184 Identities=12% Similarity=0.042 Sum_probs=122.0
Q ss_pred hhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCceEEEEEcCCCceEEe
Q 042742 132 ADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKFERV 211 (834)
Q Consensus 132 ~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSiikV~~~~~f~Rv 211 (834)
+.-+...+++++.-++.+++|+..+.+-. ...+|..|+--|..+.++.+++ ++|+++
T Consensus 95 ak~la~~~~~p~~~v~h~~aH~~~~~~~~----------------------~~~~p~~l~vsGg~t~~~~~~~-~~~~~l 151 (540)
T 3en9_A 95 ARTLSLTLKKPIIGVNHCIAHIEIGKLTT----------------------EAEDPLTLYVSGGNTQVIAYVS-KKYRVF 151 (540)
T ss_dssp HHHHHHHHTCCEEEEEHHHHHHHHHHHHS----------------------SCSSCEEEEECSSCEEEEEEET-TEEEEE
T ss_pred HHHHHHHhCCCeeEeccHHHHHHHHHHhc----------------------CCCCCcEEEEcCCCcEEEEEeC-CceEEE
Confidence 44466678999999999999998866432 1235655555666666888886 789999
Q ss_pred ccc-ccCchhHHHHHHhhcCCC--CHHHHHHHhcCCCCCCCCCCCCCcccccccccccccc--cccccCCChhHHHHHHH
Q 042742 212 SGT-NVGGGTYWGLGRLLTKCK--SFDELLELSQRGDNRDHRHIGLSASTIASSFGKTISD--KKELADYRPEDISLSLL 286 (834)
Q Consensus 212 gGt-siGGGTf~GL~~LLtg~~--~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK~~~~--~~~~~~~~~eDia~SLl 286 (834)
|.| -..-|-++-=...++|.. .=-.|-.||++|+. .+ .+..+.....-||--+.+. ....++.+.+|||+|..
T Consensus 152 g~t~d~s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~~-~~-~~p~~~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq 229 (540)
T 3en9_A 152 GETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKK-LV-DLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQ 229 (540)
T ss_dssp EEBSSSCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCCC-CC-CCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred eeccchHhHHHHHHHHHHcCCCCCCHHHHHHHHHcCCc-cC-cCCCCCCCcceecHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 987 355666665555555653 11477888999973 11 1111111111222211100 01112457899999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeecc
Q 042742 287 RMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLR 344 (834)
Q Consensus 287 ~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~ 344 (834)
..+...+...+..+++.+++++|+++|+...|..+...+....- ..+.++++++
T Consensus 230 ~~~~~~l~~~~~~a~~~~~~~~~~~~GGVa~N~~l~~~l~~~~~----~~~~~~~~p~ 283 (540)
T 3en9_A 230 EYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCE----GQNVDFYVPP 283 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHHHHH----HTTCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeCcHHhHHHHHHHHHHHHH----hcCCEEEeCC
Confidence 99999999999999999999999999999999988765443222 2356776654
No 31
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.88 E-value=0.047 Score=58.83 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEecccccC-cchhH-HHHHHHH------hhccCCCceEeeccCCchhh
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKR-IFFGGFFIRG-HAYTM-DTISFAV------QFWSKGEAQAMFLRHEGFLG 350 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~-I~f~G~fi~~-~~~~m-~~ls~ai------~fws~g~~~a~Fl~h~gy~G 350 (834)
..|..++...+..+|+.....+...+.+. ||++|+.... .++-. ..+...+ ..+.. ...+... .+...|
T Consensus 239 ~~A~~~~~~~~~~Lg~~i~~l~~~l~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~i~~~-~~~~a~ 316 (332)
T 1sz2_A 239 TDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVH-DIPVYLI-VHDNPG 316 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHT-TCCEEEE-CCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHh-CceEEEE-ECCchh
Confidence 46888999999999999888899999997 9999998764 22211 1111122 11111 2333333 477899
Q ss_pred HHHHHhcc
Q 042742 351 ALGAFMSY 358 (834)
Q Consensus 351 AlGA~L~~ 358 (834)
.+||+...
T Consensus 317 l~GAa~l~ 324 (332)
T 1sz2_A 317 LLGSGAHL 324 (332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 32
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=96.82 E-value=0.084 Score=56.39 Aligned_cols=248 Identities=16% Similarity=0.175 Sum_probs=129.4
Q ss_pred ceEEEEeccceeEEEEEeecCCCccchhhhhhhhhhccccCCCCcCCCCCCCeEEEeEeecCCHHHHHHHHHh----ccc
Q 042742 41 SHLALDIGGSLIKLVYFSRHEDQSIDDKRKKTIKERLGISNGNRRSYPILGGRLHFVKFETTKISECLDFIHS----KQL 116 (834)
Q Consensus 41 ~~~giDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~l~fi~~----~~~ 116 (834)
..+|||||||-+|++-++.. +..+.-.++++..-+++++-+.+ ..+
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~------------------------------G~il~~~~~~t~~~~~~l~~i~~~~~~~~i 53 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGRED------------------------------GTIIDRIEFPTXMPDETIEXVIQYFSQFSL 53 (302)
T ss_dssp CEEEEEECSSEEEEEEECTT------------------------------SCEEEEEEEECCCHHHHHHHHHHHHTTSCC
T ss_pred EEEEEEECcceeEEEEEECC------------------------------CcEEEEEEecCCChHHHHHHHHHHhccCCc
Confidence 46899999999999987632 12344455666665555544433 211
Q ss_pred ccCcEEEeC-----------Cc----------cccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCce
Q 042742 117 HRGGIHATG-----------GG----------AYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQK 175 (834)
Q Consensus 117 ~~~~i~~TG-----------GG----------A~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~ 175 (834)
.--.|.+.| |- -+.+.+.|++.+++++.-.+...|...|-.++-.
T Consensus 54 ~gigi~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~-------------- 119 (302)
T 3epq_A 54 QAIGIGSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGE-------------- 119 (302)
T ss_dssp SEEEEEECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------
T ss_pred eEEEEEeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCC--------------
Confidence 110122211 11 1345677899999999999999999999776522
Q ss_pred eeeecCCCCCccEEEEEcCCceEE-EEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCC
Q 042742 176 EFVQIDTNDLFPYLLVNIGSGVSM-IKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGL 254 (834)
Q Consensus 176 ~~~~~~~~~~~PyLlVNIGSGvSi-ikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL 254 (834)
......++.|.+|+|+-- +-+++ +..| |... | .+.+.......-+. .+-...+.. |
T Consensus 120 ------~~~~~~~~~l~~GtGiG~gii~~G--~l~~--G~~a--g---EiGh~~v~~~~~~~------~~~~C~~~~-g- 176 (302)
T 3epq_A 120 ------AXGLDSCLYITIGTGIGAGAIVEG--RLLQ--GLSH--P---EMGHIYIRRHPDDV------YQGXCPYHG-D- 176 (302)
T ss_dssp ------TTTCSCEEEEEESSSEEEEEEETT--EECC--SSSC--C---CGGGCCCCCCTTCC------CCCSBTTTB-S-
T ss_pred ------CCCCCcEEEEEECCceEEEEEECC--EEcc--cCCC--C---ccceEEEecCCCCC------cCcccCCCC-c-
Confidence 122334889999999973 33343 3222 2221 1 22222211000000 000000000 0
Q ss_pred CcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHh-hc
Q 042742 255 SASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQ-FW 333 (834)
Q Consensus 255 ~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~-fw 333 (834)
.-++.||.-+=.........+.. -+..++...+..++..........+.+.||++|.+.....+ +..+...++ +.
T Consensus 177 clE~~~S~~al~~~~~~~~~~~~---~~~~~~~~~~~~La~~i~nl~~~ldPe~IviGGgi~~~~~l-~~~i~~~l~~~~ 252 (302)
T 3epq_A 177 CFEGLASGPAIEARWGXKAADLS---DIAQVWELEGYYIAQALAQYILILAPXXIILGGGVMQQXQV-FSYIYQYVPKIM 252 (302)
T ss_dssp SHHHHHSHHHHHHHHSSCGGGGT---TCHHHHHHHHHHHHHHHHHHHHHTCCSCEEEESSGGGCTHH-HHHHHHHHHHHH
T ss_pred chhhhCCHHHHHHHhhccccccc---chHHHHHHHHHHHHHHHHHHHHHHCchhhhcCchhhhhHHH-HHHHHHHHHHHH
Confidence 00111111000000000000000 02345666777777777777889999999999998876543 333333332 11
Q ss_pred c----C------CCceEeeccCCchhhHHHHHhccc
Q 042742 334 S----K------GEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 334 s----~------g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
. . ...++.+.+.+..+|++||+....
T Consensus 253 ~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 253 NSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp TTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred hhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 1 1 124577788899999999998654
No 33
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=96.79 E-value=0.011 Score=71.17 Aligned_cols=207 Identities=17% Similarity=0.118 Sum_probs=134.8
Q ss_pred eCCccccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCc--eE---
Q 042742 124 TGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSG--VS--- 198 (834)
Q Consensus 124 TGGGA~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSG--vS--- 198 (834)
-++-+.+|+..+...+|++++.+.-+.||+..+.+-.. -+..++|.+ -|+| .+
T Consensus 462 P~y~st~~Ak~lA~~~~iPli~VqHH~AHaaS~~~esg---------------------~~~~l~Lal-DGsG~G~dgti 519 (772)
T 4g9i_A 462 PAYNTTKLAMEMANELDVELLQVQHHYAHIASVMAEKN---------------------LDSVIGIAL-DGVGYGTDGNT 519 (772)
T ss_dssp TTCHHHHHHHHHHTTTTCCCCEECSHHHHTHHHHHHTT---------------------CCCCEEEEC-CSSEEETTTEE
T ss_pred CCcHHHHHHHHHHHhcCCCeeeehHHHHHHHHHHHhcC---------------------CCCeEEEEE-EEeCCCCCCeE
Confidence 37778889988888999999999999999988765421 111333333 3544 21
Q ss_pred ----EEEEcCCCceEEecccc----cC----chhHHHHHHh-hcCCCCHHHHHHHhcCCCCCCCCCC-------------
Q 042742 199 ----MIKVDGDGKFERVSGTN----VG----GGTYWGLGRL-LTKCKSFDELLELSQRGDNRDHRHI------------- 252 (834)
Q Consensus 199 ----iikV~~~~~f~RvgGts----iG----GGTf~GL~~L-Ltg~~~fdeil~LA~~Gd~~dy~~~------------- 252 (834)
++.++. ++|+|++.-. .| +--+|++... +++.-.++++.++++.++...|...
T Consensus 520 WgGE~L~~d~-~~~eRlg~l~~l~l~ggDaA~~~p~r~a~~ll~~~~G~~~i~~~~k~~~~a~~~~~~~~~~e~~~l~~~ 598 (772)
T 4g9i_A 520 WGGEVLYLGY-EDVERLAHIDYYPLPGGDLASYYPLRALMGILSKVYSIDELEGVINRCCPKAVESLKYGKVEFNVVLNQ 598 (772)
T ss_dssp EESEEEECCS-SSCEECCCBCCEEESSHHHHHHSTHHHHHHHHTTTSCHHHHHHHHTTSCCGGGTTSSSCSHHHHHTHHH
T ss_pred eeeEEEEecC-cceEEeeeeeecCcccchhhhhhHHHHHHHHHhhcCCchHHHHHHHhcChhhccCcccchHHHHHHHHH
Confidence 345554 6899998743 23 2356776654 4666778998888888775222110
Q ss_pred ---CCCcccccccccccccc--------------------------------------c--------------ccccCCC
Q 042742 253 ---GLSASTIASSFGKTISD--------------------------------------K--------------KELADYR 277 (834)
Q Consensus 253 ---GL~~d~iASsFGK~~~~--------------------------------------~--------------~~~~~~~ 277 (834)
|+.. ...||+|.++.. + ....+.+
T Consensus 599 l~~gin~-p~tSS~GRlFDavAallGl~~~~sYEGqaAm~LE~la~~~~~~~~~~~~~~~~~id~~~l~~~~~~~l~~~~ 677 (772)
T 4g9i_A 599 LAKGINT-AYASSTGRVLDAIAVLLNVAYRRHYEGEPAMKLESFAFKGKNDLKFEVPVEGELIRVEELFQSILEAIEGAS 677 (772)
T ss_dssp HHTTSSC-EEEEEHHHHHHHHHHSSSSCCSCCSSSCHHHHHHHHHHTCCSCCCCCCCCBTTBBCHHHHHHHHHHHHTTSC
T ss_pred HhcCCCC-ccccccchhhHHHHHHcCCcccccccchhhHHHHHhhhhcccccCCCcCccccccchHHHHHHHHhhhcCCC
Confidence 1111 122344432100 0 0012467
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC--Cchh-hHHHH
Q 042742 278 PEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH--EGFL-GALGA 354 (834)
Q Consensus 278 ~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h--~gy~-GAlGA 354 (834)
++|||++....+...+..++...++.+|+++|+++|+...|..+...+.. .....++++++++. .+=- -|||+
T Consensus 678 ~~dIAasfQ~al~~~L~~~~~~a~~~tg~~~VvLSGGVa~N~~L~~~l~~----~L~~~G~~v~~p~~vP~nDgGiALGQ 753 (772)
T 4g9i_A 678 PADIAYSAHLALARAFAHTAVERAREFGVKNVALSGGVAYNELITKMIRK----VVEANGLNFHVTTEVPRGDNGVNVGQ 753 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCCCEESSTTCCHHHHHHHHH----HGGGSSCCCCCCTTSCSSGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEEchHHHHHHHHHHHHH----HHHHCCCEEEccCCCCCCcchHHHHH
Confidence 89999999999999999999999999999999999999999977664332 22344667766543 2222 48887
Q ss_pred Hhcc
Q 042742 355 FMSY 358 (834)
Q Consensus 355 ~L~~ 358 (834)
++.+
T Consensus 754 A~iA 757 (772)
T 4g9i_A 754 AFLG 757 (772)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 34
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=96.56 E-value=0.091 Score=57.96 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 280 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 280 Dia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
..|..++...+..+|......+...+. .||++|.+....++-+..+...+
T Consensus 234 ~~a~~~l~~~~~~Lg~~i~nl~~~ldP-~IviGGgi~~~~~~~~~~l~~~l 283 (366)
T 3mcp_A 234 EAAIAAFEELGEMAGDALASAITLIDG-LIVIGGGLSGASKYILPVLLKEM 283 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS-EEEEESGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-EEEEEChhhhchHHHHHHHHHHH
Confidence 357778888888888888877888999 99999999886665555554444
No 35
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.54 E-value=0.066 Score=56.56 Aligned_cols=69 Identities=10% Similarity=-0.147 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhc
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRF-GLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~-~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
..+|+.++.-.+..++... ..... +-..|+++|+...+ +. ..+...++-+ ..++...+ ..+.+||+..
T Consensus 209 D~~A~~i~~~~~~~La~~i--~~~~~~~p~~vvlgGGv~~~--~~-~~l~~~l~~~---~~~i~~~~---~a~~~GA~~l 277 (291)
T 1zbs_A 209 IPAVYSLVQNSFDDFLVRN--VLRYNRPDLPLHFIGSVAFH--YR-EVLSSVIKKR---GLTLGSVL---QSPMEGLIQY 277 (291)
T ss_dssp SHHHHHHHHHHHHHHHHHH--TGGGCCTTSCEEEESHHHHH--TH-HHHHHHHHHT---TCCEEEEE---SCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH--hcccCCCCceEEEECchHHh--hH-HHHHHHHHHc---CCeecccC---cCHHHHHHHH
Confidence 4789999999999999887 22333 66789999998766 11 2233333222 23444444 5666666654
Q ss_pred c
Q 042742 358 Y 358 (834)
Q Consensus 358 ~ 358 (834)
+
T Consensus 278 a 278 (291)
T 1zbs_A 278 H 278 (291)
T ss_dssp H
T ss_pred H
Confidence 4
No 36
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=96.31 E-value=0.066 Score=62.41 Aligned_cols=231 Identities=12% Similarity=0.078 Sum_probs=134.2
Q ss_pred eecCCHHHHHHHHHhcccccCcEEEeCC-----ccc---------cc------hhHHHHHhCCCcccchhhHHHHHHHHH
Q 042742 99 FETTKISECLDFIHSKQLHRGGIHATGG-----GAY---------KF------ADLFKERLGVSLDKEDEMDCLVAGANF 158 (834)
Q Consensus 99 f~t~~i~~~l~fi~~~~~~~~~i~~TGG-----GA~---------k~------~~~~~~~lgi~~~k~dEm~cli~G~~f 158 (834)
||..-|+.||+-..-..-....|.+|.+ |++ ++ ++.|....+.++.-++-..||+.-+.|
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v~HHlaHAaSAf~ 130 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWDLPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFVQHHLAHAASAYY 130 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSCHHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEECCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECCCccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEecCHHHHHHHHhhh
Confidence 8888888887755222112233676766 110 00 011111124456667778888777655
Q ss_pred HHhcccccceEeecCceeeeecCCCCCccEEE-EEcCCc---eEEEEEcCCCceEEeccc--ccCchhHHHHHHhhcCCC
Q 042742 159 LLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLL-VNIGSG---VSMIKVDGDGKFERVSGT--NVGGGTYWGLGRLLTKCK 232 (834)
Q Consensus 159 Ll~~~~~e~f~~~~~~~~~~~~~~~~~~PyLl-VNIGSG---vSiikV~~~~~f~RvgGt--siGGGTf~GL~~LLtg~~ 232 (834)
.. +..|.++ |-=|.| ++.+.+-.+++++.++-+ .=.-|-|++-...++|-.
T Consensus 131 ~S-----------------------pfe~aaVLvvDG~Ge~~T~~v~~~~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~ 187 (576)
T 3ven_A 131 FS-----------------------GEDRGAVLIVDGQGEEECVTLAHAEGGKITVLDTVPGAWSLGFFYEHVSEYTGLG 187 (576)
T ss_dssp TS-----------------------SCSEEEEEEECSCSSSEEEEEEEEETTEEEEEEEEEGGGCHHHHHHHHHHHTTSC
T ss_pred cC-----------------------CCCceEEEEEeCCCCCceEEEEEeeCCEEEEEEEeccCChHHHHHHHHHHHcCCC
Confidence 42 1123433 333442 345666556899999886 235567888777777765
Q ss_pred CHH--HHHHHhcCCCCC-CC-CCC----C---CC---------------------------------ccccccccccccc
Q 042742 233 SFD--ELLELSQRGDNR-DH-RHI----G---LS---------------------------------ASTIASSFGKTIS 268 (834)
Q Consensus 233 ~fd--eil~LA~~Gd~~-dy-~~~----G---L~---------------------------------~d~iASsFGK~~~ 268 (834)
..+ +++.||.-|++. .| +.+ | +. .+....-|+....
T Consensus 188 ~~gE~KVMGLApYG~p~~~~~~~l~~~dg~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~R~ 267 (576)
T 3ven_A 188 GDNPGKLMGLAAHGTTVDETLSAFAFDSDGYRLNLIDPQARDPEDWDEYSVTERAWFAHLERIYRLPPNEFVRRYDPAKG 267 (576)
T ss_dssp TTCHHHHHHHHTTSCCSCTTTTTEEEETTEEEETTSCTTCCCTTSSSSHHHHHHHHHHHHHHHSSSCCCCEEEEEETTTT
T ss_pred CCCccceeEEcCCCCCchhhhHhhccCCCceeeeccccccccccccccccccccccccchhcccccchHHHHHHhccccc
Confidence 444 599999999873 23 111 0 00 0111111221111
Q ss_pred cc-ccccCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCc-eEeecc
Q 042742 269 DK-KELADYR--PEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEA-QAMFLR 344 (834)
Q Consensus 269 ~~-~~~~~~~--~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~-~a~Fl~ 344 (834)
.. ...+..+ .+|||+|.-..+...+..++...++.+|+++|+++|+...|..+....... .+. ++++..
T Consensus 268 ~~~~~~~~~~~~~~dIAasfQ~~l~~~L~~~~~~a~~~tg~~~l~LaGGVa~N~~L~~~l~~~-------~~~~~v~vpp 340 (576)
T 3ven_A 268 RVVRDTRRDPYEYRDLAATAQAALERAVFGLADSVLARTGERTLFVAGGVGLNATMNGKLLTR-------STVDKMFVPP 340 (576)
T ss_dssp EEEEEESSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHTS-------TTCSEEECCT
T ss_pred ccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEecchHHHHHHHHHHHHHh-------cCCCeEEeCC
Confidence 10 0012233 799999999999999999999999999999999999999999877654321 223 343332
Q ss_pred CCchhh-HHHHHhccc
Q 042742 345 HEGFLG-ALGAFMSYE 359 (834)
Q Consensus 345 h~gy~G-AlGA~L~~~ 359 (834)
-.+=.| |||+++.+.
T Consensus 341 ~~~D~G~aiGqA~~a~ 356 (576)
T 3ven_A 341 VASDIGVSLGAAAAVA 356 (576)
T ss_dssp TCSGGGHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHH
Confidence 222233 688887653
No 37
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=96.20 E-value=0.31 Score=51.61 Aligned_cols=67 Identities=13% Similarity=-0.003 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccC-cchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhc
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRG-HAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~-~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
...|+.++.-.+..++......+.. +-..|+++|+.... .+.-...+... +..+...+++||++.
T Consensus 225 D~~A~~i~~~~~~~L~~~l~~l~~~-~p~~VvlgGgv~~~~~~~l~~~l~~~-------------i~~~~~~~~~GAa~l 290 (305)
T 1zc6_A 225 DPEADALLRQAGEDAWAIARALDPQ-DELPVALCGGLGQALRDWLPPGFRQR-------------LVAPQGDSAQGALLL 290 (305)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTT-CCSCEEEESHHHHHTGGGSCHHHHHH-------------CCCCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEECCchHhHHHHHHHHHHhh-------------ccCCCCCHHHHHHHH
Confidence 4678888888888888765544444 56779999988652 22222222221 123568899999887
Q ss_pred cc
Q 042742 358 YE 359 (834)
Q Consensus 358 ~~ 359 (834)
+.
T Consensus 291 a~ 292 (305)
T 1zc6_A 291 LQ 292 (305)
T ss_dssp TC
T ss_pred Hh
Confidence 64
No 38
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.08 E-value=0.033 Score=58.93 Aligned_cols=72 Identities=11% Similarity=-0.135 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhc
Q 042742 279 EDISLSLLRMISYNIGQISYLNALRF-GLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 279 eDia~SLl~mI~~nIgqlA~l~A~~~-~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
..+|+.++.-.+..++... ..... +...|+++|+...+ +. ..+...++ +...++.. ....|++||++.
T Consensus 207 D~~A~~i~~~~~~~La~~i--~~~~~~~p~~vvlgGGv~~~--l~-~~l~~~l~---~~~~~i~~---~~~a~~~GAa~l 275 (291)
T 1zxo_A 207 EPAIRQLVMNSFIAFFRRN--VMQYDYKQYPVHFIGSIAYC--YK-EILQDAAR---QTGIQIGK---ILQSPMEGLIQY 275 (291)
T ss_dssp STTTTHHHHHHHHHHHTTT--GGGSCTTTSCEEECSHHHHH--TH-HHHHHHTT---TTTCCEEE---ECSCTHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHH--hcccCCCCceEEEECcHHHH--HH-HHHHHHHh---cCCcEEee---cCCCHHHHHHHH
Confidence 3467778888888887776 22222 56789999998766 32 23333331 22234433 347899999887
Q ss_pred cccc
Q 042742 358 YEKH 361 (834)
Q Consensus 358 ~~~~ 361 (834)
+.++
T Consensus 276 a~~~ 279 (291)
T 1zxo_A 276 HSQL 279 (291)
T ss_dssp SSSC
T ss_pred HHHH
Confidence 6544
No 39
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.81 E-value=0.1 Score=59.51 Aligned_cols=156 Identities=15% Similarity=0.141 Sum_probs=94.9
Q ss_pred EEEEEcCCceEEEEEcC--C----------------C----ceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcC--
Q 042742 188 YLLVNIGSGVSMIKVDG--D----------------G----KFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQR-- 243 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~--~----------------~----~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~-- 243 (834)
.+.+++||+..+..+.+ + + .|.-.|++..||+++-=+.. +....+++++.++|++
T Consensus 263 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~ 341 (503)
T 2w40_A 263 EAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKLIDDPSEASDIMEKCE 341 (503)
T ss_dssp CEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTSSSCGGGHHHHHHHCC
T ss_pred cEEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhhhHhHHHHHHH-hCCcCCHHHHHHHHhhCC
Confidence 47788998876655542 1 0 23333344444444433333 3223568888777743
Q ss_pred CCCC----CC-CCCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC--C-CEEEEe
Q 042742 244 GDNR----DH-RHIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG--L-KRIFFG 312 (834)
Q Consensus 244 Gd~~----dy-~~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~--i-~~I~f~ 312 (834)
+.++ .| .... -.++..++-+|-- ...+++|++++++..|++++-++.-...+..| + ++|+++
T Consensus 342 ~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~ 414 (503)
T 2w40_A 342 NTTGVIFVPAFSGLYAPRWRSDARASIYGMT-------FNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCD 414 (503)
T ss_dssp SCTTCEEECCTTCBCTTTCBTTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEE
T ss_pred CCCCEEEecCCCCCCCCCCCCCCcEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEe
Confidence 3221 11 1111 2245555555531 25689999999999999999987665544334 5 789999
Q ss_pred cccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 313 GFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 313 G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
|+..+|.. -++.++-.. ++.+..+...+ .+|+||++.+.
T Consensus 415 GG~a~s~~-~~Q~~Adv~------g~pV~~~~~~e-~~alGaA~la~ 453 (503)
T 2w40_A 415 GGMTKNKP-FMQFNSDII------NTKIEVSKYKE-VTSLGAAVLAG 453 (503)
T ss_dssp SGGGGCHH-HHHHHHHHH------TSCEEEESCSC-HHHHHHHHHHH
T ss_pred CccccCHH-HHHHHHHHH------CCeEEecCCCc-chHHHHHHHHH
Confidence 99987775 455666555 56666555555 89999998763
No 40
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=95.73 E-value=0.95 Score=46.93 Aligned_cols=153 Identities=15% Similarity=0.169 Sum_probs=86.3
Q ss_pred cchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCc-cEEEEEcCCceEE-EEEcCCCc
Q 042742 130 KFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLF-PYLLVNIGSGVSM-IKVDGDGK 207 (834)
Q Consensus 130 k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~-PyLlVNIGSGvSi-ikV~~~~~ 207 (834)
.+.+.+++.+++++.-.+...|...|-.++-. ..... .+++|.+|+|+-. +-+++ +
T Consensus 105 ~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~--------------------~~~~~~~~~~l~~GtGIG~giv~~G--~ 162 (267)
T 1woq_A 105 DIDALLTARLGRPVEVINDADAAGLAEARYGA--------------------GAGVKGTVLVITLGTGIGSAFIFDG--K 162 (267)
T ss_dssp BHHHHHHHHHTSCEEEEEHHHHHHHHHHHHST--------------------TTTCCSEEEEEEESSSEEEEEEETT--E
T ss_pred CHHHHHHHHHCCCEEEeehhHHHHHHHHHhCC--------------------CCCCCCcEEEEEECcceEEEEEECC--E
Confidence 34467888999999999999999999765521 01112 3678889999885 33343 3
Q ss_pred eEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCcccccccccccccccccccCCChhHHHHHHHH
Q 042742 208 FERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGKTISDKKELADYRPEDISLSLLR 287 (834)
Q Consensus 208 f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~ 287 (834)
..| | | +++++......++.. ||.-+-.. ....-++.
T Consensus 163 l~~--G-----g---EiGh~~v~~~~lE~~----------------------~S~~~l~~------~~~~~~~~------ 198 (267)
T 1woq_A 163 LVP--N-----A---ELGHLEIDGHDAETK----------------------ASAVARER------DGLSWDEY------ 198 (267)
T ss_dssp EET--T-----C---CGGGCEETTEEHHHH----------------------HSHHHHHH------TTCCHHHH------
T ss_pred Ecc--C-----c---eeeeEEecCccHHHH----------------------hCHHHHhh------cchhHHHH------
Confidence 332 2 1 333332221112221 11111000 01111222
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 288 MISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 288 mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
+..++......+...+.+.|+++|.+....+.-+..+. ...++.+.+.+...+++||+...
T Consensus 199 --~~~l~~~l~~l~~~ldP~~IvlgG~i~~~~~~~~~~~~--------~~~~i~~s~l~~~a~~~GAa~l~ 259 (267)
T 1woq_A 199 --SVLLQRYFSHVEFLFSPELFIVGGGISKRADEYLPNLR--------LRTPIVPAVLRNEAGIVGAAIEI 259 (267)
T ss_dssp --HHHHHHHHHHHHHHHCCSEEEEESGGGGGGGGTGGGCC--------CSSCEEECSCSTTHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHcCCCEEEEeChhhcccHHHHHhhc--------cCceEEECCcCCcHHHHHHHHHH
Confidence 23333333334556788999999998876543333221 25677778888999999998754
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.67 E-value=0.11 Score=59.09 Aligned_cols=128 Identities=14% Similarity=0.089 Sum_probs=82.5
Q ss_pred chhHHHHHHhhcCCCCHHHHHHHhcC---CCCCCC--CC-CC-----CCcccccccccccccccccccCCChhHHHHHHH
Q 042742 218 GGTYWGLGRLLTKCKSFDELLELSQR---GDNRDH--RH-IG-----LSASTIASSFGKTISDKKELADYRPEDISLSLL 286 (834)
Q Consensus 218 GGTf~GL~~LLtg~~~fdeil~LA~~---Gd~~dy--~~-~G-----L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl 286 (834)
||..+.-.+-..+..+++++.+++.+ |.++-+ +- .| -.++..++-+|-- .+.+++|++++++
T Consensus 294 ~G~~~~W~~~~~~~~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~-------~~~~~~~~~rAvl 366 (484)
T 2itm_A 294 AASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLT-------HQHGPNELARAVL 366 (484)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEEE-------TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCC-------CCCCHHHHHHHHH
Confidence 44444434434466679998888754 222110 00 01 1235555555521 2568999999999
Q ss_pred HHHHHHHHHHHHHHHH-HcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 287 RMISYNIGQISYLNAL-RFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 287 ~mI~~nIgqlA~l~A~-~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..|++++-++.-...+ -..+++|+.+|+..+|..+ |+.++-.. ++.+..+++++..+|+||++.+.
T Consensus 367 Egia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~-~Qi~Adv~------g~pV~~~~~~e~~~alGAA~lA~ 433 (484)
T 2itm_A 367 EGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYW-RQMLADIS------GQQLDYRTGGDVGPALGAARLAQ 433 (484)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHH-HHHHHHHH------CCCEEEESCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHH-HHHHHHHh------CCeEEeCCCCCcccHHHHHHHHH
Confidence 9999999776543322 1245789999999987764 55676655 67777888888889999998753
No 42
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.58 E-value=0.14 Score=58.53 Aligned_cols=156 Identities=12% Similarity=0.046 Sum_probs=93.9
Q ss_pred EEEEEcCCceEEEEEcCC------------------C---ceEEecccccCchhHHHHHHhhcC-CCCHHHHHHHhcC--
Q 042742 188 YLLVNIGSGVSMIKVDGD------------------G---KFERVSGTNVGGGTYWGLGRLLTK-CKSFDELLELSQR-- 243 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~~------------------~---~f~RvgGtsiGGGTf~GL~~LLtg-~~~fdeil~LA~~-- 243 (834)
.+.+++||+..+..+.++ + .|...|++..||..+ --.+-..+ ..+++++.++|++
T Consensus 260 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~-~W~~~~~~~~~~~~~l~~~a~~~~ 338 (504)
T 2d4w_A 260 QAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSIAVTGSLV-QWLRDNLGMFEDAPDVEWLAGKVQ 338 (504)
T ss_dssp EEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCTTSCCEEEEEEEESCSHHHH-HHHHHTTCTTTTCSCTHHHHTTSS
T ss_pred cEEEEcchhheeeeecCCccccCCCCcEEEEEEEcCCCCceEEEcchhhhHHHHH-HHHHHHhCCCCCHHHHHHHHhhCC
Confidence 577889988776555421 1 233333444444443 33333233 3456777777754
Q ss_pred CCCC----CC-CCCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEec
Q 042742 244 GDNR----DH-RHIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRF--GLKRIFFGG 313 (834)
Q Consensus 244 Gd~~----dy-~~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~--~i~~I~f~G 313 (834)
+.++ .| .... -.++..++-+|-- ...+++|++++++..|++.+-++.-...+.. .+++|+++|
T Consensus 339 ~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~G 411 (504)
T 2d4w_A 339 DNGGAYFVPAFSGLFAPYWRPDARGALVGLT-------RYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDG 411 (504)
T ss_dssp SCTTCEEECTTCCCSTTTCCCCSCEEEEEEC-------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEES
T ss_pred CCCCEEEecCCCCCCCCCCCCCCCEEEEeCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeC
Confidence 2221 11 1111 2245555555521 2468999999999999999988765554433 467899999
Q ss_pred ccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 314 FFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 314 ~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
+..+|.. -|+.++-.. ++.+..++..+ .+|+||++.+.
T Consensus 412 G~a~s~~-~~Qi~Adv~------g~pV~~~~~~e-~~alGaA~lA~ 449 (504)
T 2d4w_A 412 GMVANEL-LMQFQADQL------GVDVVRPKVAE-TTALGAAYAAG 449 (504)
T ss_dssp GGGGCHH-HHHHHHHHH------TSCEEEESCSC-HHHHHHHHHHH
T ss_pred CcccCHH-HHHHHHHHh------CCeEEeCCCCc-chHHHHHHHHH
Confidence 9988775 455666555 56665555544 89999998753
No 43
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.38 E-value=0.16 Score=57.84 Aligned_cols=155 Identities=13% Similarity=0.137 Sum_probs=93.1
Q ss_pred EEEEEcCCceEEEEEcCC----C----------------ceEEecccccCchhHHHHHHhhcC-CCCHHHHHHHhcC--C
Q 042742 188 YLLVNIGSGVSMIKVDGD----G----------------KFERVSGTNVGGGTYWGLGRLLTK-CKSFDELLELSQR--G 244 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~~----~----------------~f~RvgGtsiGGGTf~GL~~LLtg-~~~fdeil~LA~~--G 244 (834)
-+.+++||+..+..+.++ + .|.--|++..||+++ --.+- ++ ..+++++.++|++ +
T Consensus 257 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~-~w~~~-~~~~~~~~~l~~~a~~~~~ 334 (495)
T 2dpn_A 257 EGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAV-GWLKE-VGLIRESAEVEALAASVED 334 (495)
T ss_dssp CEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHH-HHHHH-TTSSSSTTTHHHHHHTCSC
T ss_pred cEEEEccHhhhhhhhcCCccccCCCCceEEEEEEcCCCCEEEEechHHhHHHHH-HHHHH-cCCccCHHHHHHHHhhCCC
Confidence 467788888665555421 1 123334444445444 33333 33 2457777777743 2
Q ss_pred CCC----CC-CCCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecc
Q 042742 245 DNR----DH-RHIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG--LKRIFFGGF 314 (834)
Q Consensus 245 d~~----dy-~~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~--i~~I~f~G~ 314 (834)
.++ .| .... -.++..++-+|-- ...+++|++++++..|++++-++.-...+..| +++|+++|+
T Consensus 335 ~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG 407 (495)
T 2dpn_A 335 TGDVYFVPAFTGLGAPYWDPYARGTLLGLT-------RGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGG 407 (495)
T ss_dssp CSSCEEECCTTCBCTTTCBTTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESG
T ss_pred CCcEEEecCCCCCCCCCCCCCCceEEEecC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 221 11 1111 2244555555521 25689999999999999999888665444334 578999999
Q ss_pred cccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 315 FIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 315 fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..+|..+ ++.++-.. ++.+..+...+ .+|+||++.+.
T Consensus 408 ~a~n~~~-~q~~Adv~------g~pV~~~~~~e-~~alGaA~la~ 444 (495)
T 2dpn_A 408 MAQNRLF-LKIQADLL------GVPVAVPEVTE-TTALGAALMAG 444 (495)
T ss_dssp GGGCHHH-HHHHHHHH------TSCEEEESCSC-HHHHHHHHHHH
T ss_pred cccCHHH-HHHHHHHh------CCeeEecCCcc-cHHHHHHHHHH
Confidence 9887754 45666555 56666565555 89999998753
No 44
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.35 E-value=0.27 Score=56.05 Aligned_cols=131 Identities=17% Similarity=0.092 Sum_probs=81.7
Q ss_pred cccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCC------CCC-CCC---CCcccccccccccccccccccCCChhHHHH
Q 042742 214 TNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNR------DHR-HIG---LSASTIASSFGKTISDKKELADYRPEDISL 283 (834)
Q Consensus 214 tsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~------dy~-~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~ 283 (834)
...||..+-=+...+....+++++.++|++-... .|- ..+ ..++.-++-+|-. ...+++|+++
T Consensus 308 ~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~l~R 380 (501)
T 3g25_A 308 IFVSGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLT-------RGTEKEHFIR 380 (501)
T ss_dssp ESCSTHHHHHHHHTSCCCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEEC-------TTCCHHHHHH
T ss_pred cccHHHHHHHHHHHcCCCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEccC-------CCCCHHHHHH
Confidence 3445444322333333336788888888543221 110 001 1234444555521 2568999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC--CCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 284 SLLRMISYNIGQISYLNALRFG--LKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 284 SLl~mI~~nIgqlA~l~A~~~~--i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
+++..|++.+-++--...+..| +++|+.+|+..+|..+ |+.++-.. ++.+..++.. -.+|+||++.+.
T Consensus 381 AvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~-~Qi~Adv~------g~pV~~~~~~-e~~alGaA~la~ 450 (501)
T 3g25_A 381 ATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFI-MQFQADIV------NTSVERPEIQ-ETTALGAAFLAG 450 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHH-HHHHHHHH------TSEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHH-HHHHHHHh------CCceEecCCC-cchHHHHHHHHH
Confidence 9999999999887655555444 6889999998877754 55676655 5666565544 489999998763
No 45
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.31 E-value=0.15 Score=59.17 Aligned_cols=156 Identities=17% Similarity=0.160 Sum_probs=95.8
Q ss_pred EEEEEcCCceEEEEEcC-C----------------CceEEecccccCchhHHHHHHhh-----------cCCCCHHHHHH
Q 042742 188 YLLVNIGSGVSMIKVDG-D----------------GKFERVSGTNVGGGTYWGLGRLL-----------TKCKSFDELLE 239 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~-~----------------~~f~RvgGtsiGGGTf~GL~~LL-----------tg~~~fdeil~ 239 (834)
-+.+++||+..+..+.. + +.|...|+.+.+|+.+-=+...+ .|...|+++.+
T Consensus 289 ~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~ 368 (572)
T 3jvp_A 289 KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEE 368 (572)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHH
T ss_pred cEEEEecchhheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHH
Confidence 56778999866544432 1 12223344445555442233333 24455889999
Q ss_pred HhcCCCC-------CCCC-C---CCCCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCC--
Q 042742 240 LSQRGDN-------RDHR-H---IGLSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGL-- 306 (834)
Q Consensus 240 LA~~Gd~-------~dy~-~---~GL~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i-- 306 (834)
+|++-.. ..|- . .-.++++-++-+|-- ...+++|++++++..|++.+-++.-... ..|.
T Consensus 369 ~a~~~~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~-------~~~t~~~l~RAvlEgia~~~r~~~~~l~-~~g~~~ 440 (572)
T 3jvp_A 369 KASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYT-------LQTKPEEIYRALLEATAFGTRAIVDAFH-GRGVEV 440 (572)
T ss_dssp HHTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHH-TTTCCE
T ss_pred HHHhCCCCCCCeEeCCccCCCCCCCCCCCcCEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCc
Confidence 9865432 1121 0 113456666666632 1468999999999999999988744332 2444
Q ss_pred CEEEEecccc-cCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 307 KRIFFGGFFI-RGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 307 ~~I~f~G~fi-~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
++|+.+|+.. +|. +-|+.++-.+ ++.+..++. .-.+|+||++.+.
T Consensus 441 ~~i~~~GGga~ks~-~~~Qi~ADv~------g~pV~~~~~-~e~~alGaA~lA~ 486 (572)
T 3jvp_A 441 HELYACGGLPQKNH-LLMQIFADVT------NREIKVAAS-KQTPALGAAMFAS 486 (572)
T ss_dssp EEEEEESSHHHHCH-HHHHHHHHHH------TSCEEEBCC-SSHHHHHHHHHHH
T ss_pred CEEEEEcCchhhCH-HHHHHHHHHH------CCeeEecCC-CccHHHHHHHHHH
Confidence 6799999998 555 4566677665 566655554 4589999998653
No 46
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.08 E-value=0.21 Score=56.98 Aligned_cols=156 Identities=15% Similarity=0.059 Sum_probs=93.2
Q ss_pred EEEEEcCCceEEEEEcC-C-----C-------------ceEEecccccCchhHHHHHHhhcC-CCCHHHHHHHhcCCC--
Q 042742 188 YLLVNIGSGVSMIKVDG-D-----G-------------KFERVSGTNVGGGTYWGLGRLLTK-CKSFDELLELSQRGD-- 245 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~-~-----~-------------~f~RvgGtsiGGGTf~GL~~LLtg-~~~fdeil~LA~~Gd-- 245 (834)
-+.+++||+..+..+.+ + + .|...|++..||..+ --.+-..+ ..+++++.++|++-.
T Consensus 254 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~-~w~~~~~~~~~~~~~l~~~a~~~~~~ 332 (497)
T 2zf5_O 254 MVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRVSYALEGSIFVTGAAV-QWLRDGIKIIKHASETEELATKLESN 332 (497)
T ss_dssp CEEEEESSSEEEEEEEETCCCCCTTSEEEEEEEETTEEEEEEEEEESCSHHHH-HHHHHTSCCCSCGGGHHHHHTTSSSC
T ss_pred cEEEEcchhheeeEECCCCccCCCCcEEEEEEEcCCCCEEEEechhhhHHHHH-HHHHHHhCCCCcHHHHHHHHhhCCCC
Confidence 37788888876654432 1 0 233334445555543 33332233 356888888875422
Q ss_pred CC----CCC-CCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccccc
Q 042742 246 NR----DHR-HIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIR 317 (834)
Q Consensus 246 ~~----dy~-~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~ 317 (834)
++ .|- ... -.++..++-+|-- ...+++|++++++..|++.+-++.-...+.-.+++|+.+|+..+
T Consensus 333 ~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~l~rAvlEgia~~~~~~l~~l~~~~~~~~i~~~GG~a~ 405 (497)
T 2zf5_O 333 EGVYFVPAFVGLGAPYWDQFARGIIIGIT-------RGTGREHLARATLEAIAYLTRDVVDEMEKLVQIKELRVDGGATA 405 (497)
T ss_dssp TTCEEECCTTCBCTTTCBTTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCEEEESGGGG
T ss_pred CceEEecCcCCCCCCCCCCCCCEEEEeCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEeCcccc
Confidence 10 110 111 1244445555421 25689999999999999998776443211115788999999998
Q ss_pred CcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 318 GHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 318 ~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
|..+ ++.++-.. ++.+..+++.+ .+|+||++.+.
T Consensus 406 s~~~-~Qi~Adv~------g~pV~~~~~~e-~~alGaA~lA~ 439 (497)
T 2zf5_O 406 NDFL-MQFQADIL------NRKVIRPVVKE-TTALGAAYLAG 439 (497)
T ss_dssp CHHH-HHHHHHHH------TSCEEEESCSC-HHHHHHHHHHH
T ss_pred CHHH-HHHHHhhc------CCeEEEcCCCc-chHHHHHHHHH
Confidence 7754 45666555 56676666666 89999998763
No 47
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.07 E-value=0.26 Score=56.50 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=94.3
Q ss_pred EEEEEcCCceEEEEEcCC--------------------CceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcC--CC
Q 042742 188 YLLVNIGSGVSMIKVDGD--------------------GKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQR--GD 245 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~~--------------------~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~--Gd 245 (834)
-+.+++||+..++.+.++ +.|..-|+...||..+-=+...+....+++++.++|++ |.
T Consensus 259 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~ 338 (510)
T 2p3r_A 259 MAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNT 338 (510)
T ss_dssp CEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSC
T ss_pred cEEEeecchheeEEecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccCCCcHHHHHHHHhhCCCC
Confidence 467788988654444211 12222334445554443333333333467777777754 32
Q ss_pred CC----CC-CCCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccc
Q 042742 246 NR----DH-RHIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALR--FGLKRIFFGGFF 315 (834)
Q Consensus 246 ~~----dy-~~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~--~~i~~I~f~G~f 315 (834)
++ .| .... -.++.-++-+|-- ...+++|++++++..|++.+-++.-...+. ..+++|+.+|+.
T Consensus 339 ~gl~~~P~~~G~r~P~~d~~arg~~~Gl~-------~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGg 411 (510)
T 2p3r_A 339 NGVYVVPAFTGLGAPYWDPYARGAIFGLT-------RGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGA 411 (510)
T ss_dssp TTCEEECCTTCCBTTTCCTTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGG
T ss_pred CceEEeCcccCCCCCCCCCCCCEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCch
Confidence 21 11 1111 1344455555532 246899999999999999998876555444 356899999998
Q ss_pred ccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 316 IRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 316 i~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
.+|..+ |+.++-.. ++.+..+...+ .+|+||++.+.
T Consensus 412 a~s~~~-~Qi~ADv~------g~pV~~~~~~e-~~alGaA~lA~ 447 (510)
T 2p3r_A 412 VANNFL-MQFQSDIL------GTRVERPEVRE-VTALGAAYLAG 447 (510)
T ss_dssp GGCHHH-HHHHHHHH------TSEEEEESCCC-HHHHHHHHHHH
T ss_pred hcCHHH-HHHHHHHh------CCceEecCCCC-cHHHHHHHHHH
Confidence 877754 55666655 56666666554 89999998653
No 48
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.97 E-value=0.31 Score=56.03 Aligned_cols=132 Identities=16% Similarity=0.073 Sum_probs=77.1
Q ss_pred ccccCchhHHHHHHhhcCCCCHHHHHHHhcC--CCCC----CCC-CCC---CCcccccccccccccccccccCCChhHHH
Q 042742 213 GTNVGGGTYWGLGRLLTKCKSFDELLELSQR--GDNR----DHR-HIG---LSASTIASSFGKTISDKKELADYRPEDIS 282 (834)
Q Consensus 213 GtsiGGGTf~GL~~LLtg~~~fdeil~LA~~--Gd~~----dy~-~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia 282 (834)
+...||..+-=+...+....+++++.++|++ |+++ .|- ... ..++.-++-+|-. ...+++|++
T Consensus 326 ~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~-------~~~~~~~l~ 398 (520)
T 4e1j_A 326 SIFVAGAAVQWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMT-------RNTGPAEFA 398 (520)
T ss_dssp EESCSHHHHHHHHHTTCCC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEEC-------TTCCHHHHH
T ss_pred hHhhHHHHHHHHHHHcCCcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEeccc-------CCCCHHHHH
Confidence 3445554443344444333568888888754 4331 111 000 2244555555532 246899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 283 LSLLRMISYNIGQISYLNALR----FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 283 ~SLl~mI~~nIgqlA~l~A~~----~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
++++..|++.+-++.-...+. -.+++|+.+|+..+|.. -|+.++-.. ++.+..++..+ .+|+||++.+
T Consensus 399 RAvlEgia~~~r~~l~~l~~~~~~~g~~~~i~~~GGgaks~~-~~Qi~ADvl------g~pV~~~~~~e-~~alGAA~lA 470 (520)
T 4e1j_A 399 RAALEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGMVASDW-TMQRLSDLL------DAPVDRPVILE-TTALGVAWLA 470 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-----CCEEEESGGGGCHH-HHHHHHHHH------TSCEEEESCCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCcceEEEeCccccCHH-HHHHHHHHh------CCeEEecCCCc-cHHHHHHHHH
Confidence 999999999998875444332 25788999999887665 455676655 56666555544 8999999876
Q ss_pred c
Q 042742 359 E 359 (834)
Q Consensus 359 ~ 359 (834)
.
T Consensus 471 ~ 471 (520)
T 4e1j_A 471 G 471 (520)
T ss_dssp H
T ss_pred H
Confidence 3
No 49
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.96 E-value=0.44 Score=54.44 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=82.8
Q ss_pred cccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCC---C-CC-CC-----CCcccccccccccccccccccCCChhHHHH
Q 042742 214 TNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRD---H-RH-IG-----LSASTIASSFGKTISDKKELADYRPEDISL 283 (834)
Q Consensus 214 tsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~d---y-~~-~G-----L~~d~iASsFGK~~~~~~~~~~~~~eDia~ 283 (834)
...||..+-=+...+....+++++.++|++-...+ + +- .| ..++.-++-+|-- ...+++|+++
T Consensus 307 ~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~-------~~~~~~~l~R 379 (506)
T 3h3n_X 307 IFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLT-------RGTTKEDFVR 379 (506)
T ss_dssp ECCSSHHHHHHHHTSCCCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECCC-------TTCCHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEccC-------CCCCHHHHHH
Confidence 34455444333333433457888888886532211 0 10 02 1234445555521 2468999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHc--CCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 284 SLLRMISYNIGQISYLNALRF--GLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 284 SLl~mI~~nIgqlA~l~A~~~--~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
+++..|++.+-++.-...+.. .+++|+.+|+..+|..+ |+.++-.. ++.+..+...+ .+|+||++.+.
T Consensus 380 AvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~-~Qi~ADv~------g~pV~~~~~~e-~~alGaA~lA~ 449 (506)
T 3h3n_X 380 ATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLL-MQFQADIL------DIDVQRAANLE-TTALGAAYLAG 449 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHH-HHHHHHHH------TSEEEECSSSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHH-HHHHHHHh------CCeEEecCCCc-chhHHHHHHHH
Confidence 999999999988765554433 46899999998877754 55676665 66666665544 89999998753
No 50
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.94 E-value=0.23 Score=56.88 Aligned_cols=157 Identities=14% Similarity=0.085 Sum_probs=97.5
Q ss_pred EEEEEcCCceEEEEEcCC---------------CceEEecccccCchhHHHHHHhh--cCCC-CHHHHHHHhcC---CCC
Q 042742 188 YLLVNIGSGVSMIKVDGD---------------GKFERVSGTNVGGGTYWGLGRLL--TKCK-SFDELLELSQR---GDN 246 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~~---------------~~f~RvgGtsiGGGTf~GL~~LL--tg~~-~fdeil~LA~~---Gd~ 246 (834)
-+.+++||+..+..+.+. +.|--.|++..||..+-=+...+ .|.. +++++.++|++ |.+
T Consensus 260 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~ 339 (508)
T 3ifr_A 260 DVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGAD 339 (508)
T ss_dssp EEEEEESSSEEEEECBSCCCCBTTBBCCBCSSTTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGG
T ss_pred cEEEEechhhhheeeCCCcccCCCcceeeeecCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCC
Confidence 578889988776554321 22332334444554443233333 2432 69999998865 222
Q ss_pred ----CCCC-CCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEeccccc
Q 042742 247 ----RDHR-HIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALR-FGLKRIFFGGFFIR 317 (834)
Q Consensus 247 ----~dy~-~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~-~~i~~I~f~G~fi~ 317 (834)
..|- ... -.++..++-+|-- ...+++|++++++..|++.+-++.-...+. ..+++|+.+|+..+
T Consensus 340 gl~flP~~~Ger~P~~d~~arg~~~Gl~-------~~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~ 412 (508)
T 3ifr_A 340 GLVCLPYFLGEKTPIHDPFASGTFTGLS-------LSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTR 412 (508)
T ss_dssp GCEEECCTTCCC----CCCCCCEEESCC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGG
T ss_pred CeEEecCCCCCCCCCCCCCcCEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCccc
Confidence 1121 111 2345666666632 145899999999999999988875433332 34578999999988
Q ss_pred CcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 318 GHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 318 ~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
|.. -|+.++-.. ++.+..++..+ .+|+||++.+.
T Consensus 413 s~~-~~Qi~ADv~------g~pV~~~~~~e-~~alGaA~lA~ 446 (508)
T 3ifr_A 413 SRV-WMGIMADVL------QRPVQLLANPL-GSAVGAAWVAA 446 (508)
T ss_dssp CHH-HHHHHHHHH------TSCEEEEECCS-THHHHHHHHHH
T ss_pred CHH-HHHHHHHHh------CCeEEecCCCC-chHHHHHHHHH
Confidence 765 466676655 66776666555 89999998763
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.77 E-value=0.58 Score=53.75 Aligned_cols=156 Identities=15% Similarity=0.102 Sum_probs=95.5
Q ss_pred EEEEEcCCceEEEEEcC----------------CCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcC---CCC--
Q 042742 188 YLLVNIGSGVSMIKVDG----------------DGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQR---GDN-- 246 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~----------------~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~---Gd~-- 246 (834)
-+.+++||+..+..+.. ++.|...+++..||..+-=+...+ |. +++++.++|++ |.+
T Consensus 288 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gg~~l~w~~~~~-~~-~~~~l~~~a~~~~~g~~gl 365 (515)
T 3i8b_A 288 DVSISLGTSGVAAAISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAAL-GV-DYDELAKLAFASKPGANGI 365 (515)
T ss_dssp EEEEEESSSEEEEECBSSCCCCTTSCSEEEECSSSSEEEEEEESCSTHHHHHHHHHH-TC-CHHHHHHHHHHSCTTGGGC
T ss_pred cEEEEechhhhhhcccCccccCCCCcEEeeecCCCCEEEeeecccHHHHHHHHHHHh-CC-CHHHHHHHHHhCCCCCCCe
Confidence 67788998876654321 122444455555555554444433 54 69999999854 322
Q ss_pred --CCC-CCCCCC--cccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHH-HcCCCEEEEecccccCcc
Q 042742 247 --RDH-RHIGLS--ASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNAL-RFGLKRIFFGGFFIRGHA 320 (834)
Q Consensus 247 --~dy-~~~GL~--~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~-~~~i~~I~f~G~fi~~~~ 320 (834)
..| ....-| ++.-++-+|--. ..++++|++++++..|++.+-++.-...+ -..+++|+++|+..+|..
T Consensus 366 ~~lP~~~Ger~P~~~~arg~~~Gl~~------~~~~~~~l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~ 439 (515)
T 3i8b_A 366 TLVPYFDGERTPNRPNATATFSGMTL------ANTTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEA 439 (515)
T ss_dssp EEECCTTCBTTTTBTTCCCEEESCCT------TTCSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHH
T ss_pred EEecCCCCCcCCCCcCcceEEecCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHH
Confidence 112 111111 344445555211 23489999999999999998886543333 233578999999887665
Q ss_pred hhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 321 YTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 321 ~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
-|+.++-.. ++.+..++..+ .+|+||++.+.
T Consensus 440 -~~Qi~ADvl------g~pV~~~~~~e-~~alGAA~lA~ 470 (515)
T 3i8b_A 440 -IRTLAPSIL------GMDVTRPATDE-YVAIGAARQAA 470 (515)
T ss_dssp -HHHHHHHHH------TSCEEEECCCC-HHHHHHHHHHH
T ss_pred -HHHHHHHHh------CCceEecCCcc-cHHHHHHHHHH
Confidence 455676665 56665555544 88999998763
No 52
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.20 E-value=0.56 Score=53.71 Aligned_cols=156 Identities=12% Similarity=0.023 Sum_probs=93.2
Q ss_pred EEEEEcCCceEEEEEcC-------C------------CceEEecccccCchhHHHHHHhhc--CCCCHHHHHHHhc---C
Q 042742 188 YLLVNIGSGVSMIKVDG-------D------------GKFERVSGTNVGGGTYWGLGRLLT--KCKSFDELLELSQ---R 243 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~-------~------------~~f~RvgGtsiGGGTf~GL~~LLt--g~~~fdeil~LA~---~ 243 (834)
-+.+++||+..+..+.+ + +.+.-+|++..||..+-=+...+. ...+++++.++|+ .
T Consensus 258 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~ 337 (511)
T 3hz6_A 258 DAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQ 337 (511)
T ss_dssp CEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHT
T ss_pred cEEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCC
Confidence 57888998866544432 1 111223333444444433333333 3357899888874 4
Q ss_pred C---CCCC----CC-CCC---CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Q 042742 244 G---DNRD----HR-HIG---LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFG 312 (834)
Q Consensus 244 G---d~~d----y~-~~G---L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~ 312 (834)
| +++- |- ... ..++.-++-+|-- ...+++|++++++..|++++-++.-...+-. +++|+.+
T Consensus 338 g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~-------~~~~~~~l~RAvlEgia~~~~~~~~~l~~g~-~~~i~~~ 409 (511)
T 3hz6_A 338 GVTVPDGLLFVPYLHAERCPVELPAPRGALLGVT-------GATTRAQILLAVLEGAALSLRWCAELLGMEK-VGLLKVV 409 (511)
T ss_dssp TCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHTGGG-CCEEEEE
T ss_pred CCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEe
Confidence 5 3311 10 000 2234444555521 2468999999999999999988754333322 8999999
Q ss_pred cccccCcchhHHHHHHHHhhccCCCceE-eeccCCchhhHHHHHhccc
Q 042742 313 GFFIRGHAYTMDTISFAVQFWSKGEAQA-MFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 313 G~fi~~~~~~m~~ls~ai~fws~g~~~a-~Fl~h~gy~GAlGA~L~~~ 359 (834)
|+..+|.. -|+.++-.. ++.+ ..+. ..-.+|+||++.+.
T Consensus 410 GGga~s~~-~~Qi~ADv~------g~pV~~~~~-~~e~~alGaA~lA~ 449 (511)
T 3hz6_A 410 GGGARSEA-WLRMIADNL------NVSLLVKPD-AHLHPLRGLAALAA 449 (511)
T ss_dssp SGGGGCHH-HHHHHHHHH------TCEEEECCC-GGGHHHHHHHHHHH
T ss_pred CchhcCHH-HHHHHHHHH------CCeeEEecC-CCCchHHHHHHHHH
Confidence 99887765 466677665 5666 4444 56689999998763
No 53
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=94.10 E-value=2.4 Score=47.95 Aligned_cols=78 Identities=10% Similarity=-0.045 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 281 ISLSLLRMISYNIGQISYLNALRFGLK--RIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 281 ia~SLl~mI~~nIgqlA~l~A~~~~i~--~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
+|..++.-.+.-++.-..-.....+.+ .|.++|++.+.++.-...+..+++=+-....++.+. +..-.|.+||++.+
T Consensus 366 va~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~iGAAllA 444 (451)
T 1bdg_A 366 ACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSGKGAAAIA 444 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccHHHHHHHH
Confidence 555555555555544444444555667 577889998888765555655654221114455454 78888999999865
Q ss_pred c
Q 042742 359 E 359 (834)
Q Consensus 359 ~ 359 (834)
.
T Consensus 445 ~ 445 (451)
T 1bdg_A 445 A 445 (451)
T ss_dssp T
T ss_pred H
Confidence 3
No 54
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=93.82 E-value=0.83 Score=52.16 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=94.7
Q ss_pred EEEEEcCCceEEEEEcCC----------------CceEEecccccCchhHHHHHHhhcC-CCCHHHHHHHhcCCC---C-
Q 042742 188 YLLVNIGSGVSMIKVDGD----------------GKFERVSGTNVGGGTYWGLGRLLTK-CKSFDELLELSQRGD---N- 246 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~~----------------~~f~RvgGtsiGGGTf~GL~~LLtg-~~~fdeil~LA~~Gd---~- 246 (834)
-+.+++||+..+..+.+. +.|---|++..||..+-=+...+.. ..++++++++|++-. +
T Consensus 254 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~g 333 (504)
T 3ll3_A 254 HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRN 333 (504)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGG
T ss_pred cEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCC
Confidence 678889988766554321 1122223355566555434444432 245777666665533 2
Q ss_pred ---CCCCCCC-----CCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEeccccc
Q 042742 247 ---RDHRHIG-----LSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALR-FGLKRIFFGGFFIR 317 (834)
Q Consensus 247 ---~dy~~~G-----L~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~-~~i~~I~f~G~fi~ 317 (834)
..|-. | ..++.-++-+|-- ...+++|++++++..|++.+-++.-...+. ..+++|+.+|+..+
T Consensus 334 l~~~P~~~-Ger~P~~d~~arg~~~Gl~-------~~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ 405 (504)
T 3ll3_A 334 LIFLPYLG-GERAPIWDANARGSFVGLT-------RMHQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLK 405 (504)
T ss_dssp CEEECCTT-CBCTTTCBTTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGC
T ss_pred eEEecCcc-CCCCCCCCCccCeEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhc
Confidence 11210 1 2344455555521 256899999999999999998874433221 24688999999888
Q ss_pred CcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 318 GHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 318 ~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
|..+ ++.++-.. ++.+..++..+ .+|+||++.+.
T Consensus 406 s~~~-~Qi~ADv~------g~pV~~~~~~e-~~alGaA~lA~ 439 (504)
T 3ll3_A 406 SDFV-RQLCANIF------NVPIVTMKEQQ-SGTLAAMFLAR 439 (504)
T ss_dssp SHHH-HHHHHHHH------TSCEEEESCSC-HHHHHHHHHHH
T ss_pred CHHH-HHHHHHhh------CCeEEecCCCC-chhHHHHHHHH
Confidence 7754 66677665 56666665554 89999998753
No 55
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=92.03 E-value=3.5 Score=42.87 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=21.0
Q ss_pred ccEEEEEcCCceEEEEEcCCCceEEeccccc
Q 042742 186 FPYLLVNIGSGVSMIKVDGDGKFERVSGTNV 216 (834)
Q Consensus 186 ~PyLlVNIGSGvSiikV~~~~~f~RvgGtsi 216 (834)
.|.|+|..||.+++=.| .++ +++||.-+
T Consensus 122 ~~~iVvD~GTA~T~d~v-~~g--~~lGG~I~ 149 (249)
T 3bex_A 122 KNGIIIDMGTATTVDLV-VNG--SYEGGAIL 149 (249)
T ss_dssp SCEEEEEESSEEEEEEE-ETT--EEEEEEEE
T ss_pred CCEEEEEcCCceEEEEE-eCC--eEeeEEEC
Confidence 58999999999998777 544 45666543
No 56
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.00 E-value=2.3 Score=48.77 Aligned_cols=89 Identities=17% Similarity=0.075 Sum_probs=64.0
Q ss_pred cccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecccccCcchhHHHHHHHHhhc
Q 042742 256 ASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRF--GLKRIFFGGFFIRGHAYTMDTISFAVQFW 333 (834)
Q Consensus 256 ~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~--~i~~I~f~G~fi~~~~~~m~~ls~ai~fw 333 (834)
+++-++-||-- ...+++|++++++..|++.+-++--...+.. .+++|+.+|+..+|+. -|+.++-.+
T Consensus 358 ~~arG~~~Glt-------~~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~-~~Qi~ADvl--- 426 (526)
T 3ezw_A 358 PYARGAIFGLT-------RGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNF-LMQFQSDIL--- 426 (526)
T ss_dssp TTCCEEEEEEC-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHH-HHHHHHHHH---
T ss_pred cccCeEEecCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHH-HHHHHHHHH---
Confidence 45555566621 2568999999999999999888765444433 5689999999887764 566676665
Q ss_pred cCCCceEeeccCCchhhHHHHHhccc
Q 042742 334 SKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 334 s~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
++.+.-++..+ .+|+||++.+.
T Consensus 427 ---g~pV~~~~~~E-~~alGAA~lA~ 448 (526)
T 3ezw_A 427 ---GTRVERPEVRE-VTALGAAYLAG 448 (526)
T ss_dssp ---TSEEEEESCCC-HHHHHHHHHHH
T ss_pred ---CCEEEeCCCCc-hHHHHHHHHHH
Confidence 66676666554 68999998753
No 57
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=91.35 E-value=4.4 Score=46.71 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=62.8
Q ss_pred cccccccccccccccccccCCChhHH---HHHHHHHHHHHHHHHHHHHHH-HcCCCEEEEecccccCcchhHHHHHHHHh
Q 042742 256 ASTIASSFGKTISDKKELADYRPEDI---SLSLLRMISYNIGQISYLNAL-RFGLKRIFFGGFFIRGHAYTMDTISFAVQ 331 (834)
Q Consensus 256 ~d~iASsFGK~~~~~~~~~~~~~eDi---a~SLl~mI~~nIgqlA~l~A~-~~~i~~I~f~G~fi~~~~~~m~~ls~ai~ 331 (834)
++.-++-||-- ...+++|+ +++++.-|++.+-++.-...+ -..+++|+.+|+..+|.. -|+.++-..
T Consensus 396 ~~arg~~~Gl~-------~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~-~~Qi~ADv~- 466 (554)
T 3l0q_A 396 PNLTGIITGLK-------LSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPI-FVQEHANAT- 466 (554)
T ss_dssp TTCCCEECSCC-------SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHH-HHHHHHHHH-
T ss_pred CCCcEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHH-HHHHHHHhh-
Confidence 45555666632 24689999 779999999999887543332 123578999999887664 566677665
Q ss_pred hccCCCceEeeccCCchhhHHHHHhccc
Q 042742 332 FWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 332 fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
++.+..++..+ .+|+||++.+.
T Consensus 467 -----g~pV~~~~~~e-~~alGAA~lA~ 488 (554)
T 3l0q_A 467 -----GCAMLLPEESE-AMLLGSAMMGT 488 (554)
T ss_dssp -----CCEEEEESCSC-HHHHHHHHHHH
T ss_pred -----CCeEEecCCCc-chHHHHHHHHH
Confidence 66776666554 89999998763
No 58
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=90.22 E-value=2.2 Score=49.13 Aligned_cols=160 Identities=9% Similarity=-0.063 Sum_probs=88.9
Q ss_pred EEEEEcCCceEEEEEcC-CC------ceEE--------ecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCC-----
Q 042742 188 YLLVNIGSGVSMIKVDG-DG------KFER--------VSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNR----- 247 (834)
Q Consensus 188 yLlVNIGSGvSiikV~~-~~------~f~R--------vgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~----- 247 (834)
-+.+++||+..+..+.+ +. -|.+ ..|+...||....-.+-..+..+++++.++|++-...
T Consensus 296 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~~~~~~~l~~~a~~~~~g~~gl~ 375 (538)
T 4bc3_A 296 DIAVSLGTSDTLFLWLQEPMPALEGHIFCNPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNL 375 (538)
T ss_dssp CEEEEESSSEEEEEEESSCCCCSSSEEEEETTEEEEEEEEEEESSSHHHHHHHHHHHSTTCHHHHHHHHHTSCTTGGGCE
T ss_pred cEEEEeccchheEEecCCCCCCCCcceEEeecCCCCEEEeehhhccchHHHHHHHHhcCCCHHHHHHHHhcCCCCCCCeE
Confidence 57788998876654432 10 1111 1122233444432233333457899999998663321
Q ss_pred --CCC-CCCCCcccccccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecccccCcchh
Q 042742 248 --DHR-HIGLSASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG--LKRIFFGGFFIRGHAYT 322 (834)
Q Consensus 248 --dy~-~~GL~~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~--i~~I~f~G~fi~~~~~~ 322 (834)
.|- ....| ..-++.+..... ......+++|++|+++..|++.+-.+.-.. ...+ +++|+.+|+..+|.. -
T Consensus 376 ~lp~~~Ger~P-~~~G~~~~~~~~--~g~~~~~~~~l~RAvlEgia~~~r~~~~~l-~~~g~~~~~i~~~GGga~s~~-~ 450 (538)
T 4bc3_A 376 GFYFDVMEITP-EIIGRHRFNTEN--HKVAAFPGDVEVRALIEGQFMAKRIHAEGL-GYRVMSKTKILATGGASHNRE-I 450 (538)
T ss_dssp EEEESSCCSSS-CCCEEEEECTTS--CEESCCCHHHHHHHHHHHHHHHHHHHHHHT-TCCCCTTCCEEEEEGGGGCHH-H
T ss_pred EeecCCCCcCC-CCCceeeecccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHh-hhcCCCCCeEEEEcchhcCHH-H
Confidence 111 11122 111111111000 001125789999999999999987653211 1222 478999898887665 5
Q ss_pred HHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 323 MDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 323 m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
|+.++-.+ ++.+..++..+ .+|+||++.+.
T Consensus 451 ~Qi~ADv~------g~pV~~~~~~e-~~alGaA~lA~ 480 (538)
T 4bc3_A 451 LQVLADVF------DAPVYVIDTAN-SACVGSAYRAF 480 (538)
T ss_dssp HHHHHHHH------TSCEEECCCTT-HHHHHHHHHHH
T ss_pred HHHHHHHh------CCceEecCCCC-chHHHHHHHHH
Confidence 66677665 56666666554 89999998763
No 59
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=89.71 E-value=11 Score=39.66 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=54.9
Q ss_pred ccEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCcccccccccc
Q 042742 186 FPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGK 265 (834)
Q Consensus 186 ~PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK 265 (834)
.|.|+|..||-++|=.|+.++ +++||.-+=| - +|+ ++-+.+-+++=...+ +. .-.+.||+
T Consensus 125 ~~~iVVD~GTA~T~d~v~~~g--~~lGG~I~PG-i--~l~--------~~aL~~~Ta~Lp~v~-----~~--~~~~~~g~ 184 (266)
T 3djc_A 125 QNIIVIDFGTATTFCAISHKK--AYLGGAILPG-L--RLS--------ADALSKNTAKLPSVE-----II--KTESVVGR 184 (266)
T ss_dssp SEEEEEEESSEEEEEEECTTS--EEEEEEEEEC-H--HHH--------HHHHHHSCSSCCCCC-----CC--CCSCSCBS
T ss_pred CCEEEEECCCeeEEEEEcCCC--cEEEEEECcc-H--HHH--------HHHHHHhhhcCCCcc-----cC--CCCCcCCC
Confidence 489999999999999998754 4566654333 1 111 222222222211101 10 11134554
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHH--cCC-CEEEEecccc
Q 042742 266 TISDKKELADYRPEDISLSLLRMISYNIGQISYLNALR--FGL-KRIFFGGFFI 316 (834)
Q Consensus 266 ~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~--~~i-~~I~f~G~fi 316 (834)
-+.+-|..++++....-|-.+.-...+. .+- -+|+.||+..
T Consensus 185 ----------nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a 228 (266)
T 3djc_A 185 ----------STIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFA 228 (266)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTG
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCCh
Confidence 2456677777776666555544433444 443 4688888764
No 60
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=89.33 E-value=0.76 Score=55.33 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=63.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC-Cchhh--H
Q 042742 275 DYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH-EGFLG--A 351 (834)
Q Consensus 275 ~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h-~gy~G--A 351 (834)
+.+++|||+|....++..+..++...++.+|+++|+++|+...|..+...+.... .+.+.++++++. +--=| |
T Consensus 663 g~~~~dIAasFq~ala~~L~~~~~~a~~~~g~~~VvLsGGVa~N~~Lr~~L~~~l----~~~g~~v~~p~~~p~~DgGia 738 (761)
T 3vth_A 663 GFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLIEKL----SLSGFEVYSNSKVPCNDGGIS 738 (761)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGSHHHHHHHHHHH----HHTTCEEEECSSSCSSGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHHHHHHHHHHHHH----HhCCCEEEecCCCCCCchHHH
Confidence 5689999999999999999999999999999999999999999998876543322 234678877543 21223 8
Q ss_pred HHHHhccc
Q 042742 352 LGAFMSYE 359 (834)
Q Consensus 352 lGA~L~~~ 359 (834)
||.++.+.
T Consensus 739 lGQA~~a~ 746 (761)
T 3vth_A 739 LGQAVIAN 746 (761)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887653
No 61
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=88.16 E-value=2.9 Score=44.40 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=71.1
Q ss_pred ccEEEEEcCCceE-EEEEcCCCc--eEEeccc-ccCchhHHHHHHhhcC----CCCHHHHHHHhcCCCCCCCCCCCCCcc
Q 042742 186 FPYLLVNIGSGVS-MIKVDGDGK--FERVSGT-NVGGGTYWGLGRLLTK----CKSFDELLELSQRGDNRDHRHIGLSAS 257 (834)
Q Consensus 186 ~PyLlVNIGSGvS-iikV~~~~~--f~RvgGt-siGGGTf~GL~~LLtg----~~~fdeil~LA~~Gd~~dy~~~GL~~d 257 (834)
...++|.||.||+ +..+.+ +. ....+|+ .+||..|---...... .-+.+++.++-+.+..
T Consensus 164 ~~~~vvDiGggttd~~v~~~-g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i~~~~ae~~lk~~~~----------- 231 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMG-KLSGISKIYGDSSLGVSLVTSAVKDALSLARTKGSSYLADDIIIHRKD----------- 231 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEG-GGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGGGHHHHHHHHHTTTC-----------
T ss_pred CCEEEEEcCCCeEEEEEEeC-CeeEEeeecCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhhh-----------
Confidence 3589999999999 444433 33 3334555 7899887654433331 1233334333233321
Q ss_pred cccccccccccccccccCCChhH---HHHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEecccccCcchhHHHHHHHHhhc
Q 042742 258 TIASSFGKTISDKKELADYRPED---ISLSLLRMISYNIGQISYLNALR-FGLKRIFFGGFFIRGHAYTMDTISFAVQFW 333 (834)
Q Consensus 258 ~iASsFGK~~~~~~~~~~~~~eD---ia~SLl~mI~~nIgqlA~l~A~~-~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw 333 (834)
..+|.... +. ....++ +....+..+.+.|-+. .+. ..++.|+++|+-.+- ....++ +.+
T Consensus 232 ---~~~~~~~i-~~---~~~~~~~~~~i~~~~~~~~~~i~~~----i~~~~~~~~vvl~GGga~l---l~~~l~---~~~ 294 (320)
T 2zgy_A 232 ---NNYLKQRI-ND---ENKISIVTEAMNEALRKLEQRVLNT----LNEFSGYTHVMVIGGGAEL---ICDAVK---KHT 294 (320)
T ss_dssp ---HHHHHHHS-SS---SCTHHHHHHHHHHHHHHHHHHHHHH----HTTCCCCCEEEEESTTHHH---HHHHHH---HTS
T ss_pred ---hhccccee-cC---chhhHHHHHHHHHHHHHHHHHHHHH----HHhhcCCCeEEEECChHHH---HHHHHH---HHh
Confidence 11221100 00 011222 3333344333333332 222 366889998875432 112222 233
Q ss_pred cCCCceEeeccCCchhhHHHHHhc
Q 042742 334 SKGEAQAMFLRHEGFLGALGAFMS 357 (834)
Q Consensus 334 s~g~~~a~Fl~h~gy~GAlGA~L~ 357 (834)
....-++..+.++.|+.|+||++.
T Consensus 295 ~~~~~~~~~~~~P~~a~A~G~~~~ 318 (320)
T 2zgy_A 295 QIRDERFFKTNNSQYDLVNGMYLI 318 (320)
T ss_dssp CCCGGGEECCSCGGGHHHHHHHHH
T ss_pred CCCCCceeeCCCcHHHHHHHHHHh
Confidence 211115778899999999999874
No 62
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=87.04 E-value=2.9 Score=46.60 Aligned_cols=47 Identities=6% Similarity=-0.168 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHcCCCEEEEecccccCcchhHHHH
Q 042742 280 DISLSLLRMISYNIGQI-SYLNALRFGLKRIFFGGFFIRGHAYTMDTI 326 (834)
Q Consensus 280 Dia~SLl~mI~~nIgql-A~l~A~~~~i~~I~f~G~fi~~~~~~m~~l 326 (834)
.-|+-.+.+.+++|..- +.+.|..-+++.|+|||+.-.|.+.....+
T Consensus 297 ~~A~la~d~f~yriak~Iga~aa~LG~vDaIVfTGGIgEns~~vr~~I 344 (398)
T 4ijn_A 297 EHAKLAYDVYIHRLRKYIGAYMAVLGRTDVISFTAGVGENVPPVRRDA 344 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCccccccHHHHHHH
Confidence 35778888888888654 344444469999999999887776443333
No 63
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=86.79 E-value=2.6 Score=46.64 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 281 ISLSLLRMISYNIG-QISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 281 ia~SLl~mI~~nIg-qlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
-|+-.+.|.++.|. .++.+.|...+++-|+|||+.-.|.+.....+...+
T Consensus 288 ~A~lA~d~f~yri~k~IGa~aa~L~gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 288 LAKLAIEIFSHRVAKFVASYMIYFNKLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccccCcHHHHHHHHhhc
Confidence 36777888888875 456666777799999999998877764443343334
No 64
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=84.89 E-value=5.7 Score=44.29 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 281 ISLSLLRMISYNIG-QISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 281 ia~SLl~mI~~nIg-qlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
-|+-.+.|.++.|. +++.+.|...+++-|+|||+.-.|.+.....+...+
T Consensus 297 ~A~lA~d~f~yri~k~IGa~~a~LggvDaIVFTgGIGEns~~vR~~i~~~l 347 (403)
T 2iir_A 297 WCKLVLEIYDYRIAKYIGAYAAAMNGVDAIVFTAGVGENSPITREDVCSYL 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccccCCHHHHHHHHhhh
Confidence 46778888888886 678888888899999999998867765554444433
No 65
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=84.69 E-value=2 Score=47.77 Aligned_cols=46 Identities=11% Similarity=-0.070 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEecccccCcchhHHHH
Q 042742 281 ISLSLLRMISYNIGQ-ISYLNALRFGLKRIFFGGFFIRGHAYTMDTI 326 (834)
Q Consensus 281 ia~SLl~mI~~nIgq-lA~l~A~~~~i~~I~f~G~fi~~~~~~m~~l 326 (834)
-|+-.+.+.++.|.. |+.+.|..-+++-|+|||+.-.|.+.....+
T Consensus 289 ~A~lA~d~f~yri~k~Iga~aa~Lg~vDaIVfTGGIgens~~vR~~i 335 (391)
T 3r9p_A 289 AAQLAYSVFTHRLRKYIGAYLAVLGHTDVISFTAGIGENDAAVRRDA 335 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccccCCHHHHHHH
Confidence 477788888888865 4555566679999999999888766444333
No 66
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=83.92 E-value=29 Score=36.30 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=54.6
Q ss_pred ccEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCcccccccccc
Q 042742 186 FPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIASSFGK 265 (834)
Q Consensus 186 ~PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iASsFGK 265 (834)
.|.|+|..||-++|=.|+.++ +.+||.-+= |--+-+-+|..++. .+ -..+ +. .-.+.+|+
T Consensus 123 ~~~iVVD~GTAtT~d~v~~~g--~~lGG~I~P-Gi~l~~~AL~~~Ta---~L-------p~v~-----~~--~p~~~~g~ 182 (268)
T 2h3g_X 123 SPLIIVDFGTATTYCYINEEK--HYMGGVITP-GIMISAEALYSRAA---KL-------PRIE-----IT--KPSSVVGK 182 (268)
T ss_dssp SSEEEEEESSEEEEEEECTTS--EEEEEEEEE-CHHHHHHHHHC-----------------CC-----CC--CCSCSSCS
T ss_pred CCEEEEECCCceEEEEECCCC--cEEEEEECc-cHHHHHHHHHHHHh---cC-------CCcc-----cc--CCCCCCCc
Confidence 589999999999999998754 456665432 22222223322211 00 0000 10 01133443
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccc
Q 042742 266 TISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG-LKRIFFGGFF 315 (834)
Q Consensus 266 ~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~-i~~I~f~G~f 315 (834)
-+.+-|-.+++..+.--|-.+.-...+.++ --+|+.||+.
T Consensus 183 ----------nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~ 223 (268)
T 2h3g_X 183 ----------NTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGL 223 (268)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTT
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 245667777777776666544444455554 4578998875
No 67
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=81.95 E-value=3.2 Score=49.17 Aligned_cols=78 Identities=10% Similarity=0.054 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccC---CchhhH
Q 042742 275 DYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRH---EGFLGA 351 (834)
Q Consensus 275 ~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h---~gy~GA 351 (834)
+.+++|||++....++..+..++...++.+++++|+++|+...|..+...+. ... + +.++++.+. ..=.-|
T Consensus 569 g~~~~dIAasFh~ala~~L~~~~~ra~~~~g~~~VvLsGGV~~N~~Lre~L~-~~l----~-g~~v~~p~~~p~~DnGia 642 (657)
T 3ttc_A 569 QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA-HYL----A-DFTLLFPQSLPAGDGGLS 642 (657)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESGGGGCHHHHHHHH-HHT----T-TSEEECCCSSCSSGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHHHHHHHHHH-HHh----C-CCEEEecCCCCCCcHHHH
Confidence 5789999999999999999999999999999999999999999998876533 333 2 567766433 222345
Q ss_pred HHHHhcc
Q 042742 352 LGAFMSY 358 (834)
Q Consensus 352 lGA~L~~ 358 (834)
||.++.+
T Consensus 643 LGQA~~a 649 (657)
T 3ttc_A 643 LGQGVIA 649 (657)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766644
No 68
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=81.13 E-value=6 Score=44.22 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhh
Q 042742 281 ISLSLLRMISYNIG-QISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQF 332 (834)
Q Consensus 281 ia~SLl~mI~~nIg-qlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~f 332 (834)
-|+-.+.|.++.|. +|+.+.|..-+++-|+|||+.-.|.+.....+...+.|
T Consensus 297 ~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTgGIGEns~~vR~~i~~~l~~ 349 (408)
T 1g99_A 297 KAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDG 349 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHHHHCHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEECccccccCHHHHHHHHhhhhh
Confidence 46778888888877 67777888889999999999886666554444433433
No 69
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=78.54 E-value=6.5 Score=44.01 Aligned_cols=138 Identities=14% Similarity=0.160 Sum_probs=73.4
Q ss_pred cEEEEEcCCceEEEEEcCCCceEEecc-cccCchhHHHHHHhhcCCCCHHHHHHHhcCCCC-----CC--CCCCCCCccc
Q 042742 187 PYLLVNIGSGVSMIKVDGDGKFERVSG-TNVGGGTYWGLGRLLTKCKSFDELLELSQRGDN-----RD--HRHIGLSAST 258 (834)
Q Consensus 187 PyLlVNIGSGvSiikV~~~~~f~RvgG-tsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~-----~d--y~~~GL~~d~ 258 (834)
-.|++-+|+|.|+-.+.++...--.-| |.+ .|-+|| --+|.-|..-++.|.+++.- .+ +.+-||-+=+
T Consensus 211 ~lIv~HLGnGaSi~Ai~~GksVDTsMG~TpL-eGl~Mg---TRsGdiDp~~l~~L~~~~g~s~~ev~~~Lnk~SGLlGls 286 (415)
T 2e1z_A 211 GLIVAHLGNGASICAVRNGQSVDTSMGMTPL-EGLMMG---TRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGIS 286 (415)
T ss_dssp EEEEEEESSSEEEEEEETTEEEEESCCSSTT-SSSCCS---SCCCSCCHHHHHHHHHHHCCCHHHHHHHHHHSCHHHHHH
T ss_pred CEEEEEeCCchhhhheeCCEEEecCCCCCCC-CCCCCC---CCCCCCCHHHHHHHHHhcCCCHHHHHHHHhhccCcEEec
Confidence 478888999999999987433322222 221 233332 12455556666666544332 00 1111210000
Q ss_pred -ccccccccccccccccCCChhHHHHHHHHHHHHHHH-HHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHHhhc
Q 042742 259 -IASSFGKTISDKKELADYRPEDISLSLLRMISYNIG-QISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFW 333 (834)
Q Consensus 259 -iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIg-qlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fw 333 (834)
+-+.|=.+.... + .-..-|+-.+.|.++.|. +|+.+.|..-+++-|+|||+.-.|.+.....+...+.|.
T Consensus 287 G~s~D~R~l~~~~---~--~Gd~~A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l~~l 358 (415)
T 2e1z_A 287 GLSSDLRVLEKAW---H--EGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVL 358 (415)
T ss_dssp SSCSCHHHHHHHH---H--TTCHHHHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTTGGG
T ss_pred CCCCCHHHHHHHH---H--CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhHhhc
Confidence 001111111000 0 112346778888888877 677777888889999999998866665544454444443
No 70
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=76.31 E-value=16 Score=40.73 Aligned_cols=155 Identities=14% Similarity=0.064 Sum_probs=80.9
Q ss_pred cEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcC-CCCCCCCCCCCCccc-cc-ccc
Q 042742 187 PYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQR-GDNRDHRHIGLSAST-IA-SSF 263 (834)
Q Consensus 187 PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~-Gd~~dy~~~GL~~d~-iA-SsF 263 (834)
-.++|.||.|++=+.+-.++...+.+-..+||--|---...-.+ .++++.-++=.+ |.. .+ . .+.+. +- ...
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dIa~~l~-~~~~~AE~iK~~~g~a-~~-~--~~~~~~i~v~~~ 281 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSAVLD-TSFEESERLIITHGNA-VY-N--DLKEEEIQYRGL 281 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHHHHHHT-CCHHHHHHHHHHHCCS-CC-T--TCCCCEEEEECT
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHHHHHHC-CCHHHHHHHHHHhccC-cc-c--CCCCceEEEeec
Confidence 48999999999955554456777777789999988765554445 346654433221 221 00 0 00000 00 011
Q ss_pred cccccccccccCCChhH---HHHHHHHHHHHHHHHHHHHHHHHcC-----------CCEEEEecccccCcchhHHHHHHH
Q 042742 264 GKTISDKKELADYRPED---ISLSLLRMISYNIGQISYLNALRFG-----------LKRIFFGGFFIRGHAYTMDTISFA 329 (834)
Q Consensus 264 GK~~~~~~~~~~~~~eD---ia~SLl~mI~~nIgqlA~l~A~~~~-----------i~~I~f~G~fi~~~~~~m~~ls~a 329 (834)
|. ... ...++++ +.+..+.-+...|-+. -+..+ +..||++|+-.+-+-+.. .++..
T Consensus 282 ~~--~~~---~~is~~~l~~ii~p~veei~~~V~~~----L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e-~~~~~ 351 (419)
T 4a2a_A 282 DG--NTI---KTTTAKKLSVIIHARLREIMSKSKKF----FREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINE-LATEV 351 (419)
T ss_dssp TS--CSE---EEEEHHHHHHHHHHHHHHHHHHHHHH----HHHHTTCC--------TTCEEEESGGGGSTTHHH-HHHHH
T ss_pred CC--ccc---eEEcHHHHHHHHHHHHHHHHHHHHHH----HHHcCCCcccccccccCCEEEEECchhchhhHHH-HHHHH
Confidence 10 000 1234443 3333444443333332 22233 467999998887776544 33333
Q ss_pred HhhccCCCceEee---------------ccCCchhhHHHHHhcccc
Q 042742 330 VQFWSKGEAQAMF---------------LRHEGFLGALGAFMSYEK 360 (834)
Q Consensus 330 i~fws~g~~~a~F---------------l~h~gy~GAlGA~L~~~~ 360 (834)
+ ...++..- ++++.|++|+|-++.+..
T Consensus 352 ~----g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 352 F----KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp H----TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred H----CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 3 11233222 479999999999997754
No 71
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=75.31 E-value=36 Score=36.40 Aligned_cols=155 Identities=12% Similarity=0.043 Sum_probs=75.9
Q ss_pred cEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhc-CCCC-CCCCCCCCCccccccccc
Q 042742 187 PYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQ-RGDN-RDHRHIGLSASTIASSFG 264 (834)
Q Consensus 187 PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~-~Gd~-~dy~~~GL~~d~iASsFG 264 (834)
.+++|.||.|++=+-+-..++....+...+||..|-.....-.+. ++++.-++-. -|.. .+... . ...+ .++
T Consensus 192 ~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~~~~~~-~~~~aE~~K~~~~~~~~~~~~--~-~~~i--~~~ 265 (377)
T 2ych_A 192 VFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNL-DLLAAEEVKRTYGMATLPTED--E-ELLL--DFD 265 (377)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHHHTTC-CHHHHHHHHHHTC---------------------
T ss_pred eEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHHHHhCC-CHHHHHHHHhhcccccccccc--c-cccc--ccc
Confidence 479999999999444433456666777889999887655544443 4655433221 1111 00000 0 0000 011
Q ss_pred ccccccccccCCCh---hHHHHHHHHHHHHHHHHHHHHH-HH--HcCCCEEEEecccccCcchhHHHHHHHHhhccCCCc
Q 042742 265 KTISDKKELADYRP---EDISLSLLRMISYNIGQISYLN-AL--RFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEA 338 (834)
Q Consensus 265 K~~~~~~~~~~~~~---eDia~SLl~mI~~nIgqlA~l~-A~--~~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~ 338 (834)
. .. ...++ +++....+.-+...|-+.--.+ +. ...+++|+++|+-.+-+.+.- .++..+. ..+
T Consensus 266 ~---~~---~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~-~l~~~l~----~~v 334 (377)
T 2ych_A 266 A---ER---ERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLAS-LLTDTLG----VNL 334 (377)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHH-HHHHHHT----SEE
T ss_pred c---cc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHH-HHHHHhC----CCe
Confidence 0 00 01222 3344444444444444332111 22 235789999998888776554 3443331 111
Q ss_pred eEe------------------eccCCchhhHHHHHhcc
Q 042742 339 QAM------------------FLRHEGFLGALGAFMSY 358 (834)
Q Consensus 339 ~a~------------------Fl~h~gy~GAlGA~L~~ 358 (834)
+.. -..++.|+.|+|.++.+
T Consensus 335 ~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~ 372 (377)
T 2ych_A 335 EPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRG 372 (377)
T ss_dssp EECCGGGGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCchhhcccCcccCCHHHHHhhhHHHHHHHHHHHcC
Confidence 110 13467899999999864
No 72
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=73.95 E-value=15 Score=40.86 Aligned_cols=51 Identities=12% Similarity=-0.050 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 280 DISLSLLRMISYNIG-QISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 280 Dia~SLl~mI~~nIg-qlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
.-|+-.+.|.++.|. .|+.+.|.+.|++-|+|||+.-.|.+.....+...+
T Consensus 300 ~~A~lA~d~f~yri~k~IGa~aa~L~GvDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 300 KTCQLAFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccccCcHHHHHHHHhhh
Confidence 357777888888875 457777888999999999988666554433343333
No 73
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=70.41 E-value=8.1 Score=42.01 Aligned_cols=50 Identities=12% Similarity=-0.096 Sum_probs=36.1
Q ss_pred cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 304 FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 304 ~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..++.|+++|+..+.+.+.. .+... + ++.++.-..++.++-|+||++.+.
T Consensus 350 ~~i~~VvLvGG~s~~p~l~~-~l~~~---~--~~~~v~~~~~p~~ava~Gaa~~a~ 399 (404)
T 3i33_A 350 GQIQEIVLVGGSTRIPKIQK-LLQDF---F--NGKELNKSINPDEAVAYGAAVQAA 399 (404)
T ss_dssp GGCCEEEEESGGGGCHHHHH-HHHHH---T--TTCCCBCSSCTTTHHHHHHHHHHH
T ss_pred hhCCEEEEECCccccHHHHH-HHHHH---c--CCCCCCCCcCHHHHHHHHHHHHHH
Confidence 35688999999999886554 34332 2 244566677999999999998753
No 74
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=69.83 E-value=7.7 Score=43.95 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=27.7
Q ss_pred CCCCCc--cCCCCCCCCceEEEEeccceeEEEEEeec
Q 042742 26 VKNPTI--LLPNQSDDISHLALDIGGSLIKLVYFSRH 60 (834)
Q Consensus 26 ~~~~~i--~l~~~~~~~~~~giDIGGSL~Kivy~~~~ 60 (834)
.+-|+. .+|+..|.-..+|||||||.+|++.++..
T Consensus 45 ~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 45 PMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp CCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEE
T ss_pred ccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeC
Confidence 333444 37888888889999999999999998754
No 75
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=68.97 E-value=13 Score=41.79 Aligned_cols=74 Identities=7% Similarity=-0.083 Sum_probs=54.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHH
Q 042742 275 DYRPEDISLSLLRMISYNIGQISYLNALR--FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGAL 352 (834)
Q Consensus 275 ~~~~eDia~SLl~mI~~nIgqlA~l~A~~--~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAl 352 (834)
..+++|++++++..|++.+-++--...+. ..+++|+.+|+..+|.. -|+.++-.. ++.+.-... -.+|+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~-~~Qi~ADvl------g~pV~~~~~--e~~al 431 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTL-LNQLCADAC------GIRVIAGPV--EASTL 431 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHH-HHHHHHHHH------TSEEEECCT--THHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHH-HHHHHHHHH------CCeeecCCc--cHhHH
Confidence 56899999999999999998876655553 45689999999987775 456676665 556654443 46899
Q ss_pred HHHhc
Q 042742 353 GAFMS 357 (834)
Q Consensus 353 GA~L~ 357 (834)
||++.
T Consensus 432 Gaa~~ 436 (489)
T 2uyt_A 432 GNIGI 436 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99544
No 76
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=58.46 E-value=33 Score=38.41 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=68.5
Q ss_pred cEEEEEcCCceEEEEEcCCCceEEecccccC----chhHHHHHHhhcCCCCHHHHHHHhcCCCC-------CCCCCCCCC
Q 042742 187 PYLLVNIGSGVSMIKVDGDGKFERVSGTNVG----GGTYWGLGRLLTKCKSFDELLELSQRGDN-------RDHRHIGLS 255 (834)
Q Consensus 187 PyLlVNIGSGvSiikV~~~~~f~RvgGtsiG----GGTf~GL~~LLtg~~~fdeil~LA~~Gd~-------~dy~~~GL~ 255 (834)
-.|++-+|+|.|+-.+.++..+- |++| .|-++| --+|.-|...++.|.+++.- .-|.+-||-
T Consensus 220 ~lIv~HLGnGaSi~Ai~~GksvD----TsMG~TpleGl~mg---tRsGdiDp~~l~~l~~~~g~s~~ei~~~Lnk~SGLl 292 (415)
T 3sk3_A 220 NIITCHLGNGGSVSAIRNGKCVD----TSMGLTPLEGLVMG---TRSGDIDPAIIFHLHDTLGMSVDQINKMLTKESGLL 292 (415)
T ss_dssp CEEEEECSSSCEEEEEETTEEEE----ECCCCCCSCC----------CCCCHHHHHHHHHHHTCCHHHHHHHC------C
T ss_pred cEEEEEeCCCceEEEEECCEEEE----eCCCcCCCCCccCC---CCCCCCChHHHHHHHHhcCCCHHHHHHHHhcCcCcc
Confidence 47888899999999998742222 4444 355544 22455556666666554332 001122221
Q ss_pred cccccccccccccccccccCCChhHHHHHHHHHHHHHHH-HHHHHHHHHcC-CCEEEEecccccCcchhHHHHH
Q 042742 256 ASTIASSFGKTISDKKELADYRPEDISLSLLRMISYNIG-QISYLNALRFG-LKRIFFGGFFIRGHAYTMDTIS 327 (834)
Q Consensus 256 ~d~iASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIg-qlA~l~A~~~~-i~~I~f~G~fi~~~~~~m~~ls 327 (834)
+=+=-||--+.. .+ .....+-|+-.+.|.++.|. +|+.+.|...| ++-|+|||+.-.|.+..-..+.
T Consensus 293 glsG~S~D~R~l--e~---~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~ 361 (415)
T 3sk3_A 293 GLTEVTSDCRYV--ED---NYATKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSL 361 (415)
T ss_dssp CSTTTTCGGGCS--SC---CCCCHHHHHHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHH
T ss_pred cccCCcchHHHH--HH---HHcCCHhHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHH
Confidence 111002221111 11 11223346777888888875 56666777778 9999999999888876544443
No 77
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=53.43 E-value=15 Score=39.36 Aligned_cols=43 Identities=9% Similarity=0.004 Sum_probs=34.7
Q ss_pred CcEEEeCCccccchhHHHHHhCCCcccc-hhhHHHHHHHHHHHh
Q 042742 119 GGIHATGGGAYKFADLFKERLGVSLDKE-DEMDCLVAGANFLLK 161 (834)
Q Consensus 119 ~~i~~TGGGA~k~~~~~~~~lgi~~~k~-dEm~cli~G~~fLl~ 161 (834)
..|.+|||||.-+.+.+++.+++++... |=..|.+.|..-++.
T Consensus 280 ~~IvltGGGA~l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 280 DSLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp SEEEEESTTHHHHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred cEEEEECChHHHHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 3599999999988999999999655444 467799999887764
No 78
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=51.09 E-value=49 Score=37.18 Aligned_cols=50 Identities=6% Similarity=-0.069 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHc------CCCEEEEecccccCcchhHHHHHHHH
Q 042742 281 ISLSLLRMISYNIGQ-ISYLNALRF------GLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 281 ia~SLl~mI~~nIgq-lA~l~A~~~------~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
-|+-.+.|.++.|.. ++.+.|... +++-|+|||+.=-|.+.....+...+
T Consensus 321 ~A~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l 377 (438)
T 4h0p_A 321 KAKLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKL 377 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhH
Confidence 477788888888854 455666665 79999999988544443333333333
No 79
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=48.46 E-value=32 Score=37.97 Aligned_cols=160 Identities=15% Similarity=0.087 Sum_probs=89.3
Q ss_pred ccEEEEEcCCceE-EEEEcCCCceEEecc--cccCchhHHHHHHhhcCCCCHHHHHHHhcCCCC----------CCCCCC
Q 042742 186 FPYLLVNIGSGVS-MIKVDGDGKFERVSG--TNVGGGTYWGLGRLLTKCKSFDELLELSQRGDN----------RDHRHI 252 (834)
Q Consensus 186 ~PyLlVNIGSGvS-iikV~~~~~f~RvgG--tsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~----------~dy~~~ 252 (834)
.|-.++||| |++ |-.+..++. +-| |+=|-.-+=-.++..+| ..||+=-++|++|.- ..|-..
T Consensus 156 ~~r~~lNIG-GIaNiT~l~~~~~---v~afDtGPgN~liD~~~~~~~~-~~yD~dG~~A~~G~v~~~lL~~ll~~pyf~~ 230 (371)
T 3qbx_A 156 TSRAVLNIG-GFSNVSLLSPGKP---VRGFDCGPGNVLMDAWIHHQRG-EHFDRDGAWAASGQVNHALLASLLADEFFAA 230 (371)
T ss_dssp -CEEEEEES-SEEEEEEECTTSC---CEEEEEEESSHHHHHHHHHHHC-CSSCGGGHHHHTSCCCHHHHHHHHTSHHHHC
T ss_pred CceEEEecC-CceEEEEeCCCCC---EEEEecCccHHHHHHHHHHHhC-CCcccCcchhcCCCcCHHHHHHHhcCchhcC
Confidence 467899999 455 444433221 222 33344444556666788 669999999999985 123221
Q ss_pred CCCccccccccccccccc--ccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 253 GLSASTIASSFGKTISDK--KELADYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 253 GL~~d~iASsFGK~~~~~--~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
.-|+++===-|+.-.... ....+.++||+.+.|....+..|.+--..+. ...++||++|+-.+|..+ |+.|+...
T Consensus 231 ~pPKStGRE~F~~~~l~~~l~~~~~ls~~Dv~ATLt~~TA~sIa~~~~~~~--~~~~~v~vcGGGa~N~~L-m~~L~~~l 307 (371)
T 3qbx_A 231 RGPKSTGRERFNLPWLQEHLARHPALPAADIQATLLELSARSISESLLDAQ--PDCEEVLVCGGGAFNTAL-MKRLAMLM 307 (371)
T ss_dssp CSSCCCCTTTSSHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHHHHC--TTCCEEEEESGGGGCHHH-HHHHHHHC
T ss_pred CCCCccCHHHhCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhcc--CCCceEEEECCccCcHHH-HHHHHHhC
Confidence 122222112233110000 0012578999999999999999987643222 236899999888888764 55566443
Q ss_pred hhccCCCceEeeccC----CchhhHHHHHhcc
Q 042742 331 QFWSKGEAQAMFLRH----EGFLGALGAFMSY 358 (834)
Q Consensus 331 ~fws~g~~~a~Fl~h----~gy~GAlGA~L~~ 358 (834)
+ ..++.-... +.|.-|+.-++.+
T Consensus 308 ----~-~~~v~~~d~~Gi~~d~~EA~aFA~LA 334 (371)
T 3qbx_A 308 ----P-EARVASTDEYGIPPAWMEGMAFAWLA 334 (371)
T ss_dssp ----T-TSEEEEGGGGTCCTTTHHHHHHHHHH
T ss_pred ----C-CCEEeCHHHcCCChhHHHHHHHHHHH
Confidence 2 244443333 4566666655543
No 80
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=40.84 E-value=16 Score=44.87 Aligned_cols=77 Identities=10% Similarity=-0.019 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc--CC------CEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHH
Q 042742 281 ISLSLLRMISYNIGQISYLNALRF--GL------KRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGAL 352 (834)
Q Consensus 281 ia~SLl~mI~~nIgqlA~l~A~~~--~i------~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAl 352 (834)
+|..++.-.+.-++.--.-..... +- ..|+++|++...++.-...+..+++=+- ...++.+. ...=.|.+
T Consensus 374 ~a~~v~~raa~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~-~~~~~~i~-~a~dgs~~ 451 (917)
T 1cza_N 374 VCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLV-PDSDVRFL-LSESGSGK 451 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHC-TTEEEEEE-ECTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhc-CCCceEEE-EeccchHH
Confidence 666666555554443222222222 22 4688899999887766666666666333 23343333 24667888
Q ss_pred HHHhccc
Q 042742 353 GAFMSYE 359 (834)
Q Consensus 353 GA~L~~~ 359 (834)
||++.+.
T Consensus 452 GAA~laa 458 (917)
T 1cza_N 452 GAAMVTA 458 (917)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887664
No 81
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=39.67 E-value=28 Score=39.99 Aligned_cols=50 Identities=14% Similarity=-0.029 Sum_probs=36.2
Q ss_pred cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 304 FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 304 ~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..++.|+++|+..+.+.+.- .++. ++ ++.++....++.++-|+||++.+.
T Consensus 329 ~~i~~VvLvGG~srip~v~~-~l~~---~f--~~~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 329 SQIHDIVLVGGSTRIPKIQK-LLQD---FF--NGKELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp GGCCEEEEESGGGGCHHHHH-HHHH---HT--TTCCCBCCSCTTTHHHHHHHHHHH
T ss_pred hhCcEEEEECCcccChHHHH-HHHH---Hc--CCCccccCCCchhHHHHHHHHHHH
Confidence 45789999999999876544 3433 22 234556677899999999999764
No 82
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=33.20 E-value=91 Score=36.82 Aligned_cols=49 Identities=16% Similarity=-0.084 Sum_probs=36.9
Q ss_pred cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 304 FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 304 ~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..++.|+++|+..+.+.+.- .++.. + +..+....++.++-|+||++.+.
T Consensus 333 ~~I~~VvLvGGssriP~v~~-~l~~~---f---g~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 333 EEVDFVEIIGGTTRIPTLKQ-SISEA---F---GKPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp GGCCEEEEESGGGGSHHHHH-HHHHH---H---TSCEECCSCTTTHHHHHHHHHHH
T ss_pred hhCcEEEEECCCccChHHHH-HHHHh---c---CCCccccCCcchHHHHHHHHHHH
Confidence 35789999999999887554 34333 2 34667788999999999998764
No 83
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=32.97 E-value=36 Score=36.31 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=31.3
Q ss_pred ceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEec
Q 042742 658 KRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVAN 694 (834)
Q Consensus 658 k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK 694 (834)
-||++++...+ --+.-++|++++|.++|++|+++.-
T Consensus 21 MrIl~~~~~~~-Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 21 MRVLFVSSPGI-GHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CEEEEECCSSH-HHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCc-chHhHHHHHHHHHHHCCCEEEEecc
Confidence 48999998755 6778899999999999999999875
No 84
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=32.67 E-value=24 Score=40.21 Aligned_cols=30 Identities=27% Similarity=0.435 Sum_probs=24.6
Q ss_pred cCCCCCCCCceEEEEeccceeEEEEEeecC
Q 042742 32 LLPNQSDDISHLALDIGGSLIKLVYFSRHE 61 (834)
Q Consensus 32 ~l~~~~~~~~~~giDIGGSL~Kivy~~~~~ 61 (834)
.+|+-.|.-..+|||+|||..|++.++-.+
T Consensus 72 ~lP~G~E~G~~LalDlGGTn~Rv~~V~l~g 101 (485)
T 3o8m_A 72 EYPTGKETGDFLALDLGGTNLRVVLVKLGG 101 (485)
T ss_dssp SCCCSCCEEEEEEEEESSSEEEEEEEEEES
T ss_pred CCCCCCcceEEEEEEecCCeEEEEEEEECC
Confidence 367766777899999999999999987543
No 85
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=32.57 E-value=43 Score=37.89 Aligned_cols=70 Identities=10% Similarity=0.007 Sum_probs=50.7
Q ss_pred hHHHHHHHHH--HHHHHHHHHHHHHHHcCCCEEEEecccccCcchhHHHHHHH-HhhccCCCceEeeccCCchhhHHHHH
Q 042742 279 EDISLSLLRM--ISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFA-VQFWSKGEAQAMFLRHEGFLGALGAF 355 (834)
Q Consensus 279 eDia~SLl~m--I~~nIgqlA~l~A~~~~i~~I~f~G~fi~~~~~~m~~ls~a-i~fws~g~~~a~Fl~h~gy~GAlGA~ 355 (834)
+|++++++.. |++.+-.+-- .....++|+.+|+..+|+ +-|+.++-. . ++.+..++..+ .+|+||+
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~---~~~~~~~i~~~GG~a~s~-~w~Qi~ADv~~------g~pV~~~~~~e-~~alGAA 430 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALD---LIGSTGRILVEGRFAEAD-VFVRALASLRP------DCAVYTANAHN-DVSFGAL 430 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH---HTTCCSEEEEESGGGGCH-HHHHHHHHHST------TSEEEEESSCC-CTTGGGH
T ss_pred HHHHHHHHHHHhHHHHHHHHHH---HhcCCCeEEEeCCcccCH-HHHHHHhhhcC------CCeEEEcCCCc-hHHHHHH
Confidence 7999999996 7887766532 223448899999988765 556667655 4 66777776655 7899999
Q ss_pred hccc
Q 042742 356 MSYE 359 (834)
Q Consensus 356 L~~~ 359 (834)
+.+.
T Consensus 431 ~lA~ 434 (482)
T 3h6e_A 431 RLID 434 (482)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8764
No 86
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=31.28 E-value=37 Score=35.92 Aligned_cols=34 Identities=29% Similarity=0.415 Sum_probs=29.6
Q ss_pred eEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEe
Q 042742 659 RALLFVDNSGADVVLGMLPLARELLRRGTEVVLVA 693 (834)
Q Consensus 659 ~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~v 693 (834)
||++++...+ --+..++|++++|.++|++|+++.
T Consensus 3 rIl~~~~~~~-gh~~~~~~la~~L~~~GheV~v~~ 36 (391)
T 3tsa_A 3 RVLVVPLPYP-THLMAMVPLCWALQASGHEVLIAA 36 (391)
T ss_dssp EEEEECCSCH-HHHHTTHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCCCc-chhhhHHHHHHHHHHCCCEEEEec
Confidence 7888887755 677888999999999999999987
No 87
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=30.72 E-value=46 Score=35.71 Aligned_cols=43 Identities=23% Similarity=0.175 Sum_probs=32.4
Q ss_pred CcEEEeCCccccchhHHHHHhCCCcc---cchhhHHHHHHHHHHHh
Q 042742 119 GGIHATGGGAYKFADLFKERLGVSLD---KEDEMDCLVAGANFLLK 161 (834)
Q Consensus 119 ~~i~~TGGGA~k~~~~~~~~lgi~~~---k~dEm~cli~G~~fLl~ 161 (834)
..|.+|||||.-+.+.+++.++.... -.|=..|.+.|+..++.
T Consensus 298 ~~IvL~GGga~ll~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNLIGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHHHGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 45999999998788888888874332 33556899999887654
No 88
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=29.54 E-value=59 Score=34.76 Aligned_cols=48 Identities=15% Similarity=-0.051 Sum_probs=35.5
Q ss_pred CCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 305 GLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 305 ~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
.++.|+++|+..+.+.+.- .++.. + ++.++.-..++.++-|+||++.+
T Consensus 343 ~i~~VvLvGG~s~~p~l~~-~l~~~---~--~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 343 DVDDIVLVGGSTRIPKVQQ-LLESY---F--DGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp GCCEEEEESGGGGSHHHHH-HHHHH---T--TTCCCBCCSCTTTHHHHHHHHHH
T ss_pred HCCEEEEECCccccHHHHH-HHHHH---c--CCCCCCCCcCHHHHHHHHHHHHH
Confidence 5688999999999886554 34332 2 24566667789999999999865
No 89
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=28.73 E-value=50 Score=35.13 Aligned_cols=37 Identities=32% Similarity=0.510 Sum_probs=31.1
Q ss_pred CceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEec
Q 042742 657 HKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVAN 694 (834)
Q Consensus 657 ~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK 694 (834)
.-||++++...+ --+.-++|++++|.++|++|++++-
T Consensus 15 ~MrIl~~~~~~~-gh~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 15 HMRILVIAGCSE-GFVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp CCEEEEECCSSH-HHHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEEcCCCc-chHHHHHHHHHHHHHCCCEEEEEcC
Confidence 348999988755 6677888999999999999999874
No 90
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=28.19 E-value=5.3e+02 Score=26.81 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=56.0
Q ss_pred ccEEEEEcCCceEEEEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCCCCCCCCCCCccccc-----
Q 042742 186 FPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDNRDHRHIGLSASTIA----- 260 (834)
Q Consensus 186 ~PyLlVNIGSGvSiikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~~dy~~~GL~~d~iA----- 260 (834)
.|.|+|..||-++|=.|+.+++ ++||.-+=| --+- ++-+.+-+.+ ||...+.
T Consensus 138 ~~~iVVD~GTAtT~D~V~~~G~--~lGG~I~PG-i~l~----------~~AL~~~TA~----------Lp~v~~~~~~~~ 194 (271)
T 2f9w_A 138 KACLVIDLGTAVTSDLVAADGV--HLGGYICPG-MTLM----------RSQLRTHTRR----------IRYDDAEARRAL 194 (271)
T ss_dssp SCEEEEEESSEEEEEEECTTSB--EEEEEEEEC-HHHH----------HHHHHHHSSS----------CCCCHHHHHHHT
T ss_pred CCEEEEEcCCceEEEEECCCCe--EEEEEECCC-HHHH----------HHHHHHhhhc----------CCCccccccccC
Confidence 4899999999999999987553 556654322 1111 2222222222 3222111
Q ss_pred --ccccccccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecccc
Q 042742 261 --SSFGKTISDKKELADYRPEDISLSLLRMISYNIGQISYLNALRFG-LKRIFFGGFFI 316 (834)
Q Consensus 261 --SsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIgqlA~l~A~~~~-i~~I~f~G~fi 316 (834)
..+|| -+.+-|-.+++..+.--|-.+.-...+.++ --+|++||+..
T Consensus 195 ~~~~iG~----------nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~~~~~vi~TGG~a 243 (271)
T 2f9w_A 195 ASLQPGQ----------ATAEAVERGCLLMLRGFVREQYAMACELLGPDCEIFLTGGDA 243 (271)
T ss_dssp TCCSCBS----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEESTTG
T ss_pred ccCCCCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCH
Confidence 11232 245667788887777777555544455555 45799988763
No 91
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=27.44 E-value=35 Score=36.84 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=29.4
Q ss_pred eEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEec
Q 042742 659 RALLFVDNSGADVVLGMLPLARELLRRGTEVVLVAN 694 (834)
Q Consensus 659 ~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK 694 (834)
||+++++-+. --|.-++|++++|.++|++|++++-
T Consensus 2 rIli~~~gt~-Ghv~p~~~La~~L~~~Gh~V~v~~~ 36 (404)
T 3h4t_A 2 GVLITGCGSR-GDTEPLVALAARLRELGADARMCLP 36 (404)
T ss_dssp CEEEEEESSH-HHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEeCCCC-ccHHHHHHHHHHHHHCCCeEEEEeC
Confidence 5788877766 5667888999999999999999874
No 92
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=27.20 E-value=49 Score=34.77 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=30.0
Q ss_pred CcEEEeCCccccchhHHHHHhCC---Cccc-chhhHHHHHHHHH
Q 042742 119 GGIHATGGGAYKFADLFKERLGV---SLDK-EDEMDCLVAGANF 158 (834)
Q Consensus 119 ~~i~~TGGGA~k~~~~~~~~lgi---~~~k-~dEm~cli~G~~f 158 (834)
..|.+|||||.-+.+.+++.++. ++.. .+=..|.+.|+..
T Consensus 274 ~~vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~ 317 (320)
T 2zgy_A 274 THVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL 317 (320)
T ss_dssp CEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHH
Confidence 45999999998788888888887 3333 3447788888753
No 93
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=27.10 E-value=8e+02 Score=28.59 Aligned_cols=206 Identities=11% Similarity=0.013 Sum_probs=119.3
Q ss_pred EEeCCc--cccchhHHHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCceEE
Q 042742 122 HATGGG--AYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSM 199 (834)
Q Consensus 122 ~~TGGG--A~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi 199 (834)
++|+-. .......+++.+|+++.... .+..+.|.--|.. ...-.|..++.||.|+.=
T Consensus 362 mVt~~~~~m~NI~~cVer~~gL~veV~g-~ep~AAglaaLTe--------------------DE~eLGvaiIDmGGGTTd 420 (610)
T 2d0o_A 362 MVKSDRLQMAMIAREIEQKLNIDVQIGG-AEAEAAILGALTT--------------------PGTTRPLAILDLGAGSTD 420 (610)
T ss_dssp EEECSCCCHHHHHHHHHHHHCCEEEEEE-EHHHHHHHHHTTS--------------------TTCCSSEEEEEECSSEEE
T ss_pred eeecCHHHHHHHHHHHHhccCCcceecc-ccHHHhhhhhcCC--------------------CCCcCCeEEEEeCCCcce
Confidence 445544 34555667777788544334 8888888887753 233478999999999996
Q ss_pred EEEcCCCceEEecccccCchhHHHHHHhhcCCCCHHHHHHHhcCCCC---C-----------CCCCCCCCcccccccccc
Q 042742 200 IKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQRGDN---R-----------DHRHIGLSASTIASSFGK 265 (834)
Q Consensus 200 ikV~~~~~f~RvgGtsiGGGTf~GL~~LLtg~~~fdeil~LA~~Gd~---~-----------dy~~~GL~~d~iASsFGK 265 (834)
+.|-.++...+..--+.||-.+--..+.-+|..|+++.-++=.-|.. . ..-.-++. ...|.+
T Consensus 421 ~sVf~~G~lv~a~~ip~gG~~VT~DIA~~Lgt~d~~~AErIK~YG~A~ve~lf~~~dede~Iev~~~~lg----p~~~~R 496 (610)
T 2d0o_A 421 ASIINPKGDIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFSTPLP----PAVFAR 496 (610)
T ss_dssp EEEECTTCCEEEEEEECSHHHHHHHHHHHHTCCCHHHHHHHHHSCEEEECSSSEEEETTSCEEECSSCCC----GGGTTC
T ss_pred EEEEcCCcEEEEEEeccchHHHHHHHHHHhCCCCHHHHHHhcccCceeecccccccCCCCeEEEecCCCC----cceeee
Confidence 66666677888888889998888888888898888776555333322 0 11001122 566777
Q ss_pred cc-cccccccCCChhH--HHHHHHHHHHHH----------HHHHHHHH--HHHcCCCEEEEecccccCcchhHHHHHHHH
Q 042742 266 TI-SDKKELADYRPED--ISLSLLRMISYN----------IGQISYLN--ALRFGLKRIFFGGFFIRGHAYTMDTISFAV 330 (834)
Q Consensus 266 ~~-~~~~~~~~~~~eD--ia~SLl~mI~~n----------IgqlA~l~--A~~~~i~~I~f~G~fi~~~~~~m~~ls~ai 330 (834)
+. .++..+... +.+ +-. +.+|-.. +-++.+-. ...-.+.+|+.+|+-..-..+.. + |-
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE--lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~E-l---A~ 569 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK--VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQ-L---VT 569 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHH-H---HH
T ss_pred eecccccceeee-CCCcchHH--HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHH-H---HH
Confidence 22 111111122 222 333 4455444 33332210 00112377999886655444332 2 33
Q ss_pred hhccCCCceEe-----eccCCchhhHHHHHhccc
Q 042742 331 QFWSKGEAQAM-----FLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 331 ~fws~g~~~a~-----Fl~h~gy~GAlGA~L~~~ 359 (834)
+.+++..+++= =.+.+.|+.|+|-.+.+.
T Consensus 570 ~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 570 DALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp HHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred HHhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 33344233221 157899999999998764
No 94
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=25.63 E-value=1.9e+02 Score=28.52 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=27.1
Q ss_pred ceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEecCc
Q 042742 658 KRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSL 696 (834)
Q Consensus 658 k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK~~ 696 (834)
|++++..-+.| ++.- +++.|++.|.+|+++.+..
T Consensus 3 k~vlVTGas~g----iG~~-~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 3 RKALVTGGSRG----IGRA-IAEALVARGYRVAIASRNP 36 (239)
T ss_dssp CEEEEETTTSH----HHHH-HHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH----HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 45666666655 5887 9999999999999998864
No 95
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=25.14 E-value=56 Score=34.36 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=29.4
Q ss_pred ceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEec
Q 042742 658 KRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVAN 694 (834)
Q Consensus 658 k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK 694 (834)
.+|++++--+. .-+.=+++++++|.++|++|++++-
T Consensus 5 ~~il~~~~~~~-Ghv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 5 RHILFANVQGH-GHVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEeCCCC-cccccHHHHHHHHHhCCCEEEEEcC
Confidence 47888886543 5667888999999999999999873
No 96
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=24.29 E-value=64 Score=34.03 Aligned_cols=36 Identities=31% Similarity=0.375 Sum_probs=29.1
Q ss_pred ceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEec
Q 042742 658 KRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVAN 694 (834)
Q Consensus 658 k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK 694 (834)
=|||+++=-+. .=+.=+++||+.|.++|++|+++.-
T Consensus 23 MRIL~~~~p~~-GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 23 MRALFITSPGL-SHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp CEEEEECCSSH-HHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCch-hHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 48888765433 5678888999999999999999863
No 97
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.53 E-value=32 Score=35.22 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=27.0
Q ss_pred CceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEecCc
Q 042742 657 HKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSL 696 (834)
Q Consensus 657 ~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK~~ 696 (834)
.+++++..-+.| ++.- +++.|+++|.+|+++.+..
T Consensus 28 ~k~vlITGasgg----IG~~-la~~l~~~G~~V~~~~r~~ 62 (286)
T 1xu9_A 28 GKKVIVTGASKG----IGRE-MAYHLAKMGAHVVVTARSK 62 (286)
T ss_dssp TCEEEESSCSSH----HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCCCcH----HHHH-HHHHHHHCCCEEEEEECCH
Confidence 355665555555 5888 9999999999999998864
No 98
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=23.06 E-value=73 Score=34.04 Aligned_cols=49 Identities=10% Similarity=-0.082 Sum_probs=35.8
Q ss_pred cCCCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhccc
Q 042742 304 FGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYE 359 (834)
Q Consensus 304 ~~i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~~ 359 (834)
..++.|+++|+..+.+.+.. .+...+ +.++....++.++-|+||++.+.
T Consensus 332 ~~i~~IvL~GG~s~~p~l~~-~l~~~~------~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 332 SDIDDVILVGGQTRMPMVQK-KVAEFF------GKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp TTCCEEEEESGGGGSHHHHH-HHHHHH------SSCCBCSSCTTTHHHHHHHHHTT
T ss_pred hhCCEEEEecCccccHHHHH-HHHHHh------CCCCCCCcChHHHHHHHHHHHHH
Confidence 34688999999988886654 344333 23566678899999999998753
No 99
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=21.47 E-value=1.5e+02 Score=29.91 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=28.7
Q ss_pred CceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEecCcc
Q 042742 657 HKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSLP 697 (834)
Q Consensus 657 ~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK~~P 697 (834)
.|++++..-+.| ++.- +++.|++.|.+|+++.+..+
T Consensus 21 ~k~vlVTGas~g----IG~a-ia~~l~~~G~~V~~~~r~~~ 56 (253)
T 2nm0_A 21 SRSVLVTGGNRG----IGLA-IARAFADAGDKVAITYRSGE 56 (253)
T ss_dssp CCEEEEETTTSH----HHHH-HHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEeCCCCH----HHHH-HHHHHHHCCCEEEEEeCChH
Confidence 356666666666 5887 99999999999999998754
No 100
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.56 E-value=1.5e+02 Score=29.45 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=25.1
Q ss_pred CCceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEe
Q 042742 656 PHKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVA 693 (834)
Q Consensus 656 ~~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~v 693 (834)
+.|++++..-+.| ++.- +++.|+++|.+|+++.
T Consensus 12 ~~k~vlITGas~g----iG~~-ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 12 SQRIAYVTGGMGG----IGTS-ICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -CEEEEETTTTSH----HHHH-HHHHHHHTTEEEEEEE
T ss_pred CCCEEEEECCCCh----HHHH-HHHHHHHCCCEEEEEe
Confidence 3456666555555 5887 9999999999999887
No 101
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=20.42 E-value=99 Score=32.69 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=30.9
Q ss_pred CceEEEEecCCCchhhhchHHHHHHHHhCCCEEEEEecC
Q 042742 657 HKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANS 695 (834)
Q Consensus 657 ~k~vl~~~DNAG~EIV~DllpLa~eLl~~G~kVil~vK~ 695 (834)
.-||++++-..+ --+.-+++++++|.++|++|+++...
T Consensus 20 ~MrIl~~~~~~~-Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 20 HMRVLFASLGTH-GHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp SCEEEEECCSSH-HHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred eeEEEEEcCCCc-ccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 348999986665 56667778999999999999999753
No 102
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=20.36 E-value=1.8e+02 Score=30.76 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=29.1
Q ss_pred CCEEEEecccccCcchhHHHHHHHHhhccCCCceEeeccCCchhhHHHHHhcc
Q 042742 306 LKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSY 358 (834)
Q Consensus 306 i~~I~f~G~fi~~~~~~m~~ls~ai~fws~g~~~a~Fl~h~gy~GAlGA~L~~ 358 (834)
++.|+++|+-..- .-..++... ..++...+++.|+-|+|+...+
T Consensus 279 ~~~IvltGGGA~l---~~~~l~~~~------~~~v~v~~~P~~a~a~G~~~~~ 322 (329)
T 4apw_A 279 LDSLIFIGGTTQK---LKEQISKTY------PNNSIITNNSQWTTCEGLYKVA 322 (329)
T ss_dssp CSEEEEESTTHHH---HHHHHHHHS------TTCEECCSSGGGHHHHHHHHHH
T ss_pred ccEEEEECChHHH---HHHHHHHHc------CCCCEecCCChhhHHHHHHHHH
Confidence 5689997754322 123343322 3467889999999999998754
No 103
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=20.28 E-value=69 Score=36.67 Aligned_cols=48 Identities=17% Similarity=0.311 Sum_probs=32.9
Q ss_pred hcccccCcEEEeCCcc--ccchhHHHHHhCCCcccchhhHHHHHHHHHHH
Q 042742 113 SKQLHRGGIHATGGGA--YKFADLFKERLGVSLDKEDEMDCLVAGANFLL 160 (834)
Q Consensus 113 ~~~~~~~~i~~TGGGA--~k~~~~~~~~lgi~~~k~dEm~cli~G~~fLl 160 (834)
+.+.....|.++|||| --+.+++.+.+|++|...+.-++-..|+-+|.
T Consensus 438 ~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA 487 (554)
T 3l0q_A 438 QNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMG 487 (554)
T ss_dssp TTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHH
T ss_pred HcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHH
Confidence 3344445699999995 33445567789999887665566677777665
No 104
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=20.07 E-value=46 Score=33.87 Aligned_cols=39 Identities=13% Similarity=0.225 Sum_probs=28.2
Q ss_pred HHHHhCCCcccchhhHHHHHHHHHHHhcccccceEeecCceeeeecCCCCCccEEEEEcCCceEE
Q 042742 135 FKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSM 199 (834)
Q Consensus 135 ~~~~lgi~~~k~dEm~cli~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi 199 (834)
+++.+++++.-.+...|...|-... -.++.+.+|+|+-.
T Consensus 87 l~~~~~~pv~v~NDanaaalge~~~--------------------------~~~~~l~~GtGiG~ 125 (226)
T 3lm2_A 87 YEGAFGRPVRIVNDALMQAIGSYNG--------------------------GRMLFLGLGTGLGA 125 (226)
T ss_dssp HHHHHTSCEEEEEHHHHHHHHHCCS--------------------------SEEEEEEESSSEEE
T ss_pred hHHhcCCeEEEEEHHHHHHHHHhhc--------------------------CcEEEEEeCCceEE
Confidence 4677888888888888887763211 13788889998863
Done!