Query 042745
Match_columns 331
No_of_seqs 173 out of 1829
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 08:59:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042745.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042745hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 1.9E-42 4.2E-47 303.5 31.6 297 15-328 30-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 2.8E-37 6.1E-42 275.2 25.1 258 45-330 55-317 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 7.6E-34 1.6E-38 253.4 26.1 245 60-328 61-310 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 7.2E-33 1.5E-37 233.5 14.1 202 85-305 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 2.3E-26 4.9E-31 221.8 22.5 244 43-330 361-618 (620)
6 PF00326 Peptidase_S9: Prolyl 99.9 1.6E-23 3.4E-28 176.7 11.7 190 107-330 6-211 (213)
7 PLN02298 hydrolase, alpha/beta 99.9 8E-22 1.7E-26 177.5 22.8 248 43-330 28-319 (330)
8 PRK13604 luxD acyl transferase 99.9 2E-21 4.3E-26 168.2 20.3 204 58-305 17-246 (307)
9 PLN02385 hydrolase; alpha/beta 99.9 4.7E-21 1E-25 173.7 22.0 236 59-330 70-347 (349)
10 PRK10566 esterase; Provisional 99.9 1.2E-20 2.6E-25 163.0 22.7 217 62-329 11-249 (249)
11 PRK10115 protease 2; Provision 99.9 4.7E-21 1E-25 186.2 22.0 243 44-328 413-675 (686)
12 KOG1455 Lysophospholipase [Lip 99.9 8.4E-21 1.8E-25 160.1 18.9 232 60-328 37-312 (313)
13 PHA02857 monoglyceride lipase; 99.9 2.1E-20 4.6E-25 163.9 21.2 231 59-330 9-275 (276)
14 TIGR02821 fghA_ester_D S-formy 99.9 4.7E-20 1E-24 161.5 23.2 234 46-328 12-274 (275)
15 PLN02442 S-formylglutathione h 99.9 6.1E-20 1.3E-24 161.2 19.5 234 48-330 19-282 (283)
16 COG0412 Dienelactone hydrolase 99.9 2.6E-19 5.6E-24 152.1 22.5 207 48-331 3-236 (236)
17 KOG4627 Kynurenine formamidase 99.9 2.7E-21 5.8E-26 153.1 9.3 203 44-303 42-247 (270)
18 PF01738 DLH: Dienelactone hyd 99.8 3.6E-20 7.8E-25 156.8 15.9 195 63-329 1-218 (218)
19 PRK05077 frsA fermentation/res 99.8 1.9E-19 4.1E-24 165.6 21.7 237 46-329 167-413 (414)
20 PRK10749 lysophospholipase L2; 99.8 1.4E-19 3.1E-24 162.7 19.6 232 60-328 40-329 (330)
21 PF10340 DUF2424: Protein of u 99.8 5.5E-19 1.2E-23 156.0 21.8 220 63-305 106-351 (374)
22 PLN02652 hydrolase; alpha/beta 99.8 7E-19 1.5E-23 160.7 23.1 230 60-329 120-388 (395)
23 KOG1552 Predicted alpha/beta h 99.8 8.6E-19 1.9E-23 145.2 17.5 203 60-329 45-253 (258)
24 TIGR03100 hydr1_PEP hydrolase, 99.8 3.2E-18 6.9E-23 149.8 17.8 237 48-327 3-274 (274)
25 KOG4391 Predicted alpha/beta h 99.8 1.6E-18 3.5E-23 138.6 13.9 228 43-329 50-283 (300)
26 COG2272 PnbA Carboxylesterase 99.8 1.1E-18 2.5E-23 156.7 13.0 179 10-207 4-218 (491)
27 PLN00021 chlorophyllase 99.8 4.3E-17 9.4E-22 144.1 22.7 219 60-329 36-284 (313)
28 KOG4388 Hormone-sensitive lipa 99.8 3.1E-18 6.8E-23 154.4 15.2 113 80-204 394-506 (880)
29 COG1647 Esterase/lipase [Gener 99.8 1.2E-18 2.5E-23 140.3 11.0 207 82-327 15-243 (243)
30 PRK00870 haloalkane dehalogena 99.8 4.4E-17 9.5E-22 144.8 22.3 239 45-328 19-301 (302)
31 KOG2100 Dipeptidyl aminopeptid 99.8 1.3E-17 2.7E-22 162.9 19.9 239 44-329 497-748 (755)
32 COG2267 PldB Lysophospholipase 99.8 1.2E-17 2.6E-22 147.0 17.6 237 59-330 18-296 (298)
33 PRK11460 putative hydrolase; P 99.8 2.5E-17 5.4E-22 140.4 17.3 108 162-329 100-209 (232)
34 PLN02824 hydrolase, alpha/beta 99.8 9.6E-17 2.1E-21 142.1 21.3 210 82-328 29-294 (294)
35 TIGR01840 esterase_phb esteras 99.8 1E-17 2.2E-22 141.1 14.3 180 66-286 2-197 (212)
36 PF12695 Abhydrolase_5: Alpha/ 99.7 4.6E-17 1E-21 128.4 14.8 143 84-303 1-145 (145)
37 KOG2281 Dipeptidyl aminopeptid 99.7 6E-17 1.3E-21 147.8 15.6 228 60-328 623-867 (867)
38 PF05448 AXE1: Acetyl xylan es 99.7 1.3E-17 2.9E-22 147.6 10.2 237 42-328 51-320 (320)
39 PLN02511 hydrolase 99.7 5.4E-16 1.2E-20 142.1 21.0 125 58-207 79-211 (388)
40 TIGR03343 biphenyl_bphD 2-hydr 99.7 4.1E-16 8.8E-21 137.1 19.0 209 82-326 30-281 (282)
41 cd00312 Esterase_lipase Estera 99.7 7.8E-17 1.7E-21 152.8 15.5 177 12-207 3-214 (493)
42 PF02230 Abhydrolase_2: Phosph 99.7 3.2E-16 6.9E-21 132.3 17.1 112 162-328 102-215 (216)
43 PRK10985 putative hydrolase; P 99.7 4.3E-16 9.3E-21 139.7 18.4 237 60-329 41-321 (324)
44 TIGR01250 pro_imino_pep_2 prol 99.7 6.5E-16 1.4E-20 135.3 19.1 102 81-206 24-131 (288)
45 PRK10673 acyl-CoA esterase; Pr 99.7 2.2E-15 4.8E-20 130.3 21.7 208 80-328 14-255 (255)
46 TIGR01607 PST-A Plasmodium sub 99.7 1.2E-15 2.7E-20 136.9 19.8 251 58-326 5-331 (332)
47 TIGR03611 RutD pyrimidine util 99.7 8.3E-16 1.8E-20 132.5 17.8 210 80-327 11-257 (257)
48 TIGR03695 menH_SHCHC 2-succiny 99.7 9.8E-16 2.1E-20 130.9 17.8 208 82-326 1-251 (251)
49 TIGR03056 bchO_mg_che_rel puta 99.7 1.9E-15 4.2E-20 132.2 19.5 207 81-326 27-278 (278)
50 COG0400 Predicted esterase [Ge 99.7 5.6E-16 1.2E-20 127.7 14.9 176 80-329 16-206 (207)
51 TIGR02240 PHA_depoly_arom poly 99.7 1.3E-15 2.9E-20 133.5 18.0 208 82-328 25-266 (276)
52 PF00135 COesterase: Carboxyle 99.7 1.1E-16 2.5E-21 153.3 11.2 130 60-206 106-245 (535)
53 TIGR01836 PHA_synth_III_C poly 99.7 7.3E-15 1.6E-19 133.2 22.2 130 45-208 36-173 (350)
54 PLN02894 hydrolase, alpha/beta 99.7 8.4E-15 1.8E-19 134.8 22.0 100 80-206 103-211 (402)
55 TIGR02427 protocat_pcaD 3-oxoa 99.7 1.3E-15 2.9E-20 130.3 15.4 209 81-326 12-251 (251)
56 PRK06489 hypothetical protein; 99.7 2.8E-15 6.2E-20 136.4 18.1 251 43-330 32-359 (360)
57 PLN02965 Probable pheophorbida 99.7 1.2E-14 2.7E-19 125.9 20.8 209 84-327 5-252 (255)
58 PLN02679 hydrolase, alpha/beta 99.7 5.5E-15 1.2E-19 134.4 19.3 213 81-329 87-358 (360)
59 PRK03592 haloalkane dehalogena 99.7 5.1E-15 1.1E-19 131.1 16.6 211 82-329 27-290 (295)
60 PRK11071 esterase YqiA; Provis 99.6 1.9E-14 4E-19 118.8 18.2 177 83-326 2-189 (190)
61 COG2945 Predicted hydrolase of 99.6 3.1E-14 6.8E-19 112.5 17.5 175 80-326 26-205 (210)
62 PRK11126 2-succinyl-6-hydroxy- 99.6 8.4E-15 1.8E-19 125.7 15.6 205 82-327 2-241 (242)
63 PRK10349 carboxylesterase BioH 99.6 6.1E-15 1.3E-19 127.9 14.8 207 83-327 14-255 (256)
64 TIGR01738 bioH putative pimelo 99.6 1.5E-14 3.2E-19 123.4 16.9 206 82-325 4-245 (245)
65 TIGR03101 hydr2_PEP hydrolase, 99.6 7.2E-14 1.6E-18 120.5 20.9 222 60-324 9-264 (266)
66 PRK14875 acetoin dehydrogenase 99.6 6.6E-15 1.4E-19 134.6 15.5 210 80-328 129-371 (371)
67 TIGR01392 homoserO_Ac_trn homo 99.6 1.5E-14 3.2E-19 131.3 16.4 133 48-206 3-162 (351)
68 PLN03087 BODYGUARD 1 domain co 99.6 3.1E-14 6.7E-19 132.2 18.8 117 60-206 185-309 (481)
69 PRK07581 hypothetical protein; 99.6 2.9E-14 6.3E-19 128.8 18.1 129 46-205 11-158 (339)
70 PRK03204 haloalkane dehalogena 99.6 2.9E-14 6.4E-19 125.6 17.6 99 82-206 34-136 (286)
71 PF12740 Chlorophyllase2: Chlo 99.6 9.3E-14 2E-18 117.3 19.5 130 62-207 3-132 (259)
72 KOG1838 Alpha/beta hydrolase [ 99.6 1.6E-13 3.5E-18 122.0 20.5 249 45-327 93-387 (409)
73 PF08840 BAAT_C: BAAT / Acyl-C 99.6 6.2E-15 1.3E-19 123.7 11.0 176 135-331 3-213 (213)
74 PF12697 Abhydrolase_6: Alpha/ 99.6 8.8E-15 1.9E-19 123.1 11.9 188 85-305 1-218 (228)
75 COG3458 Acetyl esterase (deace 99.6 1.1E-14 2.4E-19 120.8 11.1 224 41-305 50-302 (321)
76 PLN02578 hydrolase 99.6 1.4E-13 3.1E-18 125.0 19.6 97 82-205 86-186 (354)
77 TIGR00976 /NonD putative hydro 99.6 1.2E-13 2.7E-18 132.3 18.3 126 57-208 3-134 (550)
78 PLN03084 alpha/beta hydrolase 99.6 3.2E-13 6.8E-18 122.9 20.0 100 81-206 126-232 (383)
79 KOG4178 Soluble epoxide hydrol 99.6 1.2E-12 2.6E-17 112.7 22.2 100 80-204 42-146 (322)
80 KOG4409 Predicted hydrolase/ac 99.6 7.8E-14 1.7E-18 120.4 14.7 112 80-210 88-199 (365)
81 PRK00175 metX homoserine O-ace 99.6 4E-13 8.8E-18 123.0 19.5 69 253-329 304-375 (379)
82 COG4099 Predicted peptidase [G 99.6 2E-14 4.4E-19 120.5 9.9 174 60-298 171-354 (387)
83 COG0429 Predicted hydrolase of 99.6 2.6E-13 5.7E-18 116.5 16.6 232 60-328 59-340 (345)
84 PF10503 Esterase_phd: Esteras 99.5 1.5E-13 3.3E-18 114.6 14.0 120 64-207 2-133 (220)
85 PF06500 DUF1100: Alpha/beta h 99.5 2E-14 4.2E-19 128.7 8.4 234 46-329 164-410 (411)
86 PLN02211 methyl indole-3-aceta 99.5 1.7E-12 3.6E-17 113.6 20.1 102 80-206 16-122 (273)
87 PLN02872 triacylglycerol lipas 99.5 2.4E-13 5.2E-18 124.0 15.2 140 43-205 40-196 (395)
88 KOG3043 Predicted hydrolase re 99.5 3.8E-13 8.2E-18 108.9 14.0 162 104-330 57-242 (242)
89 PF12715 Abhydrolase_7: Abhydr 99.5 1.5E-14 3.3E-19 127.2 6.4 216 43-300 84-344 (390)
90 TIGR01249 pro_imino_pep_1 prol 99.5 1.1E-12 2.4E-17 116.8 17.9 99 82-206 27-130 (306)
91 PLN02980 2-oxoglutarate decarb 99.5 1.3E-12 2.8E-17 138.3 19.8 216 81-328 1370-1639(1655)
92 KOG4667 Predicted esterase [Li 99.5 1.2E-12 2.7E-17 105.1 14.8 193 80-307 31-243 (269)
93 KOG2564 Predicted acetyltransf 99.5 1.2E-12 2.6E-17 109.2 14.4 121 47-202 50-178 (343)
94 PRK10439 enterobactin/ferric e 99.5 4.6E-12 9.9E-17 116.2 19.8 218 47-326 180-407 (411)
95 KOG2984 Predicted hydrolase [G 99.5 8.1E-14 1.8E-18 110.7 6.4 206 83-328 43-276 (277)
96 KOG1454 Predicted hydrolase/ac 99.5 2.6E-12 5.5E-17 114.5 16.8 216 80-329 56-325 (326)
97 KOG3101 Esterase D [General fu 99.5 4.6E-13 1E-17 107.1 9.6 221 60-309 25-267 (283)
98 PRK05371 x-prolyl-dipeptidyl a 99.5 1.1E-11 2.4E-16 121.9 21.2 204 107-330 272-521 (767)
99 PRK08775 homoserine O-acetyltr 99.4 3.3E-12 7.1E-17 115.6 16.1 65 253-328 272-339 (343)
100 PF02129 Peptidase_S15: X-Pro 99.4 1.7E-12 3.7E-17 113.5 11.8 218 59-303 1-271 (272)
101 COG1505 Serine proteases of th 99.4 6.7E-12 1.4E-16 115.1 15.7 239 44-329 391-647 (648)
102 KOG2382 Predicted alpha/beta h 99.4 3.8E-11 8.2E-16 103.6 18.1 216 79-329 49-314 (315)
103 PF07224 Chlorophyllase: Chlor 99.4 1.7E-11 3.6E-16 101.7 15.3 129 61-208 31-159 (307)
104 COG3509 LpqC Poly(3-hydroxybut 99.4 4.4E-11 9.4E-16 101.2 16.4 133 48-206 36-179 (312)
105 COG1770 PtrB Protease II [Amin 99.4 8.5E-11 1.8E-15 109.2 19.1 244 19-303 392-656 (682)
106 PF05728 UPF0227: Uncharacteri 99.3 2.1E-11 4.5E-16 99.5 12.7 183 85-326 2-187 (187)
107 KOG1516 Carboxylesterase and r 99.3 1.3E-11 2.8E-16 118.6 13.5 129 59-205 93-231 (545)
108 TIGR01838 PHA_synth_I poly(R)- 99.3 3.2E-10 6.9E-15 106.7 22.2 131 47-210 164-306 (532)
109 KOG2112 Lysophospholipase [Lip 99.3 5.7E-11 1.2E-15 95.8 14.7 130 136-327 72-203 (206)
110 PF00756 Esterase: Putative es 99.3 5E-12 1.1E-16 109.3 9.4 199 60-307 5-240 (251)
111 PF08538 DUF1749: Protein of u 99.3 5.6E-11 1.2E-15 102.4 14.2 230 81-326 32-303 (303)
112 PF03403 PAF-AH_p_II: Platelet 99.3 2.1E-11 4.6E-16 110.7 12.2 193 80-330 98-360 (379)
113 PRK05855 short chain dehydroge 99.3 5E-11 1.1E-15 115.5 14.0 86 81-186 24-115 (582)
114 KOG2237 Predicted serine prote 99.3 1.4E-10 3.1E-15 107.0 15.5 246 44-328 438-705 (712)
115 PRK06765 homoserine O-acetyltr 99.3 1.4E-10 3.1E-15 105.9 15.2 68 253-328 318-388 (389)
116 KOG4389 Acetylcholinesterase/B 99.2 5.4E-11 1.2E-15 106.6 10.9 130 59-207 117-256 (601)
117 PRK07868 acyl-CoA synthetase; 99.2 7.7E-10 1.7E-14 113.2 20.7 128 48-207 40-178 (994)
118 COG3571 Predicted hydrolase of 99.2 1.3E-09 2.9E-14 83.7 16.6 183 81-327 13-210 (213)
119 KOG3847 Phospholipase A2 (plat 99.2 3.1E-10 6.8E-15 96.3 12.3 194 79-329 115-372 (399)
120 cd00707 Pancreat_lipase_like P 99.2 2.3E-10 5E-15 99.9 10.8 107 80-206 34-147 (275)
121 COG3208 GrsT Predicted thioest 99.1 4E-09 8.7E-14 87.5 15.1 208 81-326 7-234 (244)
122 COG0627 Predicted esterase [Ge 99.1 4.6E-10 1E-14 98.7 10.2 239 65-329 37-312 (316)
123 PF03583 LIP: Secretory lipase 99.1 3.6E-09 7.8E-14 93.0 15.5 205 104-329 16-282 (290)
124 COG4188 Predicted dienelactone 99.1 4.8E-10 1E-14 98.4 9.5 127 47-185 38-179 (365)
125 COG2382 Fes Enterochelin ester 99.1 3.9E-09 8.5E-14 90.1 14.1 213 42-308 64-285 (299)
126 COG2936 Predicted acyl esteras 99.1 5.9E-09 1.3E-13 97.0 16.1 135 45-207 17-160 (563)
127 PF06821 Ser_hydrolase: Serine 99.1 7.2E-09 1.6E-13 83.6 14.1 151 85-303 1-153 (171)
128 TIGR03230 lipo_lipase lipoprot 99.0 5.2E-09 1.1E-13 95.9 12.5 106 80-205 39-153 (442)
129 COG0596 MhpC Predicted hydrola 99.0 1.3E-07 2.9E-12 80.5 20.1 100 82-206 21-123 (282)
130 PF06057 VirJ: Bacterial virul 99.0 5.3E-09 1.2E-13 83.9 9.8 185 84-327 4-191 (192)
131 PF00561 Abhydrolase_1: alpha/ 99.0 3.2E-09 7E-14 89.8 8.8 71 116-205 1-78 (230)
132 TIGR01839 PHA_synth_II poly(R) 98.9 4.4E-07 9.5E-12 85.1 20.7 131 46-209 190-331 (560)
133 PRK04940 hypothetical protein; 98.8 2E-07 4.4E-12 74.7 14.2 119 165-327 60-179 (180)
134 PF03959 FSH1: Serine hydrolas 98.8 1.8E-08 3.9E-13 84.7 6.9 117 135-305 83-203 (212)
135 PF06342 DUF1057: Alpha/beta h 98.7 4.7E-07 1E-11 76.9 14.4 127 48-206 7-137 (297)
136 PF06028 DUF915: Alpha/beta hy 98.7 6.2E-07 1.3E-11 76.8 14.6 150 134-326 85-253 (255)
137 PF02273 Acyl_transf_2: Acyl t 98.7 2.1E-07 4.5E-12 77.0 10.9 200 60-305 12-239 (294)
138 TIGR03502 lipase_Pla1_cef extr 98.7 1.1E-07 2.4E-12 92.7 10.7 99 81-187 448-577 (792)
139 COG4757 Predicted alpha/beta h 98.7 2.7E-07 5.9E-12 75.6 11.2 228 58-325 13-280 (281)
140 PF09752 DUF2048: Uncharacteri 98.7 5.2E-06 1.1E-10 73.1 19.5 105 62-188 76-198 (348)
141 COG4814 Uncharacterized protei 98.7 1.3E-06 2.7E-11 72.7 14.7 199 84-327 47-286 (288)
142 PF05677 DUF818: Chlamydia CHL 98.6 8.8E-06 1.9E-10 71.0 18.8 97 80-186 135-236 (365)
143 KOG2624 Triglyceride lipase-ch 98.6 2.4E-06 5.2E-11 77.6 15.6 134 43-207 44-200 (403)
144 TIGR01849 PHB_depoly_PhaZ poly 98.5 9.1E-06 2E-10 74.0 17.7 127 60-210 83-212 (406)
145 PF10230 DUF2305: Uncharacteri 98.5 3.4E-06 7.4E-11 73.3 14.3 111 82-208 2-124 (266)
146 COG2819 Predicted hydrolase of 98.5 2.5E-05 5.4E-10 66.2 18.1 43 162-210 134-176 (264)
147 PF00151 Lipase: Lipase; Inte 98.5 4.1E-07 8.8E-12 81.2 7.4 110 79-206 68-187 (331)
148 PF07819 PGAP1: PGAP1-like pro 98.4 1.9E-06 4.2E-11 72.8 10.2 107 81-203 3-120 (225)
149 PF12048 DUF3530: Protein of u 98.4 2.7E-05 5.8E-10 69.1 17.7 200 60-328 70-309 (310)
150 PF00975 Thioesterase: Thioest 98.4 2.3E-06 4.9E-11 72.7 10.3 101 83-205 1-103 (229)
151 KOG4840 Predicted hydrolases o 98.3 6.5E-05 1.4E-09 61.4 15.2 128 62-209 15-147 (299)
152 COG3243 PhaC Poly(3-hydroxyalk 98.3 4.1E-05 8.9E-10 68.7 15.2 118 62-206 92-217 (445)
153 PF12146 Hydrolase_4: Putative 98.3 2.8E-06 6E-11 59.1 6.0 58 60-130 1-58 (79)
154 COG2021 MET2 Homoserine acetyl 98.3 0.00017 3.6E-09 63.9 18.3 63 254-327 302-367 (368)
155 COG3545 Predicted esterase of 98.2 9.8E-05 2.1E-09 58.4 14.9 97 164-303 58-156 (181)
156 KOG3253 Predicted alpha/beta h 98.2 4E-05 8.8E-10 71.2 14.1 192 80-328 174-378 (784)
157 PF11144 DUF2920: Protein of u 98.2 0.0003 6.5E-09 63.4 18.8 146 135-297 163-331 (403)
158 COG3150 Predicted esterase [Ge 98.1 2.7E-05 5.8E-10 60.8 9.6 122 165-327 59-188 (191)
159 PF10142 PhoPQ_related: PhoPQ- 98.1 0.0004 8.6E-09 62.5 18.2 215 62-327 49-319 (367)
160 KOG3975 Uncharacterized conser 98.1 0.00083 1.8E-08 56.1 18.4 121 60-204 10-145 (301)
161 COG1073 Hydrolases of the alph 98.1 2.1E-05 4.6E-10 69.0 9.6 63 261-329 234-298 (299)
162 COG4947 Uncharacterized protei 98.1 4.4E-06 9.6E-11 65.2 4.4 185 81-305 26-217 (227)
163 KOG2551 Phospholipase/carboxyh 98.1 3E-05 6.5E-10 63.5 9.1 127 139-327 89-219 (230)
164 KOG1553 Predicted alpha/beta h 98.0 3.7E-05 8.1E-10 66.8 9.4 119 60-207 224-346 (517)
165 KOG2931 Differentiation-relate 97.8 0.0045 9.7E-08 53.2 18.4 221 60-327 31-305 (326)
166 PF05990 DUF900: Alpha/beta hy 97.8 0.00013 2.8E-09 62.1 9.2 115 80-208 16-139 (233)
167 PF03096 Ndr: Ndr family; Int 97.8 0.00023 5.1E-09 61.3 10.7 217 60-327 8-278 (283)
168 PF01674 Lipase_2: Lipase (cla 97.8 4.8E-05 1E-09 63.7 6.2 84 84-186 3-96 (219)
169 PF11339 DUF3141: Protein of u 97.8 0.014 3.1E-07 54.1 21.9 108 63-188 52-163 (581)
170 PF05577 Peptidase_S28: Serine 97.7 0.00012 2.7E-09 68.4 8.6 124 60-206 11-148 (434)
171 PTZ00472 serine carboxypeptida 97.7 0.00099 2.2E-08 62.6 13.7 66 134-209 150-219 (462)
172 PF07519 Tannase: Tannase and 97.7 0.0044 9.5E-08 58.4 17.6 68 261-331 355-430 (474)
173 KOG3967 Uncharacterized conser 97.7 0.001 2.2E-08 54.2 11.4 106 79-202 98-223 (297)
174 COG3319 Thioesterase domains o 97.6 0.00051 1.1E-08 58.9 10.0 102 83-207 1-104 (257)
175 PF05705 DUF829: Eukaryotic pr 97.6 0.0016 3.5E-08 55.8 13.1 59 261-325 180-240 (240)
176 PLN02733 phosphatidylcholine-s 97.5 0.00027 6E-09 65.5 7.4 90 103-209 110-204 (440)
177 COG4782 Uncharacterized protei 97.5 0.00046 1E-08 60.9 8.3 111 80-208 114-236 (377)
178 PF05057 DUF676: Putative seri 97.5 0.00041 8.9E-09 58.4 7.3 94 81-187 3-100 (217)
179 PF07082 DUF1350: Protein of u 97.2 0.0054 1.2E-07 51.7 10.4 89 84-187 18-112 (250)
180 PF00450 Peptidase_S10: Serine 97.1 0.004 8.7E-08 57.8 10.0 67 135-208 113-183 (415)
181 PF02450 LCAT: Lecithin:choles 97.0 0.0026 5.6E-08 58.6 7.6 90 103-208 67-162 (389)
182 PF03283 PAE: Pectinacetyleste 97.0 0.0079 1.7E-07 54.5 10.4 41 135-186 137-177 (361)
183 PLN02606 palmitoyl-protein thi 96.9 0.072 1.6E-06 46.6 15.4 39 165-207 95-133 (306)
184 COG1075 LipA Predicted acetylt 96.9 0.0033 7.2E-08 56.6 7.4 104 83-208 60-166 (336)
185 PRK10252 entF enterobactin syn 96.9 0.007 1.5E-07 64.6 10.9 101 82-205 1068-1170(1296)
186 KOG3724 Negative regulator of 96.8 0.0047 1E-07 59.7 7.7 54 130-187 151-204 (973)
187 cd00741 Lipase Lipase. Lipase 96.6 0.0084 1.8E-07 47.4 7.2 42 163-206 26-67 (153)
188 PF11187 DUF2974: Protein of u 96.6 0.0043 9.2E-08 52.4 5.7 52 139-203 69-120 (224)
189 COG3946 VirJ Type IV secretory 96.6 0.089 1.9E-06 47.4 13.9 79 84-182 263-343 (456)
190 PF01764 Lipase_3: Lipase (cla 96.5 0.011 2.5E-07 45.7 7.0 26 164-189 63-88 (140)
191 KOG2183 Prolylcarboxypeptidase 96.5 0.0095 2.1E-07 53.6 7.1 92 105-213 101-210 (492)
192 TIGR03712 acc_sec_asp2 accesso 96.5 0.37 8E-06 44.7 17.2 104 81-210 288-394 (511)
193 PF11288 DUF3089: Protein of u 96.4 0.0098 2.1E-07 49.1 6.1 60 115-186 45-116 (207)
194 PLN02209 serine carboxypeptida 96.3 0.077 1.7E-06 49.5 12.1 66 136-208 145-214 (437)
195 PLN03016 sinapoylglucose-malat 96.2 0.11 2.3E-06 48.5 12.7 48 162-209 162-213 (433)
196 KOG1282 Serine carboxypeptidas 96.1 0.13 2.8E-06 48.0 12.6 48 162-209 165-216 (454)
197 cd00519 Lipase_3 Lipase (class 96.1 0.02 4.4E-07 48.6 6.8 43 163-206 126-168 (229)
198 PF01083 Cutinase: Cutinase; 96.0 0.047 1E-06 44.4 8.2 40 162-203 78-119 (179)
199 COG2939 Carboxypeptidase C (ca 95.9 0.068 1.5E-06 49.6 9.9 66 132-208 173-238 (498)
200 PF08386 Abhydrolase_4: TAP-li 95.8 0.031 6.8E-07 40.9 5.8 58 260-328 35-94 (103)
201 PLN02454 triacylglycerol lipas 95.8 0.028 6.1E-07 51.3 6.6 23 166-188 229-251 (414)
202 smart00824 PKS_TE Thioesterase 95.3 0.11 2.4E-06 42.7 8.5 84 103-204 15-100 (212)
203 PLN02517 phosphatidylcholine-s 95.0 0.082 1.8E-06 50.3 7.2 90 103-206 158-263 (642)
204 KOG2541 Palmitoyl protein thio 95.0 0.35 7.6E-06 41.3 10.2 102 82-204 24-126 (296)
205 PLN02633 palmitoyl protein thi 94.6 0.47 1E-05 41.7 10.4 105 81-206 25-131 (314)
206 PLN02408 phospholipase A1 94.3 0.13 2.8E-06 46.4 6.5 24 165-188 200-223 (365)
207 PLN02571 triacylglycerol lipas 94.1 0.15 3.1E-06 46.8 6.5 22 166-187 227-248 (413)
208 PLN00413 triacylglycerol lipas 93.8 0.12 2.6E-06 47.9 5.4 24 162-185 281-304 (479)
209 PLN02802 triacylglycerol lipas 93.5 0.21 4.7E-06 46.7 6.4 24 165-188 330-353 (509)
210 COG5153 CVT17 Putative lipase 93.4 0.19 4.1E-06 43.2 5.5 26 162-187 273-298 (425)
211 KOG4540 Putative lipase essent 93.4 0.19 4.1E-06 43.2 5.5 26 162-187 273-298 (425)
212 PF02089 Palm_thioest: Palmito 93.4 0.45 9.8E-06 41.3 7.9 37 165-206 80-116 (279)
213 PLN02934 triacylglycerol lipas 93.3 0.16 3.5E-06 47.5 5.4 25 162-186 318-342 (515)
214 PLN02162 triacylglycerol lipas 93.1 0.19 4E-06 46.6 5.5 23 164-186 277-299 (475)
215 KOG2182 Hydrolytic enzymes of 93.0 0.93 2E-05 42.2 9.7 120 63-203 71-204 (514)
216 KOG4569 Predicted lipase [Lipi 92.5 0.4 8.7E-06 43.2 6.7 42 136-190 155-196 (336)
217 KOG1551 Uncharacterized conser 92.4 3.2 6.9E-05 35.6 11.3 58 261-328 308-366 (371)
218 PLN02324 triacylglycerol lipas 92.3 0.24 5.3E-06 45.3 5.1 22 165-186 215-236 (415)
219 PLN02753 triacylglycerol lipas 92.3 0.26 5.7E-06 46.3 5.3 24 164-187 311-334 (531)
220 PF08237 PE-PPE: PE-PPE domain 92.0 1.1 2.5E-05 37.7 8.5 63 115-188 2-71 (225)
221 PLN03037 lipase class 3 family 91.9 0.34 7.3E-06 45.6 5.5 23 165-187 318-340 (525)
222 COG3673 Uncharacterized conser 91.6 3.5 7.6E-05 36.4 10.9 41 135-187 104-144 (423)
223 PLN02719 triacylglycerol lipas 91.5 0.36 7.9E-06 45.3 5.3 24 165-188 298-321 (518)
224 KOG2369 Lecithin:cholesterol a 91.3 0.51 1.1E-05 43.6 5.9 72 103-188 126-205 (473)
225 PLN02310 triacylglycerol lipas 91.3 0.27 5.9E-06 44.9 4.2 23 165-187 209-231 (405)
226 PLN02761 lipase class 3 family 91.2 0.35 7.6E-06 45.5 4.9 23 165-187 294-316 (527)
227 PF04301 DUF452: Protein of un 91.1 1.2 2.6E-05 37.2 7.4 33 165-205 57-89 (213)
228 PF10605 3HBOH: 3HB-oligomer h 90.3 1.2 2.6E-05 42.6 7.5 69 260-328 556-637 (690)
229 PLN02847 triacylglycerol lipas 90.0 0.65 1.4E-05 44.4 5.5 23 165-187 251-273 (633)
230 PLN02213 sinapoylglucose-malat 87.2 3.4 7.4E-05 37.0 8.1 48 162-209 48-99 (319)
231 COG4287 PqaA PhoPQ-activated p 86.9 4.3 9.3E-05 36.6 8.2 41 137-187 216-256 (507)
232 KOG2521 Uncharacterized conser 86.3 25 0.00055 31.8 15.1 63 261-329 227-291 (350)
233 PF06259 Abhydrolase_8: Alpha/ 85.3 5.1 0.00011 32.5 7.4 38 163-206 107-145 (177)
234 PF10081 Abhydrolase_9: Alpha/ 84.4 7.6 0.00016 33.8 8.4 103 88-206 40-147 (289)
235 PF09994 DUF2235: Uncharacteri 82.2 2.6 5.6E-05 36.9 4.9 43 134-188 73-115 (277)
236 PF04083 Abhydro_lipase: Parti 79.9 6.1 0.00013 25.9 4.9 42 44-90 9-51 (63)
237 PF05277 DUF726: Protein of un 78.6 6.2 0.00013 35.6 6.1 42 164-206 219-260 (345)
238 KOG2565 Predicted hydrolases o 76.2 22 0.00048 32.3 8.7 92 79-189 149-253 (469)
239 PF06850 PHB_depo_C: PHB de-po 74.4 3.9 8.5E-05 33.4 3.4 73 253-328 128-202 (202)
240 KOG1283 Serine carboxypeptidas 70.5 24 0.00052 31.4 7.4 133 60-209 13-169 (414)
241 PF12242 Eno-Rase_NADH_b: NAD( 69.0 18 0.0004 24.7 5.0 42 135-186 20-61 (78)
242 PF05576 Peptidase_S37: PS-10 68.9 7.7 0.00017 35.6 4.3 94 81-202 62-165 (448)
243 KOG2029 Uncharacterized conser 65.9 20 0.00044 34.6 6.5 25 163-187 524-548 (697)
244 KOG4372 Predicted alpha/beta h 65.4 9.1 0.0002 35.0 4.0 20 164-183 149-168 (405)
245 COG0431 Predicted flavoprotein 64.8 19 0.00042 29.2 5.7 66 103-187 58-123 (184)
246 PF12146 Hydrolase_4: Putative 64.2 22 0.00047 24.4 5.0 61 261-326 18-79 (79)
247 COG2830 Uncharacterized protei 58.1 28 0.00062 27.6 5.1 32 165-204 57-88 (214)
248 TIGR00632 vsr DNA mismatch end 57.6 20 0.00044 26.8 4.0 14 81-94 55-68 (117)
249 KOG1202 Animal-type fatty acid 57.5 56 0.0012 34.8 8.1 96 80-204 2121-2217(2376)
250 PF06500 DUF1100: Alpha/beta h 55.8 9.5 0.00021 35.2 2.5 63 261-327 191-254 (411)
251 TIGR02690 resist_ArsH arsenica 54.3 37 0.00081 28.5 5.6 50 114-178 92-141 (219)
252 KOG4127 Renal dipeptidase [Pos 52.2 61 0.0013 29.3 6.7 82 81-176 265-346 (419)
253 PF10686 DUF2493: Protein of u 48.8 33 0.00071 23.0 3.7 34 81-121 30-63 (71)
254 COG3340 PepE Peptidase E [Amin 48.3 30 0.00065 28.8 4.0 44 80-126 30-73 (224)
255 COG0541 Ffh Signal recognition 43.0 2.9E+02 0.0063 26.0 10.9 114 80-201 97-246 (451)
256 cd07224 Pat_like Patatin-like 42.8 27 0.00059 29.6 3.2 26 162-187 26-51 (233)
257 COG4425 Predicted membrane pro 42.0 77 0.0017 29.7 5.9 80 84-180 324-412 (588)
258 cd00883 beta_CA_cladeA Carboni 40.4 43 0.00094 27.2 3.9 34 137-183 66-99 (182)
259 PLN03006 carbonate dehydratase 40.4 40 0.00086 29.8 3.8 33 138-183 158-190 (301)
260 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.9 39 0.00084 27.0 3.2 19 168-186 31-49 (175)
261 PF05576 Peptidase_S37: PS-10 35.3 1E+02 0.0022 28.7 5.7 61 260-326 352-412 (448)
262 PLN02213 sinapoylglucose-malat 35.0 87 0.0019 28.0 5.3 62 261-328 235-317 (319)
263 PF06309 Torsin: Torsin; Inte 34.9 52 0.0011 25.0 3.2 18 80-100 50-67 (127)
264 PLN00416 carbonate dehydratase 34.7 57 0.0012 28.2 3.9 34 137-183 125-158 (258)
265 cd07230 Pat_TGL4-5_like Triacy 34.7 37 0.0008 31.7 3.0 25 162-188 100-124 (421)
266 cd00382 beta_CA Carbonic anhyd 34.2 64 0.0014 24.1 3.7 32 136-180 43-74 (119)
267 cd07212 Pat_PNPLA9 Patatin-lik 34.1 29 0.00064 30.9 2.2 18 168-185 35-52 (312)
268 cd00884 beta_CA_cladeB Carboni 34.0 64 0.0014 26.4 4.0 34 137-183 72-105 (190)
269 cd07210 Pat_hypo_W_succinogene 33.9 48 0.001 27.9 3.3 23 162-186 27-49 (221)
270 PRK15219 carbonic anhydrase; P 33.4 63 0.0014 27.7 3.9 34 137-183 128-161 (245)
271 cd01301 rDP_like renal dipepti 32.2 2.5E+02 0.0054 25.0 7.7 77 81-172 188-264 (309)
272 PF00484 Pro_CA: Carbonic anhy 32.2 1.1E+02 0.0023 23.8 4.9 36 135-183 38-73 (153)
273 COG0288 CynT Carbonic anhydras 32.0 57 0.0012 27.2 3.4 38 136-186 76-113 (207)
274 PLN03014 carbonic anhydrase 32.0 59 0.0013 29.3 3.6 34 137-183 205-238 (347)
275 cd07207 Pat_ExoU_VipD_like Exo 31.8 30 0.00064 28.1 1.7 21 167-187 29-49 (194)
276 PRK05077 frsA fermentation/res 31.3 1.8E+02 0.0039 27.1 7.0 64 261-328 195-259 (414)
277 PLN02154 carbonic anhydrase 31.3 77 0.0017 27.9 4.1 34 137-183 151-184 (290)
278 TIGR02240 PHA_depoly_arom poly 31.2 1.5E+02 0.0033 25.3 6.2 61 261-327 27-87 (276)
279 COG4635 HemG Flavodoxin [Energ 31.1 1.7E+02 0.0036 23.3 5.5 66 261-328 2-73 (175)
280 KOG1752 Glutaredoxin and relat 30.5 2.1E+02 0.0045 20.9 5.7 77 80-186 12-90 (104)
281 KOG2385 Uncharacterized conser 30.4 1.4E+02 0.0029 28.7 5.7 40 163-203 445-484 (633)
282 PRK10279 hypothetical protein; 30.3 57 0.0012 28.9 3.3 22 162-185 32-53 (300)
283 PF00450 Peptidase_S10: Serine 30.1 45 0.00098 30.7 2.8 61 261-326 332-414 (415)
284 PTZ00472 serine carboxypeptida 29.4 1.4E+02 0.003 28.3 5.9 63 261-328 366-459 (462)
285 cd07211 Pat_PNPLA8 Patatin-lik 29.3 38 0.00083 30.0 2.1 17 168-184 44-60 (308)
286 cd07225 Pat_PNPLA6_PNPLA7 Pata 29.0 63 0.0014 28.7 3.4 22 162-185 42-63 (306)
287 cd07198 Patatin Patatin-like p 28.9 63 0.0014 25.7 3.1 22 166-187 27-48 (172)
288 PRK04531 acetylglutamate kinas 28.9 1.8E+02 0.0039 27.0 6.4 27 84-122 68-94 (398)
289 PF14253 AbiH: Bacteriophage a 28.3 37 0.00079 29.3 1.8 18 163-180 233-250 (270)
290 PF01734 Patatin: Patatin-like 28.2 43 0.00093 26.6 2.1 20 167-186 29-48 (204)
291 PLN03019 carbonic anhydrase 28.0 71 0.0015 28.6 3.4 33 138-183 201-233 (330)
292 PRK10437 carbonic anhydrase; P 26.6 1.1E+02 0.0023 25.8 4.1 34 137-183 76-109 (220)
293 PF12122 DUF3582: Protein of u 26.3 2.6E+02 0.0055 20.3 5.6 49 275-327 12-60 (101)
294 cd07228 Pat_NTE_like_bacteria 26.1 46 0.00099 26.6 1.8 21 167-187 30-50 (175)
295 PF05577 Peptidase_S28: Serine 26.1 74 0.0016 29.7 3.5 42 261-309 378-419 (434)
296 PLN03016 sinapoylglucose-malat 25.8 1.5E+02 0.0032 27.9 5.4 62 261-328 349-431 (433)
297 PLN02209 serine carboxypeptida 25.6 1.6E+02 0.0035 27.7 5.5 61 261-327 353-434 (437)
298 PF00004 AAA: ATPase family as 24.6 1.1E+02 0.0023 22.5 3.6 55 86-147 1-55 (132)
299 KOG1282 Serine carboxypeptidas 24.5 1.3E+02 0.0028 28.5 4.7 63 261-328 365-448 (454)
300 cd07213 Pat17_PNPLA8_PNPLA9_li 24.4 50 0.0011 29.0 1.9 19 168-186 37-55 (288)
301 PRK10824 glutaredoxin-4; Provi 23.5 3.2E+02 0.0068 20.3 6.9 82 80-187 13-94 (115)
302 cd07217 Pat17_PNPLA8_PNPLA9_li 23.4 55 0.0012 29.7 2.0 18 168-185 44-61 (344)
303 TIGR01250 pro_imino_pep_2 prol 23.2 2.7E+02 0.0058 23.3 6.3 62 261-326 27-91 (288)
304 cd07199 Pat17_PNPLA8_PNPLA9_li 22.9 54 0.0012 28.2 1.8 18 168-185 37-54 (258)
305 cd07204 Pat_PNPLA_like Patatin 22.5 96 0.0021 26.5 3.2 19 168-186 34-52 (243)
306 cd07214 Pat17_isozyme_like Pat 22.5 52 0.0011 29.9 1.7 18 168-185 46-63 (349)
307 cd07222 Pat_PNPLA4 Patatin-lik 22.4 88 0.0019 26.7 3.0 17 168-184 34-50 (246)
308 cd07216 Pat17_PNPLA8_PNPLA9_li 22.1 51 0.0011 29.3 1.5 17 168-184 45-61 (309)
309 PF08484 Methyltransf_14: C-me 21.7 2.1E+02 0.0045 22.7 4.8 37 164-206 68-104 (160)
310 cd07209 Pat_hypo_Ecoli_Z1214_l 21.7 62 0.0013 27.0 1.8 20 168-187 29-48 (215)
311 TIGR02717 AcCoA-syn-alpha acet 21.5 6.7E+02 0.015 23.6 8.9 34 135-179 277-310 (447)
312 cd07218 Pat_iPLA2 Calcium-inde 21.3 1.1E+02 0.0023 26.3 3.2 19 169-187 34-52 (245)
313 PLN02578 hydrolase 21.3 2.4E+02 0.0052 25.4 5.8 63 260-328 87-149 (354)
314 PF13207 AAA_17: AAA domain; P 21.1 60 0.0013 23.7 1.5 32 85-123 1-32 (121)
315 cd03378 beta_CA_cladeC Carboni 20.9 1.7E+02 0.0038 23.0 4.1 32 137-181 77-108 (154)
316 TIGR02193 heptsyl_trn_I lipopo 20.6 2.9E+02 0.0062 24.4 6.0 38 81-121 178-217 (319)
317 COG4792 EscU Type III secretor 20.6 6.1E+02 0.013 22.6 8.1 91 37-148 246-344 (349)
318 cd07208 Pat_hypo_Ecoli_yjju_li 20.4 71 0.0015 27.6 2.0 20 168-187 30-49 (266)
319 cd03379 beta_CA_cladeD Carboni 20.4 1.8E+02 0.0039 22.4 4.1 32 137-181 41-72 (142)
320 cd07227 Pat_Fungal_NTE1 Fungal 20.3 67 0.0014 28.0 1.8 18 168-185 41-58 (269)
321 PRK05579 bifunctional phosphop 20.2 7E+02 0.015 23.2 8.5 76 81-172 116-196 (399)
322 KOG1252 Cystathionine beta-syn 20.2 2.4E+02 0.0052 25.5 5.1 23 165-187 303-327 (362)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=1.9e-42 Score=303.48 Aligned_cols=297 Identities=42% Similarity=0.714 Sum_probs=257.4
Q ss_pred cceEEEeecCcEEEeccC-CCCCCCCCCCCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcc
Q 042745 15 SPLIRVYKDGRVERFVGN-DTVPPSFDPKTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGF 93 (331)
Q Consensus 15 ~~~~~~~~~~~~~r~~~~-~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~ 93 (331)
...++...++++.|++.. +..|+..++..+|..++|++.. .+.+.+++|.|.... ..++.|+|||+|||||
T Consensus 30 ~~~i~i~~~~~~~r~~~~~~~~p~~~~p~~~v~~~dv~~~~-----~~~l~vRly~P~~~~---~~~~~p~lvyfHGGGf 101 (336)
T KOG1515|consen 30 FENIRIFKDGSFERFFGRFDKVPPSSDPVNGVTSKDVTIDP-----FTNLPVRLYRPTSSS---SETKLPVLVYFHGGGF 101 (336)
T ss_pred hhhceeecCCceeeeecccccCCCCCCcccCceeeeeEecC-----CCCeEEEEEcCCCCC---cccCceEEEEEeCCcc
Confidence 467899999999999986 7888888888999999999988 889999999999972 2378999999999999
Q ss_pred cccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCC
Q 042745 94 CIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDS 173 (331)
Q Consensus 94 ~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S 173 (331)
+.|+.....|..++.+++.+.++.|+++|||++|++++|...+|+++++.|+.++. |+..+.|++||+|+|+|
T Consensus 102 ~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~-------~~~~~~D~~rv~l~GDS 174 (336)
T KOG1515|consen 102 CLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNS-------WLKLGADPSRVFLAGDS 174 (336)
T ss_pred EeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhH-------HHHhCCCcccEEEEccC
Confidence 99997777799999999999999999999999999999999999999999999862 44455999999999999
Q ss_pred chHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCcc------CchhhhHHHHHHHhhccCCCCCCCCCCCCC
Q 042745 174 AGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETT------DAKHRAFFDGIWRMGYRSETNGCDDPWINP 247 (331)
Q Consensus 174 ~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (331)
+||++|.+++.+..+.....+.++|.|+++|++...+....+.. ...........|....+....+..++.++|
T Consensus 175 aGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np 254 (336)
T KOG1515|consen 175 AGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINP 254 (336)
T ss_pred ccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccc
Confidence 99999999999987654334589999999999998877665332 223667778889988887723789999999
Q ss_pred CC-CCC-CcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 248 CV-EGS-SLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 248 ~~-~~~-~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
.. ..+ +.....+||+||+.++.|.+.+++..|+++|++.|+ ++++..++++.|+|..+.+..+++.++++.+.+|+
T Consensus 255 ~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv--~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi 332 (336)
T KOG1515|consen 255 VGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGV--EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFI 332 (336)
T ss_pred cccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCC--eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHH
Confidence 87 322 444555669999999999999999999999999999 99999999999999999887889999999999999
Q ss_pred hcc
Q 042745 326 NLQ 328 (331)
Q Consensus 326 ~~~ 328 (331)
++.
T Consensus 333 ~~~ 335 (336)
T KOG1515|consen 333 KSN 335 (336)
T ss_pred hhc
Confidence 864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=2.8e-37 Score=275.23 Aligned_cols=258 Identities=23% Similarity=0.294 Sum_probs=207.5
Q ss_pred cccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC
Q 042745 45 VDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR 124 (331)
Q Consensus 45 v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr 124 (331)
+..+++++++. ++.+.+++|.|... +.|+|||+|||||..|+... +..+++.++.+.|+.|+++|||
T Consensus 55 ~~~~~~~i~~~----~g~i~~~~y~P~~~-------~~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYr 121 (318)
T PRK10162 55 MATRAYMVPTP----YGQVETRLYYPQPD-------SQATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYT 121 (318)
T ss_pred ceEEEEEEecC----CCceEEEEECCCCC-------CCCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCC
Confidence 45788888862 34699999999643 36999999999999998765 6678888888789999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 125 RAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 125 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
++|++++|..++|+.++++|+.++..+++ +|++||+|+|+|+||++|+.++.+..+.+.....++++++++|
T Consensus 122 lape~~~p~~~~D~~~a~~~l~~~~~~~~--------~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 122 LSPEARFPQAIEEIVAVCCYFHQHAEDYG--------INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHhHHHhC--------CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 99999999999999999999999877776 8999999999999999999999876654432247999999999
Q ss_pred cccCCCCCCC--C--ccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCc-ccCCCCeEEEEEeCCCccchhHHHH
Q 042745 205 YFWGSTPVGN--E--TTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSL-ASMGCARVLVFVAEKDKLAARGWLY 279 (331)
Q Consensus 205 ~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~Pvli~~G~~D~~v~~~~~~ 279 (331)
+++....... . .........+.+++..+.+.. ....++..+|... ++ ..++ |++|++|+.|++.++++.|
T Consensus 194 ~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~-~~~~~p~~~p~~~--~l~~~lP--p~~i~~g~~D~L~de~~~~ 268 (318)
T PRK10162 194 LYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSND-ADRESPYYCLFNN--DLTRDVP--PCFIAGAEFDPLLDDSRLL 268 (318)
T ss_pred ccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCc-cccCCcccCcchh--hhhcCCC--CeEEEecCCCcCcChHHHH
Confidence 9875322110 0 001123445667777776654 3445566666432 55 4444 9999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 280 YEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 280 ~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
+++|+++|+ ++++++++|+.|+|..+.+..++++++++.+.+||+++++
T Consensus 269 ~~~L~~aGv--~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 269 YQTLAAHQQ--PCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHcCC--CEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999 9999999999999987766778999999999999998875
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=7.6e-34 Score=253.39 Aligned_cols=245 Identities=29% Similarity=0.445 Sum_probs=200.0
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHH
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSW 139 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~ 139 (331)
+..+++++|.|... ...+.|+|||+|||||..|+... +...+..++...|+.|+++|||+.|++++|..++|+.
T Consensus 61 ~~~~~~~~y~p~~~----~~~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~ 134 (312)
T COG0657 61 GDGVPVRVYRPDRK----AAATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAY 134 (312)
T ss_pred CCceeEEEECCCCC----CCCCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHH
Confidence 56699999999222 24679999999999999999876 5688889999899999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCC----
Q 042745 140 AAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNE---- 215 (331)
Q Consensus 140 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~---- 215 (331)
++++|+.++..+++ +|++||+|+|+|+||++|+.++....+.+. +.+.+.++++|+++........
T Consensus 135 ~a~~~l~~~~~~~g--------~dp~~i~v~GdSAGG~La~~~a~~~~~~~~--~~p~~~~li~P~~d~~~~~~~~~~~~ 204 (312)
T COG0657 135 AAYRWLRANAAELG--------IDPSRIAVAGDSAGGHLALALALAARDRGL--PLPAAQVLISPLLDLTSSAASLPGYG 204 (312)
T ss_pred HHHHHHHhhhHhhC--------CCccceEEEecCcccHHHHHHHHHHHhcCC--CCceEEEEEecccCCcccccchhhcC
Confidence 99999999988887 999999999999999999999998876543 3789999999999887511111
Q ss_pred ccCchhhhHHH-HHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEE
Q 042745 216 TTDAKHRAFFD-GIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEI 294 (331)
Q Consensus 216 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~ 294 (331)
........... +++..+.... ....++..+|+... .+..+ ||++|++|+.|.+.++++.|+++|+++|+ ++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~spl~~~-~~~~l--PP~~i~~a~~D~l~~~~~~~a~~L~~agv--~~~~ 278 (312)
T COG0657 205 EADLLDAAAILAWFADLYLGAA-PDREDPEASPLASD-DLSGL--PPTLIQTAEFDPLRDEGEAYAERLRAAGV--PVEL 278 (312)
T ss_pred CccccCHHHHHHHHHHHhCcCc-cccCCCccCccccc-cccCC--CCEEEEecCCCcchhHHHHHHHHHHHcCC--eEEE
Confidence 11112333333 5666665544 45555778888774 35554 49999999999999999999999999999 9999
Q ss_pred EEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 295 VETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 295 ~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+.++++.|+|..... +++.+.+..+.+|++..
T Consensus 279 ~~~~g~~H~f~~~~~--~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 279 RVYPGMIHGFDLLTG--PEARSALRQIAAFLRAA 310 (312)
T ss_pred EEeCCcceeccccCc--HHHHHHHHHHHHHHHHh
Confidence 999999999976553 77888899999998844
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=100.00 E-value=7.2e-33 Score=233.47 Aligned_cols=202 Identities=30% Similarity=0.461 Sum_probs=159.8
Q ss_pred EEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCC
Q 042745 85 LVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADF 164 (331)
Q Consensus 85 vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 164 (331)
|||+|||||+.|+... ...++..++.+.|+.|+++|||++|+.++++.++|+.++++|+.++..+++ +|+
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~--------~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLG--------IDP 70 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHT--------EEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccc--------ccc
Confidence 7999999999999876 678888998867999999999999999999999999999999999976665 899
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC-CCCCCCC------cc-CchhhhHHHHHHHhhccCC
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG-STPVGNE------TT-DAKHRAFFDGIWRMGYRSE 236 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~-~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~ 236 (331)
++|+|+|+|+||++|+.++.+..+... ..++++++++|+.+. ....... .. ..........++..+.+ .
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~--~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 147 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGL--PKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-G 147 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTT--CHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-T
T ss_pred cceEEeecccccchhhhhhhhhhhhcc--cchhhhhcccccccchhcccccccccccccccccccccccccccccccc-c
Confidence 999999999999999999988776543 269999999999876 2211111 11 11234555566666654 3
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeee
Q 042745 237 TNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFH 305 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~ 305 (331)
....++.++|+... +++++ ||++|++|+.|.++++++.|+++|++.|+ ++++++++|+.|+|.
T Consensus 148 -~~~~~~~~sp~~~~-~~~~~--Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv--~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 148 -SDRDDPLASPLNAS-DLKGL--PPTLIIHGEDDVLVDDSLRFAEKLKKAGV--DVELHVYPGMPHGFF 210 (211)
T ss_dssp -GGTTSTTTSGGGSS-CCTTC--HEEEEEEETTSTTHHHHHHHHHHHHHTT---EEEEEEETTEETTGG
T ss_pred -cccccccccccccc-ccccC--CCeeeeccccccchHHHHHHHHHHHHCCC--CEEEEEECCCeEEee
Confidence 45667888888752 44444 49999999999999999999999999998 999999999999876
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.95 E-value=2.3e-26 Score=221.81 Aligned_cols=244 Identities=20% Similarity=0.210 Sum_probs=179.4
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
.....+.++|++ .||..+.++++.|.+. +..++.|+||++|||.+..-.. .+...+..++ ..||+|+.+|
T Consensus 361 ~~~~~e~~~~~~---~dG~~i~~~l~~P~~~---~~~k~yP~i~~~hGGP~~~~~~---~~~~~~q~~~-~~G~~V~~~n 430 (620)
T COG1506 361 KLAEPEPVTYKS---NDGETIHGWLYKPPGF---DPRKKYPLIVYIHGGPSAQVGY---SFNPEIQVLA-SAGYAVLAPN 430 (620)
T ss_pred ccCCceEEEEEc---CCCCEEEEEEecCCCC---CCCCCCCEEEEeCCCCcccccc---ccchhhHHHh-cCCeEEEEeC
Confidence 445568889986 7788999999999998 4456689999999997544332 2455566665 5599999999
Q ss_pred CCCCCCC-----------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccccc
Q 042745 123 YRRAPEN-----------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREIL 191 (331)
Q Consensus 123 yr~~~~~-----------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~ 191 (331)
||++..+ .....++|+.++++|+.+... +|++||+|+|+|+||++++.++.+.+
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~-----------~d~~ri~i~G~SyGGymtl~~~~~~~---- 495 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPL-----------VDPERIGITGGSYGGYMTLLAATKTP---- 495 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCC-----------cChHHeEEeccChHHHHHHHHHhcCc----
Confidence 9988652 234578999999999977753 89999999999999999999999886
Q ss_pred CCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCC-CCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCC
Q 042745 192 DGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSET-NGCDDPWINPCVEGSSLASMGCARVLVFVAEKD 270 (331)
Q Consensus 192 ~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D 270 (331)
.+++++...+..+........... ....+........ ........||+. ...++++ |+||+||+.|
T Consensus 496 ---~f~a~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~sp~~---~~~~i~~-P~LliHG~~D 562 (620)
T COG1506 496 ---RFKAAVAVAGGVDWLLYFGESTEG------LRFDPEENGGGPPEDREKYEDRSPIF---YADNIKT-PLLLIHGEED 562 (620)
T ss_pred ---hhheEEeccCcchhhhhccccchh------hcCCHHHhCCCcccChHHHHhcChhh---hhcccCC-CEEEEeecCC
Confidence 588888777755433222111100 0001111111000 011233456666 4556666 9999999999
Q ss_pred ccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 271 KLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 271 ~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
..|+ +++.|+++|+..|+ ++++++||+.+|.+.. .++..+.++++++|++++++
T Consensus 563 ~~v~~~q~~~~~~aL~~~g~--~~~~~~~p~e~H~~~~----~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 563 DRVPIEQAEQLVDALKRKGK--PVELVVFPDEGHGFSR----PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred ccCChHHHHHHHHHHHHcCc--eEEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHHhc
Confidence 8886 99999999999998 9999999999998873 24668899999999999875
No 6
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.90 E-value=1.6e-23 Score=176.74 Aligned_cols=190 Identities=20% Similarity=0.185 Sum_probs=131.9
Q ss_pred HHHHHhcCCeEEEEecCCCCCCC----------CC-CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCch
Q 042745 107 LNALVSACNVVAVSVDYRRAPEN----------PV-PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAG 175 (331)
Q Consensus 107 ~~~la~~~G~~vv~~dyr~~~~~----------~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 175 (331)
..+++++.||+|+.+|||+++.+ .+ ...++|+.++++|+.++.. +|++||+|+|+|+|
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-----------iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY-----------IDPDRIGIMGHSYG 74 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS-----------EEEEEEEEEEETHH
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc-----------ccceeEEEEccccc
Confidence 34555577999999999998742 11 2357899999999988752 89999999999999
Q ss_pred HHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHH-HHHHhhccCCCCCCCCCCCCCCCCCCCc
Q 042745 176 ANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFD-GIWRMGYRSETNGCDDPWINPCVEGSSL 254 (331)
Q Consensus 176 G~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (331)
|++|+.++.+.++ .++++++.+|+.+.......... ... .......+.. ........+|+. .+
T Consensus 75 G~~a~~~~~~~~~------~f~a~v~~~g~~d~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~s~~~---~~ 138 (213)
T PF00326_consen 75 GYLALLAATQHPD------RFKAAVAGAGVSDLFSYYGTTDI------YTKAEYLEYGDPWD-NPEFYRELSPIS---PA 138 (213)
T ss_dssp HHHHHHHHHHTCC------GSSEEEEESE-SSTTCSBHHTCC------HHHGHHHHHSSTTT-SHHHHHHHHHGG---GG
T ss_pred ccccchhhcccce------eeeeeeccceecchhcccccccc------cccccccccCccch-hhhhhhhhcccc---cc
Confidence 9999999997765 79999999999876544322111 011 1111100000 000001123333 23
Q ss_pred cc--CCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 255 AS--MGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 255 ~~--~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
.+ ++. |+||+||++|..|+ ++.+++++|++.|+ +++++++++++|.+.. .+...+..+++.+||+++++
T Consensus 139 ~~~~~~~-P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~--~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 139 DNVQIKP-PVLIIHGENDPRVPPSQSLRLYNALRKAGK--PVELLIFPGEGHGFGN----PENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGCGGGS-EEEEEEETTBSSSTTHHHHHHHHHHHHTTS--SEEEEEETT-SSSTTS----HHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCC-CEEEEccCCCCccCHHHHHHHHHHHHhcCC--CEEEEEcCcCCCCCCC----chhHHHHHHHHHHHHHHHcC
Confidence 33 343 99999999999986 89999999999998 8999999999996552 24556899999999999886
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=8e-22 Score=177.45 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=155.1
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
.++..++..+.+ .|+..+..+.|.|.+. ..++++||++||.+- +.. ..+..++..++ +.||.|+++|
T Consensus 28 ~~~~~~~~~~~~---~dg~~l~~~~~~~~~~-----~~~~~~VvllHG~~~---~~~-~~~~~~~~~L~-~~Gy~V~~~D 94 (330)
T PLN02298 28 KGIKGSKSFFTS---PRGLSLFTRSWLPSSS-----SPPRALIFMVHGYGN---DIS-WTFQSTAIFLA-QMGFACFALD 94 (330)
T ss_pred cCCccccceEEc---CCCCEEEEEEEecCCC-----CCCceEEEEEcCCCC---Ccc-eehhHHHHHHH-hCCCEEEEec
Confidence 345556666664 4577899988988653 246789999999542 111 11344455565 4599999999
Q ss_pred CCCCCCCC--------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCC
Q 042745 123 YRRAPENP--------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGF 194 (331)
Q Consensus 123 yr~~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~ 194 (331)
+|+++... +....+|+..+++++..... .+..+++|+||||||.+|+.++.+.+.
T Consensus 95 ~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-----------~~~~~i~l~GhSmGG~ia~~~a~~~p~------ 157 (330)
T PLN02298 95 LEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE-----------FQGLPRFLYGESMGGAICLLIHLANPE------ 157 (330)
T ss_pred CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc-----------CCCCCEEEEEecchhHHHHHHHhcCcc------
Confidence 99987543 22346788888888876422 334579999999999999999987764
Q ss_pred ceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCC----CCCCCC-----------CCCCCC----------
Q 042745 195 NVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSET----NGCDDP-----------WINPCV---------- 249 (331)
Q Consensus 195 ~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----------~~~~~~---------- 249 (331)
.++++|+++|+.......... ..... .......+.+... ...... ..++..
T Consensus 158 ~v~~lvl~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (330)
T PLN02298 158 GFDGAVLVAPMCKISDKIRPP---WPIPQ-ILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTV 233 (330)
T ss_pred cceeEEEecccccCCcccCCc---hHHHH-HHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHH
Confidence 699999999987543211100 00000 0001111111000 000000 000000
Q ss_pred ---------CCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHH
Q 042745 250 ---------EGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVML 318 (331)
Q Consensus 250 ---------~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 318 (331)
....+..+++ |+||+||++|.+++ .++.+++++... +.+++++++++|......| ....+++.
T Consensus 234 ~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~ivp~~~~~~l~~~i~~~----~~~l~~~~~a~H~~~~e~p-d~~~~~~~ 307 (330)
T PLN02298 234 VELLRVTDYLGKKLKDVSI-PFIVLHGSADVVTDPDVSRALYEEAKSE----DKTIKIYDGMMHSLLFGEP-DENIEIVR 307 (330)
T ss_pred HHHHHHHHHHHHhhhhcCC-CEEEEecCCCCCCCHHHHHHHHHHhccC----CceEEEcCCcEeeeecCCC-HHHHHHHH
Confidence 0013556777 99999999999986 556666666544 4689999999998765443 13346788
Q ss_pred HHHHHHhhccCC
Q 042745 319 QQIASFFNLQDK 330 (331)
Q Consensus 319 ~~i~~fl~~~~~ 330 (331)
+.+.+||.+++.
T Consensus 308 ~~i~~fl~~~~~ 319 (330)
T PLN02298 308 RDILSWLNERCT 319 (330)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 8
>PRK13604 luxD acyl transferase; Provisional
Probab=99.89 E-value=2e-21 Score=168.24 Aligned_cols=204 Identities=10% Similarity=0.092 Sum_probs=134.2
Q ss_pred CCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC-CCC-------
Q 042745 58 NNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA-PEN------- 129 (331)
Q Consensus 58 ~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~-~~~------- 129 (331)
+++..+.+++..|++. ...+.++||+.||-+ +... .+..+++.|+ +.||.|+.+|+|++ ++.
T Consensus 17 ~dG~~L~Gwl~~P~~~----~~~~~~~vIi~HGf~---~~~~--~~~~~A~~La-~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 17 ENGQSIRVWETLPKEN----SPKKNNTILIASGFA---RRMD--HFAGLAEYLS-SNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred CCCCEEEEEEEcCccc----CCCCCCEEEEeCCCC---CChH--HHHHHHHHHH-HCCCEEEEecCCCCCCCCCCccccC
Confidence 5688899999999753 246789999999833 3322 2556666665 66999999998865 432
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCC
Q 042745 130 PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 130 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~ 209 (331)
.......|+.++++|+++. +.++|+|+||||||.+|+.+|... .++++|+.+|+.+..
T Consensus 87 t~s~g~~Dl~aaid~lk~~--------------~~~~I~LiG~SmGgava~~~A~~~--------~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR--------------GINNLGLIAASLSARIAYEVINEI--------DLSFLITAVGVVNLR 144 (307)
T ss_pred cccccHHHHHHHHHHHHhc--------------CCCceEEEEECHHHHHHHHHhcCC--------CCCEEEEcCCcccHH
Confidence 2344678999999999874 236899999999999987666533 589999999998733
Q ss_pred CCCCCCccC-----c-----h-----hhhH-HHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccc
Q 042745 210 TPVGNETTD-----A-----K-----HRAF-FDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLA 273 (331)
Q Consensus 210 ~~~~~~~~~-----~-----~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v 273 (331)
+........ + . .... ...+....+. ...+...+++. ..+++.. |+|++||+.|.+|
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~----~~~~~~~s~i~---~~~~l~~-PvLiIHG~~D~lV 216 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFK----HGWDTLDSTIN---KMKGLDI-PFIAFTANNDSWV 216 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHh----cCccccccHHH---HHhhcCC-CEEEEEcCCCCcc
Confidence 111100000 0 0 0000 0112211100 00111233333 3444555 9999999999999
Q ss_pred h--hHHHHHHHHHhcCCCcceEEEEeCCCceeee
Q 042745 274 A--RGWLYYEKLKESGWKGRAEIVETKGESHVFH 305 (331)
Q Consensus 274 ~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~ 305 (331)
+ .++.+++.++.. ++++++++|+.|.|.
T Consensus 217 p~~~s~~l~e~~~s~----~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 217 KQSEVIDLLDSIRSE----QCKLYSLIGSSHDLG 246 (307)
T ss_pred CHHHHHHHHHHhccC----CcEEEEeCCCccccC
Confidence 7 567777776553 679999999999987
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=4.7e-21 Score=173.71 Aligned_cols=236 Identities=16% Similarity=0.155 Sum_probs=142.8
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC-------
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV------- 131 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~------- 131 (331)
+|..+....|.|.+. .++|+|||+||.|. +... .+..++..++ +.||.|+++|+|+++....
T Consensus 70 ~g~~l~~~~~~p~~~------~~~~~iv~lHG~~~---~~~~-~~~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 70 RGVEIFSKSWLPENS------RPKAAVCFCHGYGD---TCTF-FFEGIARKIA-SSGYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred CCCEEEEEEEecCCC------CCCeEEEEECCCCC---ccch-HHHHHHHHHH-hCCCEEEEecCCCCCCCCCCCCCcCC
Confidence 477888888988654 46799999999543 2111 1235555665 4599999999999875432
Q ss_pred -CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 132 -PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 132 -~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
...++|+...++++..... ++..+++|+||||||.+|+.++.+.++ .++++|+++|......
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~-----------~~~~~~~LvGhSmGG~val~~a~~~p~------~v~glVLi~p~~~~~~ 201 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPE-----------FRGLPSFLFGQSMGGAVALKVHLKQPN------AWDGAILVAPMCKIAD 201 (349)
T ss_pred HHHHHHHHHHHHHHHHhccc-----------cCCCCEEEEEeccchHHHHHHHHhCcc------hhhheeEecccccccc
Confidence 2234566666666544321 344689999999999999999998865 7999999998764322
Q ss_pred CCCCCccCchhhhHHHH------------------------HHHhhccCCCCCCCCCCCC---C-CCC----CCCcccCC
Q 042745 211 PVGNETTDAKHRAFFDG------------------------IWRMGYRSETNGCDDPWIN---P-CVE----GSSLASMG 258 (331)
Q Consensus 211 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~---~-~~~----~~~l~~~~ 258 (331)
..............+.. ....+.... ........ . +.. ...+.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~l~~i~ 279 (349)
T PLN02385 202 DVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIA--YKDKPRLRTAVELLRTTQEIEMQLEEVS 279 (349)
T ss_pred cccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcce--eCCCcchHHHHHHHHHHHHHHHhcccCC
Confidence 11000000000000000 000000000 00000000 0 000 00455677
Q ss_pred CCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 259 CARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 259 ~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
+ |+||++|++|.+++ .++.+++++... +++++++++++|......+ .+..+++++.|++||++++.
T Consensus 280 ~-P~Lii~G~~D~vv~~~~~~~l~~~~~~~----~~~l~~i~~~gH~l~~e~p-~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 280 L-PLLILHGEADKVTDPSVSKFLYEKASSS----DKKLKLYEDAYHSILEGEP-DEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred C-CEEEEEeCCCCccChHHHHHHHHHcCCC----CceEEEeCCCeeecccCCC-hhhHHHHHHHHHHHHHHhcc
Confidence 7 99999999999986 456666655443 4689999999997664433 12245689999999998875
No 10
>PRK10566 esterase; Provisional
Probab=99.88 E-value=1.2e-20 Score=162.96 Aligned_cols=217 Identities=16% Similarity=0.134 Sum_probs=134.3
Q ss_pred ceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-------CC--
Q 042745 62 ALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-------VP-- 132 (331)
Q Consensus 62 ~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-------~~-- 132 (331)
.+....|.|... ..++.|+||++||.+. +... +..++..++ +.||.|+++|||+++... ..
T Consensus 11 ~~~~~~~~p~~~----~~~~~p~vv~~HG~~~---~~~~--~~~~~~~l~-~~G~~v~~~d~~g~G~~~~~~~~~~~~~~ 80 (249)
T PRK10566 11 GIEVLHAFPAGQ----RDTPLPTVFFYHGFTS---SKLV--YSYFAVALA-QAGFRVIMPDAPMHGARFSGDEARRLNHF 80 (249)
T ss_pred CcceEEEcCCCC----CCCCCCEEEEeCCCCc---ccch--HHHHHHHHH-hCCCEEEEecCCcccccCCCccccchhhH
Confidence 455566777653 1356899999999543 3322 455556665 559999999999875321 11
Q ss_pred -----ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe--ccc
Q 042745 133 -----CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV--HPY 205 (331)
Q Consensus 133 -----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~--~p~ 205 (331)
..++|+..+++++.+.. .++.++|+|+|||+||.+|+.++.+.+ .+++.+.+ +++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~i~v~G~S~Gg~~al~~~~~~~-------~~~~~~~~~~~~~ 142 (249)
T PRK10566 81 WQILLQNMQEFPTLRAAIREEG-----------WLLDDRLAVGGASMGGMTALGIMARHP-------WVKCVASLMGSGY 142 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-----------CcCccceeEEeecccHHHHHHHHHhCC-------CeeEEEEeeCcHH
Confidence 23466777788877642 268899999999999999999988765 34444332 222
Q ss_pred ccCCCC--CCC-CccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccC-CCCeEEEEEeCCCccch--hHHHH
Q 042745 206 FWGSTP--VGN-ETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASM-GCARVLVFVAEKDKLAA--RGWLY 279 (331)
Q Consensus 206 ~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~Pvli~~G~~D~~v~--~~~~~ 279 (331)
+..... ... ..............+... . ..++.. .+.++ ++ |+|++||++|.+++ +++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~---~~~~i~~~-P~Lii~G~~D~~v~~~~~~~l 208 (249)
T PRK10566 143 FTSLARTLFPPLIPETAAQQAEFNNIVAPL-----A-----EWEVTH---QLEQLADR-PLLLWHGLADDVVPAAESLRL 208 (249)
T ss_pred HHHHHHHhcccccccccccHHHHHHHHHHH-----h-----hcChhh---hhhhcCCC-CEEEEEcCCCCcCCHHHHHHH
Confidence 210000 000 000000000011111100 0 001100 23333 34 99999999999987 78889
Q ss_pred HHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 280 YEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 280 ~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
.++++.+|.+.+++++.+++++|.+. .+.++++.+||++++
T Consensus 209 ~~~l~~~g~~~~~~~~~~~~~~H~~~---------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 209 QQALRERGLDKNLTCLWEPGVRHRIT---------PEALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHhcCCCcceEEEecCCCCCccC---------HHHHHHHHHHHHhhC
Confidence 99999987633478899999999764 457899999999874
No 11
>PRK10115 protease 2; Provisional
Probab=99.88 E-value=4.7e-21 Score=186.17 Aligned_cols=243 Identities=14% Similarity=0.049 Sum_probs=167.9
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
....+.+++.+ .||..|++.+.++++. ...++.|+||++|||....... .|......++. .|++|+.+++
T Consensus 413 ~~~~e~v~~~s---~DG~~Ip~~l~~~~~~---~~~~~~P~ll~~hGg~~~~~~p---~f~~~~~~l~~-rG~~v~~~n~ 482 (686)
T PRK10115 413 NYRSEHLWITA---RDGVEVPVSLVYHRKH---FRKGHNPLLVYGYGSYGASIDA---DFSFSRLSLLD-RGFVYAIVHV 482 (686)
T ss_pred ccEEEEEEEEC---CCCCEEEEEEEEECCC---CCCCCCCEEEEEECCCCCCCCC---CccHHHHHHHH-CCcEEEEEEc
Confidence 45778899986 7899999977665553 1235679999999965443322 25555556665 5999999999
Q ss_pred CCCCCCC-----------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 124 RRAPENP-----------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 124 r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
|++++.. -...++|+.++++||.++. .+|++|++++|.|+||.++..++.+.++
T Consensus 483 RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g-----------~~d~~rl~i~G~S~GG~l~~~~~~~~Pd---- 547 (686)
T PRK10115 483 RGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLG-----------YGSPSLCYGMGGSAGGMLMGVAINQRPE---- 547 (686)
T ss_pred CCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC-----------CCChHHeEEEEECHHHHHHHHHHhcChh----
Confidence 9986531 2356899999999999864 2899999999999999999999988776
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCC----CCCCCCCCCCCCCcccCCCCeEEEEEeC
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGC----DDPWINPCVEGSSLASMGCARVLVFVAE 268 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~Pvli~~G~ 268 (331)
.++++|+..|+++......... ...... .+.. ++.. ... .....||+. ++.++..|++||+||.
T Consensus 548 --lf~A~v~~vp~~D~~~~~~~~~-~p~~~~----~~~e-~G~p-~~~~~~~~l~~~SP~~---~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 548 --LFHGVIAQVPFVDVVTTMLDES-IPLTTG----EFEE-WGNP-QDPQYYEYMKSYSPYD---NVTAQAYPHLLVTTGL 615 (686)
T ss_pred --heeEEEecCCchhHhhhcccCC-CCCChh----HHHH-hCCC-CCHHHHHHHHHcCchh---ccCccCCCceeEEecC
Confidence 7999999999998654321110 000000 1111 1111 110 012256766 5666666458888999
Q ss_pred CCccch--hHHHHHHHHHhcCCCcceEEEEe---CCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 269 KDKLAA--RGWLYYEKLKESGWKGRAEIVET---KGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 269 ~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~---~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+|..|+ ++.+|+.+|++.+. +++++++ ++++|+.. .+ ....-+......+||-..
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~--~~~~vl~~~~~~~GHg~~--~~-r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKT--DDHLLLLCTDMDSGHGGK--SG-RFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCC--CCceEEEEecCCCCCCCC--cC-HHHHHHHHHHHHHHHHHH
Confidence 999987 89999999999987 7788888 99999833 11 123333444556666544
No 12
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.87 E-value=8.4e-21 Score=160.09 Aligned_cols=232 Identities=18% Similarity=0.171 Sum_probs=155.7
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC--------C
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP--------V 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~--------~ 131 (331)
+..+....|.|... ..++.+|+++||.|-.... .+...+..++ ..||.|+..||++++... +
T Consensus 37 G~~lft~~W~p~~~-----~~pr~lv~~~HG~g~~~s~----~~~~~a~~l~-~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSG-----TEPRGLVFLCHGYGEHSSW----RYQSTAKRLA-KSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred CCEeEEEecccCCC-----CCCceEEEEEcCCcccchh----hHHHHHHHHH-hCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 77899999999775 2688999999996532211 2667777776 459999999999987532 3
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
...++|+..-++.++.+.. ...-..+++||||||.+||.++.+.+. ...|+|+++|.......
T Consensus 107 d~~v~D~~~~~~~i~~~~e-----------~~~lp~FL~GeSMGGAV~Ll~~~k~p~------~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREE-----------NKGLPRFLFGESMGGAVALLIALKDPN------FWDGAILVAPMCKISED 169 (313)
T ss_pred HHHHHHHHHHHHHHhhccc-----------cCCCCeeeeecCcchHHHHHHHhhCCc------ccccceeeecccccCCc
Confidence 3455676666666666543 333568999999999999999998654 79999999998755443
Q ss_pred CCCCccCchhhhHHHHHHHhhccCCC-------------------CCCCCCCCCCCCC---------------CCCcccC
Q 042745 212 VGNETTDAKHRAFFDGIWRMGYRSET-------------------NGCDDPWINPCVE---------------GSSLASM 257 (331)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~---------------~~~l~~~ 257 (331)
........... .....+.|... ....++.+..... ..++..+
T Consensus 170 ~kp~p~v~~~l----~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v 245 (313)
T KOG1455|consen 170 TKPHPPVISIL----TLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV 245 (313)
T ss_pred cCCCcHHHHHH----HHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccc
Confidence 32211000000 01111111100 0111122111110 0044556
Q ss_pred CCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 258 GCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 258 ~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
.. |.+|+||++|.+.+ .++++++...+. +.++.+|||+-|+...-.+ .++.+.+..+|++||+++
T Consensus 246 tv-PflilHG~dD~VTDp~~Sk~Lye~A~S~----DKTlKlYpGm~H~Ll~gE~-~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 246 TV-PFLILHGTDDKVTDPKVSKELYEKASSS----DKTLKLYPGMWHSLLSGEP-DENVEIVFGDIISWLDER 312 (313)
T ss_pred cc-cEEEEecCCCcccCcHHHHHHHHhccCC----CCceeccccHHHHhhcCCC-chhHHHHHHHHHHHHHhc
Confidence 66 99999999999986 678899988887 4589999999998774332 367889999999999876
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.87 E-value=2.1e-20 Score=163.94 Aligned_cols=231 Identities=13% Similarity=0.186 Sum_probs=142.0
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC-------
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV------- 131 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~------- 131 (331)
||..+..++|.|.+. ++++|+++||.+. +... |..++..++ +.||.|+++|+|+++....
T Consensus 9 ~g~~l~~~~~~~~~~-------~~~~v~llHG~~~---~~~~--~~~~~~~l~-~~g~~via~D~~G~G~S~~~~~~~~~ 75 (276)
T PHA02857 9 DNDYIYCKYWKPITY-------PKALVFISHGAGE---HSGR--YEELAENIS-SLGILVFSHDHIGHGRSNGEKMMIDD 75 (276)
T ss_pred CCCEEEEEeccCCCC-------CCEEEEEeCCCcc---ccch--HHHHHHHHH-hCCCEEEEccCCCCCCCCCccCCcCC
Confidence 477899999988533 4689999999542 3322 666666765 4599999999999875421
Q ss_pred -CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 132 -PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 132 -~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
...++|+...+.++.+. ....+++|+|||+||.+|+.++.+.++ .++++|+++|......
T Consensus 76 ~~~~~~d~~~~l~~~~~~-------------~~~~~~~lvG~S~GG~ia~~~a~~~p~------~i~~lil~~p~~~~~~ 136 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKST-------------YPGVPVFLLGHSMGATISILAAYKNPN------LFTAMILMSPLVNAEA 136 (276)
T ss_pred HHHHHHHHHHHHHHHHhh-------------CCCCCEEEEEcCchHHHHHHHHHhCcc------ccceEEEecccccccc
Confidence 12346666666666543 334679999999999999999988764 6999999999765321
Q ss_pred CCCCC--------------ccC---c-hhhhHHHHHHHhhccCCCCCCCCCCC---CCCC---C--CCCcccCCCCeEEE
Q 042745 211 PVGNE--------------TTD---A-KHRAFFDGIWRMGYRSETNGCDDPWI---NPCV---E--GSSLASMGCARVLV 264 (331)
Q Consensus 211 ~~~~~--------------~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~--~~~l~~~~~~Pvli 264 (331)
..... ... . ................. ........ .... . ...+.++++ |+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvli 214 (276)
T PHA02857 137 VPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPL-VNHEKIKAGFASQVLKATNKVRKIIPKIKT-PILI 214 (276)
T ss_pred ccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCC-ccCCCccHHHHHHHHHHHHHHHHhcccCCC-CEEE
Confidence 10000 000 0 00000000000000000 00000000 0000 0 004556777 9999
Q ss_pred EEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 265 FVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 265 ~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
++|++|.+++ .+..+.+.+.. ++++.++++++|...... .+..+++++++.+||.++.+
T Consensus 215 v~G~~D~i~~~~~~~~l~~~~~~-----~~~~~~~~~~gH~~~~e~--~~~~~~~~~~~~~~l~~~~~ 275 (276)
T PHA02857 215 LQGTNNEISDVSGAYYFMQHANC-----NREIKIYEGAKHHLHKET--DEVKKSVMKEIETWIFNRVK 275 (276)
T ss_pred EecCCCCcCChHHHHHHHHHccC-----CceEEEeCCCcccccCCc--hhHHHHHHHHHHHHHHHhcc
Confidence 9999999987 44445444422 468999999999877432 24478899999999998754
No 14
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.87 E-value=4.7e-20 Score=161.47 Aligned_cols=234 Identities=11% Similarity=0.063 Sum_probs=145.5
Q ss_pred ccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC--
Q 042745 46 DSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY-- 123 (331)
Q Consensus 46 ~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy-- 123 (331)
..+.+++.++ ..+..+...+|.|++. ..++.|+|+++||.+. +.........+..++.+.|+.|+.||+
T Consensus 12 ~~~~~~~~s~--~~~~~~~~~v~~P~~~----~~~~~P~vvllHG~~~---~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~ 82 (275)
T TIGR02821 12 TQGFYRHKSE--TCGVPMTFGVFLPPQA----AAGPVPVLWYLSGLTC---THENFMIKAGAQRFAAEHGLALVAPDTSP 82 (275)
T ss_pred EEEEEEEecc--ccCCceEEEEEcCCCc----cCCCCCEEEEccCCCC---CccHHHhhhHHHHHHhhcCcEEEEeCCCC
Confidence 4455555553 2355677999999875 1356899999999653 222211122345677777999999997
Q ss_pred CCCCCCC-------------C------C-----ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHH
Q 042745 124 RRAPENP-------------V------P-----CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIA 179 (331)
Q Consensus 124 r~~~~~~-------------~------~-----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~A 179 (331)
|+..... + + .....+...+..+.+. .++ ++.++++|+|+||||++|
T Consensus 83 ~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~--------~~~~~~~~~G~S~GG~~a 152 (275)
T TIGR02821 83 RGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA--QFP--------LDGERQGITGHSMGGHGA 152 (275)
T ss_pred CcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh--hCC--------CCCCceEEEEEChhHHHH
Confidence 3321100 0 0 1112222222222221 122 778999999999999999
Q ss_pred HHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCC
Q 042745 180 HHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGC 259 (331)
Q Consensus 180 l~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 259 (331)
+.++.+.++ .++++++++|+.+..... .. ...+..+.... .......++........ . .
T Consensus 153 ~~~a~~~p~------~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~l~~~--~~~~~~~~~~~~~~~~~-~-~ 211 (275)
T TIGR02821 153 LVIALKNPD------RFKSVSAFAPIVAPSRCP-------WG----QKAFSAYLGAD--EAAWRSYDASLLVADGG-R-H 211 (275)
T ss_pred HHHHHhCcc------cceEEEEECCccCcccCc-------ch----HHHHHHHhccc--ccchhhcchHHHHhhcc-c-C
Confidence 999999876 799999999998643210 00 11122222211 10111112211100111 2 2
Q ss_pred CeEEEEEeCCCccchh---HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 260 ARVLVFVAEKDKLAAR---GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~~---~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
||+++.+|+.|.+++. +..+.++|+++|+ ++++.+++|++|+|..+ ...+.+.+.|+.++
T Consensus 212 ~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~--~v~~~~~~g~~H~f~~~-------~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 212 STILIDQGTADQFLDEQLRPDAFEQACRAAGQ--ALTLRRQAGYDHSYYFI-------ASFIADHLRHHAER 274 (275)
T ss_pred CCeeEeecCCCcccCccccHHHHHHHHHHcCC--CeEEEEeCCCCccchhH-------HHhHHHHHHHHHhh
Confidence 4999999999998874 5789999999998 99999999999999855 46677777887765
No 15
>PLN02442 S-formylglutathione hydrolase
Probab=99.85 E-value=6.1e-20 Score=161.15 Aligned_cols=234 Identities=15% Similarity=0.122 Sum_probs=142.1
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP 127 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~ 127 (331)
..+++.+. --+..+.+.+|+|+.. ..++.|+|+++||++. +........-+..++...|++|+.||....+
T Consensus 19 ~~~~~~s~--~l~~~~~~~vy~P~~~----~~~~~Pvv~~lHG~~~---~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g 89 (283)
T PLN02442 19 RRYKHFSS--TLGCSMTFSVYFPPAS----DSGKVPVLYWLSGLTC---TDENFIQKSGAQRAAAARGIALVAPDTSPRG 89 (283)
T ss_pred EEEEEecc--ccCCceEEEEEcCCcc----cCCCCCEEEEecCCCc---ChHHHHHhhhHHHHHhhcCeEEEecCCCCCC
Confidence 44444442 2356899999999843 3468999999998553 2221111122235556679999999975322
Q ss_pred -----CC---------C-C-----C-----ChHHH-HHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHH
Q 042745 128 -----EN---------P-V-----P-----CAHDD-SWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHH 181 (331)
Q Consensus 128 -----~~---------~-~-----~-----~~~~d-~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~ 181 (331)
.. . + + ..... .....+++..... .+|.++++|+|+||||++|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~----------~~~~~~~~i~G~S~GG~~a~~ 159 (283)
T PLN02442 90 LNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD----------QLDTSRASIFGHSMGGHGALT 159 (283)
T ss_pred CCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH----------hcCCCceEEEEEChhHHHHHH
Confidence 00 0 0 0 00111 1222333333221 167899999999999999999
Q ss_pred HHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCC-CCCCCCCCCCCCCCcccCCCC
Q 042745 182 MGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNG-CDDPWINPCVEGSSLASMGCA 260 (331)
Q Consensus 182 ~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~ 260 (331)
++.++++ .++++++++|.++..... . ........ .+..... ......+++. .+.....
T Consensus 160 ~a~~~p~------~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~----~g~~~~~~~~~d~~~~~~---~~~~~~~- 218 (283)
T PLN02442 160 IYLKNPD------KYKSVSAFAPIANPINCP--W-----GQKAFTNY----LGSDKADWEEYDATELVS---KFNDVSA- 218 (283)
T ss_pred HHHhCch------hEEEEEEECCccCcccCc--h-----hhHHHHHH----cCCChhhHHHcChhhhhh---hccccCC-
Confidence 9998865 799999999987643110 0 01111111 1111000 0001112211 2223344
Q ss_pred eEEEEEeCCCccchh---HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 261 RVLVFVAEKDKLAAR---GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 261 Pvli~~G~~D~~v~~---~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
|+++++|++|.+++. ++.+++.+++.|. ++++++++|++|.|..+ ..++++.+.|..++++
T Consensus 219 pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~--~~~~~~~pg~~H~~~~~-------~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 219 TILIDQGEADKFLKEQLLPENFEEACKEAGA--PVTLRLQPGYDHSYFFI-------ATFIDDHINHHAQALK 282 (283)
T ss_pred CEEEEECCCCccccccccHHHHHHHHHHcCC--CeEEEEeCCCCccHHHH-------HHHHHHHHHHHHHHhc
Confidence 999999999998873 6889999999998 89999999999987632 4566666677766654
No 16
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=2.6e-19 Score=152.10 Aligned_cols=207 Identities=18% Similarity=0.175 Sum_probs=158.9
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCC--
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRR-- 125 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~-- 125 (331)
++++|++. +..+.+.+.+|+.. ++.|+||++|+ +.|-.. .....+++++.+ ||.|++||.-.
T Consensus 3 ~~v~~~~~----~~~~~~~~a~P~~~------~~~P~VIv~he---i~Gl~~--~i~~~a~rlA~~-Gy~v~~Pdl~~~~ 66 (236)
T COG0412 3 TDVTIPAP----DGELPAYLARPAGA------GGFPGVIVLHE---IFGLNP--HIRDVARRLAKA-GYVVLAPDLYGRQ 66 (236)
T ss_pred cceEeeCC----CceEeEEEecCCcC------CCCCEEEEEec---ccCCch--HHHHHHHHHHhC-CcEEEechhhccC
Confidence 56778764 57899999999997 44499999998 333332 266788888755 99999999542
Q ss_pred CCC-----------------CCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 126 APE-----------------NPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 126 ~~~-----------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
.+. .+......|+.++++||.++.. .+.++|+++|+|+||.+|+.++.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~-----------~~~~~ig~~GfC~GG~~a~~~a~~~~- 134 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQ-----------VDPKRIGVVGFCMGGGLALLAATRAP- 134 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCC-----------CCCceEEEEEEcccHHHHHHhhcccC-
Confidence 110 1113456899999999998753 78899999999999999999998875
Q ss_pred cccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeC
Q 042745 189 EILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAE 268 (331)
Q Consensus 189 ~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~ 268 (331)
.+++.+.++|....... . ...++++ |+|+.+|+
T Consensus 135 ------~v~a~v~fyg~~~~~~~-----------------------------~-----------~~~~~~~-pvl~~~~~ 167 (236)
T COG0412 135 ------EVKAAVAFYGGLIADDT-----------------------------A-----------DAPKIKV-PVLLHLAG 167 (236)
T ss_pred ------CccEEEEecCCCCCCcc-----------------------------c-----------ccccccC-cEEEEecc
Confidence 59999999876632111 0 1123444 99999999
Q ss_pred CCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeec------CCCcHHHHHHHHHHHHHhhccCCC
Q 042745 269 KDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLF------NPNSENARVMLQQIASFFNLQDKP 331 (331)
Q Consensus 269 ~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~------~~~~~~~~~~~~~i~~fl~~~~~~ 331 (331)
.|..++ ....+.+++.++++ .+++.+|+++.|+|... ......+++.++++.+||++++.+
T Consensus 168 ~D~~~p~~~~~~~~~~~~~~~~--~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~~ 236 (236)
T COG0412 168 EDPYIPAADVDALAAALEDAGV--KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLGA 236 (236)
T ss_pred cCCCCChhHHHHHHHHHHhcCC--CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhccC
Confidence 999887 46778899999987 89999999999999854 233467899999999999998753
No 17
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.7e-21 Score=153.13 Aligned_cols=203 Identities=15% Similarity=0.194 Sum_probs=153.6
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
..+.+++.|.. ++...+++|.|... .|+.||+|||.|..|++.. ....+ .-+.+.||+|++++|
T Consensus 42 i~r~e~l~Yg~-----~g~q~VDIwg~~~~--------~klfIfIHGGYW~~g~rk~--clsiv-~~a~~~gY~vasvgY 105 (270)
T KOG4627|consen 42 IIRVEHLRYGE-----GGRQLVDIWGSTNQ--------AKLFIFIHGGYWQEGDRKM--CLSIV-GPAVRRGYRVASVGY 105 (270)
T ss_pred ccchhccccCC-----CCceEEEEecCCCC--------ccEEEEEecchhhcCchhc--ccchh-hhhhhcCeEEEEecc
Confidence 45678999987 66899999999654 6899999999999999875 23333 445677999999999
Q ss_pred CCCCCC-CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe
Q 042745 124 RRAPEN-PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV 202 (331)
Q Consensus 124 r~~~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~ 202 (331)
.++++. .....+.|+...++|+.+.. -+.+++.+.|||+|+++|+++.++..+ ++|.|+++.
T Consensus 106 ~l~~q~htL~qt~~~~~~gv~filk~~------------~n~k~l~~gGHSaGAHLa~qav~R~r~-----prI~gl~l~ 168 (270)
T KOG4627|consen 106 NLCPQVHTLEQTMTQFTHGVNFILKYT------------ENTKVLTFGGHSAGAHLAAQAVMRQRS-----PRIWGLILL 168 (270)
T ss_pred CcCcccccHHHHHHHHHHHHHHHHHhc------------ccceeEEEcccchHHHHHHHHHHHhcC-----chHHHHHHH
Confidence 999986 67788899999999999874 456789999999999999998888654 489999999
Q ss_pred cccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCC--ccchhHHHHH
Q 042745 203 HPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKD--KLAARGWLYY 280 (331)
Q Consensus 203 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D--~~v~~~~~~~ 280 (331)
++.++..+....+..... +. .....+..|+-.. .+..++. |+|++.|.+| .+..+++.|+
T Consensus 169 ~GvY~l~EL~~te~g~dl--------------gL-t~~~ae~~Scdl~--~~~~v~~-~ilVv~~~~espklieQnrdf~ 230 (270)
T KOG4627|consen 169 CGVYDLRELSNTESGNDL--------------GL-TERNAESVSCDLW--EYTDVTV-WILVVAAEHESPKLIEQNRDFA 230 (270)
T ss_pred hhHhhHHHHhCCcccccc--------------Cc-ccchhhhcCccHH--HhcCcee-eeeEeeecccCcHHHHhhhhHH
Confidence 999876554333221110 00 1222233444332 4555666 9999999999 5567999999
Q ss_pred HHHHhcCCCcceEEEEeCCCcee
Q 042745 281 EKLKESGWKGRAEIVETKGESHV 303 (331)
Q Consensus 281 ~~l~~~g~~~~~~~~~~~g~~H~ 303 (331)
..++++ .+..+++.+|.
T Consensus 231 ~q~~~a------~~~~f~n~~hy 247 (270)
T KOG4627|consen 231 DQLRKA------SFTLFKNYDHY 247 (270)
T ss_pred HHhhhc------ceeecCCcchh
Confidence 988775 56788998893
No 18
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.85 E-value=3.6e-20 Score=156.79 Aligned_cols=195 Identities=20% Similarity=0.186 Sum_probs=132.4
Q ss_pred eEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-CC-----------
Q 042745 63 LSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-NP----------- 130 (331)
Q Consensus 63 ~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-~~----------- 130 (331)
+.++++.|++. ++.|.||++|+- .|-. .....++..++.+ ||.|++||+-.... ..
T Consensus 1 ~~ay~~~P~~~------~~~~~Vvv~~d~---~G~~--~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~ 68 (218)
T PF01738_consen 1 IDAYVARPEGG------GPRPAVVVIHDI---FGLN--PNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMR 68 (218)
T ss_dssp EEEEEEEETTS------SSEEEEEEE-BT---TBS---HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHH
T ss_pred CeEEEEeCCCC------CCCCEEEEEcCC---CCCc--hHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHH
Confidence 45778888775 689999999983 3332 2245667777654 99999999753322 00
Q ss_pred ------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 131 ------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 131 ------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
......|+.+++++|++... .+.++|+++|+|+||.+|+.++.+.. .+++++.++|
T Consensus 69 ~~~~~~~~~~~~~~~aa~~~l~~~~~-----------~~~~kig~vGfc~GG~~a~~~a~~~~-------~~~a~v~~yg 130 (218)
T PF01738_consen 69 ELFAPRPEQVAADLQAAVDYLRAQPE-----------VDPGKIGVVGFCWGGKLALLLAARDP-------RVDAAVSFYG 130 (218)
T ss_dssp HCHHHSHHHHHHHHHHHHHHHHCTTT-----------CEEEEEEEEEETHHHHHHHHHHCCTT-------TSSEEEEES-
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhccc-----------cCCCcEEEEEEecchHHhhhhhhhcc-------ccceEEEEcC
Confidence 01234677788899988743 67799999999999999999987762 6999999988
Q ss_pred cccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHH
Q 042745 205 YFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEK 282 (331)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~ 282 (331)
.... ..+.. ...++++ |+++++|+.|+.++ ....+.+.
T Consensus 131 ~~~~------------------------------------~~~~~---~~~~~~~-P~l~~~g~~D~~~~~~~~~~~~~~ 170 (218)
T PF01738_consen 131 GSPP------------------------------------PPPLE---DAPKIKA-PVLILFGENDPFFPPEEVEALEEA 170 (218)
T ss_dssp SSSG------------------------------------GGHHH---HGGG--S--EEEEEETT-TTS-HHHHHHHHHH
T ss_pred CCCC------------------------------------Ccchh---hhcccCC-CEeecCccCCCCCChHHHHHHHHH
Confidence 1000 00000 2233444 99999999999887 35688999
Q ss_pred HHhcCCCcceEEEEeCCCceeeeecCCC---cHHHHHHHHHHHHHhhccC
Q 042745 283 LKESGWKGRAEIVETKGESHVFHLFNPN---SENARVMLQQIASFFNLQD 329 (331)
Q Consensus 283 l~~~g~~~~~~~~~~~g~~H~~~~~~~~---~~~~~~~~~~i~~fl~~~~ 329 (331)
|++.+. ++++++|+|+.|+|...... ...+++.++++++||+++|
T Consensus 171 l~~~~~--~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 171 LKAAGV--DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHCTTT--TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHhcCC--cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 999987 99999999999999865422 3578999999999999986
No 19
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.85 E-value=1.9e-19 Score=165.64 Aligned_cols=237 Identities=13% Similarity=0.110 Sum_probs=142.3
Q ss_pred ccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCC
Q 042745 46 DSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRR 125 (331)
Q Consensus 46 ~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~ 125 (331)
..+.|+++. .++..+.+.++.|+.. ++.|+||+.||.+ +... ..+..+...++ +.||+|+.+|+|+
T Consensus 167 ~~e~v~i~~---~~g~~l~g~l~~P~~~------~~~P~Vli~gG~~---~~~~-~~~~~~~~~La-~~Gy~vl~~D~pG 232 (414)
T PRK05077 167 ELKELEFPI---PGGGPITGFLHLPKGD------GPFPTVLVCGGLD---SLQT-DYYRLFRDYLA-PRGIAMLTIDMPS 232 (414)
T ss_pred ceEEEEEEc---CCCcEEEEEEEECCCC------CCccEEEEeCCcc---cchh-hhHHHHHHHHH-hCCCEEEEECCCC
Confidence 457888876 3355799999999843 5788888766632 2211 12445555565 5599999999998
Q ss_pred CCCCCC----CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEE
Q 042745 126 APENPV----PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVL 201 (331)
Q Consensus 126 ~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~ 201 (331)
.+.... .........+++|+.+... +|.+||+++|+|+||++|+.+|...++ +++++|+
T Consensus 233 ~G~s~~~~~~~d~~~~~~avld~l~~~~~-----------vd~~ri~l~G~S~GG~~Al~~A~~~p~------ri~a~V~ 295 (414)
T PRK05077 233 VGFSSKWKLTQDSSLLHQAVLNALPNVPW-----------VDHTRVAAFGFRFGANVAVRLAYLEPP------RLKAVAC 295 (414)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHhCcc-----------cCcccEEEEEEChHHHHHHHHHHhCCc------CceEEEE
Confidence 775432 1222233567888877642 788999999999999999999987653 7999999
Q ss_pred ecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCC-----CCCCCCCCCCCCCCc-ccCCCCeEEEEEeCCCccchh
Q 042745 202 VHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNG-----CDDPWINPCVEGSSL-ASMGCARVLVFVAEKDKLAAR 275 (331)
Q Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l-~~~~~~Pvli~~G~~D~~v~~ 275 (331)
++|........... ...........+....+..... ......+. .....+ .++++ |+|+++|++|.++|.
T Consensus 296 ~~~~~~~~~~~~~~--~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl-~~~~~l~~~i~~-PvLiI~G~~D~ivP~ 371 (414)
T PRK05077 296 LGPVVHTLLTDPKR--QQQVPEMYLDVLASRLGMHDASDEALRVELNRYSL-KVQGLLGRRCPT-PMLSGYWKNDPFSPE 371 (414)
T ss_pred ECCccchhhcchhh--hhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccc-hhhhhhccCCCC-cEEEEecCCCCCCCH
Confidence 99876421110000 0000001111111111100000 00000010 000012 34566 999999999999973
Q ss_pred HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 276 GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 276 ~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
.. .+.+.+... +.+++++++..| + +...+++..+.+||++++
T Consensus 372 ~~--a~~l~~~~~--~~~l~~i~~~~~-~-------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 372 ED--SRLIASSSA--DGKLLEIPFKPV-Y-------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred HH--HHHHHHhCC--CCeEEEccCCCc-c-------CCHHHHHHHHHHHHHHHh
Confidence 32 223334333 578999998632 2 345889999999999875
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.84 E-value=1.4e-19 Score=162.66 Aligned_cols=232 Identities=16% Similarity=0.099 Sum_probs=139.3
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC--------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV-------- 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~-------- 131 (331)
+..+....+.|.. +.++||++||.+ ++... |..++..++ +.||.|+.+|+|+++....
T Consensus 40 g~~l~~~~~~~~~--------~~~~vll~HG~~---~~~~~--y~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~ 105 (330)
T PRK10749 40 DIPIRFVRFRAPH--------HDRVVVICPGRI---ESYVK--YAELAYDLF-HLGYDVLIIDHRGQGRSGRLLDDPHRG 105 (330)
T ss_pred CCEEEEEEccCCC--------CCcEEEEECCcc---chHHH--HHHHHHHHH-HCCCeEEEEcCCCCCCCCCCCCCCCcC
Confidence 5567777776542 357899999943 22222 556666666 4599999999999876431
Q ss_pred -----CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 132 -----PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 132 -----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
...++|+...++.+... .+..++.|+||||||.+|+.++.+.++ .++++|+.+|..
T Consensus 106 ~~~~~~~~~~d~~~~~~~~~~~-------------~~~~~~~l~GhSmGG~ia~~~a~~~p~------~v~~lvl~~p~~ 166 (330)
T PRK10749 106 HVERFNDYVDDLAAFWQQEIQP-------------GPYRKRYALAHSMGGAILTLFLQRHPG------VFDAIALCAPMF 166 (330)
T ss_pred ccccHHHHHHHHHHHHHHHHhc-------------CCCCCeEEEEEcHHHHHHHHHHHhCCC------CcceEEEECchh
Confidence 12334555555544332 345789999999999999999988765 799999999976
Q ss_pred cCCCCCCCCc--------------------------cCc-----h--hhhHHHHHHHhhccCCCCCCC-CCCC---CCC-
Q 042745 207 WGSTPVGNET--------------------------TDA-----K--HRAFFDGIWRMGYRSETNGCD-DPWI---NPC- 248 (331)
Q Consensus 207 ~~~~~~~~~~--------------------------~~~-----~--~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~- 248 (331)
.......... ... . ...........+.... .... .... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (330)
T PRK10749 167 GIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDP-ELRVGGPTYHWVRESI 245 (330)
T ss_pred ccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCC-CcccCCCcHHHHHHHH
Confidence 4321111000 000 0 0000011111111000 0000 0000 000
Q ss_pred CC----CCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCC-CcceEEEEeCCCceeeeecCCCcHHHHHHHHHH
Q 042745 249 VE----GSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGW-KGRAEIVETKGESHVFHLFNPNSENARVMLQQI 321 (331)
Q Consensus 249 ~~----~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~-~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i 321 (331)
.. ...+.+++. |+|+++|++|.+++ .++.+++.+++++. ..++++++++|++|......+ ...++++++|
T Consensus 246 ~~~~~~~~~~~~i~~-P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~--~~r~~v~~~i 322 (330)
T PRK10749 246 LAGEQVLAGAGDITT-PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD--AMRSVALNAI 322 (330)
T ss_pred HHHHHHHhhccCCCC-CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc--HHHHHHHHHH
Confidence 00 013455666 99999999999987 56678888876542 115689999999997663321 2357899999
Q ss_pred HHHhhcc
Q 042745 322 ASFFNLQ 328 (331)
Q Consensus 322 ~~fl~~~ 328 (331)
.+||+++
T Consensus 323 ~~fl~~~ 329 (330)
T PRK10749 323 VDFFNRH 329 (330)
T ss_pred HHHHhhc
Confidence 9999875
No 21
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.84 E-value=5.5e-19 Score=156.00 Aligned_cols=220 Identities=18% Similarity=0.203 Sum_probs=145.2
Q ss_pred eEEEEee-cCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHH---HHHHhcCCeEEEEecCCCCC----CCCCCCh
Q 042745 63 LSARLYL-PKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYL---NALVSACNVVAVSVDYRRAP----ENPVPCA 134 (331)
Q Consensus 63 ~~~~~~~-P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~---~~la~~~G~~vv~~dyr~~~----~~~~~~~ 134 (331)
...+++. |.+. .++..|+|||+|||||..+.... ...++ .+++ . ...+++.||.+.+ ++.+|.+
T Consensus 106 ~s~Wlvk~P~~~----~pk~DpVlIYlHGGGY~l~~~p~--qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~~~~yPtQ 177 (374)
T PF10340_consen 106 QSYWLVKAPNRF----KPKSDPVLIYLHGGGYFLGTTPS--QIEFLLNIYKLL-P-EVSILVLDYSLTSSDEHGHKYPTQ 177 (374)
T ss_pred ceEEEEeCCccc----CCCCCcEEEEEcCCeeEecCCHH--HHHHHHHHHHHc-C-CCeEEEEeccccccccCCCcCchH
Confidence 4566776 6553 23567999999999999887643 22222 2222 2 5699999999988 7899999
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCC-
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVG- 213 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~- 213 (331)
+.++.+.+++|.+. ...++|.|+|+|+||++|+.+++....... .+.++.+|++|||........
T Consensus 178 L~qlv~~Y~~Lv~~-------------~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-~~~Pk~~iLISPWv~l~~~~~~ 243 (374)
T PF10340_consen 178 LRQLVATYDYLVES-------------EGNKNIILMGDSAGGNLALSFLQYLKKPNK-LPYPKSAILISPWVNLVPQDSQ 243 (374)
T ss_pred HHHHHHHHHHHHhc-------------cCCCeEEEEecCccHHHHHHHHHHHhhcCC-CCCCceeEEECCCcCCcCCCCC
Confidence 99999999999954 335899999999999999998887654221 236899999999998762111
Q ss_pred --C-----CccCchhhhHHHHHHHhhccCCC---CCCCCCCCCCCC--CCCCcccC--CCCeEEEEEeCCCccchhHHHH
Q 042745 214 --N-----ETTDAKHRAFFDGIWRMGYRSET---NGCDDPWINPCV--EGSSLASM--GCARVLVFVAEKDKLAARGWLY 279 (331)
Q Consensus 214 --~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~l~~~--~~~Pvli~~G~~D~~v~~~~~~ 279 (331)
. ...+.........+...+.+... .....+...+-. ..+.+..+ .+ -++|+.|+++.+.++.+++
T Consensus 244 ~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~-~vfVi~Ge~EvfrddI~~~ 322 (374)
T PF10340_consen 244 EGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKY-SVFVIYGEDEVFRDDILEW 322 (374)
T ss_pred CCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCC-cEEEEECCccccHHHHHHH
Confidence 1 11122233333344444444410 011111111111 01122221 23 7999999999999999999
Q ss_pred HHHHHhcCC---CcceEEEEeCCCceeee
Q 042745 280 YEKLKESGW---KGRAEIVETKGESHVFH 305 (331)
Q Consensus 280 ~~~l~~~g~---~~~~~~~~~~g~~H~~~ 305 (331)
++++.+.+. ....++.+.+++.|.-.
T Consensus 323 ~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 323 AKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred HHHHhhcCccccCCcceEEEecCCccccc
Confidence 999997653 00368888999999654
No 22
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=7e-19 Score=160.68 Aligned_cols=230 Identities=15% Similarity=0.126 Sum_probs=141.0
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC--------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV-------- 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~-------- 131 (331)
+..+....|.|... .++++||++||.+. +.. .|..++..++ +.||.|+.+|+|+++....
T Consensus 120 ~~~l~~~~~~p~~~------~~~~~Vl~lHG~~~---~~~--~~~~~a~~L~-~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 187 (395)
T PLN02652 120 RNALFCRSWAPAAG------EMRGILIIIHGLNE---HSG--RYLHFAKQLT-SCGFGVYAMDWIGHGGSDGLHGYVPSL 187 (395)
T ss_pred CCEEEEEEecCCCC------CCceEEEEECCchH---HHH--HHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCCCcCH
Confidence 56788888888654 35789999999542 221 1556666665 4599999999999875432
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
....+|+..+++++... .+..+++|+||||||.+|+.++.+.... ..++++|+.+|++.....
T Consensus 188 ~~~~~Dl~~~l~~l~~~-------------~~~~~i~lvGhSmGG~ial~~a~~p~~~----~~v~glVL~sP~l~~~~~ 250 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSE-------------NPGVPCFLFGHSTGGAVVLKAASYPSIE----DKLEGIVLTSPALRVKPA 250 (395)
T ss_pred HHHHHHHHHHHHHHHHh-------------CCCCCEEEEEECHHHHHHHHHHhccCcc----cccceEEEECcccccccc
Confidence 23457888888888764 2335799999999999999877532111 269999999998753211
Q ss_pred CCC--------------Cc---cC----chhhhHHHHHHHhhccCCCCCCCCCCCC---CC----C-CCCCcccCCCCeE
Q 042745 212 VGN--------------ET---TD----AKHRAFFDGIWRMGYRSETNGCDDPWIN---PC----V-EGSSLASMGCARV 262 (331)
Q Consensus 212 ~~~--------------~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~~~~l~~~~~~Pv 262 (331)
... .. .. ..... .......+.... ......... .. . ....+.++++ |+
T Consensus 251 ~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~-~~~~~~~~~dp~-~~~g~i~~~~~~~~~~~~~~l~~~L~~I~v-Pv 327 (395)
T PLN02652 251 HPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRD-PAALLAKYSDPL-VYTGPIRVRTGHEILRISSYLTRNFKSVTV-PF 327 (395)
T ss_pred hHHHHHHHHHHHHhCCCCcccCcccccCCcCCC-HHHHHHHhcCCC-cccCCchHHHHHHHHHHHHHHHhhcccCCC-CE
Confidence 000 00 00 00000 000000000000 000000000 00 0 0014566777 99
Q ss_pred EEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 263 LVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 263 li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
|++||++|.+++ .++.+++++... .+++++++++.|..... ++.+++++.+.+||+.++
T Consensus 328 LIi~G~~D~vvp~~~a~~l~~~~~~~----~k~l~~~~ga~H~l~~e----~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 328 MVLHGTADRVTDPLASQDLYNEAASR----HKDIKLYDGFLHDLLFE----PEREEVGRDIIDWMEKRL 388 (395)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCC----CceEEEECCCeEEeccC----CCHHHHHHHHHHHHHHHh
Confidence 999999999986 556666665443 46888999999986532 356889999999999875
No 23
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=8.6e-19 Score=145.16 Aligned_cols=203 Identities=20% Similarity=0.253 Sum_probs=144.7
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC----CChH
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV----PCAH 135 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~----~~~~ 135 (331)
++.+....+.|... ..++++|.||...-.| +...++..+....++.++.+||++.+.... -...
T Consensus 45 gn~~~~~y~~~~~~-------~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 45 GNEIVCMYVRPPEA-------AHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred CCEEEEEEEcCccc-------cceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCCcccccch
Confidence 55666666666543 5799999999643333 134666677777799999999998765322 2567
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCC
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNE 215 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~ 215 (331)
+|+.++++||++.. ...++|+|+|+|+|...++.+|.+. .+.|+|+.+|+++........
T Consensus 113 ~Di~avye~Lr~~~------------g~~~~Iil~G~SiGt~~tv~Lasr~--------~~~alVL~SPf~S~~rv~~~~ 172 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRY------------GSPERIILYGQSIGTVPTVDLASRY--------PLAAVVLHSPFTSGMRVAFPD 172 (258)
T ss_pred hhHHHHHHHHHhhc------------CCCceEEEEEecCCchhhhhHhhcC--------CcceEEEeccchhhhhhhccC
Confidence 89999999999973 1679999999999999999999987 389999999999753321110
Q ss_pred ccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceE
Q 042745 216 TTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAE 293 (331)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~ 293 (331)
. .. . .+.........+..+++ |+||+||++|.+++ .+..+++++++. ++
T Consensus 173 --------------------~-~~-~-~~~d~f~~i~kI~~i~~-PVLiiHgtdDevv~~sHg~~Lye~~k~~-----~e 223 (258)
T KOG1552|consen 173 --------------------T-KT-T-YCFDAFPNIEKISKITC-PVLIIHGTDDEVVDFSHGKALYERCKEK-----VE 223 (258)
T ss_pred --------------------c-ce-E-EeeccccccCcceeccC-CEEEEecccCceecccccHHHHHhcccc-----CC
Confidence 0 00 0 11110000116777888 99999999999997 778888888764 56
Q ss_pred EEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 294 IVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 294 ~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
-....|++|..... ..+.++.+..|+..-.
T Consensus 224 pl~v~g~gH~~~~~------~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 224 PLWVKGAGHNDIEL------YPEYIEHLRRFISSVL 253 (258)
T ss_pred CcEEecCCCccccc------CHHHHHHHHHHHHHhc
Confidence 77788899975533 2567777777776543
No 24
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.80 E-value=3.2e-18 Score=149.80 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=140.8
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCc-ccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGG-FCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA 126 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg-~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~ 126 (331)
+.+.+... +..+.+.++.|.+. . .+.||++|||. +..|+... +..+++.++ +.||.|+.+|++++
T Consensus 3 ~~~~~~~~----~~~l~g~~~~p~~~------~-~~~vv~i~gg~~~~~g~~~~--~~~la~~l~-~~G~~v~~~Dl~G~ 68 (274)
T TIGR03100 3 RALTFSCE----GETLVGVLHIPGAS------H-TTGVLIVVGGPQYRVGSHRQ--FVLLARRLA-EAGFPVLRFDYRGM 68 (274)
T ss_pred eeEEEEcC----CcEEEEEEEcCCCC------C-CCeEEEEeCCccccCCchhH--HHHHHHHHH-HCCCEEEEeCCCCC
Confidence 45667642 67789999998764 2 34566666643 43344322 344556665 45999999999998
Q ss_pred CCCC-----CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEE
Q 042745 127 PENP-----VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVL 201 (331)
Q Consensus 127 ~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~ 201 (331)
+... +....+|+.++++++++.. ...++|+++|||+||.+++.++.... .++++|+
T Consensus 69 G~S~~~~~~~~~~~~d~~~~~~~l~~~~------------~g~~~i~l~G~S~Gg~~a~~~a~~~~-------~v~~lil 129 (274)
T TIGR03100 69 GDSEGENLGFEGIDADIAAAIDAFREAA------------PHLRRIVAWGLCDAASAALLYAPADL-------RVAGLVL 129 (274)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhC------------CCCCcEEEEEECHHHHHHHHHhhhCC-------CccEEEE
Confidence 7542 2234578999999998752 12367999999999999999876532 7999999
Q ss_pred ecccccCCCCCCCCccCch-hh-hHHHHHHHhhccCCCCCC-------------C-CCCCCCCCC---C---CCcccCCC
Q 042745 202 VHPYFWGSTPVGNETTDAK-HR-AFFDGIWRMGYRSETNGC-------------D-DPWINPCVE---G---SSLASMGC 259 (331)
Q Consensus 202 ~~p~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~~---~---~~l~~~~~ 259 (331)
++|++.............. .. .....+|..+.... ... . .....+... . ..+..+++
T Consensus 130 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 208 (274)
T TIGR03100 130 LNPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLSGE-VNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQG 208 (274)
T ss_pred ECCccCCcccchHHHHHHHHHHHHhChHHHHHhcCCC-ccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCC
Confidence 9998653221111000000 00 00002222111110 000 0 000000000 0 03445666
Q ss_pred CeEEEEEeCCCccchhH-------HHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 260 ARVLVFVAEKDKLAARG-------WLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~~~-------~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
|+++++|+.|...+.. ..+.+.+... ++++..+++++|.+. ..+..+++.+.|.+||++
T Consensus 209 -P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~----~v~~~~~~~~~H~l~----~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 209 -PVLFILSGNDLTAQEFADSVLGEPAWRGALEDP----GIERVEIDGADHTFS----DRVWREWVAARTTEWLRR 274 (274)
T ss_pred -cEEEEEcCcchhHHHHHHHhccChhhHHHhhcC----CeEEEecCCCCcccc----cHHHHHHHHHHHHHHHhC
Confidence 9999999999876422 2222233333 678999999999653 124557899999999963
No 25
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.80 E-value=1.6e-18 Score=138.59 Aligned_cols=228 Identities=14% Similarity=0.157 Sum_probs=159.4
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
.++..+.+++.+ .+.+.++-|.-... .+.|+++|+|+....+|.+ ...+.-+....++.|+.++
T Consensus 50 ~n~pye~i~l~T-----~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmGhr-----~~i~~~fy~~l~mnv~ivs 113 (300)
T KOG4391|consen 50 FNMPYERIELRT-----RDKVTLDAYLMLSE------SSRPTLLYFHANAGNMGHR-----LPIARVFYVNLKMNVLIVS 113 (300)
T ss_pred cCCCceEEEEEc-----CcceeEeeeeeccc------CCCceEEEEccCCCcccch-----hhHHHHHHHHcCceEEEEE
Confidence 567778888888 45566655555454 4799999999987777775 2445556677899999999
Q ss_pred CCCCCCCCC---C-ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeE
Q 042745 123 YRRAPENPV---P-CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAG 198 (331)
Q Consensus 123 yr~~~~~~~---~-~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~ 198 (331)
||+.+.... + ...-|..++++||.++.. .|..+|+|+|.|.||..|..+|.+..+ ++.+
T Consensus 114 YRGYG~S~GspsE~GL~lDs~avldyl~t~~~-----------~dktkivlfGrSlGGAvai~lask~~~------ri~~ 176 (300)
T KOG4391|consen 114 YRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPD-----------LDKTKIVLFGRSLGGAVAIHLASKNSD------RISA 176 (300)
T ss_pred eeccccCCCCccccceeccHHHHHHHHhcCcc-----------CCcceEEEEecccCCeeEEEeeccchh------heee
Confidence 998765432 2 234699999999999875 788999999999999999999998876 7999
Q ss_pred EEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hH
Q 042745 199 IVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RG 276 (331)
Q Consensus 199 ~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~ 276 (331)
+|+.+.+++........... ... .+...++-. ..+.|.- .+..-.. |.|++.|.+|.+|| ..
T Consensus 177 ~ivENTF~SIp~~~i~~v~p-~~~----k~i~~lc~k------n~~~S~~----ki~~~~~-P~LFiSGlkDelVPP~~M 240 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPLVFP-FPM----KYIPLLCYK------NKWLSYR----KIGQCRM-PFLFISGLKDELVPPVMM 240 (300)
T ss_pred eeeechhccchhhhhheecc-chh----hHHHHHHHH------hhhcchh----hhccccC-ceEEeecCccccCCcHHH
Confidence 99999988764432221111 010 111111000 0011110 2222223 99999999999997 67
Q ss_pred HHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 277 WLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 277 ~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
+.+++.+.+. ..++.++|++.|.-...- +-.++.|.+||.+..
T Consensus 241 r~Ly~~c~S~----~Krl~eFP~gtHNDT~i~------dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 241 RQLYELCPSR----TKRLAEFPDGTHNDTWIC------DGYFQAIEDFLAEVV 283 (300)
T ss_pred HHHHHhCchh----hhhheeCCCCccCceEEe------ccHHHHHHHHHHHhc
Confidence 7888888777 458999999999755332 447788888888754
No 26
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.79 E-value=1.1e-18 Score=156.71 Aligned_cols=179 Identities=25% Similarity=0.349 Sum_probs=132.2
Q ss_pred eeeeecceEEEeecCcEEEeccCCCCCCCC-----------CCCCCcc----cceeeecC--------CCCCCCCceEEE
Q 042745 10 IAYEFSPLIRVYKDGRVERFVGNDTVPPSF-----------DPKTNVD----SKDVVYSP--------QNSNNSNALSAR 66 (331)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-----------~~~~~v~----~~~v~~~~--------~~~~~~~~~~~~ 66 (331)
+++.-.+.+.+...+.+.+|++++++.|+. .+..++. ...+...+ ..+.+.+++.++
T Consensus 4 ~~~t~~G~~~g~~~~~v~~w~GIpYA~pPvG~~Rfr~p~~~~~w~~~rda~~~gp~~~Q~~~~~~~~~~~~~sEDCL~LN 83 (491)
T COG2272 4 VAETTTGKVEGITVNGVHSWLGIPYAAPPVGELRFRRPVPPEPWSGVRDATQFGPACPQPFNRMGSGEDFTGSEDCLYLN 83 (491)
T ss_pred eeecccceeecccccceeEEeecccCCCCCCcccccCCCCCcCCCcccchhccCCCCCCccccccccccCCccccceeEE
Confidence 455666889999999999999999865442 1111111 00000000 113447899999
Q ss_pred EeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-------C------CCCC
Q 042745 67 LYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-------N------PVPC 133 (331)
Q Consensus 67 ~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-------~------~~~~ 133 (331)
||.|... .++.|+|||||||+|.+|+...+.|.. ..|+++.+++||++|||+..- . .-..
T Consensus 84 IwaP~~~-----a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 84 IWAPEVP-----AEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred eeccCCC-----CCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 9999922 367999999999999999998755554 567766459999999998632 0 1124
Q ss_pred hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 134 AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 134 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
.+.|...+++|++++.+.|| .|++||.|+|+|+||+.++.++....-.+ .++.+|+.||...
T Consensus 157 Gl~DqilALkWV~~NIe~FG--------GDp~NVTl~GeSAGa~si~~Lla~P~AkG----LF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFG--------GDPQNVTLFGESAGAASILTLLAVPSAKG----LFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhC--------CCccceEEeeccchHHHHHHhhcCccchH----HHHHHHHhCCCCC
Confidence 68999999999999999999 99999999999999999998877654433 5888888888764
No 27
>PLN00021 chlorophyllase
Probab=99.79 E-value=4.3e-17 Score=144.11 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=138.0
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHH
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSW 139 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~ 139 (331)
...+++.+|+|... ++.|+|||+||+++. ... |...+..++ +.||.|+++|+++.........++|+.
T Consensus 36 ~~~~p~~v~~P~~~------g~~PvVv~lHG~~~~---~~~--y~~l~~~La-s~G~~VvapD~~g~~~~~~~~~i~d~~ 103 (313)
T PLN00021 36 SPPKPLLVATPSEA------GTYPVLLFLHGYLLY---NSF--YSQLLQHIA-SHGFIVVAPQLYTLAGPDGTDEIKDAA 103 (313)
T ss_pred CCCceEEEEeCCCC------CCCCEEEEECCCCCC---ccc--HHHHHHHHH-hCCCEEEEecCCCcCCCCchhhHHHHH
Confidence 35799999999765 678999999997653 222 566667776 459999999977543233445678888
Q ss_pred HHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCc
Q 042745 140 AAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDA 219 (331)
Q Consensus 140 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~ 219 (331)
++++|+.+....+..+ ....|.++++|+|||+||.+|+.++.+.++... ...++++|++.|+........
T Consensus 104 ~~~~~l~~~l~~~l~~---~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~-~~~v~ali~ldPv~g~~~~~~------ 173 (313)
T PLN00021 104 AVINWLSSGLAAVLPE---GVRPDLSKLALAGHSRGGKTAFALALGKAAVSL-PLKFSALIGLDPVDGTSKGKQ------ 173 (313)
T ss_pred HHHHHHHhhhhhhccc---ccccChhheEEEEECcchHHHHHHHhhcccccc-ccceeeEEeeccccccccccC------
Confidence 8999998754321100 012677899999999999999999988765322 136899999999864321100
Q ss_pred hhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCc-----cc----h---hHHHHHHHHHhcC
Q 042745 220 KHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDK-----LA----A---RGWLYYEKLKESG 287 (331)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~-----~v----~---~~~~~~~~l~~~g 287 (331)
..+.+-.... ...++.. |+||++++.|. ++ + ...+|++.++.
T Consensus 174 ---------------------~~p~il~~~~--~s~~~~~-P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~-- 227 (313)
T PLN00021 174 ---------------------TPPPVLTYAP--HSFNLDI-PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA-- 227 (313)
T ss_pred ---------------------CCCcccccCc--ccccCCC-CeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC--
Confidence 0000000000 1111334 99999999763 22 2 22455554433
Q ss_pred CCcceEEEEeCCCceeeeecCC------------------CcHHHHHHHHHHHHHhhccC
Q 042745 288 WKGRAEIVETKGESHVFHLFNP------------------NSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 288 ~~~~~~~~~~~g~~H~~~~~~~------------------~~~~~~~~~~~i~~fl~~~~ 329 (331)
++.+.+.++++|.-...+. ..+..+.+...+.+||+..+
T Consensus 228 ---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l 284 (313)
T PLN00021 228 ---PAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYL 284 (313)
T ss_pred ---CeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 5678888999997553322 01223344446778887654
No 28
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.78 E-value=3.1e-18 Score=154.42 Aligned_cols=113 Identities=32% Similarity=0.503 Sum_probs=97.7
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
.++-+|+.+|||||+..+.+. +-.+++.|+...|+-|+++||.++|+++||..++.+.-++-|+..+.+.+|
T Consensus 394 ~S~sli~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG------ 465 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLG------ 465 (880)
T ss_pred CCceEEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhC------
Confidence 466799999999999888766 678899999999999999999999999999999999999999999998887
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
--.+||++.|+|+||++..-++++.-..++- .+.|+++.++
T Consensus 466 --~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR--vPDGl~laY~ 506 (880)
T KOG4388|consen 466 --STGERIVLAGDSAGGNLCFTVALRAIAYGVR--VPDGLMLAYP 506 (880)
T ss_pred --cccceEEEeccCCCcceeehhHHHHHHhCCC--CCCceEEecC
Confidence 6679999999999999998888876554432 4667777544
No 29
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.78 E-value=1.2e-18 Score=140.33 Aligned_cols=207 Identities=14% Similarity=0.125 Sum_probs=138.2
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-------CCCCChHHHHHHHHHHHHHhccCCCC
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-------NPVPCAHDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-------~~~~~~~~d~~~~~~~l~~~~~~~~~ 154 (331)
...|+++|| +.|+..+ .+++.+.+++.||+|.+|.|++++. ......++|+.+++++|....
T Consensus 15 ~~AVLllHG---FTGt~~D---vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g----- 83 (243)
T COG1647 15 NRAVLLLHG---FTGTPRD---VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG----- 83 (243)
T ss_pred CEEEEEEec---cCCCcHH---HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-----
Confidence 389999998 6777764 4555666678899999999999864 344567899999999999642
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCC-C---------cc-Cchhhh
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGN-E---------TT-DAKHRA 223 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~-~---------~~-~~~~~~ 223 (331)
.+.|.++|.||||-+|+.+|.+. .+++++.+|+.......... + .. .....+
T Consensus 84 ---------y~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e 146 (243)
T COG1647 84 ---------YDEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQE 146 (243)
T ss_pred ---------CCeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHH
Confidence 37899999999999999999998 58899988876642221100 0 00 000111
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCCC--CCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCC
Q 042745 224 FFDGIWRMGYRSETNGCDDPWINPCVE--GSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKG 299 (331)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g 299 (331)
.....+..+.... .. .......+.. ..++..|.. |++++.|.+|..+| .+..+++.+... +.++..|++
T Consensus 147 ~~~~e~~~~~~~~-~~-~~~~~~~~i~~~~~~~~~I~~-pt~vvq~~~D~mv~~~sA~~Iy~~v~s~----~KeL~~~e~ 219 (243)
T COG1647 147 QIDKEMKSYKDTP-MT-TTAQLKKLIKDARRSLDKIYS-PTLVVQGRQDEMVPAESANFIYDHVESD----DKELKWLEG 219 (243)
T ss_pred HHHHHHHHhhcch-HH-HHHHHHHHHHHHHhhhhhccc-chhheecccCCCCCHHHHHHHHHhccCC----cceeEEEcc
Confidence 1111111111000 00 0000000000 005666777 99999999999997 445566666655 569999999
Q ss_pred CceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 300 ESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 300 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
.+|..... .+.+++.+.++.||+.
T Consensus 220 SgHVIt~D----~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 220 SGHVITLD----KERDQVEEDVITFLEK 243 (243)
T ss_pred CCceeecc----hhHHHHHHHHHHHhhC
Confidence 99988743 5778899999999974
No 30
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=4.4e-17 Score=144.82 Aligned_cols=239 Identities=12% Similarity=0.140 Sum_probs=133.8
Q ss_pred cccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC
Q 042745 45 VDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR 124 (331)
Q Consensus 45 v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr 124 (331)
...+.+.++. ++....++++.... ....|+|||+||.+ ++... |...+..|. +.||.|+++|.|
T Consensus 19 ~~~~~~~~~~-----~~~~~~~i~y~~~G-----~~~~~~lvliHG~~---~~~~~--w~~~~~~L~-~~gy~vi~~Dl~ 82 (302)
T PRK00870 19 FAPHYVDVDD-----GDGGPLRMHYVDEG-----PADGPPVLLLHGEP---SWSYL--YRKMIPILA-AAGHRVIAPDLI 82 (302)
T ss_pred CCceeEeecC-----CCCceEEEEEEecC-----CCCCCEEEEECCCC---Cchhh--HHHHHHHHH-hCCCEEEEECCC
Confidence 3557777875 33333344433322 12357899999954 22222 566666664 459999999999
Q ss_pred CCCCCCCC-----ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEE
Q 042745 125 RAPENPVP-----CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGI 199 (331)
Q Consensus 125 ~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~ 199 (331)
+++....+ ..+++..+.+..+.+. .+.+++.|+|||+||.+|+.++.+.++ .++++
T Consensus 83 G~G~S~~~~~~~~~~~~~~a~~l~~~l~~-------------l~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~l 143 (302)
T PRK00870 83 GFGRSDKPTRREDYTYARHVEWMRSWFEQ-------------LDLTDVTLVCQDWGGLIGLRLAAEHPD------RFARL 143 (302)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHHHH-------------cCCCCEEEEEEChHHHHHHHHHHhChh------heeEE
Confidence 98765432 1234433333333332 345689999999999999999998865 79999
Q ss_pred EEecccccCCCCC-C----CCcc----Cc---------------hhhhHHHHHHHhhccCC--CC-CCCCCCC---CC--
Q 042745 200 VLVHPYFWGSTPV-G----NETT----DA---------------KHRAFFDGIWRMGYRSE--TN-GCDDPWI---NP-- 247 (331)
Q Consensus 200 i~~~p~~~~~~~~-~----~~~~----~~---------------~~~~~~~~~~~~~~~~~--~~-~~~~~~~---~~-- 247 (331)
|++++.+...... . .... .. ........ +....... .. ....... .+
T Consensus 144 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T PRK00870 144 VVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAA-YDAPFPDESYKAGARAFPLLVPTSPDD 222 (302)
T ss_pred EEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHH-hhcccCChhhhcchhhhhhcCCCCCCC
Confidence 9998643211100 0 0000 00 00000000 00000000 00 0000000 00
Q ss_pred -CC-CC----CCcccCCCCeEEEEEeCCCccch-hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHH
Q 042745 248 -CV-EG----SSLASMGCARVLVFVAEKDKLAA-RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQ 320 (331)
Q Consensus 248 -~~-~~----~~l~~~~~~Pvli~~G~~D~~v~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 320 (331)
.. .. ..+.++.+ |+++++|++|.+++ ..+.+.+.+.... .+.+.++++++|... .+..+++.+.
T Consensus 223 ~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~-----~e~p~~~~~~ 293 (302)
T PRK00870 223 PAVAANRAAWAVLERWDK-PFLTAFSDSDPITGGGDAILQKRIPGAA---GQPHPTIKGAGHFLQ-----EDSGEELAEA 293 (302)
T ss_pred cchHHHHHHHHhhhcCCC-ceEEEecCCCCcccCchHHHHhhccccc---ccceeeecCCCccch-----hhChHHHHHH
Confidence 00 00 03566777 99999999999887 3344444444321 134788999999755 3556889999
Q ss_pred HHHHhhcc
Q 042745 321 IASFFNLQ 328 (331)
Q Consensus 321 i~~fl~~~ 328 (331)
+.+||+++
T Consensus 294 l~~fl~~~ 301 (302)
T PRK00870 294 VLEFIRAT 301 (302)
T ss_pred HHHHHhcC
Confidence 99999876
No 31
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.3e-17 Score=162.89 Aligned_cols=239 Identities=18% Similarity=0.125 Sum_probs=169.0
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
....+.+.+. +....+.+..|++. ++.++.|+++.+|||......... ....+...++...|++|+.+|+
T Consensus 497 ~~~~~~i~~~------~~~~~~~~~lP~~~---~~~~kyPllv~~yGGP~sq~v~~~-~~~~~~~~~~s~~g~~v~~vd~ 566 (755)
T KOG2100|consen 497 IVEFGKIEID------GITANAILILPPNF---DPSKKYPLLVVVYGGPGSQSVTSK-FSVDWNEVVVSSRGFAVLQVDG 566 (755)
T ss_pred cceeEEEEec------cEEEEEEEecCCCC---CCCCCCCEEEEecCCCCcceeeee-EEecHHHHhhccCCeEEEEEcC
Confidence 3445566662 77888999999998 567799999999998742211111 1224455667788999999999
Q ss_pred CCCCCCC-----------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 124 RRAPENP-----------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 124 r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
|+++... ....++|...+++++.+... +|.+||+|+|+|.||++++.++...+..
T Consensus 567 RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~-----------iD~~ri~i~GwSyGGy~t~~~l~~~~~~--- 632 (755)
T KOG2100|consen 567 RGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPF-----------IDRSRVAIWGWSYGGYLTLKLLESDPGD--- 632 (755)
T ss_pred CCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccc-----------ccHHHeEEeccChHHHHHHHHhhhCcCc---
Confidence 9986532 22467899999999988862 9999999999999999999999888532
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCcc
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKL 272 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~ 272 (331)
.+++.++++|+.+.. ........ +++ ..+.. ........++.. .+..++.|-.|++||+.|..
T Consensus 633 --~fkcgvavaPVtd~~-~yds~~te--------rym--g~p~~-~~~~y~e~~~~~---~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 633 --VFKCGVAVAPVTDWL-YYDSTYTE--------RYM--GLPSE-NDKGYEESSVSS---PANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred --eEEEEEEecceeeee-eecccccH--------hhc--CCCcc-ccchhhhccccc---hhhhhccCCEEEEEcCCcCC
Confidence 688889999999875 22211110 000 01111 111111222322 33444443469999999988
Q ss_pred c--hhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 273 A--ARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 273 v--~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
| .++..+.++|+.+|+ ++++.+||+.+|++.... ........+..||+.+.
T Consensus 696 Vh~q~s~~~~~aL~~~gv--~~~~~vypde~H~is~~~----~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 696 VHFQQSAILIKALQNAGV--PFRLLVYPDENHGISYVE----VISHLYEKLDRFLRDCF 748 (755)
T ss_pred cCHHHHHHHHHHHHHCCC--ceEEEEeCCCCccccccc----chHHHHHHHHHHHHHHc
Confidence 8 488999999999999 899999999999988443 33678889999998554
No 32
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.78 E-value=1.2e-17 Score=146.97 Aligned_cols=237 Identities=16% Similarity=0.116 Sum_probs=142.3
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-----CCC
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-----VPC 133 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-----~~~ 133 (331)
|+..+..+.|.+... +..+||++||.+-..+. |..++..++ ..||.|+..|.|+++... ...
T Consensus 18 d~~~~~~~~~~~~~~-------~~g~Vvl~HG~~Eh~~r-----y~~la~~l~-~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 18 DGTRLRYRTWAAPEP-------PKGVVVLVHGLGEHSGR-----YEELADDLA-ARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred CCceEEEEeecCCCC-------CCcEEEEecCchHHHHH-----HHHHHHHHH-hCCCEEEEecCCCCCCCCCCCcCCch
Confidence 367788888887665 33899999996644322 556666665 559999999999987654 112
Q ss_pred hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC--C
Q 042745 134 AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST--P 211 (331)
Q Consensus 134 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~--~ 211 (331)
.+.|....++.+.+...+. ....+++|+||||||.+|+.++.+... .++++|+.+|++.... .
T Consensus 85 ~f~~~~~dl~~~~~~~~~~---------~~~~p~~l~gHSmGg~Ia~~~~~~~~~------~i~~~vLssP~~~l~~~~~ 149 (298)
T COG2267 85 SFADYVDDLDAFVETIAEP---------DPGLPVFLLGHSMGGLIALLYLARYPP------RIDGLVLSSPALGLGGAIL 149 (298)
T ss_pred hHHHHHHHHHHHHHHHhcc---------CCCCCeEEEEeCcHHHHHHHHHHhCCc------cccEEEEECccccCChhHH
Confidence 2444444444444432210 123789999999999999999998863 8999999999987652 0
Q ss_pred C---------------CCCccCc--------hhhhHHHHHHHhhccCCCCCCCCC----C-------CC-CCCCCCCccc
Q 042745 212 V---------------GNETTDA--------KHRAFFDGIWRMGYRSETNGCDDP----W-------IN-PCVEGSSLAS 256 (331)
Q Consensus 212 ~---------------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~-~~~~~~~l~~ 256 (331)
. +...... ............+.... ...... + .. +... .-..
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP-~~~~~~~~~~w~~~~~~a~~~~~~~--~~~~ 226 (298)
T COG2267 150 RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADP-LIGVGGPVSRWVDLALLAGRVPALR--DAPA 226 (298)
T ss_pred HHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCC-ccccCCccHHHHHHHHHhhcccchh--cccc
Confidence 0 0000000 00000001111110000 000000 0 00 0000 1233
Q ss_pred CCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 257 MGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 257 ~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
+.. |+||++|++|.+++......+..+..+.+ ++++.+|+|+.|...+.. .... +++++++.+||.++.+
T Consensus 227 ~~~-PvLll~g~~D~vv~~~~~~~~~~~~~~~~-~~~~~~~~g~~He~~~E~-~~~r-~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 227 IAL-PVLLLQGGDDRVVDNVEGLARFFERAGSP-DKELKVIPGAYHELLNEP-DRAR-EEVLKDILAWLAEALP 296 (298)
T ss_pred ccC-CEEEEecCCCccccCcHHHHHHHHhcCCC-CceEEecCCcchhhhcCc-chHH-HHHHHHHHHHHHhhcc
Confidence 445 99999999998886333444555555542 579999999999766332 1112 8999999999998764
No 33
>PRK11460 putative hydrolase; Provisional
Probab=99.77 E-value=2.5e-17 Score=140.38 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=83.1
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCD 241 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
++.++|+|+|+|+||.+|+.++.+.+. .+.+++++++.+... + .
T Consensus 100 ~~~~~i~l~GfS~Gg~~al~~a~~~~~------~~~~vv~~sg~~~~~------------------------~---~--- 143 (232)
T PRK11460 100 VGASATALIGFSQGAIMALEAVKAEPG------LAGRVIAFSGRYASL------------------------P---E--- 143 (232)
T ss_pred CChhhEEEEEECHHHHHHHHHHHhCCC------cceEEEEeccccccc------------------------c---c---
Confidence 788999999999999999998877653 567777777643100 0 0
Q ss_pred CCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 242 DPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 242 ~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
.+ . .+. |++++||++|.+++ .++.++++|++.+. ++++++|++++|.+. .+.++
T Consensus 144 ----~~-----~---~~~-pvli~hG~~D~vvp~~~~~~~~~~L~~~g~--~~~~~~~~~~gH~i~---------~~~~~ 199 (232)
T PRK11460 144 ----TA-----P---TAT-TIHLIHGGEDPVIDVAHAVAAQEALISLGG--DVTLDIVEDLGHAID---------PRLMQ 199 (232)
T ss_pred ----cc-----c---CCC-cEEEEecCCCCccCHHHHHHHHHHHHHCCC--CeEEEEECCCCCCCC---------HHHHH
Confidence 00 0 112 99999999999997 67889999999987 899999999999876 56677
Q ss_pred HHHHHhhccC
Q 042745 320 QIASFFNLQD 329 (331)
Q Consensus 320 ~i~~fl~~~~ 329 (331)
.+.+||.+.+
T Consensus 200 ~~~~~l~~~l 209 (232)
T PRK11460 200 FALDRLRYTV 209 (232)
T ss_pred HHHHHHHHHc
Confidence 7777777655
No 34
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=9.6e-17 Score=142.09 Aligned_cols=210 Identities=17% Similarity=0.167 Sum_probs=124.5
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----------ChHHHHHHHHHHHHHhccC
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP----------CAHDDSWAAIKWVASHVNG 151 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~----------~~~~d~~~~~~~l~~~~~~ 151 (331)
.|+||++||.+. +... |...+..++.+ +.|+++|+++++....+ ..++|....+.-+.+.
T Consensus 29 ~~~vlllHG~~~---~~~~--w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~--- 98 (294)
T PLN02824 29 GPALVLVHGFGG---NADH--WRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD--- 98 (294)
T ss_pred CCeEEEECCCCC---ChhH--HHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH---
Confidence 378999999543 3222 66667777543 69999999998765432 2344544444433333
Q ss_pred CCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCC-CCccCch---h------
Q 042745 152 SGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVG-NETTDAK---H------ 221 (331)
Q Consensus 152 ~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~-~~~~~~~---~------ 221 (331)
...+++.|+||||||.+|+.+|.+.++ +|+++|+++|......... ....... .
T Consensus 99 ----------l~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 99 ----------VVGDPAFVICNSVGGVVGLQAAVDAPE------LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred ----------hcCCCeEEEEeCHHHHHHHHHHHhChh------heeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 334789999999999999999999876 7999999987542211000 0000000 0
Q ss_pred -------------hhHHHHHHHhhccCCCCCCCC------------C--------CC--CCC-CCCCCcccCCCCeEEEE
Q 042745 222 -------------RAFFDGIWRMGYRSETNGCDD------------P--------WI--NPC-VEGSSLASMGCARVLVF 265 (331)
Q Consensus 222 -------------~~~~~~~~~~~~~~~~~~~~~------------~--------~~--~~~-~~~~~l~~~~~~Pvli~ 265 (331)
.......+...+... ..... + .. ... .....+.++++ |++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi 240 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDD-SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKC-PVLIA 240 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccCh-hhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCC-CeEEE
Confidence 000011111001100 00000 0 00 000 00014667777 99999
Q ss_pred EeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 266 VAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 266 ~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+|++|..++.. ..+++.+... ..+++++++++|... .+..+++.+.+.+||+++
T Consensus 241 ~G~~D~~~~~~--~~~~~~~~~~--~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 241 WGEKDPWEPVE--LGRAYANFDA--VEDFIVLPGVGHCPQ-----DEAPELVNPLIESFVARH 294 (294)
T ss_pred EecCCCCCChH--HHHHHHhcCC--ccceEEeCCCCCChh-----hhCHHHHHHHHHHHHhcC
Confidence 99999988632 2334444432 578999999999655 456689999999999875
No 35
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=1e-17 Score=141.05 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=112.7
Q ss_pred EEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-------------CCC
Q 042745 66 RLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-------------PVP 132 (331)
Q Consensus 66 ~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-------------~~~ 132 (331)
++|.|++. .++.|+||++||+++...+... ...+..++.+.|+.|+.||++++... ...
T Consensus 2 ~ly~P~~~-----~~~~P~vv~lHG~~~~~~~~~~---~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~ 73 (212)
T TIGR01840 2 YVYVPAGL-----TGPRALVLALHGCGQTASAYVI---DWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGT 73 (212)
T ss_pred EEEcCCCC-----CCCCCEEEEeCCCCCCHHHHhh---hcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCC
Confidence 68889875 3678999999998754322110 01134566778999999999975321 112
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCC
Q 042745 133 CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPV 212 (331)
Q Consensus 133 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~ 212 (331)
....|+...++++.+... +|++||+|+|+|+||.+|+.++.+.++ .+++++.+++........
T Consensus 74 ~~~~~~~~~i~~~~~~~~-----------id~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~~~~~g~~~~~~~~ 136 (212)
T TIGR01840 74 GEVESLHQLIDAVKANYS-----------IDPNRVYVTGLSAGGGMTAVLGCTYPD------VFAGGASNAGLPYGEASS 136 (212)
T ss_pred ccHHHHHHHHHHHHHhcC-----------cChhheEEEEECHHHHHHHHHHHhCch------hheEEEeecCCccccccc
Confidence 346778888888877532 889999999999999999999998865 688988888765322111
Q ss_pred CCCccCc-hhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhc
Q 042745 213 GNETTDA-KHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKES 286 (331)
Q Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~ 286 (331)
....... ............. ... .. ... ...||++|+||++|.+|+ .++.+.++|++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-~~~------------~~--~~~-~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 137 SISATPQMCTAATAASVCRLV-RGM------------QS--EYN-GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred chhhHhhcCCCCCHHHHHHHH-hcc------------CC--ccc-CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0000000 0000000111100 000 00 111 123378999999999886 678888888876
No 36
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.75 E-value=4.6e-17 Score=128.41 Aligned_cols=143 Identities=27% Similarity=0.355 Sum_probs=104.0
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCC
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYAD 163 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d 163 (331)
+||++||++. +.. .+..+...++.+ ||.|+.+||++.... ....++..+++++.... .+
T Consensus 1 ~vv~~HG~~~---~~~--~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~ 59 (145)
T PF12695_consen 1 VVVLLHGWGG---SRR--DYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY------------PD 59 (145)
T ss_dssp EEEEECTTTT---TTH--HHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH------------CT
T ss_pred CEEEECCCCC---CHH--HHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc------------CC
Confidence 5899999764 222 266777777655 999999999987755 33446666777764322 57
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCC
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDP 243 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (331)
.++|+|+|||+||.+++.++.+.+ .++++|+++|+.+. .
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~~~-------~v~~~v~~~~~~~~---------------------------~------- 98 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAARNP-------RVKAVVLLSPYPDS---------------------------E------- 98 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHST-------TESEEEEESESSGC---------------------------H-------
T ss_pred CCcEEEEEEccCcHHHHHHhhhcc-------ceeEEEEecCccch---------------------------h-------
Confidence 799999999999999999998762 79999999984210 0
Q ss_pred CCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCcee
Q 042745 244 WINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHV 303 (331)
Q Consensus 244 ~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~ 303 (331)
.+...+. |+++++|++|.+++ ..+.++++++ . +.++++++|++|+
T Consensus 99 ---------~~~~~~~-pv~~i~g~~D~~~~~~~~~~~~~~~~---~--~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 ---------DLAKIRI-PVLFIHGENDPLVPPEQVRRLYEALP---G--PKELYIIPGAGHF 145 (145)
T ss_dssp ---------HHTTTTS-EEEEEEETT-SSSHHHHHHHHHHHHC---S--SEEEEEETTS-TT
T ss_pred ---------hhhccCC-cEEEEEECCCCcCCHHHHHHHHHHcC---C--CcEEEEeCCCcCc
Confidence 2223333 99999999999986 4556666665 2 6899999999994
No 37
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=6e-17 Score=147.84 Aligned_cols=228 Identities=16% Similarity=0.083 Sum_probs=157.2
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCc---hhHHHHHHHHhcCCeEEEEecCCCCCCC--CC---
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSP---FYHSYLNALVSACNVVAVSVDYRRAPEN--PV--- 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~---~~~~~~~~la~~~G~~vv~~dyr~~~~~--~~--- 131 (331)
+..+++.+|.|.+. +..++.|+|+++.||..+.-..... .+.+ +..++ ..||.|+.+|-|++-.. .|
T Consensus 623 g~~lYgmiyKPhn~---~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR-~~~La-slGy~Vv~IDnRGS~hRGlkFE~~ 697 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNF---QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR-FCRLA-SLGYVVVFIDNRGSAHRGLKFESH 697 (867)
T ss_pred CcEEEEEEEccccC---CCCCCCceEEEEcCCCceEEeeccccceehhh-hhhhh-hcceEEEEEcCCCccccchhhHHH
Confidence 88899999999998 5678899999999997654332221 1122 23454 55999999999987431 22
Q ss_pred ------CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 132 ------PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 132 ------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
...++|-..+++||.+... .+|.+||+|.|+|.||++++.+.+++++ .++.+|+-+|+
T Consensus 698 ik~kmGqVE~eDQVeglq~Laeq~g----------fidmdrV~vhGWSYGGYLSlm~L~~~P~------IfrvAIAGapV 761 (867)
T KOG2281|consen 698 IKKKMGQVEVEDQVEGLQMLAEQTG----------FIDMDRVGVHGWSYGGYLSLMGLAQYPN------IFRVAIAGAPV 761 (867)
T ss_pred HhhccCeeeehhhHHHHHHHHHhcC----------cccchheeEeccccccHHHHHHhhcCcc------eeeEEeccCcc
Confidence 2356899999999998753 3899999999999999999999999976 78999988888
Q ss_pred ccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCC-CCCcccCCCCeEEEEEeCCCccch--hHHHHHHH
Q 042745 206 FWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVE-GSSLASMGCARVLVFVAEKDKLAA--RGWLYYEK 282 (331)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~ 282 (331)
.++......+... ++. ++.. ...-...+.+.. ...+..-+. -+|++||--|..|- ..-.+...
T Consensus 762 T~W~~YDTgYTER---------YMg--~P~~--nE~gY~agSV~~~Veklpdepn-RLlLvHGliDENVHF~Hts~Lvs~ 827 (867)
T KOG2281|consen 762 TDWRLYDTGYTER---------YMG--YPDN--NEHGYGAGSVAGHVEKLPDEPN-RLLLVHGLIDENVHFAHTSRLVSA 827 (867)
T ss_pred eeeeeecccchhh---------hcC--CCcc--chhcccchhHHHHHhhCCCCCc-eEEEEecccccchhhhhHHHHHHH
Confidence 8664433222211 110 0100 000011111111 002332222 59999999998885 67788899
Q ss_pred HHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 283 LKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 283 l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
|.++|+ +.++.+||+..|+.-.. +.....-.+++.||+++
T Consensus 828 lvkagK--pyeL~IfP~ERHsiR~~----es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 828 LVKAGK--PYELQIFPNERHSIRNP----ESGIYYEARLLHFLQEN 867 (867)
T ss_pred HHhCCC--ceEEEEccccccccCCC----ccchhHHHHHHHHHhhC
Confidence 999998 99999999999976532 33455566899999863
No 38
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.73 E-value=1.3e-17 Score=147.57 Aligned_cols=237 Identities=17% Similarity=0.192 Sum_probs=137.6
Q ss_pred CCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEe
Q 042745 42 KTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSV 121 (331)
Q Consensus 42 ~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~ 121 (331)
...+...+|++.+ -++..+.++++.|++. .++.|+||.+||.|...+. +.. ...++ ..|++|+.+
T Consensus 51 ~~~~~vy~v~f~s---~~g~~V~g~l~~P~~~-----~~~~Pavv~~hGyg~~~~~-----~~~-~~~~a-~~G~~vl~~ 115 (320)
T PF05448_consen 51 TPGVEVYDVSFES---FDGSRVYGWLYRPKNA-----KGKLPAVVQFHGYGGRSGD-----PFD-LLPWA-AAGYAVLAM 115 (320)
T ss_dssp BSSEEEEEEEEEE---GGGEEEEEEEEEES-S-----SSSEEEEEEE--TT--GGG-----HHH-HHHHH-HTT-EEEEE
T ss_pred CCCEEEEEEEEEc---cCCCEEEEEEEecCCC-----CCCcCEEEEecCCCCCCCC-----ccc-ccccc-cCCeEEEEe
Confidence 3567788999986 5578899999999965 3789999999996643222 222 23455 459999999
Q ss_pred cCCCCCCC------------------CCC---------ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCc
Q 042745 122 DYRRAPEN------------------PVP---------CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSA 174 (331)
Q Consensus 122 dyr~~~~~------------------~~~---------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 174 (331)
|.|+.+.. ... ..+.|+..++++|.+... +|.+||++.|.|.
T Consensus 116 d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpe-----------vD~~rI~v~G~Sq 184 (320)
T PF05448_consen 116 DVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPE-----------VDGKRIGVTGGSQ 184 (320)
T ss_dssp --TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTT-----------EEEEEEEEEEETH
T ss_pred cCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCC-----------cCcceEEEEeecC
Confidence 99865410 011 134799999999998864 8999999999999
Q ss_pred hHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCC--
Q 042745 175 GANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGS-- 252 (331)
Q Consensus 175 GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 252 (331)
||.+|+.+|.-.+ +|++++...|++..-..................+.+..-+.. .........+..-+
T Consensus 185 GG~lal~~aaLd~-------rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~--~~~~~v~~~L~Y~D~~ 255 (320)
T PF05448_consen 185 GGGLALAAAALDP-------RVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHH--EREPEVFETLSYFDAV 255 (320)
T ss_dssp HHHHHHHHHHHSS-------T-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTH--CHHHHHHHHHHTT-HH
T ss_pred chHHHHHHHHhCc-------cccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCc--ccHHHHHHHHhhhhHH
Confidence 9999999998764 799999999988542111000000000011111111000000 00000000000000
Q ss_pred Cc-ccCCCCeEEEEEeCCCccchhHHHH--HHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHH-HHHHHHHhhcc
Q 042745 253 SL-ASMGCARVLVFVAEKDKLAARGWLY--YEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVM-LQQIASFFNLQ 328 (331)
Q Consensus 253 ~l-~~~~~~Pvli~~G~~D~~v~~~~~~--~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~-~~~i~~fl~~~ 328 (331)
++ ..+++ |+++..|-.|..+|.+-.| +.++.. +.++.+|+..+|... .+. .++.++||++|
T Consensus 256 nfA~ri~~-pvl~~~gl~D~~cPP~t~fA~yN~i~~-----~K~l~vyp~~~He~~---------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 256 NFARRIKC-PVLFSVGLQDPVCPPSTQFAAYNAIPG-----PKELVVYPEYGHEYG---------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHGGG--S-EEEEEEETT-SSS-HHHHHHHHCC--S-----SEEEEEETT--SSTT---------HHHHHHHHHHHHHH-
T ss_pred HHHHHcCC-CEEEEEecCCCCCCchhHHHHHhccCC-----CeeEEeccCcCCCch---------hhHHHHHHHHHHhcC
Confidence 22 23566 9999999999999855444 334432 679999999999543 444 77888999876
No 39
>PLN02511 hydrolase
Probab=99.73 E-value=5.4e-16 Score=142.10 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=87.1
Q ss_pred CCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhH-HHHHHHHhcCCeEEEEecCCCCCCCCC-----
Q 042745 58 NNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYH-SYLNALVSACNVVAVSVDYRRAPENPV----- 131 (331)
Q Consensus 58 ~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~-~~~~~la~~~G~~vv~~dyr~~~~~~~----- 131 (331)
.|++.+.++++.+... ......|+||++||.+ |+... .|. ..+..+. +.||.|+++|+|+++....
T Consensus 79 ~DG~~~~ldw~~~~~~---~~~~~~p~vvllHG~~---g~s~~-~y~~~~~~~~~-~~g~~vv~~d~rG~G~s~~~~~~~ 150 (388)
T PLN02511 79 PDGGAVALDWVSGDDR---ALPADAPVLILLPGLT---GGSDD-SYVRHMLLRAR-SKGWRVVVFNSRGCADSPVTTPQF 150 (388)
T ss_pred CCCCEEEEEecCcccc---cCCCCCCEEEEECCCC---CCCCC-HHHHHHHHHHH-HCCCEEEEEecCCCCCCCCCCcCE
Confidence 4577788887765322 1124579999999843 22221 132 3444443 5699999999999875432
Q ss_pred --CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 132 --PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 132 --~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
....+|+..+++++... ....+++++||||||++++.++.+.++. ..+.+++++++..+
T Consensus 151 ~~~~~~~Dl~~~i~~l~~~-------------~~~~~~~lvG~SlGg~i~~~yl~~~~~~----~~v~~~v~is~p~~ 211 (388)
T PLN02511 151 YSASFTGDLRQVVDHVAGR-------------YPSANLYAAGWSLGANILVNYLGEEGEN----CPLSGAVSLCNPFD 211 (388)
T ss_pred EcCCchHHHHHHHHHHHHH-------------CCCCCEEEEEechhHHHHHHHHHhcCCC----CCceEEEEECCCcC
Confidence 24578999999999875 3446899999999999999999887652 14788887776543
No 40
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.73 E-value=4.1e-16 Score=137.06 Aligned_cols=209 Identities=14% Similarity=0.160 Sum_probs=116.1
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCC-----hHHHHHHHHHHHHHhccCCCCCc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPC-----AHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
.|.||++||.+..... +..+...+..++. .||.|+++|+|+++....+. ....+....+.+ +.
T Consensus 30 ~~~ivllHG~~~~~~~--~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l-~~-------- 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGG--WSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM-DA-------- 97 (282)
T ss_pred CCeEEEECCCCCchhh--HHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHH-HH--------
Confidence 4689999995422111 1011233445544 49999999999987754321 111122222222 22
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc-cC---------chhhhHHH
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET-TD---------AKHRAFFD 226 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~-~~---------~~~~~~~~ 226 (331)
.+.+++.++||||||.+|+.++.++++ .++++|+++|............ .. ........
T Consensus 98 -----l~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (282)
T TIGR03343 98 -----LDIEKAHLVGNSMGGATALNFALEYPD------RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLK 166 (282)
T ss_pred -----cCCCCeeEEEECchHHHHHHHHHhChH------hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHH
Confidence 456899999999999999999998865 7999999887532110000000 00 00000000
Q ss_pred H-------------------HHHhhccCCCCC----CCCCCCCCCCC---CCCcccCCCCeEEEEEeCCCccch--hHHH
Q 042745 227 G-------------------IWRMGYRSETNG----CDDPWINPCVE---GSSLASMGCARVLVFVAEKDKLAA--RGWL 278 (331)
Q Consensus 227 ~-------------------~~~~~~~~~~~~----~~~~~~~~~~~---~~~l~~~~~~Pvli~~G~~D~~v~--~~~~ 278 (331)
. .|....... .. .......+... ...+..+++ |+|+++|++|.+++ .++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlli~G~~D~~v~~~~~~~ 244 (282)
T TIGR03343 167 QMLNVFLFDQSLITEELLQGRWENIQRQP-EHLKNFLISSQKAPLSTWDVTARLGEIKA-KTLVTWGRDDRFVPLDHGLK 244 (282)
T ss_pred HHHhhCccCcccCcHHHHHhHHHHhhcCH-HHHHHHHHhccccccccchHHHHHhhCCC-CEEEEEccCCCcCCchhHHH
Confidence 0 010000000 00 00000000000 004567777 99999999999886 3334
Q ss_pred HHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 279 YYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 279 ~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+++.+ . +++++++++++|... .+..+++.+.+.+||+
T Consensus 245 ~~~~~----~--~~~~~~i~~agH~~~-----~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 245 LLWNM----P--DAQLHVFSRCGHWAQ-----WEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHhC----C--CCEEEEeCCCCcCCc-----ccCHHHHHHHHHHHhh
Confidence 43333 2 678999999999755 3455788899999986
No 41
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.73 E-value=7.8e-17 Score=152.85 Aligned_cols=177 Identities=24% Similarity=0.318 Sum_probs=124.9
Q ss_pred eeecceEEEeecCcEEEeccCCCCCCCC-----C------CCCCcc-----------cceeee---cCCCCCCCCceEEE
Q 042745 12 YEFSPLIRVYKDGRVERFVGNDTVPPSF-----D------PKTNVD-----------SKDVVY---SPQNSNNSNALSAR 66 (331)
Q Consensus 12 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~-----~------~~~~v~-----------~~~v~~---~~~~~~~~~~~~~~ 66 (331)
..-.+.+++.....+..|++.|++.|+. . +..++. ...... ......+.+++.++
T Consensus 3 ~t~~G~v~G~~~~~~~~F~GIPYA~pP~g~~Rf~~p~~~~~w~~~~~a~~~g~~c~Q~~~~~~~~~~~~~~~sEdcl~l~ 82 (493)
T cd00312 3 VTPNGKVRGVDEGGVYSFLGIPYAEPPVGDLRFKEPQPYEPWSDVLDATSYPPSCMQWDQLGGGLWNAKLPGSEDCLYLN 82 (493)
T ss_pred EeCCceEEeEEeCCEEEEeccccCCCCCccccCCCCCCCCCCcCceeccccCCCCccCCccccccccCCCCCCCcCCeEE
Confidence 3335777887777899999998755441 1 111110 000000 00001237799999
Q ss_pred EeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCC-eEEEEecCCCCCC---------CCCCChHH
Q 042745 67 LYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACN-VVAVSVDYRRAPE---------NPVPCAHD 136 (331)
Q Consensus 67 ~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G-~~vv~~dyr~~~~---------~~~~~~~~ 136 (331)
+|.|... ...++.|+|||+|||||..|+.... ....++.+.+ ++|+.++||+.+. ......+.
T Consensus 83 i~~p~~~---~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~ 155 (493)
T cd00312 83 VYTPKNT---KPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLK 155 (493)
T ss_pred EEeCCCC---CCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHH
Confidence 9999865 2246789999999999999987642 2245555544 9999999997642 23345689
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
|...+++|++++...+| .|+++|.|+|+|+||+++..++....... .++++|+.|+...
T Consensus 156 D~~~al~wv~~~i~~fg--------gd~~~v~~~G~SaG~~~~~~~~~~~~~~~----lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFG--------GDPDSVTIFGESAGGASVSLLLLSPDSKG----LFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhC--------CCcceEEEEeecHHHHHhhhHhhCcchhH----HHHHHhhhcCCcc
Confidence 99999999999999998 99999999999999999998887654322 6888888887553
No 42
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.72 E-value=3.2e-16 Score=132.33 Aligned_cols=112 Identities=24% Similarity=0.326 Sum_probs=81.5
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCD 241 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
++++||+|+|+|+||.+|+.++.+.+. .+.|+|++|+++.......
T Consensus 102 i~~~ri~l~GFSQGa~~al~~~l~~p~------~~~gvv~lsG~~~~~~~~~---------------------------- 147 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGAAMALYLALRYPE------PLAGVVALSGYLPPESELE---------------------------- 147 (216)
T ss_dssp --GGGEEEEEETHHHHHHHHHHHCTSS------TSSEEEEES---TTGCCCH----------------------------
T ss_pred CChhheehhhhhhHHHHHHHHHHHcCc------CcCEEEEeecccccccccc----------------------------
Confidence 899999999999999999999998875 7999999998874211100
Q ss_pred CCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 242 DPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 242 ~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
.... ... .. |++++||+.|.++| .++...+.|++.+. +++++.|+|++|... .+.++
T Consensus 148 -~~~~------~~~--~~-pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~--~v~~~~~~g~gH~i~---------~~~~~ 206 (216)
T PF02230_consen 148 -DRPE------ALA--KT-PILIIHGDEDPVVPFEWAEKTAEFLKAAGA--NVEFHEYPGGGHEIS---------PEELR 206 (216)
T ss_dssp -CCHC------CCC--TS--EEEEEETT-SSSTHHHHHHHHHHHHCTT---GEEEEEETT-SSS-----------HHHHH
T ss_pred -cccc------ccC--CC-cEEEEecCCCCcccHHHHHHHHHHHHhcCC--CEEEEEcCCCCCCCC---------HHHHH
Confidence 0000 111 12 99999999999998 67889999999998 999999999999766 67889
Q ss_pred HHHHHhhcc
Q 042745 320 QIASFFNLQ 328 (331)
Q Consensus 320 ~i~~fl~~~ 328 (331)
++.+||+++
T Consensus 207 ~~~~~l~~~ 215 (216)
T PF02230_consen 207 DLREFLEKH 215 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999999876
No 43
>PRK10985 putative hydrolase; Provisional
Probab=99.72 E-value=4.3e-16 Score=139.71 Aligned_cols=237 Identities=14% Similarity=0.087 Sum_probs=130.6
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhH-HHHHHHHhcCCeEEEEecCCCCCCCCC-------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYH-SYLNALVSACNVVAVSVDYRRAPENPV------- 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~-~~~~~la~~~G~~vv~~dyr~~~~~~~------- 131 (331)
+..+.+++...... ..+.|+||++||.+ |+... .+. .++..+ .+.||.|+++|||+++..+.
T Consensus 41 g~~~~l~w~~~~~~-----~~~~p~vll~HG~~---g~~~~-~~~~~~~~~l-~~~G~~v~~~d~rG~g~~~~~~~~~~~ 110 (324)
T PRK10985 41 GDFVDLAWSEDPAQ-----ARHKPRLVLFHGLE---GSFNS-PYAHGLLEAA-QKRGWLGVVMHFRGCSGEPNRLHRIYH 110 (324)
T ss_pred CCEEEEecCCCCcc-----CCCCCEEEEeCCCC---CCCcC-HHHHHHHHHH-HHCCCEEEEEeCCCCCCCccCCcceEC
Confidence 65566654322221 24679999999853 22221 132 344555 46699999999999764321
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
....+|+..+++++.+. ....+++++||||||.+++.++.+.... ..+.++|++++.++....
T Consensus 111 ~~~~~D~~~~i~~l~~~-------------~~~~~~~~vG~S~GG~i~~~~~~~~~~~----~~~~~~v~i~~p~~~~~~ 173 (324)
T PRK10985 111 SGETEDARFFLRWLQRE-------------FGHVPTAAVGYSLGGNMLACLLAKEGDD----LPLDAAVIVSAPLMLEAC 173 (324)
T ss_pred CCchHHHHHHHHHHHHh-------------CCCCCEEEEEecchHHHHHHHHHhhCCC----CCccEEEEEcCCCCHHHH
Confidence 23578999999999875 3446899999999999988887776432 148888888876543211
Q ss_pred CCC---CccCchh---hhHHH----HHHHhhccCCC-CC----C--------CCCCCCCCCC-------------CCCcc
Q 042745 212 VGN---ETTDAKH---RAFFD----GIWRMGYRSET-NG----C--------DDPWINPCVE-------------GSSLA 255 (331)
Q Consensus 212 ~~~---~~~~~~~---~~~~~----~~~~~~~~~~~-~~----~--------~~~~~~~~~~-------------~~~l~ 255 (331)
... ....... ...+. .....+ +... .+ . +.....+... ...+.
T Consensus 174 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~ 252 (324)
T PRK10985 174 SYRMEQGFSRVYQRYLLNLLKANAARKLAAY-PGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLN 252 (324)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc-cccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHh
Confidence 100 0000000 00000 000000 0000 00 0 0000011000 00456
Q ss_pred cCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 256 SMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 256 ~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
++++ |+++++|++|++++.. ..+.+.+... ++++.+.++++|.-...........-+-+.+.+||+...
T Consensus 253 ~i~~-P~lii~g~~D~~~~~~--~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 253 QIRK-PTLIIHAKDDPFMTHE--VIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CCCC-CEEEEecCCCCCCChh--hChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 6777 9999999999988632 1122333332 678899999999755322111112345556788886543
No 44
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.72 E-value=6.5e-16 Score=135.25 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=72.1
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC------ChHHHHHHHHHHHHHhccCCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP------CAHDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~~ 154 (331)
+.|.||++||++.. + .. +...+..++.+.||.|+.+|+|+++....+ ..+++....+..+.+.
T Consensus 24 ~~~~vl~~hG~~g~--~-~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (288)
T TIGR01250 24 EKIKLLLLHGGPGM--S-HE--YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK------ 92 (288)
T ss_pred CCCeEEEEcCCCCc--c-HH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH------
Confidence 35789999996432 1 11 345556666666999999999998765433 2244544445444443
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
.+.+++.|+|||+||.+|+.++.+.++ .++++|+.++..
T Consensus 93 -------~~~~~~~liG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~ 131 (288)
T TIGR01250 93 -------LGLDKFYLLGHSWGGMLAQEYALKYGQ------HLKGLIISSMLD 131 (288)
T ss_pred -------cCCCcEEEEEeehHHHHHHHHHHhCcc------ccceeeEecccc
Confidence 445679999999999999999998765 689999887654
No 45
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.71 E-value=2.2e-15 Score=130.31 Aligned_cols=208 Identities=15% Similarity=0.106 Sum_probs=119.0
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC------ChHHHHHHHHHHHHHhccCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP------CAHDDSWAAIKWVASHVNGSG 153 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~ 153 (331)
...|+||++||.+ ++... +..++..+. + +|.|+.+|+|+++....+ ...+|+.+.+++
T Consensus 14 ~~~~~iv~lhG~~---~~~~~--~~~~~~~l~-~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~--------- 77 (255)
T PRK10673 14 HNNSPIVLVHGLF---GSLDN--LGVLARDLV-N-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA--------- 77 (255)
T ss_pred CCCCCEEEECCCC---CchhH--HHHHHHHHh-h-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 5679999999953 33322 556666664 4 799999999998754332 223333333333
Q ss_pred CCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc---------c-Cchhhh
Q 042745 154 PEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET---------T-DAKHRA 223 (331)
Q Consensus 154 ~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~---------~-~~~~~~ 223 (331)
++.+++.|+||||||.+|+.++.+.++ .|+++|++++............ . ......
T Consensus 78 --------l~~~~~~lvGhS~Gg~va~~~a~~~~~------~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (255)
T PRK10673 78 --------LQIEKATFIGHSMGGKAVMALTALAPD------RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQ 143 (255)
T ss_pred --------cCCCceEEEEECHHHHHHHHHHHhCHh------hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHH
Confidence 334679999999999999999988765 7999998753211100000000 0 000000
Q ss_pred HHHHHHHh----------hccCCCCCCCCC--------CCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHh
Q 042745 224 FFDGIWRM----------GYRSETNGCDDP--------WINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKE 285 (331)
Q Consensus 224 ~~~~~~~~----------~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~ 285 (331)
.....+.. ..... ...... ....+.....+..+.+ |+|+++|++|..++ ....+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~G~~D~~~~--~~~~~~~~~ 219 (255)
T PRK10673 144 QAAAIMRQHLNEEGVIQFLLKSF-VDGEWRFNVPVLWDQYPHIVGWEKIPAWPH-PALFIRGGNSPYVT--EAYRDDLLA 219 (255)
T ss_pred HHHHHHHHhcCCHHHHHHHHhcC-CcceeEeeHHHHHHhHHHHhCCcccCCCCC-CeEEEECCCCCCCC--HHHHHHHHH
Confidence 00000000 00000 000000 0000000003445666 99999999998886 234445555
Q ss_pred cCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 286 SGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 286 ~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
... +++++++++++|.... +..+++.+.+.+||+++
T Consensus 220 ~~~--~~~~~~~~~~gH~~~~-----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 220 QFP--QARAHVIAGAGHWVHA-----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred hCC--CcEEEEeCCCCCeeec-----cCHHHHHHHHHHHHhcC
Confidence 433 6789999999997653 44578999999999864
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.71 E-value=1.2e-15 Score=136.94 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=135.2
Q ss_pred CCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCc-----------------hh----HHHHHHHHhcCCe
Q 042745 58 NNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSP-----------------FY----HSYLNALVSACNV 116 (331)
Q Consensus 58 ~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~-----------------~~----~~~~~~la~~~G~ 116 (331)
.|+..+..+.|.|.+ ++.+|+++||-+-..+..... .| ..++..+. +.||
T Consensus 5 ~~g~~l~~~~~~~~~--------~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~-~~G~ 75 (332)
T TIGR01607 5 KDGLLLKTYSWIVKN--------AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN-KNGY 75 (332)
T ss_pred CCCCeEEEeeeeccC--------CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH-HCCC
Confidence 457778888888853 367999999955443321000 01 24456665 5599
Q ss_pred EEEEecCCCCCCCC-----------CCChHHHHHHHHHHHHHhccCCCCC-----ccccc-cCC-CCeEEEeeCCchHHH
Q 042745 117 VAVSVDYRRAPENP-----------VPCAHDDSWAAIKWVASHVNGSGPE-----DWLNR-YAD-FQRVFFAGDSAGANI 178 (331)
Q Consensus 117 ~vv~~dyr~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~-----~~~~~-~~d-~~~i~l~G~S~GG~~ 178 (331)
.|+++|.|+++... +...++|+...++.+.......+.. ++... ... ...++|+||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 99999999886432 2223456666666654420000000 00000 011 246999999999999
Q ss_pred HHHHHHhhcccc--cCCCceeEEEEecccccCCCCCCC-CccCchhhhHHHHHHHhhccCCC---------------CCC
Q 042745 179 AHHMGIRNGREI--LDGFNVAGIVLVHPYFWGSTPVGN-ETTDAKHRAFFDGIWRMGYRSET---------------NGC 240 (331)
Q Consensus 179 Al~~a~~~~~~~--~~~~~i~~~i~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 240 (331)
++.++.+..... .....++|+|+.+|.+........ ..........+........+... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 999887654210 011268999999998743211000 00000000000011111111000 000
Q ss_pred CCCCCC-CCCC--------------CCCcccC--CCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCc
Q 042745 241 DDPWIN-PCVE--------------GSSLASM--GCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGES 301 (331)
Q Consensus 241 ~~~~~~-~~~~--------------~~~l~~~--~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~ 301 (331)
.++... .... ...+..+ .+ |+|+++|++|.+++ .++.+++++... ++++++++++.
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~-P~Lii~G~~D~vv~~~~~~~~~~~~~~~----~~~l~~~~g~~ 310 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDI-PILFIHSKGDCVCSYEGTVSFYNKLSIS----NKELHTLEDMD 310 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCC-CEEEEEeCCCCccCHHHHHHHHHhccCC----CcEEEEECCCC
Confidence 111110 0000 0012233 34 99999999999886 455555554433 56889999999
Q ss_pred eeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 302 HVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 302 H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
|..... .+.+++++.+.+||+
T Consensus 311 H~i~~E----~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 311 HVITIE----PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCccC----CCHHHHHHHHHHHhh
Confidence 976633 235789999999986
No 47
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.71 E-value=8.3e-16 Score=132.51 Aligned_cols=210 Identities=13% Similarity=0.140 Sum_probs=117.2
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----ChHHHHHHHHHHHHHhccCCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP----CAHDDSWAAIKWVASHVNGSGPE 155 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~ 155 (331)
.+.|+||++||.+. +... |...+..+ .+ +|.|+++|+|+++....+ ..++|....+..+.+.
T Consensus 11 ~~~~~iv~lhG~~~---~~~~--~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~------- 76 (257)
T TIGR03611 11 ADAPVVVLSSGLGG---SGSY--WAPQLDVL-TQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA------- 76 (257)
T ss_pred CCCCEEEEEcCCCc---chhH--HHHHHHHH-Hh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-------
Confidence 35789999999543 3222 44444444 44 899999999988754322 2233333333222232
Q ss_pred ccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc----------cCchhhhHH
Q 042745 156 DWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET----------TDAKHRAFF 225 (331)
Q Consensus 156 ~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~----------~~~~~~~~~ 225 (331)
.+.+++.|+|||+||.+|+.++.+.++ .++++|+++++........... .........
T Consensus 77 ------~~~~~~~l~G~S~Gg~~a~~~a~~~~~------~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (257)
T TIGR03611 77 ------LNIERFHFVGHALGGLIGLQLALRYPE------RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQ 144 (257)
T ss_pred ------hCCCcEEEEEechhHHHHHHHHHHChH------HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhh
Confidence 445789999999999999999988765 6999999887654311000000 000000000
Q ss_pred H-H----HHH-hhccC---CCCCCCCCCC------------CCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHH
Q 042745 226 D-G----IWR-MGYRS---ETNGCDDPWI------------NPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEK 282 (331)
Q Consensus 226 ~-~----~~~-~~~~~---~~~~~~~~~~------------~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~ 282 (331)
. . .|. ..... .......... ........+..+++ |+++++|++|.+++ .+..+++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~ 223 (257)
T TIGR03611 145 ALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQH-PVLLIANRDDMLVPYTQSLRLAAA 223 (257)
T ss_pred hhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCc-cEEEEecCcCcccCHHHHHHHHHh
Confidence 0 0 000 00000 0000000000 00000004556666 99999999999886 33334333
Q ss_pred HHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 283 LKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 283 l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
+ . +++++.+++++|.+.. ++.+++.+.+.+||++
T Consensus 224 ~----~--~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 224 L----P--NAQLKLLPYGGHASNV-----TDPETFNRALLDFLKT 257 (257)
T ss_pred c----C--CceEEEECCCCCCccc-----cCHHHHHHHHHHHhcC
Confidence 2 2 5688889999997653 4558899999999863
No 48
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.70 E-value=9.8e-16 Score=130.91 Aligned_cols=208 Identities=16% Similarity=0.209 Sum_probs=119.4
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-----ChHHHHHHH-HHHHHHhccCCCCC
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-----CAHDDSWAA-IKWVASHVNGSGPE 155 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-----~~~~d~~~~-~~~l~~~~~~~~~~ 155 (331)
+|+||++||.+ ++... |...+..++ .|+.|+.+|+++.+....+ ..++++... +..+.+.
T Consensus 1 ~~~vv~~hG~~---~~~~~--~~~~~~~L~--~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------- 66 (251)
T TIGR03695 1 KPVLVFLHGFL---GSGAD--WQALIELLG--PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ------- 66 (251)
T ss_pred CCEEEEEcCCC---Cchhh--HHHHHHHhc--ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH-------
Confidence 37899999954 33322 566666665 4999999999988765432 223333333 4444433
Q ss_pred ccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCC---ccCch--------hhhH
Q 042745 156 DWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNE---TTDAK--------HRAF 224 (331)
Q Consensus 156 ~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~---~~~~~--------~~~~ 224 (331)
.+.+++.|+|||+||.+|+.++.+.++ .+++++++++........... ..... ....
T Consensus 67 ------~~~~~~~l~G~S~Gg~ia~~~a~~~~~------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T TIGR03695 67 ------LGIEPFFLVGYSMGGRIALYYALQYPE------RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA 134 (251)
T ss_pred ------cCCCeEEEEEeccHHHHHHHHHHhCch------heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH
Confidence 455789999999999999999998865 699999988765322110000 00000 0000
Q ss_pred HHHHHHhh--ccCC--CC------------CCCCCC-C------CCCCCC---CCcccCCCCeEEEEEeCCCccchhHHH
Q 042745 225 FDGIWRMG--YRSE--TN------------GCDDPW-I------NPCVEG---SSLASMGCARVLVFVAEKDKLAARGWL 278 (331)
Q Consensus 225 ~~~~~~~~--~~~~--~~------------~~~~~~-~------~~~~~~---~~l~~~~~~Pvli~~G~~D~~v~~~~~ 278 (331)
....+... +... .. ...... . ...... ..+..+.+ |+++++|++|..++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~--- 210 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTI-PVLYLCGEKDEKFVQ--- 210 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCC-ceEEEeeCcchHHHH---
Confidence 00000000 0000 00 000000 0 000000 03455666 999999999977642
Q ss_pred HHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 279 YYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 279 ~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
..+.+.+... +++++++++++|..... ..+++.+.|.+||+
T Consensus 211 ~~~~~~~~~~--~~~~~~~~~~gH~~~~e-----~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 211 IAKEMQKLLP--NLTLVIIANAGHNIHLE-----NPEAFAKILLAFLE 251 (251)
T ss_pred HHHHHHhcCC--CCcEEEEcCCCCCcCcc-----ChHHHHHHHHHHhC
Confidence 3344555443 68899999999976643 34778888888874
No 49
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.70 E-value=1.9e-15 Score=132.16 Aligned_cols=207 Identities=15% Similarity=0.120 Sum_probs=119.3
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC----CChHHHHHHHHHHHHHhccCCCCCc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV----PCAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
..|+||++||.+. +... |..++..++ + +|.|+.+|+|+++.... ...+++..+.+..+.+.
T Consensus 27 ~~~~vv~~hG~~~---~~~~--~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-------- 91 (278)
T TIGR03056 27 AGPLLLLLHGTGA---STHS--WRDLMPPLA-R-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA-------- 91 (278)
T ss_pred CCCeEEEEcCCCC---CHHH--HHHHHHHHh-h-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH--------
Confidence 3589999999542 2222 556666654 4 69999999998875432 23355555555555443
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc----c-----Cchhh-----
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET----T-----DAKHR----- 222 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~----~-----~~~~~----- 222 (331)
.+.+++.|+|||+||.+|+.++.+.++ .+++++++++............ . .....
T Consensus 92 -----~~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (278)
T TIGR03056 92 -----EGLSPDGVIGHSAGAAIALRLALDGPV------TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSR 160 (278)
T ss_pred -----cCCCCceEEEECccHHHHHHHHHhCCc------ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHh
Confidence 334678999999999999999988764 6888888876543211000000 0 00000
Q ss_pred -----hHHHHHHHhhccCCCC-----------CCCC-----------CCCCCCCCCCCcccCCCCeEEEEEeCCCccchh
Q 042745 223 -----AFFDGIWRMGYRSETN-----------GCDD-----------PWINPCVEGSSLASMGCARVLVFVAEKDKLAAR 275 (331)
Q Consensus 223 -----~~~~~~~~~~~~~~~~-----------~~~~-----------~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~ 275 (331)
.......... ..... .... ....+.. ..+.++++ |+++++|++|.+++.
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~-P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 161 GAADQQRVERLIRDT-GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLN--RDLPRITI-PLHLIAGEEDKAVPP 236 (278)
T ss_pred hcccCcchhHHhhcc-ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchh--hhcccCCC-CEEEEEeCCCcccCH
Confidence 0000000000 00000 0000 0000000 03556677 999999999999873
Q ss_pred HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 276 GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 276 ~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
. ..+.+.+.-. ++++.++++++|.+.. +..+++.+.|.+||+
T Consensus 237 ~--~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 237 D--ESKRAATRVP--TATLHVVPGGGHLVHE-----EQADGVVGLILQAAE 278 (278)
T ss_pred H--HHHHHHHhcc--CCeEEEECCCCCcccc-----cCHHHHHHHHHHHhC
Confidence 2 2233433322 5688999999997663 355889999999985
No 50
>COG0400 Predicted esterase [General function prediction only]
Probab=99.70 E-value=5.6e-16 Score=127.74 Aligned_cols=176 Identities=22% Similarity=0.218 Sum_probs=123.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC-----------CCCCC--CChHHHHHHHHHHHH
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA-----------PENPV--PCAHDDSWAAIKWVA 146 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~-----------~~~~~--~~~~~d~~~~~~~l~ 146 (331)
...|+||++||-| ++..+ +.++...++ - .+.++++.=+-. ....+ .....+.....+++.
T Consensus 16 p~~~~iilLHG~G---gde~~--~~~~~~~~~-P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 16 PAAPLLILLHGLG---GDELD--LVPLPELIL-P-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCcEEEEEecCC---CChhh--hhhhhhhcC-C-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 4678999999955 44433 334333332 2 466665542211 11122 223345555666666
Q ss_pred HhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHH
Q 042745 147 SHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFD 226 (331)
Q Consensus 147 ~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 226 (331)
....+++ ++.+|++++|+|.|+++|+.++.+.+. .++++|+++|.+-....
T Consensus 89 ~~~~~~g--------i~~~~ii~~GfSqGA~ial~~~l~~~~------~~~~ail~~g~~~~~~~--------------- 139 (207)
T COG0400 89 ELAEEYG--------IDSSRIILIGFSQGANIALSLGLTLPG------LFAGAILFSGMLPLEPE--------------- 139 (207)
T ss_pred HHHHHhC--------CChhheEEEecChHHHHHHHHHHhCch------hhccchhcCCcCCCCCc---------------
Confidence 6666666 999999999999999999999999875 79999999988732110
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceee
Q 042745 227 GIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVF 304 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~ 304 (331)
..+ ++.. +|++++||+.|++++ .+.++.+.|++.|. +++++.++ ++|..
T Consensus 140 ------------------~~~-----~~~~---~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~--~v~~~~~~-~GH~i 190 (207)
T COG0400 140 ------------------LLP-----DLAG---TPILLSHGTEDPVVPLALAEALAEYLTASGA--DVEVRWHE-GGHEI 190 (207)
T ss_pred ------------------ccc-----ccCC---CeEEEeccCcCCccCHHHHHHHHHHHHHcCC--CEEEEEec-CCCcC
Confidence 011 2222 299999999999987 78889999999998 99999999 78976
Q ss_pred eecCCCcHHHHHHHHHHHHHhhccC
Q 042745 305 HLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 305 ~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
. .+.++.+.+|+.+..
T Consensus 191 ~---------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 191 P---------PEELEAARSWLANTL 206 (207)
T ss_pred C---------HHHHHHHHHHHHhcc
Confidence 6 677888888987653
No 51
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.70 E-value=1.3e-15 Score=133.52 Aligned_cols=208 Identities=14% Similarity=0.142 Sum_probs=118.8
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCC---hHHHHHHHHHHHHHhccCCCCCccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPC---AHDDSWAAIKWVASHVNGSGPEDWL 158 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~ 158 (331)
.+.|||+||.+. +... |..++..+ .+ ++.|+++|+++++....+. .+++..+.+.-+.+.
T Consensus 25 ~~plvllHG~~~---~~~~--w~~~~~~L-~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~---------- 87 (276)
T TIGR02240 25 LTPLLIFNGIGA---NLEL--VFPFIEAL-DP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY---------- 87 (276)
T ss_pred CCcEEEEeCCCc---chHH--HHHHHHHh-cc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----------
Confidence 468999998442 3222 55666665 34 7999999999988754332 233433333333333
Q ss_pred cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc-----cCch-h-h-----hHHH
Q 042745 159 NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET-----TDAK-H-R-----AFFD 226 (331)
Q Consensus 159 ~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~-----~~~~-~-~-----~~~~ 226 (331)
.+.+++.|+||||||.+|+.+|.+.++ .++++|++++............ .... . . ....
T Consensus 88 ---l~~~~~~LvG~S~GG~va~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
T TIGR02240 88 ---LDYGQVNAIGVSWGGALAQQFAHDYPE------RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAP 158 (276)
T ss_pred ---hCcCceEEEEECHHHHHHHHHHHHCHH------HhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhh
Confidence 344789999999999999999998876 7999999987653211000000 0000 0 0 0000
Q ss_pred HHHHhhccCCCC--------CCCCCCC-------CCCCCC--CCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcC
Q 042745 227 GIWRMGYRSETN--------GCDDPWI-------NPCVEG--SSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESG 287 (331)
Q Consensus 227 ~~~~~~~~~~~~--------~~~~~~~-------~~~~~~--~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g 287 (331)
..+......... ....... ...... ..+.++.+ |+|+++|++|.+++ .++.+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~v~~~~~~~l~~~~~--- 234 (276)
T TIGR02240 159 DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ-PTLVLAGDDDPIIPLINMRLLAWRIP--- 234 (276)
T ss_pred hhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC-CEEEEEeCCCCcCCHHHHHHHHHhCC---
Confidence 000000000000 0000000 000000 14667777 99999999999886 3344444332
Q ss_pred CCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 288 WKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 288 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+.+++++++ +|... .+..+++.+.+.+|+.+.
T Consensus 235 ---~~~~~~i~~-gH~~~-----~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 235 ---NAELHIIDD-GHLFL-----ITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred ---CCEEEEEcC-CCchh-----hccHHHHHHHHHHHHHHh
Confidence 457778876 99644 345688999999999864
No 52
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.69 E-value=1.1e-16 Score=153.27 Aligned_cols=130 Identities=28% Similarity=0.441 Sum_probs=95.2
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC-------CCC--C
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA-------PEN--P 130 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~-------~~~--~ 130 (331)
.+++.++||.|... ....+.||+||||||||..|+.....+. ...++.+.+++||.++||+. ++. .
T Consensus 106 EDCL~LnI~~P~~~---~~~~~lPV~v~ihGG~f~~G~~~~~~~~--~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~ 180 (535)
T PF00135_consen 106 EDCLYLNIYTPSNA---SSNSKLPVMVWIHGGGFMFGSGSFPPYD--GASLAASKDVIVVTINYRLGAFGFLSLGDLDAP 180 (535)
T ss_dssp S---EEEEEEETSS---SSTTSEEEEEEE--STTTSSCTTSGGGH--THHHHHHHTSEEEEE----HHHHH-BSSSTTSH
T ss_pred chHHHHhhhhcccc---ccccccceEEEeecccccCCCccccccc--ccccccCCCEEEEEecccccccccccccccccC
Confidence 57999999999998 2334799999999999999998322222 23455566999999999974 222 2
Q ss_pred -CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 131 -VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 131 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
....+.|...|++|++++...|| .|++||.|+|+|+||..+..++......+ .++++|+.|+..
T Consensus 181 ~gN~Gl~Dq~~AL~WV~~nI~~FG--------GDp~~VTl~G~SAGa~sv~~~l~sp~~~~----LF~raI~~SGs~ 245 (535)
T PF00135_consen 181 SGNYGLLDQRLALKWVQDNIAAFG--------GDPDNVTLFGQSAGAASVSLLLLSPSSKG----LFHRAILQSGSA 245 (535)
T ss_dssp BSTHHHHHHHHHHHHHHHHGGGGT--------EEEEEEEEEEETHHHHHHHHHHHGGGGTT----SBSEEEEES--T
T ss_pred chhhhhhhhHHHHHHHHhhhhhcc--------cCCcceeeeeecccccccceeeecccccc----cccccccccccc
Confidence 56688999999999999999999 99999999999999999988777654433 699999999843
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.69 E-value=7.3e-15 Score=133.24 Aligned_cols=130 Identities=12% Similarity=0.128 Sum_probs=88.7
Q ss_pred cccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcC---CcccccCCCCchhHHHHHHHHhcCCeEEEEe
Q 042745 45 VDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHG---GGFCIETPFSPFYHSYLNALVSACNVVAVSV 121 (331)
Q Consensus 45 v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HG---gg~~~g~~~~~~~~~~~~~la~~~G~~vv~~ 121 (331)
....+|.+. ...+.+.-|.|... ....+.||++|| .+++..... ...++..++ +.||.|+.+
T Consensus 36 ~~~~~~v~~------~~~~~l~~~~~~~~-----~~~~~pvl~v~~~~~~~~~~d~~~---~~~~~~~L~-~~G~~V~~~ 100 (350)
T TIGR01836 36 VTPKEVVYR------EDKVVLYRYTPVKD-----NTHKTPLLIVYALVNRPYMLDLQE---DRSLVRGLL-ERGQDVYLI 100 (350)
T ss_pred CCCCceEEE------cCcEEEEEecCCCC-----cCCCCcEEEeccccccceeccCCC---CchHHHHHH-HCCCeEEEE
Confidence 444566665 45778888887643 123345899997 222221111 245666665 569999999
Q ss_pred cCCCCCCCC----CCChH-HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCce
Q 042745 122 DYRRAPENP----VPCAH-DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNV 196 (331)
Q Consensus 122 dyr~~~~~~----~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i 196 (331)
|+++.+... +.... .|+.++++++.+. .+.++|.++||||||.+++.++...++ .+
T Consensus 101 D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~-------------~~~~~i~lvGhS~GG~i~~~~~~~~~~------~v 161 (350)
T TIGR01836 101 DWGYPDRADRYLTLDDYINGYIDKCVDYICRT-------------SKLDQISLLGICQGGTFSLCYAALYPD------KI 161 (350)
T ss_pred eCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHH-------------hCCCcccEEEECHHHHHHHHHHHhCch------he
Confidence 999865432 22222 3477788898876 445789999999999999999887764 69
Q ss_pred eEEEEecccccC
Q 042745 197 AGIVLVHPYFWG 208 (331)
Q Consensus 197 ~~~i~~~p~~~~ 208 (331)
+++|+++|.++.
T Consensus 162 ~~lv~~~~p~~~ 173 (350)
T TIGR01836 162 KNLVTMVTPVDF 173 (350)
T ss_pred eeEEEecccccc
Confidence 999999887764
No 54
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.68 E-value=8.4e-15 Score=134.80 Aligned_cols=100 Identities=20% Similarity=0.357 Sum_probs=68.9
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCC----hHHHHH-----HHHHHHHHhcc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPC----AHDDSW-----AAIKWVASHVN 150 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~----~~~d~~-----~~~~~l~~~~~ 150 (331)
+..|+||++||.++.. . .|...+..++ + +|.|+++|+|+++....+. ..+++. ...+|+..
T Consensus 103 ~~~p~vvllHG~~~~~---~--~~~~~~~~L~-~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 172 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ---G--FFFRNFDALA-S-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA--- 172 (402)
T ss_pred CCCCEEEEECCCCcch---h--HHHHHHHHHH-h-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---
Confidence 3568999999965422 1 1455566664 4 6999999999987654332 112221 12233322
Q ss_pred CCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 151 GSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 151 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
.+.+++.|+||||||.+|+.++.++++ .++++|+++|..
T Consensus 173 -----------l~~~~~~lvGhS~GG~la~~~a~~~p~------~v~~lvl~~p~~ 211 (402)
T PLN02894 173 -----------KNLSNFILLGHSFGGYVAAKYALKHPE------HVQHLILVGPAG 211 (402)
T ss_pred -----------cCCCCeEEEEECHHHHHHHHHHHhCch------hhcEEEEECCcc
Confidence 345689999999999999999999865 799999998764
No 55
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.68 E-value=1.3e-15 Score=130.34 Aligned_cols=209 Identities=19% Similarity=0.222 Sum_probs=116.5
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC---ChHHHHHHHHHHHHHhccCCCCCcc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP---CAHDDSWAAIKWVASHVNGSGPEDW 157 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~~~~~ 157 (331)
.+|+||++||.|. +... |..++..+ .+ ||.|+++|+++++....+ ..+++....+..+.+.
T Consensus 12 ~~~~li~~hg~~~---~~~~--~~~~~~~l-~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~--------- 75 (251)
T TIGR02427 12 GAPVLVFINSLGT---DLRM--WDPVLPAL-TP-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH--------- 75 (251)
T ss_pred CCCeEEEEcCccc---chhh--HHHHHHHh-hc-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 5689999998542 2221 45555554 34 899999999998764322 2344444444444443
Q ss_pred ccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc-----cCchhhhHHHHHHHhh
Q 042745 158 LNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET-----TDAKHRAFFDGIWRMG 232 (331)
Q Consensus 158 ~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 232 (331)
.+.+++.|+|||+||.+|+.+|.+.++ .++++|++++............ ................
T Consensus 76 ----~~~~~v~liG~S~Gg~~a~~~a~~~p~------~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR02427 76 ----LGIERAVFCGLSLGGLIAQGLAARRPD------RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERW 145 (251)
T ss_pred ----hCCCceEEEEeCchHHHHHHHHHHCHH------HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHH
Confidence 445789999999999999999988754 6888888876432211000000 0000000000000000
Q ss_pred ccCCCCCCCCC-----------------------CCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCC
Q 042745 233 YRSETNGCDDP-----------------------WINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWK 289 (331)
Q Consensus 233 ~~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~ 289 (331)
.... ...... ..........+.++++ |+++++|++|.+++.. ..+.+.+.-.
T Consensus 146 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pvlii~g~~D~~~~~~--~~~~~~~~~~- 220 (251)
T TIGR02427 146 FTPG-FREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAV-PTLCIAGDQDGSTPPE--LVREIADLVP- 220 (251)
T ss_pred cccc-cccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCC-CeEEEEeccCCcCChH--HHHHHHHhCC-
Confidence 0000 000000 0000000003455666 9999999999998732 2223333322
Q ss_pred cceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 290 GRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 290 ~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+.+++++++++|.... +..+++.+.+.+||+
T Consensus 221 -~~~~~~~~~~gH~~~~-----~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 221 -GARFAEIRGAGHIPCV-----EQPEAFNAALRDFLR 251 (251)
T ss_pred -CceEEEECCCCCcccc-----cChHHHHHHHHHHhC
Confidence 5688999999997653 345788888888874
No 56
>PRK06489 hypothetical protein; Provisional
Probab=99.68 E-value=2.8e-15 Score=136.42 Aligned_cols=251 Identities=12% Similarity=0.064 Sum_probs=133.6
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhH--HHHHHHH------hcC
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYH--SYLNALV------SAC 114 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~--~~~~~la------~~~ 114 (331)
.....++.++.++++.++..+....+-..+.. ...+..|.||++||++.. ... |. .+...+. ...
T Consensus 32 ~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~--~~~~~gpplvllHG~~~~---~~~--~~~~~~~~~l~~~~~~l~~~ 104 (360)
T PRK06489 32 GDWVARDFTFHSGETLPELRLHYTTLGTPHRN--ADGEIDNAVLVLHGTGGS---GKS--FLSPTFAGELFGPGQPLDAS 104 (360)
T ss_pred CceeccceeccCCCCcCCceEEEEecCCCCcc--cccCCCCeEEEeCCCCCc---hhh--hccchhHHHhcCCCCccccc
Confidence 33456777887754444444443332110000 001126889999996532 211 11 2222221 134
Q ss_pred CeEEEEecCCCCCCCCCC----------ChHHHHHH-HHHHHHHhccCCCCCccccccCCCCeEE-EeeCCchHHHHHHH
Q 042745 115 NVVAVSVDYRRAPENPVP----------CAHDDSWA-AIKWVASHVNGSGPEDWLNRYADFQRVF-FAGDSAGANIAHHM 182 (331)
Q Consensus 115 G~~vv~~dyr~~~~~~~~----------~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~-l~G~S~GG~~Al~~ 182 (331)
+|.|+++|+|+++....+ ..+++..+ .+.++.+. .+.+++. |+||||||.+|+.+
T Consensus 105 ~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~-------------lgi~~~~~lvG~SmGG~vAl~~ 171 (360)
T PRK06489 105 KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEG-------------LGVKHLRLILGTSMGGMHAWMW 171 (360)
T ss_pred CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHh-------------cCCCceeEEEEECHHHHHHHHH
Confidence 799999999998765332 23444443 33444443 3446774 89999999999999
Q ss_pred HHhhcccccCCCceeEEEEecccccCCCCC---------------CCC--ccCchhhhHHHH------------------
Q 042745 183 GIRNGREILDGFNVAGIVLVHPYFWGSTPV---------------GNE--TTDAKHRAFFDG------------------ 227 (331)
Q Consensus 183 a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~---------------~~~--~~~~~~~~~~~~------------------ 227 (331)
+.++++ +++++|++++........ ... ............
T Consensus 172 A~~~P~------~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (360)
T PRK06489 172 GEKYPD------FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQA 245 (360)
T ss_pred HHhCch------hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999876 799999987642110000 000 000000000000
Q ss_pred ----------HHHhhccCCCCCCCCC--C---CCC---CCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCC
Q 042745 228 ----------IWRMGYRSETNGCDDP--W---INP---CVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWK 289 (331)
Q Consensus 228 ----------~~~~~~~~~~~~~~~~--~---~~~---~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~ 289 (331)
.+....... ..... . ... ......+.++++ |+|+++|++|.+++......+.+.+.-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~L~~I~~-PvLvI~G~~D~~~p~~~~~~~~la~~ip- 321 (360)
T PRK06489 246 QAPTRAAADKLVDERLAAP--VTADANDFLYQWDSSRDYNPSPDLEKIKA-PVLAINSADDERNPPETGVMEAALKRVK- 321 (360)
T ss_pred hcCChHHHHHHHHHHHHhh--hhcCHHHHHHHHHHhhccChHHHHHhCCC-CEEEEecCCCcccChhhHHHHHHHHhCc-
Confidence 000000000 00000 0 000 000015667888 9999999999888743222223333322
Q ss_pred cceEEEEeCCC----ceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 290 GRAEIVETKGE----SHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 290 ~~~~~~~~~g~----~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
+.++++++++ +|... ++.+++.+.+.+||+++.+
T Consensus 322 -~a~l~~i~~a~~~~GH~~~------e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 322 -HGRLVLIPASPETRGHGTT------GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred -CCeEEEECCCCCCCCcccc------cCHHHHHHHHHHHHHhccc
Confidence 5789999996 99653 3568899999999987653
No 57
>PLN02965 Probable pheophorbidase
Probab=99.67 E-value=1.2e-14 Score=125.88 Aligned_cols=209 Identities=11% Similarity=0.067 Sum_probs=117.1
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----ChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP----CAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
.|||+||.+ .+... |...+..|. +.||.|+++|+|+++....+ ..+++..+.+.-+.+.
T Consensus 5 ~vvllHG~~---~~~~~--w~~~~~~L~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----------- 67 (255)
T PLN02965 5 HFVFVHGAS---HGAWC--WYKLATLLD-AAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD----------- 67 (255)
T ss_pred EEEEECCCC---CCcCc--HHHHHHHHh-hCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh-----------
Confidence 499999955 22222 566666665 44999999999998765422 2244443333333332
Q ss_pred ccCCC-CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC---------CCC------C-----ccC
Q 042745 160 RYADF-QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP---------VGN------E-----TTD 218 (331)
Q Consensus 160 ~~~d~-~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~---------~~~------~-----~~~ 218 (331)
.+. +++.|+||||||.+|+.++.++++ .|+++|++++....... ... . ...
T Consensus 68 --l~~~~~~~lvGhSmGG~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
T PLN02965 68 --LPPDHKVILVGHSIGGGSVTEALCKFTD------KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDK 139 (255)
T ss_pred --cCCCCCEEEEecCcchHHHHHHHHhCch------heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCC
Confidence 223 589999999999999999998865 79999998764210000 000 0 000
Q ss_pred chhhhHH-HHHH-HhhccCCC-----------CCCCC-CCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHH
Q 042745 219 AKHRAFF-DGIW-RMGYRSET-----------NGCDD-PWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLK 284 (331)
Q Consensus 219 ~~~~~~~-~~~~-~~~~~~~~-----------~~~~~-~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~ 284 (331)
....... ..+. ...+.... ..... ...........+..++. |+++++|++|..++. ...+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-P~lvi~g~~D~~~~~--~~~~~~~ 216 (255)
T PLN02965 140 PPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKV-PRVYIKTAKDNLFDP--VRQDVMV 216 (255)
T ss_pred CcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCC-CEEEEEcCCCCCCCH--HHHHHHH
Confidence 0000000 0011 00000000 00000 00000000003345666 999999999998863 2334444
Q ss_pred hcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 285 ESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 285 ~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
+.-. +++++++++++|... .++.+++.+.+.+|++.
T Consensus 217 ~~~~--~a~~~~i~~~GH~~~-----~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 217 ENWP--PAQTYVLEDSDHSAF-----FSVPTTLFQYLLQAVSS 252 (255)
T ss_pred HhCC--cceEEEecCCCCchh-----hcCHHHHHHHHHHHHHH
Confidence 4432 568899999999766 34557788888888764
No 58
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.67 E-value=5.5e-15 Score=134.41 Aligned_cols=213 Identities=14% Similarity=0.171 Sum_probs=123.0
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----ChHHHHHH-HHHHHHHhccCCCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP----CAHDDSWA-AIKWVASHVNGSGPE 155 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~----~~~~d~~~-~~~~l~~~~~~~~~~ 155 (331)
..|+||++||.+. +.. .|...+..+. + +|.|+.+|+++++....+ ..+++... ..+++..
T Consensus 87 ~gp~lvllHG~~~---~~~--~w~~~~~~L~-~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~-------- 151 (360)
T PLN02679 87 SGPPVLLVHGFGA---SIP--HWRRNIGVLA-K-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE-------- 151 (360)
T ss_pred CCCeEEEECCCCC---CHH--HHHHHHHHHh-c-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH--------
Confidence 3478999999542 222 2556666553 4 799999999998765432 22333333 3333332
Q ss_pred ccccccCCCCeEEEeeCCchHHHHHHHHHh-hcccccCCCceeEEEEecccccCCCCC--CCCcc---------------
Q 042745 156 DWLNRYADFQRVFFAGDSAGANIAHHMGIR-NGREILDGFNVAGIVLVHPYFWGSTPV--GNETT--------------- 217 (331)
Q Consensus 156 ~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~-~~~~~~~~~~i~~~i~~~p~~~~~~~~--~~~~~--------------- 217 (331)
...+++.|+|||+||.+|+.++.+ .++ +|+++|++++........ .....
T Consensus 152 ------l~~~~~~lvGhS~Gg~ia~~~a~~~~P~------rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 152 ------VVQKPTVLIGNSVGSLACVIAASESTRD------LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred ------hcCCCeEEEEECHHHHHHHHHHHhcChh------hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 334789999999999999988864 444 799999998754221100 00000
Q ss_pred Cc-hh---------hhHHHHHHHhhccCCCCC------------CCCC-C-------CC-CCCCC--CCcccCCCCeEEE
Q 042745 218 DA-KH---------RAFFDGIWRMGYRSETNG------------CDDP-W-------IN-PCVEG--SSLASMGCARVLV 264 (331)
Q Consensus 218 ~~-~~---------~~~~~~~~~~~~~~~~~~------------~~~~-~-------~~-~~~~~--~~l~~~~~~Pvli 264 (331)
.. .. ...+...+...+... .. .... . .. ..... ..+..+++ |+||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PtLi 297 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNK-EAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISL-PILV 297 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCc-ccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCC-CEEE
Confidence 00 00 000111111111100 00 0000 0 00 00000 04556777 9999
Q ss_pred EEeCCCccchhH---HHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 265 FVAEKDKLAARG---WLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 265 ~~G~~D~~v~~~---~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
++|++|.+++.. ..+.+.+.+.-. +++++++++++|... .+..+++.+.+.+||++..
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~aGH~~~-----~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGVGHCPH-----DDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCCCCCcc-----ccCHHHHHHHHHHHHHhcC
Confidence 999999988633 234455655433 789999999999644 4567899999999998643
No 59
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.65 E-value=5.1e-15 Score=131.13 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=118.7
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCC---hHHHHHHHHHHHHHhccCCCCCccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPC---AHDDSWAAIKWVASHVNGSGPEDWL 158 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~ 158 (331)
.|.||++||.+ ++.. .|...+..++.+ + .|+++|.|+++....+. ..++....+..+.+.
T Consensus 27 g~~vvllHG~~---~~~~--~w~~~~~~L~~~-~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~---------- 89 (295)
T PRK03592 27 GDPIVFLHGNP---TSSY--LWRNIIPHLAGL-G-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA---------- 89 (295)
T ss_pred CCEEEEECCCC---CCHH--HHHHHHHHHhhC-C-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----------
Confidence 47899999854 2222 255666666544 4 99999999987654332 233332223333332
Q ss_pred cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHH-------------
Q 042745 159 NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFF------------- 225 (331)
Q Consensus 159 ~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~------------- 225 (331)
.+.+++.|+|||+||.+|+.++.+.++ .++++|++++....................+
T Consensus 90 ---l~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 90 ---LGLDDVVLVGHDWGSALGFDWAARHPD------RVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred ---hCCCCeEEEEECHHHHHHHHHHHhChh------heeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 334789999999999999999999876 7999999987432211000000000000000
Q ss_pred HHHHHhhccCCC----------------CCCC--CCC------CCC---------CCC--CCCcccCCCCeEEEEEeCCC
Q 042745 226 DGIWRMGYRSET----------------NGCD--DPW------INP---------CVE--GSSLASMGCARVLVFVAEKD 270 (331)
Q Consensus 226 ~~~~~~~~~~~~----------------~~~~--~~~------~~~---------~~~--~~~l~~~~~~Pvli~~G~~D 270 (331)
..+......... .... ... ... ... ...+.++++ |+|+++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D 239 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV-PKLLINAEPG 239 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC-CeEEEeccCC
Confidence 000000000000 0000 000 000 000 003455677 9999999999
Q ss_pred ccc-h-hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 271 KLA-A-RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 271 ~~v-~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
..+ + ....+...+.. +++++++++++|... .+..+++.+.+.+||++..
T Consensus 240 ~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~-----~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 240 AILTTGAIRDWCRSWPN-----QLEITVFGAGLHFAQ-----EDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred cccCcHHHHHHHHHhhh-----hcceeeccCcchhhh-----hcCHHHHHHHHHHHHHHhc
Confidence 988 4 33333322221 468889999999655 3456889999999998753
No 60
>PRK11071 esterase YqiA; Provisional
Probab=99.65 E-value=1.9e-14 Score=118.78 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=103.4
Q ss_pred cEEEEEcCCcccccCCCCchhH-HHHHHHHhc--CCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 83 PLLVYIHGGGFCIETPFSPFYH-SYLNALVSA--CNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~-~~~~~la~~--~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
|.|||+||.+ ++... +. ..+..++.+ .++.|+.+|.++.+ +++...+..+.+.
T Consensus 2 p~illlHGf~---ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~----------- 57 (190)
T PRK11071 2 STLLYLHGFN---SSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLE----------- 57 (190)
T ss_pred CeEEEECCCC---CCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHH-----------
Confidence 6899999843 33332 22 233344433 37999999999763 3455555555554
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCC---CccCch---hhhHHHHHHHhhc
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGN---ETTDAK---HRAFFDGIWRMGY 233 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~ 233 (331)
.+.+++.++|+|+||.+|+.++.+.+ . .+|+++|..+....... ...... .......+.....
T Consensus 58 --~~~~~~~lvG~S~Gg~~a~~~a~~~~--------~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 126 (190)
T PRK11071 58 --HGGDPLGLVGSSLGGYYATWLSQCFM--------L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLK 126 (190)
T ss_pred --cCCCCeEEEEECHHHHHHHHHHHHcC--------C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHH
Confidence 33468999999999999999998874 2 24778876552110000 000000 0000001111000
Q ss_pred cCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCc
Q 042745 234 RSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNS 311 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~ 311 (331)
. .. .. .+. .+. |++++||+.|.++| .+..+++ . +++++++|++|.|...
T Consensus 127 -----~-----~~-~~---~i~-~~~-~v~iihg~~De~V~~~~a~~~~~----~-----~~~~~~~ggdH~f~~~---- 177 (190)
T PRK11071 127 -----V-----MQ-ID---PLE-SPD-LIWLLQQTGDEVLDYRQAVAYYA----A-----CRQTVEEGGNHAFVGF---- 177 (190)
T ss_pred -----h-----cC-Cc---cCC-Chh-hEEEEEeCCCCcCCHHHHHHHHH----h-----cceEEECCCCcchhhH----
Confidence 0 00 00 111 333 89999999999998 4444444 1 3456779999988622
Q ss_pred HHHHHHHHHHHHHhh
Q 042745 312 ENARVMLQQIASFFN 326 (331)
Q Consensus 312 ~~~~~~~~~i~~fl~ 326 (331)
++.++.+.+|++
T Consensus 178 ---~~~~~~i~~fl~ 189 (190)
T PRK11071 178 ---ERYFNQIVDFLG 189 (190)
T ss_pred ---HHhHHHHHHHhc
Confidence 778999999985
No 61
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.64 E-value=3.1e-14 Score=112.45 Aligned_cols=175 Identities=19% Similarity=0.251 Sum_probs=120.6
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-----CCCChHHHHHHHHHHHHHhccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-----PVPCAHDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~ 154 (331)
...|+.|.+|--.-..|+..+..... +.+.+.+.|+.++.+|||+-+.. ..-..++|+.++++|++++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~-la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~h----- 99 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQT-LARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARH----- 99 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHH-HHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhC-----
Confidence 57899999998766666665532223 33445677999999999985442 23357899999999999974
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhcc
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYR 234 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
-+..-..|.|+|.|+++|.++|.+.++ +...|.++|.....+
T Consensus 100 -------p~s~~~~l~GfSFGa~Ia~~la~r~~e-------~~~~is~~p~~~~~d------------------------ 141 (210)
T COG2945 100 -------PDSASCWLAGFSFGAYIAMQLAMRRPE-------ILVFISILPPINAYD------------------------ 141 (210)
T ss_pred -------CCchhhhhcccchHHHHHHHHHHhccc-------ccceeeccCCCCchh------------------------
Confidence 333445899999999999999999863 556666665553100
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHH
Q 042745 235 SETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENA 314 (331)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~ 314 (331)
.+ .+...++ |.++++|+.|.+++-...+ ++++. . +.+++..++++|.|.. ..
T Consensus 142 ----------fs------~l~P~P~-~~lvi~g~~Ddvv~l~~~l--~~~~~-~--~~~~i~i~~a~HFF~g------Kl 193 (210)
T COG2945 142 ----------FS------FLAPCPS-PGLVIQGDADDVVDLVAVL--KWQES-I--KITVITIPGADHFFHG------KL 193 (210)
T ss_pred ----------hh------hccCCCC-CceeEecChhhhhcHHHHH--HhhcC-C--CCceEEecCCCceecc------cH
Confidence 00 2222334 9999999999777533222 12222 3 6789999999998773 33
Q ss_pred HHHHHHHHHHhh
Q 042745 315 RVMLQQIASFFN 326 (331)
Q Consensus 315 ~~~~~~i~~fl~ 326 (331)
..+.+.+.+||.
T Consensus 194 ~~l~~~i~~~l~ 205 (210)
T COG2945 194 IELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHhh
Confidence 677788888884
No 62
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.64 E-value=8.4e-15 Score=125.72 Aligned_cols=205 Identities=14% Similarity=0.134 Sum_probs=114.7
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRY 161 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 161 (331)
.|+||++||.+.. .. .|...+..+ + +|.|+++|+|+++....+.. .+.....+++.+...+
T Consensus 2 ~p~vvllHG~~~~---~~--~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~---------- 62 (242)
T PRK11126 2 LPWLVFLHGLLGS---GQ--DWQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS---------- 62 (242)
T ss_pred CCEEEEECCCCCC---hH--HHHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH----------
Confidence 4789999995532 22 255666544 3 79999999999876543321 1333333333333221
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCC------CC------ccCchhhhHHHHHH
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVG------NE------TTDAKHRAFFDGIW 229 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~------~~------~~~~~~~~~~~~~~ 229 (331)
.+.+++.++||||||.+|+.++.+.+.. .++++++.++......... .. .............+
T Consensus 63 ~~~~~~~lvG~S~Gg~va~~~a~~~~~~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (242)
T PRK11126 63 YNILPYWLVGYSLGGRIAMYYACQGLAG-----GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWY 137 (242)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCCcc-----cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHH
Confidence 3357999999999999999999987531 4899998876542211000 00 00000000000000
Q ss_pred H-hhccCCC-----------CCCCCC-----------CCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhc
Q 042745 230 R-MGYRSET-----------NGCDDP-----------WINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKES 286 (331)
Q Consensus 230 ~-~~~~~~~-----------~~~~~~-----------~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~ 286 (331)
. ....... ...... ...+.... .+.++++ |+++++|++|..+. .+++. .
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~-P~lii~G~~D~~~~---~~~~~---~ 209 (242)
T PRK11126 138 QQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRP-ALQALTF-PFYYLCGERDSKFQ---ALAQQ---L 209 (242)
T ss_pred hcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHH-HhhccCC-CeEEEEeCCcchHH---HHHHH---h
Confidence 0 0000000 000000 00000000 4567787 99999999998653 22221 1
Q ss_pred CCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 287 GWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 287 g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
+++++++++++|.+.. +..+++.+.|..||++
T Consensus 210 ----~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 210 ----ALPLHVIPNAGHNAHR-----ENPAAFAASLAQILRL 241 (242)
T ss_pred ----cCeEEEeCCCCCchhh-----hChHHHHHHHHHHHhh
Confidence 4689999999997663 4558899999999975
No 63
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.64 E-value=6.1e-15 Score=127.85 Aligned_cols=207 Identities=14% Similarity=0.053 Sum_probs=117.3
Q ss_pred cEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccC
Q 042745 83 PLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYA 162 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 162 (331)
|.||++||.|. +... |...+..+. + .|.|+.+|+|+++....+.. ..+....+.+.. .
T Consensus 14 ~~ivllHG~~~---~~~~--w~~~~~~L~-~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~--------------~ 71 (256)
T PRK10349 14 VHLVLLHGWGL---NAEV--WRCIDEELS-S-HFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQ--------------Q 71 (256)
T ss_pred CeEEEECCCCC---ChhH--HHHHHHHHh-c-CCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHh--------------c
Confidence 56999999542 3222 556666663 4 69999999999876543321 122233334433 2
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCC--CCCCCCccCc--h--------hhhHHHHHHH
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGS--TPVGNETTDA--K--------HRAFFDGIWR 230 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~--~~~~~~~~~~--~--------~~~~~~~~~~ 230 (331)
..+++.|+||||||.+|+.+|.+.++ .++++|++++..... .......... . .......+..
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTHPE------RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChH------hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 34789999999999999999988765 799999987642211 1101000000 0 0001111110
Q ss_pred hh-ccCCC------------CCCCCCCC----------CCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcC
Q 042745 231 MG-YRSET------------NGCDDPWI----------NPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESG 287 (331)
Q Consensus 231 ~~-~~~~~------------~~~~~~~~----------~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g 287 (331)
.. ..... .....+.. ........+.++++ |+|+++|++|.+++.. ..+.+.+.-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~--~~~~~~~~i 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSM-PFLRLYGYLDGLVPRK--VVPMLDKLW 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCC-CeEEEecCCCccCCHH--HHHHHHHhC
Confidence 00 00000 00000000 00000015667777 9999999999988632 233444432
Q ss_pred CCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 288 WKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 288 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
. ++++.++++++|... .++++++.+.+.+|-++
T Consensus 223 ~--~~~~~~i~~~gH~~~-----~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 223 P--HSESYIFAKAAHAPF-----ISHPAEFCHLLVALKQR 255 (256)
T ss_pred C--CCeEEEeCCCCCCcc-----ccCHHHHHHHHHHHhcc
Confidence 2 679999999999655 45668888888888553
No 64
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.63 E-value=1.5e-14 Score=123.44 Aligned_cols=206 Identities=16% Similarity=0.071 Sum_probs=116.1
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRY 161 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 161 (331)
.|.||++||.| ++... |...+..++ + ++.|+.+|+|+.+...... ..++.+..+.+...
T Consensus 4 ~~~iv~~HG~~---~~~~~--~~~~~~~l~-~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~------------- 62 (245)
T TIGR01738 4 NVHLVLIHGWG---MNAEV--FRCLDEELS-A-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ------------- 62 (245)
T ss_pred CceEEEEcCCC---Cchhh--HHHHHHhhc-c-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-------------
Confidence 47899999843 23322 555555553 4 7999999999887643221 12344445555543
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC--CCCCCccCchh-----------hhHHHHH
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST--PVGNETTDAKH-----------RAFFDGI 228 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~--~~~~~~~~~~~-----------~~~~~~~ 228 (331)
. .+++.|+|||+||.+|+.++.+.++ .++++|++++...... ........... ......+
T Consensus 63 ~-~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (245)
T TIGR01738 63 A-PDPAIWLGWSLGGLVALHIAATHPD------RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERF 135 (245)
T ss_pred C-CCCeEEEEEcHHHHHHHHHHHHCHH------hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 2 2689999999999999999988765 6899998876432211 11000000000 0000001
Q ss_pred HHhh-ccCCCC------------CCCCC---C----CCCCCCC---CCcccCCCCeEEEEEeCCCccchhHHHHHHHHHh
Q 042745 229 WRMG-YRSETN------------GCDDP---W----INPCVEG---SSLASMGCARVLVFVAEKDKLAARGWLYYEKLKE 285 (331)
Q Consensus 229 ~~~~-~~~~~~------------~~~~~---~----~~~~~~~---~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~ 285 (331)
.... ...... ....+ . ....... ..+.++++ |+++++|++|..++... .+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~~--~~~~~~ 212 (245)
T TIGR01738 136 LALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISV-PFLRLYGYLDGLVPAKV--VPYLDK 212 (245)
T ss_pred HHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCC-CEEEEeecCCcccCHHH--HHHHHH
Confidence 0000 000000 00000 0 0000000 04566777 99999999999886221 122222
Q ss_pred cCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 286 SGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 286 ~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
.-. +++++++++++|... .++.+++.+.+.+|+
T Consensus 213 ~~~--~~~~~~~~~~gH~~~-----~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 213 LAP--HSELYIFAKAAHAPF-----LSHAEAFCALLVAFK 245 (245)
T ss_pred hCC--CCeEEEeCCCCCCcc-----ccCHHHHHHHHHhhC
Confidence 222 678999999999755 345688899998886
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.63 E-value=7.2e-14 Score=120.51 Aligned_cols=222 Identities=15% Similarity=0.130 Sum_probs=131.3
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-------CC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-------VP 132 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-------~~ 132 (331)
.+.+...++.|.+. +++|+||++||.|........ .+...+..++ +.||.|+.+|||++++.. +.
T Consensus 9 ~g~~~~~~~~p~~~------~~~~~VlllHG~g~~~~~~~~-~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~ 80 (266)
T TIGR03101 9 HGFRFCLYHPPVAV------GPRGVVIYLPPFAEEMNKSRR-MVALQARAFA-AGGFGVLQIDLYGCGDSAGDFAAARWD 80 (266)
T ss_pred CCcEEEEEecCCCC------CCceEEEEECCCcccccchhH-HHHHHHHHHH-HCCCEEEEECCCCCCCCCCccccCCHH
Confidence 44566666666554 457999999995532221111 1334456665 459999999999986542 22
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCC
Q 042745 133 CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPV 212 (331)
Q Consensus 133 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~ 212 (331)
...+|+..+++|+++. +.++|+|+||||||.+|+.++.+.++ .++++|+++|+.......
T Consensus 81 ~~~~Dv~~ai~~L~~~--------------~~~~v~LvG~SmGG~vAl~~A~~~p~------~v~~lVL~~P~~~g~~~l 140 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQ--------------GHPPVTLWGLRLGALLALDAANPLAA------KCNRLVLWQPVVSGKQQL 140 (266)
T ss_pred HHHHHHHHHHHHHHhc--------------CCCCEEEEEECHHHHHHHHHHHhCcc------ccceEEEeccccchHHHH
Confidence 3568888999999763 24689999999999999999988754 799999999987532211
Q ss_pred CCCccCchhhhHHH-HHHHhhccCCCCCCCCC-----------------CCCCCCCCC----CcccC--CCCeEEEEEeC
Q 042745 213 GNETTDAKHRAFFD-GIWRMGYRSETNGCDDP-----------------WINPCVEGS----SLASM--GCARVLVFVAE 268 (331)
Q Consensus 213 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~----~l~~~--~~~Pvli~~G~ 268 (331)
. ..++ +......... ...... .+++-...+ ++... +...++++.-.
T Consensus 141 ~---------~~lrl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 210 (266)
T TIGR03101 141 Q---------QFLRLRLVARRLGGE-SAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVR 210 (266)
T ss_pred H---------HHHHHHHHHHhcccc-ccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEec
Confidence 0 0000 0111111111 000000 000000000 22211 01267777664
Q ss_pred CC---ccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHH
Q 042745 269 KD---KLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASF 324 (331)
Q Consensus 269 ~D---~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 324 (331)
-+ ...+....+.+++++.|+ .++...++|. .|+. .+...+..+.++...+.
T Consensus 211 ~~~~~~~~~~~~~l~~~~~~~g~--~v~~~~~~~~--~~~~-~~~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 211 PEEGATLSPVFSRLGEQWVQSGV--EVTVDLVPGP--AFWQ-TQEIEEAPELIARTTAL 264 (266)
T ss_pred cccCCCCCHHHHHHHHHHHHcCC--eEeeeecCCc--hhhc-chhhhHhHHHHHHHHhh
Confidence 32 344577889999999999 9999999986 5552 23344555555554443
No 66
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.63 E-value=6.6e-15 Score=134.57 Aligned_cols=210 Identities=19% Similarity=0.189 Sum_probs=120.7
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC---CChHHHHHHHHHHHHHhccCCCCCc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV---PCAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~---~~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
++.|+||++||.+ ++... |......+. + +|.|+++|+++++.... ...++++.+.+..+.+.
T Consensus 129 ~~~~~vl~~HG~~---~~~~~--~~~~~~~l~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-------- 193 (371)
T PRK14875 129 GDGTPVVLIHGFG---GDLNN--WLFNHAALA-A-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA-------- 193 (371)
T ss_pred CCCCeEEEECCCC---Cccch--HHHHHHHHh-c-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh--------
Confidence 3468999999854 33322 555555553 4 59999999999876522 23455555555554443
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc-------cCch---------
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET-------TDAK--------- 220 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~-------~~~~--------- 220 (331)
++.+++.|+|||+||.+|+.+|.+.+. .++++|+++|............ ....
T Consensus 194 -----~~~~~~~lvG~S~Gg~~a~~~a~~~~~------~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (371)
T PRK14875 194 -----LGIERAHLVGHSMGGAVALRLAARAPQ------RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLF 262 (371)
T ss_pred -----cCCccEEEEeechHHHHHHHHHHhCch------heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHh
Confidence 556789999999999999999988754 7999999987632211110000 0000
Q ss_pred ------hhhHHHHHHHhhccCC--------CCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhc
Q 042745 221 ------HRAFFDGIWRMGYRSE--------TNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKES 286 (331)
Q Consensus 221 ------~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~ 286 (331)
........+....... .................+.++++ |+++++|++|.+++.. ..+.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~vp~~--~~~~l~-- 337 (371)
T PRK14875 263 ADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAI-PVLVIWGEQDRIIPAA--HAQGLP-- 337 (371)
T ss_pred cChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCC-CEEEEEECCCCccCHH--HHhhcc--
Confidence 0000000000000000 00000000000000003456677 9999999999988632 122221
Q ss_pred CCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 287 GWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 287 g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
. .++++++++++|... .++.+++.+.|.+||+++
T Consensus 338 -~--~~~~~~~~~~gH~~~-----~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 338 -D--GVAVHVLPGAGHMPQ-----MEAAADVNRLLAEFLGKA 371 (371)
T ss_pred -C--CCeEEEeCCCCCChh-----hhCHHHHHHHHHHHhccC
Confidence 1 578999999999655 345578888999999764
No 67
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.62 E-value=1.5e-14 Score=131.30 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=82.6
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCC-----Cc-hhHHHH---HHHHhcCCeEE
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPF-----SP-FYHSYL---NALVSACNVVA 118 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~-----~~-~~~~~~---~~la~~~G~~v 118 (331)
+++++.++++-++..+....+-+.+. ...|+||++||-+...-... .+ .|...+ ..+. ..+|.|
T Consensus 3 ~~~~~~~g~~~~~~~~~y~~~g~~~~------~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~v 75 (351)
T TIGR01392 3 KPLTLESGGVLSDVRVAYETYGTLNA------ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAID-TDRYFV 75 (351)
T ss_pred CceecCCCCccCCceEEEEeccccCC------CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcC-CCceEE
Confidence 45566665555566666666655332 23579999999443210000 00 122222 1332 358999
Q ss_pred EEecCCC--CCCCC---------------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCe-EEEeeCCchHHHHH
Q 042745 119 VSVDYRR--APENP---------------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQR-VFFAGDSAGANIAH 180 (331)
Q Consensus 119 v~~dyr~--~~~~~---------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~~Al 180 (331)
+++|+|+ ++... .+..++|....+..+.+. ...++ +.|+||||||.+|+
T Consensus 76 i~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------l~~~~~~~l~G~S~Gg~ia~ 142 (351)
T TIGR01392 76 VCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH-------------LGIEQIAAVVGGSMGGMQAL 142 (351)
T ss_pred EEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH-------------cCCCCceEEEEECHHHHHHH
Confidence 9999998 32211 123456666555555544 34467 99999999999999
Q ss_pred HHHHhhcccccCCCceeEEEEecccc
Q 042745 181 HMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 181 ~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
.++.++++ .++++|++++..
T Consensus 143 ~~a~~~p~------~v~~lvl~~~~~ 162 (351)
T TIGR01392 143 EWAIDYPE------RVRAIVVLATSA 162 (351)
T ss_pred HHHHHChH------hhheEEEEccCC
Confidence 99999876 799999987654
No 68
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.62 E-value=3.1e-14 Score=132.21 Aligned_cols=117 Identities=15% Similarity=0.232 Sum_probs=76.8
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHH-HHHHHH--hcCCeEEEEecCCCCCCCCCC----
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHS-YLNALV--SACNVVAVSVDYRRAPENPVP---- 132 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~-~~~~la--~~~G~~vv~~dyr~~~~~~~~---- 132 (331)
+..+.+....|.+. ..+|.||++||.+. +... |.. .+..++ .+.+|.|+++|+++++....+
T Consensus 185 ~~~l~~~~~gp~~~------~~k~~VVLlHG~~~---s~~~--W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ 253 (481)
T PLN03087 185 NESLFVHVQQPKDN------KAKEDVLFIHGFIS---SSAF--WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSL 253 (481)
T ss_pred CeEEEEEEecCCCC------CCCCeEEEECCCCc---cHHH--HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCc
Confidence 33455555555543 34588999999543 2221 332 223333 135899999999998764432
Q ss_pred ChHHHHHHHH-HHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 133 CAHDDSWAAI-KWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 133 ~~~~d~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
..+++..+.+ ..+.+. .+.+++.|+||||||.+|+.++.++++ .++++|+++|..
T Consensus 254 ytl~~~a~~l~~~ll~~-------------lg~~k~~LVGhSmGG~iAl~~A~~~Pe------~V~~LVLi~~~~ 309 (481)
T PLN03087 254 YTLREHLEMIERSVLER-------------YKVKSFHIVAHSLGCILALALAVKHPG------AVKSLTLLAPPY 309 (481)
T ss_pred CCHHHHHHHHHHHHHHH-------------cCCCCEEEEEECHHHHHHHHHHHhChH------hccEEEEECCCc
Confidence 2344444444 234443 445789999999999999999999876 799999998644
No 69
>PRK07581 hypothetical protein; Validated
Probab=99.62 E-value=2.9e-14 Score=128.83 Aligned_cols=129 Identities=16% Similarity=0.076 Sum_probs=78.5
Q ss_pred ccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHH---HHHHhcCCeEEEEec
Q 042745 46 DSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYL---NALVSACNVVAVSVD 122 (331)
Q Consensus 46 ~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~---~~la~~~G~~vv~~d 122 (331)
...++++.++.+-++..+....+-+.+ .++.|+||++||+++.. .. +...+ ..+. ..+|.|+++|
T Consensus 11 ~~~~~~~~~g~~~~~~~l~y~~~G~~~------~~~~~~vll~~~~~~~~---~~--~~~~~~~~~~l~-~~~~~vi~~D 78 (339)
T PRK07581 11 DLGDVELQSGATLPDARLAYKTYGTLN------AAKDNAILYPTWYSGTH---QD--NEWLIGPGRALD-PEKYFIIIPN 78 (339)
T ss_pred eeCCeEecCCCCcCCceEEEEecCccC------CCCCCEEEEeCCCCCCc---cc--chhhccCCCccC-cCceEEEEec
Confidence 345667766544444444433332211 13457777777755422 11 11111 1333 3489999999
Q ss_pred CCCCCCCCCCC---------------hHHHHHHHHHHHHHhccCCCCCccccccCCCCeE-EEeeCCchHHHHHHHHHhh
Q 042745 123 YRRAPENPVPC---------------AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRV-FFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 123 yr~~~~~~~~~---------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i-~l~G~S~GG~~Al~~a~~~ 186 (331)
+|+++....+. ..+|+......+.+. ...+++ .|+||||||.+|+.+|.++
T Consensus 79 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------lgi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 79 MFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK-------------FGIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH-------------hCCCceEEEEEeCHHHHHHHHHHHHC
Confidence 99987653221 234555444555554 345784 7899999999999999999
Q ss_pred cccccCCCceeEEEEeccc
Q 042745 187 GREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 187 ~~~~~~~~~i~~~i~~~p~ 205 (331)
++ +++++|++++.
T Consensus 146 P~------~V~~Lvli~~~ 158 (339)
T PRK07581 146 PD------MVERAAPIAGT 158 (339)
T ss_pred HH------HHhhheeeecC
Confidence 86 79999988654
No 70
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=2.9e-14 Score=125.63 Aligned_cols=99 Identities=23% Similarity=0.347 Sum_probs=72.7
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----ChHHHHHHHHHHHHHhccCCCCCcc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP----CAHDDSWAAIKWVASHVNGSGPEDW 157 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~ 157 (331)
.|+|||+||.+. +.. .|...+..+ .+ +|.|+++|+++++....+ ..+++..+.+..+.+.
T Consensus 34 ~~~iv~lHG~~~---~~~--~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~--------- 97 (286)
T PRK03204 34 GPPILLCHGNPT---WSF--LYRDIIVAL-RD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH--------- 97 (286)
T ss_pred CCEEEEECCCCc---cHH--HHHHHHHHH-hC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH---------
Confidence 478999999541 111 244555554 34 799999999998765432 3467777777777765
Q ss_pred ccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 158 LNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 158 ~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
.+.+++.++|||+||.+|+.++.+.++ .++++|+.++..
T Consensus 98 ----~~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~ 136 (286)
T PRK03204 98 ----LGLDRYLSMGQDWGGPISMAVAVERAD------RVRGVVLGNTWF 136 (286)
T ss_pred ----hCCCCEEEEEECccHHHHHHHHHhChh------heeEEEEECccc
Confidence 445789999999999999999988765 799999887654
No 71
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.62 E-value=9.3e-14 Score=117.30 Aligned_cols=130 Identities=21% Similarity=0.382 Sum_probs=96.4
Q ss_pred ceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHH
Q 042745 62 ALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAA 141 (331)
Q Consensus 62 ~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~ 141 (331)
..++.+|.|... +.+|+|||+||-. ...+ .|..+++++| +.||+||.+|+...........++++...
T Consensus 3 p~~l~v~~P~~~------g~yPVv~f~~G~~-~~~s----~Ys~ll~hvA-ShGyIVV~~d~~~~~~~~~~~~~~~~~~v 70 (259)
T PF12740_consen 3 PKPLLVYYPSSA------GTYPVVLFLHGFL-LINS----WYSQLLEHVA-SHGYIVVAPDLYSIGGPDDTDEVASAAEV 70 (259)
T ss_pred CCCeEEEecCCC------CCcCEEEEeCCcC-CCHH----HHHHHHHHHH-hCceEEEEecccccCCCCcchhHHHHHHH
Confidence 357889999887 7899999999844 2111 3788888887 55999999995544334555678899999
Q ss_pred HHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 142 IKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 142 ~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
++|+.+......+ .....|.+||+|+|||.||-+|..+++....... ..+++++|++.|+-.
T Consensus 71 i~Wl~~~L~~~l~---~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~-~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 71 IDWLAKGLESKLP---LGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL-DLRFSALILLDPVDG 132 (259)
T ss_pred HHHHHhcchhhcc---ccccccccceEEeeeCCCCHHHHHHHhhhccccc-ccceeEEEEeccccc
Confidence 9999886543211 0112588999999999999999999988743221 237999999998873
No 72
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.6e-13 Score=121.97 Aligned_cols=249 Identities=12% Similarity=0.079 Sum_probs=152.1
Q ss_pred cccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC
Q 042745 45 VDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR 124 (331)
Q Consensus 45 v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr 124 (331)
..++-++++ ||+.+.++++.+...+........|+||++|| ..|+... .|...+...+.+.||.|++++-|
T Consensus 93 y~Reii~~~-----DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpG---ltg~S~~-~YVr~lv~~a~~~G~r~VVfN~R 163 (409)
T KOG1838|consen 93 YTREIIKTS-----DGGTVTLDWVENPDSRCRTDDGTDPIVVILPG---LTGGSHE-SYVRHLVHEAQRKGYRVVVFNHR 163 (409)
T ss_pred ceeEEEEeC-----CCCEEEEeeccCcccccCCCCCCCcEEEEecC---CCCCChh-HHHHHHHHHHHhCCcEEEEECCC
Confidence 344445554 48999999998877632222467899999998 4444433 35566666677889999999999
Q ss_pred CCCCCCC-------CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCcee
Q 042745 125 RAPENPV-------PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVA 197 (331)
Q Consensus 125 ~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~ 197 (331)
+.+.... -...+|+..++++++.. +...+++.+|.||||++...++.+..+.. +.+.
T Consensus 164 G~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~-------------~P~a~l~avG~S~Gg~iL~nYLGE~g~~~---~l~~ 227 (409)
T KOG1838|consen 164 GLGGSKLTTPRLFTAGWTEDLREVVNHIKKR-------------YPQAPLFAVGFSMGGNILTNYLGEEGDNT---PLIA 227 (409)
T ss_pred CCCCCccCCCceeecCCHHHHHHHHHHHHHh-------------CCCCceEEEEecchHHHHHHHhhhccCCC---Ccee
Confidence 9765432 23569999999999997 55578999999999999999888776543 2566
Q ss_pred EEEEecccccC-CCCCCCCccCc-----------------------------------hhhhHHHH-HHHhhccCCCCCC
Q 042745 198 GIVLVHPYFWG-STPVGNETTDA-----------------------------------KHRAFFDG-IWRMGYRSETNGC 240 (331)
Q Consensus 198 ~~i~~~p~~~~-~~~~~~~~~~~-----------------------------------~~~~~~~~-~~~~~~~~~~~~~ 240 (331)
|+.+.+||-.. ........... .+.+..+. +....++-...+.
T Consensus 228 a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~de 307 (409)
T KOG1838|consen 228 AVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDE 307 (409)
T ss_pred EEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHH
Confidence 77777787532 00000000000 00111111 1111111000000
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchh-HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 241 DDPWINPCVEGSSLASMGCARVLVFVAEKDKLAAR-GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 241 ~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~-~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
-....|+.. .+.++.. |+|++++.+|++++. +.-..+..++. ++-+.+-..++|.=.+.. ..+....+++
T Consensus 308 YY~~aSs~~---~v~~I~V-P~L~ina~DDPv~p~~~ip~~~~~~np----~v~l~~T~~GGHlgfleg-~~p~~~~w~~ 378 (409)
T KOG1838|consen 308 YYKKASSSN---YVDKIKV-PLLCINAADDPVVPEEAIPIDDIKSNP----NVLLVITSHGGHLGFLEG-LWPSARTWMD 378 (409)
T ss_pred HHhhcchhh---hcccccc-cEEEEecCCCCCCCcccCCHHHHhcCC----cEEEEEeCCCceeeeecc-CCCccchhHH
Confidence 111123322 6777887 999999999999984 44443333222 677888888899644332 3335556666
Q ss_pred H-HHHHhhc
Q 042745 320 Q-IASFFNL 327 (331)
Q Consensus 320 ~-i~~fl~~ 327 (331)
+ +.+|+..
T Consensus 379 ~~l~ef~~~ 387 (409)
T KOG1838|consen 379 KLLVEFLGN 387 (409)
T ss_pred HHHHHHHHH
Confidence 6 6677653
No 73
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.60 E-value=6.2e-15 Score=123.66 Aligned_cols=176 Identities=19% Similarity=0.187 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCC
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGN 214 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~ 214 (331)
++-...+++||+++.. ++.++|+|+|.|.||-+||.+|.+.+ .|+++|+++|..........
T Consensus 3 LEyfe~Ai~~L~~~p~-----------v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~ 64 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE-----------VDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGF 64 (213)
T ss_dssp CHHHHHHHHHHHCSTT-----------B--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEE
T ss_pred hHHHHHHHHHHHhCCC-----------CCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhc
Confidence 4567789999999864 88899999999999999999999987 69999999875432221110
Q ss_pred CccC--c--h---hhhHHHHHHHhhccCCCCCCCCCCCCCCCCCC--CcccCCCCeEEEEEeCCCccch---hHHHHHHH
Q 042745 215 ETTD--A--K---HRAFFDGIWRMGYRSETNGCDDPWINPCVEGS--SLASMGCARVLVFVAEKDKLAA---RGWLYYEK 282 (331)
Q Consensus 215 ~~~~--~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~Pvli~~G~~D~~v~---~~~~~~~~ 282 (331)
.... . . ................ ...... .......+ .+.++++ |+|++.|++|.+.| .++.+.++
T Consensus 65 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~a~IpvE~i~~-piLli~g~dD~~WpS~~~a~~i~~r 141 (213)
T PF08840_consen 65 YRDSSKPLPYLPFDISKFSWNEPGLLRSR-YAFELA-DDKAVEEARIPVEKIKG-PILLISGEDDQIWPSSEMAEQIEER 141 (213)
T ss_dssp ETTE--EE----B-GGG-EE-TTS-EE-T-T-B--T-TTGGGCCCB--GGG--S-EEEEEEETT-SSS-HHHHHHHHHHH
T ss_pred ccCCCccCCcCCcChhhceecCCcceehh-hhhhcc-cccccccccccHHHcCC-CEEEEEeCCCCccchHHHHHHHHHH
Confidence 0000 0 0 0000000000000000 000000 00001111 5777888 99999999999987 56677889
Q ss_pred HHhcCCCcceEEEEeCCCceeeeec-CCC-----------------c-----HHHHHHHHHHHHHhhccCCC
Q 042745 283 LKESGWKGRAEIVETKGESHVFHLF-NPN-----------------S-----ENARVMLQQIASFFNLQDKP 331 (331)
Q Consensus 283 l~~~g~~~~~~~~~~~g~~H~~~~~-~~~-----------------~-----~~~~~~~~~i~~fl~~~~~~ 331 (331)
|++++.+.+++++.|+++||.+..- .|. . ...++.++++++||++|+.+
T Consensus 142 L~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 142 LKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp HHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999875568999999999987421 000 1 24578999999999999863
No 74
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.60 E-value=8.8e-15 Score=123.10 Aligned_cols=188 Identities=20% Similarity=0.224 Sum_probs=109.0
Q ss_pred EEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-----ChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 85 LVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-----CAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 85 vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
||++||.+... . .|..++..+ ++ ||.|+++|+|+.+....+ ..+++....+..+.+.
T Consensus 1 vv~~hG~~~~~---~--~~~~~~~~l-~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~----------- 62 (228)
T PF12697_consen 1 VVFLHGFGGSS---E--SWDPLAEAL-AR-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA----------- 62 (228)
T ss_dssp EEEE-STTTTG---G--GGHHHHHHH-HT-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-----------
T ss_pred eEEECCCCCCH---H--HHHHHHHHH-hC-CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-----------
Confidence 79999965432 2 266777777 44 999999999998765432 2334444433334343
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCC--C---CCccCch------hhhHHHHH
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPV--G---NETTDAK------HRAFFDGI 228 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~--~---~~~~~~~------~~~~~~~~ 228 (331)
...+++.|+|||+||.+++.++.+.++ .++++|+++|........ . ....... ........
T Consensus 63 --~~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T PF12697_consen 63 --LGIKKVILVGHSMGGMIALRLAARYPD------RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRF 134 (228)
T ss_dssp --TTTSSEEEEEETHHHHHHHHHHHHSGG------GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --ccccccccccccccccccccccccccc------ccccceeecccccccccccccccchhhhhhhhccccccccccccc
Confidence 344789999999999999999998875 799999999887432110 0 0000000 00000000
Q ss_pred HHhhccC-CC---CCCC--------C--CCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEE
Q 042745 229 WRMGYRS-ET---NGCD--------D--PWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEI 294 (331)
Q Consensus 229 ~~~~~~~-~~---~~~~--------~--~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~ 294 (331)
+...... .. .... . ........ .+..+++ |+++++|++|.+++ ....+.+.+... ++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-pvl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~ 207 (228)
T PF12697_consen 135 FYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSE--ALPRIKV-PVLVIHGEDDPIVP--PESAEELADKLP--NAEL 207 (228)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHGSSS-EEEEEEETTSSSSH--HHHHHHHHHHST--TEEE
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccCC-CeEEeecCCCCCCC--HHHHHHHHHHCC--CCEE
Confidence 0000000 00 0000 0 00000000 4556666 99999999999987 344455554433 7899
Q ss_pred EEeCCCceeee
Q 042745 295 VETKGESHVFH 305 (331)
Q Consensus 295 ~~~~g~~H~~~ 305 (331)
+++++++|...
T Consensus 208 ~~~~~~gH~~~ 218 (228)
T PF12697_consen 208 VVIPGAGHFLF 218 (228)
T ss_dssp EEETTSSSTHH
T ss_pred EEECCCCCccH
Confidence 99999999755
No 75
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=1.1e-14 Score=120.76 Aligned_cols=224 Identities=17% Similarity=0.107 Sum_probs=143.8
Q ss_pred CCCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEE
Q 042745 41 PKTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVS 120 (331)
Q Consensus 41 ~~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~ 120 (331)
..+.++.-+++|.+ -++.+|.+++..|+.. .++.|.||-.||-+...|. +..++ .++. .||+|+.
T Consensus 50 ~~~~ve~ydvTf~g---~~g~rI~gwlvlP~~~-----~~~~P~vV~fhGY~g~~g~-----~~~~l-~wa~-~Gyavf~ 114 (321)
T COG3458 50 TLPRVEVYDVTFTG---YGGARIKGWLVLPRHE-----KGKLPAVVQFHGYGGRGGE-----WHDML-HWAV-AGYAVFV 114 (321)
T ss_pred cCCceEEEEEEEec---cCCceEEEEEEeeccc-----CCccceEEEEeeccCCCCC-----ccccc-cccc-cceeEEE
Confidence 34678888999986 5588999999999987 4799999999985433322 12222 3444 4999999
Q ss_pred ecCCCCCCC-----------C-----------------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeC
Q 042745 121 VDYRRAPEN-----------P-----------------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGD 172 (331)
Q Consensus 121 ~dyr~~~~~-----------~-----------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~ 172 (331)
+|.|+-+.. . +...+.|+..+++-+.+... +|.+||++.|.
T Consensus 115 MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~-----------vde~Ri~v~G~ 183 (321)
T COG3458 115 MDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDE-----------VDEERIGVTGG 183 (321)
T ss_pred EecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCc-----------cchhheEEecc
Confidence 999964211 1 12235789999998887754 89999999999
Q ss_pred CchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCC
Q 042745 173 SAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGS 252 (331)
Q Consensus 173 S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
|.||.+|+.++.-.+ +|+++++.+|++..-...... ........+..+.+..-+.. ......++-+...
T Consensus 184 SqGGglalaaaal~~-------rik~~~~~~Pfl~df~r~i~~-~~~~~ydei~~y~k~h~~~e--~~v~~TL~yfD~~- 252 (321)
T COG3458 184 SQGGGLALAAAALDP-------RIKAVVADYPFLSDFPRAIEL-ATEGPYDEIQTYFKRHDPKE--AEVFETLSYFDIV- 252 (321)
T ss_pred ccCchhhhhhhhcCh-------hhhcccccccccccchhheee-cccCcHHHHHHHHHhcCchH--HHHHHHHhhhhhh-
Confidence 999999999887765 799999999999754433222 11122223333333221110 0000001111000
Q ss_pred Ccc-cCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeee
Q 042745 253 SLA-SMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFH 305 (331)
Q Consensus 253 ~l~-~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~ 305 (331)
+++ .++. |+|+..|--|.+++.+..|+..-.-.+ ..++.+|+.-.|.-.
T Consensus 253 n~A~RiK~-pvL~svgL~D~vcpPstqFA~yN~l~~---~K~i~iy~~~aHe~~ 302 (321)
T COG3458 253 NLAARIKV-PVLMSVGLMDPVCPPSTQFAAYNALTT---SKTIEIYPYFAHEGG 302 (321)
T ss_pred hHHHhhcc-ceEEeecccCCCCCChhhHHHhhcccC---CceEEEeeccccccC
Confidence 221 2444 999999999999986666544333222 346777777779533
No 76
>PLN02578 hydrolase
Probab=99.59 E-value=1.4e-13 Score=124.96 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=66.5
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCC---hHHH-HHHHHHHHHHhccCCCCCcc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPC---AHDD-SWAAIKWVASHVNGSGPEDW 157 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~---~~~d-~~~~~~~l~~~~~~~~~~~~ 157 (331)
.|.||++||.+. +.. .|...+..++ + +|.|+.+|+++++....+. ..++ +..+.+++...
T Consensus 86 g~~vvliHG~~~---~~~--~w~~~~~~l~-~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~--------- 149 (354)
T PLN02578 86 GLPIVLIHGFGA---SAF--HWRYNIPELA-K-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV--------- 149 (354)
T ss_pred CCeEEEECCCCC---CHH--HHHHHHHHHh-c-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh---------
Confidence 466899998442 222 2445555554 4 7999999999987654332 2222 22344444432
Q ss_pred ccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 158 LNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 158 ~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
..+++.|+|||+||.+|+.+|.+.++ .++++|++++.
T Consensus 150 -----~~~~~~lvG~S~Gg~ia~~~A~~~p~------~v~~lvLv~~~ 186 (354)
T PLN02578 150 -----VKEPAVLVGNSLGGFTALSTAVGYPE------LVAGVALLNSA 186 (354)
T ss_pred -----ccCCeEEEEECHHHHHHHHHHHhChH------hcceEEEECCC
Confidence 23689999999999999999999876 79999998764
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.57 E-value=1.2e-13 Score=132.29 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=93.3
Q ss_pred CCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-----C
Q 042745 57 SNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-----V 131 (331)
Q Consensus 57 ~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-----~ 131 (331)
.+|+..+.+++|.|++. ++.|+||++||.|........ ........++ +.||.|+.+|+|+.+... +
T Consensus 3 ~~DG~~L~~~~~~P~~~------~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~~~~ 74 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGG------GPVPVILSRTPYGKDAGLRWG-LDKTEPAWFV-AQGYAVVIQDTRGRGASEGEFDLL 74 (550)
T ss_pred CCCCCEEEEEEEecCCC------CCCCEEEEecCCCCchhhccc-cccccHHHHH-hCCcEEEEEeccccccCCCceEec
Confidence 36788999999999765 578999999986643221000 0112234454 559999999999876532 2
Q ss_pred -CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 132 -PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 132 -~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
....+|+.++++|+..+. | .+ .+|+++|+|+||.+++.+|...+. .+++++..+++.+.
T Consensus 75 ~~~~~~D~~~~i~~l~~q~-------~----~~-~~v~~~G~S~GG~~a~~~a~~~~~------~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 75 GSDEAADGYDLVDWIAKQP-------W----CD-GNVGMLGVSYLAVTQLLAAVLQPP------ALRAIAPQEGVWDL 134 (550)
T ss_pred CcccchHHHHHHHHHHhCC-------C----CC-CcEEEEEeChHHHHHHHHhccCCC------ceeEEeecCcccch
Confidence 567899999999998753 2 34 699999999999999999987653 79999988877653
No 78
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.57 E-value=3.2e-13 Score=122.93 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=71.1
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-------ChHHHHHHHHHHHHHhccCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-------CAHDDSWAAIKWVASHVNGSG 153 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~ 153 (331)
..|+||++||.+. +.. .|...+..++ + +|.|+++|+++++....+ ..+++....+..+.+.
T Consensus 126 ~~~~ivllHG~~~---~~~--~w~~~~~~L~-~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~----- 193 (383)
T PLN03084 126 NNPPVLLIHGFPS---QAY--SYRKVLPVLS-K-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE----- 193 (383)
T ss_pred CCCeEEEECCCCC---CHH--HHHHHHHHHh-c-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-----
Confidence 4689999998542 222 2556666654 4 899999999998754322 2344444444444333
Q ss_pred CCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 154 PEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 154 ~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
...+++.|+|||+||.+|+.++.++++ .++++|+++|..
T Consensus 194 --------l~~~~~~LvG~s~GG~ia~~~a~~~P~------~v~~lILi~~~~ 232 (383)
T PLN03084 194 --------LKSDKVSLVVQGYFSPPVVKYASAHPD------KIKKLILLNPPL 232 (383)
T ss_pred --------hCCCCceEEEECHHHHHHHHHHHhChH------hhcEEEEECCCC
Confidence 334689999999999999999998875 799999999865
No 79
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.57 E-value=1.2e-12 Score=112.72 Aligned_cols=100 Identities=18% Similarity=0.280 Sum_probs=69.1
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCCh-----HHHHHHHHHHHHHhccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCA-----HDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~-----~~d~~~~~~~l~~~~~~~~~ 154 (331)
+..|+|+++||-. .... .|+..+..++ ..||.|+++|.|+.+..+-|.. +.-+..-+..+.+.
T Consensus 42 ~~gP~illlHGfP----e~wy-swr~q~~~la-~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~------ 109 (322)
T KOG4178|consen 42 GDGPIVLLLHGFP----ESWY-SWRHQIPGLA-SRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH------ 109 (322)
T ss_pred CCCCEEEEEccCC----ccch-hhhhhhhhhh-hcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH------
Confidence 6789999999832 2111 1445555665 5589999999999876554433 22222222222222
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
+..++++++||++|+.+|..++..+++ +++++++++-
T Consensus 110 -------Lg~~k~~lvgHDwGaivaw~la~~~Pe------rv~~lv~~nv 146 (322)
T KOG4178|consen 110 -------LGLKKAFLVGHDWGAIVAWRLALFYPE------RVDGLVTLNV 146 (322)
T ss_pred -------hccceeEEEeccchhHHHHHHHHhChh------hcceEEEecC
Confidence 224899999999999999999999987 7999998763
No 80
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=7.8e-14 Score=120.39 Aligned_cols=112 Identities=18% Similarity=0.226 Sum_probs=78.2
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
..+..+|++||-|...+. |..-+..++. ...|.++|..+.+...-|..-.|...+..|..+..+++..
T Consensus 88 ~~~~plVliHGyGAg~g~-----f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~----- 155 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGL-----FFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRK----- 155 (365)
T ss_pred cCCCcEEEEeccchhHHH-----HHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHH-----
Confidence 567789999995532222 4555667764 7899999998877655554443333333344433332210
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
..+.+++.|+|||+||++|..+|+++++ +|+-+||++||-....
T Consensus 156 -~~~L~KmilvGHSfGGYLaa~YAlKyPe------rV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 156 -KMGLEKMILVGHSFGGYLAAKYALKYPE------RVEKLILVSPWGFPEK 199 (365)
T ss_pred -HcCCcceeEeeccchHHHHHHHHHhChH------hhceEEEecccccccC
Confidence 0456799999999999999999999987 8999999999876553
No 81
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.56 E-value=4e-13 Score=123.02 Aligned_cols=69 Identities=19% Similarity=0.140 Sum_probs=54.5
Q ss_pred CcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeC-CCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 253 SLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETK-GESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 253 ~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~-g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
.+.++++ |+|+++|++|.+++ .++.+++.+...+. .+++.+++ +++|... .++.+++.+.+.+||++..
T Consensus 304 ~l~~I~~-PtLvI~G~~D~~~p~~~~~~la~~i~~a~~--~~~l~~i~~~~GH~~~-----le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 304 ALARIKA-RFLVVSFTSDWLFPPARSREIVDALLAAGA--DVSYAEIDSPYGHDAF-----LLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHhcCCC-CEEEEEECCccccCHHHHHHHHHHHHhcCC--CeEEEEeCCCCCchhH-----hcCHHHHHHHHHHHHHhhh
Confidence 4567787 99999999998875 56778888888765 67888775 8999755 3455788999999998753
No 82
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.56 E-value=2e-14 Score=120.51 Aligned_cols=174 Identities=21% Similarity=0.211 Sum_probs=111.6
Q ss_pred CCceEEEEeecCCCCCCCCCCCc-cEEEEEcCCcccccCCCCchhH---HHHHHHHhcCCeEEEEecCCCC---CCCCCC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKL-PLLVYIHGGGFCIETPFSPFYH---SYLNALVSACNVVAVSVDYRRA---PENPVP 132 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~-p~vv~~HGgg~~~g~~~~~~~~---~~~~~la~~~G~~vv~~dyr~~---~~~~~~ 132 (331)
+..++.++|.|++. ++.++. |+|||+||+|- .|+...-... ..+.....+.+|-|++|.|.-- .+....
T Consensus 171 gneLkYrly~Pkdy---~pdkky~PLvlfLHgagq-~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~ 246 (387)
T COG4099 171 GNELKYRLYTPKDY---APDKKYYPLVLFLHGAGQ-GGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTL 246 (387)
T ss_pred CceeeEEEeccccc---CCCCccccEEEEEecCCC-CCchhhhhhhcCccceeeecccCceEEEcccccccccccccccc
Confidence 77899999999998 455666 99999999884 3443210000 0111111233556666665421 111112
Q ss_pred ChHHHHHHHHH-HHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 133 CAHDDSWAAIK-WVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 133 ~~~~d~~~~~~-~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
..+.-..+.++ -|.++.. +|.+||.+.|.|+||+.++.++.+.++ .+++.+++++--+.
T Consensus 247 ~~l~~~idli~~vlas~yn-----------ID~sRIYviGlSrG~~gt~al~~kfPd------fFAaa~~iaG~~d~--- 306 (387)
T COG4099 247 LYLIEKIDLILEVLASTYN-----------IDRSRIYVIGLSRGGFGTWALAEKFPD------FFAAAVPIAGGGDR--- 306 (387)
T ss_pred hhHHHHHHHHHHHHhhccC-----------cccceEEEEeecCcchhhHHHHHhCch------hhheeeeecCCCch---
Confidence 22333333333 4444432 999999999999999999999999987 78999988754321
Q ss_pred CCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCC
Q 042745 212 VGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWK 289 (331)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~ 289 (331)
....+ .+++ .|++++|+.+|.++| .++-.+++|+..+.
T Consensus 307 ------------------------------v~lv~------~lk~---~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~- 346 (387)
T COG4099 307 ------------------------------VYLVR------TLKK---APIWVFHSSDDKVIPVSNSRVLYERLKALDR- 346 (387)
T ss_pred ------------------------------hhhhh------hhcc---CceEEEEecCCCccccCcceeehHHHHhhcc-
Confidence 00111 1222 299999999998887 67778899998876
Q ss_pred cceEEEEeC
Q 042745 290 GRAEIVETK 298 (331)
Q Consensus 290 ~~~~~~~~~ 298 (331)
++++..+.
T Consensus 347 -kv~Ytaf~ 354 (387)
T COG4099 347 -KVNYTAFL 354 (387)
T ss_pred -ccchhhhh
Confidence 66666554
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.55 E-value=2.6e-13 Score=116.54 Aligned_cols=232 Identities=16% Similarity=0.096 Sum_probs=133.3
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-------CC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-------VP 132 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-------~~ 132 (331)
++.+.+++..++.. ...|.||.+|| ..|+...+....+++.+ .+.|+.||++++|++.... ..
T Consensus 59 g~~~~ldw~~~p~~------~~~P~vVl~HG---L~G~s~s~y~r~L~~~~-~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 59 GGFIDLDWSEDPRA------AKKPLVVLFHG---LEGSSNSPYARGLMRAL-SRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred CCEEEEeeccCccc------cCCceEEEEec---cCCCCcCHHHHHHHHHH-HhcCCeEEEEecccccCCcccCcceecc
Confidence 78888888886444 56799999999 66666553223344444 4569999999999885421 23
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchH-HHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 133 CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGA-NIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 133 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG-~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
...+|+...++|++.. ..+.++..+|.|+|| ++|..++.+..+. .+.+.+.+|-.++....
T Consensus 129 G~t~D~~~~l~~l~~~-------------~~~r~~~avG~SLGgnmLa~ylgeeg~d~-----~~~aa~~vs~P~Dl~~~ 190 (345)
T COG0429 129 GETEDIRFFLDWLKAR-------------FPPRPLYAVGFSLGGNMLANYLGEEGDDL-----PLDAAVAVSAPFDLEAC 190 (345)
T ss_pred cchhHHHHHHHHHHHh-------------CCCCceEEEEecccHHHHHHHHHhhccCc-----ccceeeeeeCHHHHHHH
Confidence 3459999999999886 456889999999999 5555555544432 45555555433322110
Q ss_pred -------CCCCccCchhhhHH----HHHHHhhccCC-------------CCCCCCC----------------CCCCCCCC
Q 042745 212 -------VGNETTDAKHRAFF----DGIWRMGYRSE-------------TNGCDDP----------------WINPCVEG 251 (331)
Q Consensus 212 -------~~~~~~~~~~~~~~----~~~~~~~~~~~-------------~~~~~~~----------------~~~~~~~~ 251 (331)
.............+ ......+-+.. ...-++. .+|++.
T Consensus 191 ~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~-- 268 (345)
T COG0429 191 AYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLP-- 268 (345)
T ss_pred HHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccc--
Confidence 00000000000000 00000000000 0000011 122222
Q ss_pred CCcccCCCCeEEEEEeCCCccchh-HHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHH-HHHHHHHHHHhhcc
Q 042745 252 SSLASMGCARVLVFVAEKDKLAAR-GWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENA-RVMLQQIASFFNLQ 328 (331)
Q Consensus 252 ~~l~~~~~~Pvli~~G~~D~~v~~-~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~-~~~~~~i~~fl~~~ 328 (331)
.+.+|.. |+||+|+.+|++++. .....+.. ... ++.+.+.+.+||.=.+... ..+. .-+.+++.+||+..
T Consensus 269 -~L~~Ir~-PtLii~A~DDP~~~~~~iP~~~~~--~np--~v~l~~t~~GGHvGfl~~~-~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 269 -LLPKIRK-PTLIINAKDDPFMPPEVIPKLQEM--LNP--NVLLQLTEHGGHVGFLGGK-LLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred -ccccccc-ceEEEecCCCCCCChhhCCcchhc--CCC--ceEEEeecCCceEEeccCc-cccchhhHHHHHHHHHHHH
Confidence 5666776 999999999999863 33322222 333 7899999999997554432 2222 35667788898754
No 84
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.54 E-value=1.5e-13 Score=114.57 Aligned_cols=120 Identities=28% Similarity=0.316 Sum_probs=83.6
Q ss_pred EEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC--CCC----------CC
Q 042745 64 SARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA--PEN----------PV 131 (331)
Q Consensus 64 ~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~--~~~----------~~ 131 (331)
..++|.|+.. ..++.|+||++||.+.....- ....-+..++.+.||+|+.|+-... ... ..
T Consensus 2 ~Y~lYvP~~~----~~~~~PLVv~LHG~~~~a~~~---~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g 74 (220)
T PF10503_consen 2 SYRLYVPPGA----PRGPVPLVVVLHGCGQSAEDF---AAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRG 74 (220)
T ss_pred cEEEecCCCC----CCCCCCEEEEeCCCCCCHHHH---HhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccC
Confidence 4679999976 235789999999965432110 0112235788889999999984321 111 11
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
......+...++++..+.. +|++||++.|+|+||+++..++..+++ .|.++..+++...
T Consensus 75 ~~d~~~i~~lv~~v~~~~~-----------iD~~RVyv~G~S~Gg~ma~~la~~~pd------~faa~a~~sG~~~ 133 (220)
T PF10503_consen 75 GGDVAFIAALVDYVAARYN-----------IDPSRVYVTGLSNGGMMANVLACAYPD------LFAAVAVVSGVPY 133 (220)
T ss_pred ccchhhHHHHHHhHhhhcc-----------cCCCceeeEEECHHHHHHHHHHHhCCc------cceEEEeeccccc
Confidence 1233445566777766542 999999999999999999999999987 7888888887653
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.53 E-value=2e-14 Score=128.68 Aligned_cols=234 Identities=14% Similarity=0.096 Sum_probs=124.7
Q ss_pred ccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCC
Q 042745 46 DSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRR 125 (331)
Q Consensus 46 ~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~ 125 (331)
..+.++++-+ +..+++.++.|... ++.|+||++-| ..+.... +...+...+...|++++.+|.++
T Consensus 164 ~i~~v~iP~e----g~~I~g~LhlP~~~------~p~P~VIv~gG---lDs~qeD--~~~l~~~~l~~rGiA~LtvDmPG 228 (411)
T PF06500_consen 164 PIEEVEIPFE----GKTIPGYLHLPSGE------KPYPTVIVCGG---LDSLQED--LYRLFRDYLAPRGIAMLTVDMPG 228 (411)
T ss_dssp EEEEEEEEET----TCEEEEEEEESSSS------S-EEEEEEE-----TTS-GGG--GHHHHHCCCHHCT-EEEEE--TT
T ss_pred CcEEEEEeeC----CcEEEEEEEcCCCC------CCCCEEEEeCC---cchhHHH--HHHHHHHHHHhCCCEEEEEccCC
Confidence 3566666653 68899999999854 78898888766 2222222 34444444445699999999998
Q ss_pred CCCCC-C---CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEE
Q 042745 126 APENP-V---PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVL 201 (331)
Q Consensus 126 ~~~~~-~---~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~ 201 (331)
.+... + ++.-.-..++++||.+... +|.+||+++|.|+||++|..+|..... +++++|.
T Consensus 229 ~G~s~~~~l~~D~~~l~~aVLd~L~~~p~-----------VD~~RV~~~G~SfGGy~AvRlA~le~~------RlkavV~ 291 (411)
T PF06500_consen 229 QGESPKWPLTQDSSRLHQAVLDYLASRPW-----------VDHTRVGAWGFSFGGYYAVRLAALEDP------RLKAVVA 291 (411)
T ss_dssp SGGGTTT-S-S-CCHHHHHHHHHHHHSTT-----------EEEEEEEEEEETHHHHHHHHHHHHTTT------T-SEEEE
T ss_pred CcccccCCCCcCHHHHHHHHHHHHhcCCc-----------cChhheEEEEeccchHHHHHHHHhccc------ceeeEee
Confidence 76532 1 1111223578899988753 999999999999999999999864432 7999999
Q ss_pred ecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCC------CCCCCCCCCCCCCc--ccCCCCeEEEEEeCCCccc
Q 042745 202 VHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGC------DDPWINPCVEGSSL--ASMGCARVLVFVAEKDKLA 273 (331)
Q Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l--~~~~~~Pvli~~G~~D~~v 273 (331)
..|....--... .... .........+...++.. ... .....|-.... -+ .+.++ |+|.+.|++|++.
T Consensus 292 ~Ga~vh~~ft~~-~~~~-~~P~my~d~LA~rlG~~-~~~~~~l~~el~~~SLk~qG-lL~~rr~~~-plL~i~~~~D~v~ 366 (411)
T PF06500_consen 292 LGAPVHHFFTDP-EWQQ-RVPDMYLDVLASRLGMA-AVSDESLRGELNKFSLKTQG-LLSGRRCPT-PLLAINGEDDPVS 366 (411)
T ss_dssp ES---SCGGH-H-HHHT-TS-HHHHHHHHHHCT-S-CE-HHHHHHHGGGGSTTTTT-TTTSS-BSS--EEEEEETT-SSS
T ss_pred eCchHhhhhccH-HHHh-cCCHHHHHHHHHHhCCc-cCCHHHHHHHHHhcCcchhc-cccCCCCCc-ceEEeecCCCCCC
Confidence 988653211000 0000 01111112222211111 000 00011111110 22 33444 9999999999999
Q ss_pred hhHHHHHHHHHhcCCCcceEEEEeCC-CceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 274 ARGWLYYEKLKESGWKGRAEIVETKG-ESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 274 ~~~~~~~~~l~~~g~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
|..... .+...+. +-+...++. .-|. ...+.+..+..||++++
T Consensus 367 P~eD~~--lia~~s~--~gk~~~~~~~~~~~---------gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 367 PIEDSR--LIAESST--DGKALRIPSKPLHM---------GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -HHHHH--HHHHTBT--T-EEEEE-SSSHHH---------HHHHHHHHHHHHHHHHH
T ss_pred CHHHHH--HHHhcCC--CCceeecCCCcccc---------chHHHHHHHHHHHHHhc
Confidence 855432 3333332 345555553 3362 33688999999998753
No 86
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.53 E-value=1.7e-12 Score=113.59 Aligned_cols=102 Identities=18% Similarity=0.203 Sum_probs=69.6
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC----CChHHHH-HHHHHHHHHhccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV----PCAHDDS-WAAIKWVASHVNGSGP 154 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~----~~~~~d~-~~~~~~l~~~~~~~~~ 154 (331)
+++|.|||+||.+. +... |..+...|. +.||.|+.+|+++++.... ...+++. ....+++...
T Consensus 16 ~~~p~vvliHG~~~---~~~~--w~~~~~~L~-~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l------ 83 (273)
T PLN02211 16 RQPPHFVLIHGISG---GSWC--WYKIRCLME-NSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL------ 83 (273)
T ss_pred CCCCeEEEECCCCC---CcCc--HHHHHHHHH-hCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc------
Confidence 45789999999543 2222 556666654 4599999999998875321 1234443 3333444332
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
...+++.|+||||||.++..++.+.++ .++++|++++..
T Consensus 84 -------~~~~~v~lvGhS~GG~v~~~~a~~~p~------~v~~lv~~~~~~ 122 (273)
T PLN02211 84 -------PENEKVILVGHSAGGLSVTQAIHRFPK------KICLAVYVAATM 122 (273)
T ss_pred -------CCCCCEEEEEECchHHHHHHHHHhChh------heeEEEEecccc
Confidence 123789999999999999999987754 799999987653
No 87
>PLN02872 triacylglycerol lipase
Probab=99.53 E-value=2.4e-13 Score=123.97 Aligned_cols=140 Identities=13% Similarity=0.072 Sum_probs=81.8
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
.+...++..+.+ .||..+.++-+.+.... ....++|+|+++||.+..............+...+++.||.|+.+|
T Consensus 40 ~gy~~e~h~v~T---~DGy~L~l~ri~~~~~~--~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n 114 (395)
T PLN02872 40 AGYSCTEHTIQT---KDGYLLALQRVSSRNPR--LGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGN 114 (395)
T ss_pred cCCCceEEEEEC---CCCcEEEEEEcCCCCCC--CCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccc
Confidence 456667777776 55666666655333220 1124578999999954322111000001122333345699999999
Q ss_pred CCCCCCC----------------CCCCh-HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHh
Q 042745 123 YRRAPEN----------------PVPCA-HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 123 yr~~~~~----------------~~~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~ 185 (331)
.|++... .+... ..|+.++++++.+. ..+++.++|||+||.+++.++.
T Consensus 115 ~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~--------------~~~~v~~VGhS~Gg~~~~~~~~- 179 (395)
T PLN02872 115 VRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI--------------TNSKIFIVGHSQGTIMSLAALT- 179 (395)
T ss_pred ccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc--------------cCCceEEEEECHHHHHHHHHhh-
Confidence 9985311 11112 36899999998763 2378999999999999986554
Q ss_pred hcccccCCCceeEEEEeccc
Q 042745 186 NGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 186 ~~~~~~~~~~i~~~i~~~p~ 205 (331)
.++.. ..++.+++++|.
T Consensus 180 ~p~~~---~~v~~~~~l~P~ 196 (395)
T PLN02872 180 QPNVV---EMVEAAALLCPI 196 (395)
T ss_pred ChHHH---HHHHHHHHhcch
Confidence 33211 145555555554
No 88
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.52 E-value=3.8e-13 Score=108.88 Aligned_cols=162 Identities=23% Similarity=0.285 Sum_probs=120.0
Q ss_pred HHHHHHHHhcCCeEEEEecCCCC----CC------------CCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeE
Q 042745 104 HSYLNALVSACNVVAVSVDYRRA----PE------------NPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRV 167 (331)
Q Consensus 104 ~~~~~~la~~~G~~vv~~dyr~~----~~------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i 167 (331)
...+..++ ..||.|+.||+-.. ++ +..+...+|+...++||+.+ .+..+|
T Consensus 57 r~~Adk~A-~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~-------------g~~kkI 122 (242)
T KOG3043|consen 57 REGADKVA-LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH-------------GDSKKI 122 (242)
T ss_pred HHHHHHHh-cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc-------------CCccee
Confidence 34444554 55999999996533 21 34455678999999999965 677999
Q ss_pred EEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCC
Q 042745 168 FFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINP 247 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (331)
+++|.++||.++..+....+ .+.++++.+|-+....
T Consensus 123 Gv~GfCwGak~vv~~~~~~~-------~f~a~v~~hps~~d~~------------------------------------- 158 (242)
T KOG3043|consen 123 GVVGFCWGAKVVVTLSAKDP-------EFDAGVSFHPSFVDSA------------------------------------- 158 (242)
T ss_pred eEEEEeecceEEEEeeccch-------hheeeeEecCCcCChh-------------------------------------
Confidence 99999999999887776654 5888888877653111
Q ss_pred CCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeee--cCCCc----HHHHHHHH
Q 042745 248 CVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHL--FNPNS----ENARVMLQ 319 (331)
Q Consensus 248 ~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~--~~~~~----~~~~~~~~ 319 (331)
+..++++ |++++.|+.|.++| ...++.++|++...- .+++.+|+|.+|+|.. .+... ...++.++
T Consensus 159 -----D~~~vk~-Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~-~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~ 231 (242)
T KOG3043|consen 159 -----DIANVKA-PILFLFAELDEDVPPKDVKAWEEKLKENPAV-GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQ 231 (242)
T ss_pred -----HHhcCCC-CEEEEeecccccCCHHHHHHHHHHHhcCccc-ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHH
Confidence 3344455 99999999999976 556777888877532 3579999999999985 33333 35788899
Q ss_pred HHHHHhhccCC
Q 042745 320 QIASFFNLQDK 330 (331)
Q Consensus 320 ~i~~fl~~~~~ 330 (331)
++++||+.+++
T Consensus 232 ~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 232 RFISWFKHYLA 242 (242)
T ss_pred HHHHHHHHhhC
Confidence 99999998763
No 89
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.52 E-value=1.5e-14 Score=127.19 Aligned_cols=216 Identities=18% Similarity=0.130 Sum_probs=109.0
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccc----cCCC---------CchhHHHHHH
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCI----ETPF---------SPFYHSYLNA 109 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~----g~~~---------~~~~~~~~~~ 109 (331)
.+...+.+.+.+ ..+..+++.++.|++. .++.|+||++||.|... |... ......+...
T Consensus 84 dGY~~EKv~f~~---~p~~~vpaylLvPd~~-----~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~ 155 (390)
T PF12715_consen 84 DGYTREKVEFNT---TPGSRVPAYLLVPDGA-----KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQ 155 (390)
T ss_dssp TTEEEEEEEE-----STTB-EEEEEEEETT-------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHH
T ss_pred CCeEEEEEEEEc---cCCeeEEEEEEecCCC-----CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHH
Confidence 445566677765 4577899999999985 47899999999965322 1100 0001234556
Q ss_pred HHhcCCeEEEEecCCCCCCCC----------CCC-----------------hHHHHHHHHHHHHHhccCCCCCccccccC
Q 042745 110 LVSACNVVAVSVDYRRAPENP----------VPC-----------------AHDDSWAAIKWVASHVNGSGPEDWLNRYA 162 (331)
Q Consensus 110 la~~~G~~vv~~dyr~~~~~~----------~~~-----------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 162 (331)
++ +.||+|+++|-.+.++.. ... ..-|...+++||.+... +
T Consensus 156 LA-k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe-----------V 223 (390)
T PF12715_consen 156 LA-KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE-----------V 223 (390)
T ss_dssp HH-TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT-----------E
T ss_pred HH-hCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc-----------c
Confidence 65 569999999987654311 000 11366679999998864 9
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC----CCCCccCchhhhHHHHHHHhhccCCCC
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP----VGNETTDAKHRAFFDGIWRMGYRSETN 238 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (331)
|++||+++|+||||..++.+++-.. +|++.+..+ ++..... ......+ .......-...+.|....
T Consensus 224 D~~RIG~~GfSmGg~~a~~LaALDd-------RIka~v~~~-~l~~~~~~~~~mt~~~~~--~~~~~~~~~~~~iPgl~r 293 (390)
T PF12715_consen 224 DPDRIGCMGFSMGGYRAWWLAALDD-------RIKATVANG-YLCTTQERALLMTMPNNN--GLRGFPNCICNYIPGLWR 293 (390)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHH-T-------T--EEEEES--B--HHHHHHHB----TT--S----SS-GGG--TTCCC
T ss_pred CccceEEEeecccHHHHHHHHHcch-------hhHhHhhhh-hhhccchhhHhhcccccc--ccCcCcchhhhhCccHHh
Confidence 9999999999999999999998765 688777643 2211000 0000000 000000000111121100
Q ss_pred CCCCCCCCCCCCCCCcccCCCC-eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCC
Q 042745 239 GCDDPWINPCVEGSSLASMGCA-RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGE 300 (331)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~~~~~-Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~ 300 (331)
..+.+ ++..+-+| |+|++.|+.|.+++..+ ++....|.+++++++.||+.
T Consensus 294 ~~D~P---------dIasliAPRPll~~nG~~Dklf~iV~---~AY~~~~~p~n~~~~~~p~~ 344 (390)
T PF12715_consen 294 YFDFP---------DIASLIAPRPLLFENGGKDKLFPIVR---RAYAIMGAPDNFQIHHYPKF 344 (390)
T ss_dssp C--HH---------HHHHTTTTS-EEESS-B-HHHHHHHH---HHHHHTT-GGGEEE---GGG
T ss_pred hCccH---------HHHHHhCCCcchhhcCCcccccHHHH---HHHHhcCCCcceEEeecccc
Confidence 00111 33344444 99999999998887543 34444555558999999863
No 90
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.51 E-value=1.1e-12 Score=116.80 Aligned_cols=99 Identities=18% Similarity=0.151 Sum_probs=68.4
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-----ChHHHHHHHHHHHHHhccCCCCCc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-----CAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
.+.||++||++.. ... ......+ ...+|.|+.+|+|+++....+ ...+|....+..+.+.
T Consensus 27 ~~~lvllHG~~~~---~~~---~~~~~~~-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~-------- 91 (306)
T TIGR01249 27 GKPVVFLHGGPGS---GTD---PGCRRFF-DPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK-------- 91 (306)
T ss_pred CCEEEEECCCCCC---CCC---HHHHhcc-CccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH--------
Confidence 4568999996432 111 1222223 335899999999998754432 2345666666666554
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
.+.+++.++||||||.+++.++.++++ .++++|+.+++.
T Consensus 92 -----l~~~~~~lvG~S~GG~ia~~~a~~~p~------~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 -----LGIKNWLVFGGSWGSTLALAYAQTHPE------VVTGLVLRGIFL 130 (306)
T ss_pred -----cCCCCEEEEEECHHHHHHHHHHHHChH------hhhhheeecccc
Confidence 445789999999999999999998865 688888887654
No 91
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.50 E-value=1.3e-12 Score=138.28 Aligned_cols=216 Identities=19% Similarity=0.176 Sum_probs=125.0
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-----------ChHHHHHHHHHHHHHhc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-----------CAHDDSWAAIKWVASHV 149 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-----------~~~~d~~~~~~~l~~~~ 149 (331)
..|+|||+||.+. +... |..++..+. + +|.|+.+|+|+++....+ ..+++..+.+.-+.+.
T Consensus 1370 ~~~~vVllHG~~~---s~~~--w~~~~~~L~-~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~- 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLG---TGED--WIPIMKAIS-G-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH- 1441 (1655)
T ss_pred CCCeEEEECCCCC---CHHH--HHHHHHHHh-C-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH-
Confidence 4689999999553 3222 556666664 3 699999999998764322 2344444444433333
Q ss_pred cCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCc---cCc-h---h-
Q 042745 150 NGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNET---TDA-K---H- 221 (331)
Q Consensus 150 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~---~~~-~---~- 221 (331)
.+.+++.|+||||||.+|+.++.++++ .++++|++++............ ... . .
T Consensus 1442 ------------l~~~~v~LvGhSmGG~iAl~~A~~~P~------~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~ 1503 (1655)
T PLN02980 1442 ------------ITPGKVTLVGYSMGARIALYMALRFSD------KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLI 1503 (1655)
T ss_pred ------------hCCCCEEEEEECHHHHHHHHHHHhChH------hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHH
Confidence 345789999999999999999998875 7999999876432111000000 000 0 0
Q ss_pred hhHHHHHHHhhccCC-----CC------------CCCCC--------CCCCCCCC---CCcccCCCCeEEEEEeCCCccc
Q 042745 222 RAFFDGIWRMGYRSE-----TN------------GCDDP--------WINPCVEG---SSLASMGCARVLVFVAEKDKLA 273 (331)
Q Consensus 222 ~~~~~~~~~~~~~~~-----~~------------~~~~~--------~~~~~~~~---~~l~~~~~~Pvli~~G~~D~~v 273 (331)
......+...++... .. ..... ........ ..+.++++ |+|+++|++|..+
T Consensus 1504 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~-PtLlI~Ge~D~~~ 1582 (1655)
T PLN02980 1504 DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDT-PLLLVVGEKDVKF 1582 (1655)
T ss_pred hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCC-CEEEEEECCCCcc
Confidence 000000000000000 00 00000 00000000 14667777 9999999999877
Q ss_pred h-hHHHHHHHHHhcCC------CcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 274 A-RGWLYYEKLKESGW------KGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 274 ~-~~~~~~~~l~~~g~------~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+ .+..+.+.+.+... +..++++++++++|... .++.+++.+.|.+||++.
T Consensus 1583 ~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~-----lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1583 KQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVH-----LENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred HHHHHHHHHHccccccccccccccceEEEEECCCCCchH-----HHCHHHHHHHHHHHHHhc
Confidence 5 34556666554210 00368999999999655 355688999999999874
No 92
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.49 E-value=1.2e-12 Score=105.10 Aligned_cols=193 Identities=12% Similarity=0.170 Sum_probs=119.9
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-------CCCChHHHHHHHHHHHHHhccCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-------PVPCAHDDSWAAIKWVASHVNGS 152 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-------~~~~~~~d~~~~~~~l~~~~~~~ 152 (331)
+..-++|++|| +..++.. .+...++....+.|+.++.+|+++.++. .+....+|+..+++++...
T Consensus 31 gs~e~vvlcHG---frS~Kn~-~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~---- 102 (269)
T KOG4667|consen 31 GSTEIVVLCHG---FRSHKNA-IIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS---- 102 (269)
T ss_pred CCceEEEEeec---cccccch-HHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC----
Confidence 45679999998 4444443 3444445555677999999999987653 3445679999999998763
Q ss_pred CCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHH-HHHHh
Q 042745 153 GPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFD-GIWRM 231 (331)
Q Consensus 153 ~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 231 (331)
+..=-+|+|||-||.+++.++.++.+ ++-+|.+++-++........-.........+ .+|..
T Consensus 103 ----------nr~v~vi~gHSkGg~Vvl~ya~K~~d-------~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~ 165 (269)
T KOG4667|consen 103 ----------NRVVPVILGHSKGGDVVLLYASKYHD-------IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDV 165 (269)
T ss_pred ----------ceEEEEEEeecCccHHHHHHHHhhcC-------chheEEcccccchhcchhhhhcccHHHHHHhCCceec
Confidence 22234689999999999999999874 7778888877765443321111100000000 11111
Q ss_pred hccCCCC----------CCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCC
Q 042745 232 GYRSETN----------GCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKG 299 (331)
Q Consensus 232 ~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g 299 (331)
--..... ......+++... .+ ...| ++|-+||..|.+|| .+.+|++.+..+ ++++++|
T Consensus 166 ~~rkG~y~~rvt~eSlmdrLntd~h~acl--kI-d~~C-~VLTvhGs~D~IVPve~AkefAk~i~nH------~L~iIEg 235 (269)
T KOG4667|consen 166 GPRKGKYGYRVTEESLMDRLNTDIHEACL--KI-DKQC-RVLTVHGSEDEIVPVEDAKEFAKIIPNH------KLEIIEG 235 (269)
T ss_pred CcccCCcCceecHHHHHHHHhchhhhhhc--Cc-CccC-ceEEEeccCCceeechhHHHHHHhccCC------ceEEecC
Confidence 0000000 000001111110 22 2346 99999999999987 778888877663 6899999
Q ss_pred Cceeeeec
Q 042745 300 ESHVFHLF 307 (331)
Q Consensus 300 ~~H~~~~~ 307 (331)
++|+|...
T Consensus 236 ADHnyt~~ 243 (269)
T KOG4667|consen 236 ADHNYTGH 243 (269)
T ss_pred CCcCccch
Confidence 99999854
No 93
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.48 E-value=1.2e-12 Score=109.25 Aligned_cols=121 Identities=25% Similarity=0.365 Sum_probs=85.6
Q ss_pred cceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC
Q 042745 47 SKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA 126 (331)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~ 126 (331)
.++|+++. ....+++|+-... ....|++++.||||+..-+ |..++.++..+.-+.|+++|.|++
T Consensus 50 kedv~i~~------~~~t~n~Y~t~~~-----~t~gpil~l~HG~G~S~LS-----fA~~a~el~s~~~~r~~a~DlRgH 113 (343)
T KOG2564|consen 50 KEDVSIDG------SDLTFNVYLTLPS-----ATEGPILLLLHGGGSSALS-----FAIFASELKSKIRCRCLALDLRGH 113 (343)
T ss_pred ccccccCC------CcceEEEEEecCC-----CCCccEEEEeecCcccchh-----HHHHHHHHHhhcceeEEEeecccc
Confidence 46777774 2334555543332 2468999999998875333 678888888888899999999999
Q ss_pred CCCCCC--------ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeE
Q 042745 127 PENPVP--------CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAG 198 (331)
Q Consensus 127 ~~~~~~--------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~ 198 (331)
++.... ...+|+.+.++.+... .+.+|+|+||||||.+|.+.|....-. .+.|
T Consensus 114 GeTk~~~e~dlS~eT~~KD~~~~i~~~fge--------------~~~~iilVGHSmGGaIav~~a~~k~lp-----sl~G 174 (343)
T KOG2564|consen 114 GETKVENEDDLSLETMSKDFGAVIKELFGE--------------LPPQIILVGHSMGGAIAVHTAASKTLP-----SLAG 174 (343)
T ss_pred CccccCChhhcCHHHHHHHHHHHHHHHhcc--------------CCCceEEEeccccchhhhhhhhhhhch-----hhhc
Confidence 875443 3557888777777653 346799999999999998877654321 4555
Q ss_pred EEEe
Q 042745 199 IVLV 202 (331)
Q Consensus 199 ~i~~ 202 (331)
++.+
T Consensus 175 l~vi 178 (343)
T KOG2564|consen 175 LVVI 178 (343)
T ss_pred eEEE
Confidence 5543
No 94
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.48 E-value=4.6e-12 Score=116.23 Aligned_cols=218 Identities=16% Similarity=0.177 Sum_probs=135.4
Q ss_pred cceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcC---CeEEEEecC
Q 042745 47 SKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSAC---NVVAVSVDY 123 (331)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~---G~~vv~~dy 123 (331)
.+.+++.+. .-+....+.+|.|++. . .++.|+|+++||..|..... ....+..+.++. .+++|.+|.
T Consensus 180 ~~~~~~~S~--~Lg~~r~v~VY~P~~y---~-~~~~PvlyllDG~~w~~~~~----~~~~ld~li~~g~i~P~ivV~id~ 249 (411)
T PRK10439 180 AKEIIWKSE--RLGNSRRVWIYTTGDA---A-PEERPLAILLDGQFWAESMP----VWPALDSLTHRGQLPPAVYLLIDA 249 (411)
T ss_pred eEEEEEEcc--ccCCceEEEEEECCCC---C-CCCCCEEEEEECHHhhhcCC----HHHHHHHHHHcCCCCceEEEEECC
Confidence 455666653 3356789999999886 2 46899999999988864322 234455555442 256777875
Q ss_pred CCC----CCCCCCC-hHHHH-HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCcee
Q 042745 124 RRA----PENPVPC-AHDDS-WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVA 197 (331)
Q Consensus 124 r~~----~~~~~~~-~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~ 197 (331)
... .+..... ..+.+ ...+.++.++.. .. .|+++.+|+|+||||..|+.++.++++ .+.
T Consensus 250 ~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~-~~--------~d~~~~~IaG~S~GGl~AL~~al~~Pd------~Fg 314 (411)
T PRK10439 250 IDTTHRSQELPCNADFWLAVQQELLPQVRAIAP-FS--------DDADRTVVAGQSFGGLAALYAGLHWPE------RFG 314 (411)
T ss_pred CCcccccccCCchHHHHHHHHHHHHHHHHHhCC-CC--------CCccceEEEEEChHHHHHHHHHHhCcc------ccc
Confidence 211 1111111 11122 234455555421 11 578899999999999999999999987 799
Q ss_pred EEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCC-ccchhH
Q 042745 198 GIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKD-KLAARG 276 (331)
Q Consensus 198 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D-~~v~~~ 276 (331)
+++++||.+....... .. . .++...+.. . .....+. .++|-+|+.| .++..+
T Consensus 315 ~v~s~Sgs~ww~~~~~---~~---~---~~l~~~l~~-~----------------~~~~~~l-r~~i~~G~~E~~~~~~~ 367 (411)
T PRK10439 315 CVLSQSGSFWWPHRGG---QQ---E---GVLLEQLKA-G----------------EVSARGL-RIVLEAGRREPMIMRAN 367 (411)
T ss_pred EEEEeccceecCCccC---Cc---h---hHHHHHHHh-c----------------ccCCCCc-eEEEeCCCCCchHHHHH
Confidence 9999999774322110 00 0 011111100 0 0000111 6889999988 555788
Q ss_pred HHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 277 WLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 277 ~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+.+++.|+++|. ++++.+++| +|.+..+ +..+.+.+.||-
T Consensus 368 ~~l~~~L~~~G~--~~~~~~~~G-GHd~~~W-------r~~L~~~L~~l~ 407 (411)
T PRK10439 368 QALYAQLHPAGH--SVFWRQVDG-GHDALCW-------RGGLIQGLIDLW 407 (411)
T ss_pred HHHHHHHHHCCC--cEEEEECCC-CcCHHHH-------HHHHHHHHHHHh
Confidence 999999999998 999999998 6976644 344444455553
No 95
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.47 E-value=8.1e-14 Score=110.66 Aligned_cols=206 Identities=16% Similarity=0.168 Sum_probs=135.5
Q ss_pred cEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-----CCCCC--hHHHHHHHHHHHHHhccCCCCC
Q 042745 83 PLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-----NPVPC--AHDDSWAAIKWVASHVNGSGPE 155 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-----~~~~~--~~~d~~~~~~~l~~~~~~~~~~ 155 (331)
-.|+++-| ..|+... .|...+..+.....+++++.|-++.+. ..++. ..+|+..+++-+..
T Consensus 43 ~~iLlipG---alGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~a-------- 110 (277)
T KOG2984|consen 43 NYILLIPG---ALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEA-------- 110 (277)
T ss_pred ceeEeccc---ccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHH--------
Confidence 35777777 3444432 155666677766679999999887643 34443 45899999998887
Q ss_pred ccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCC-------------CCCc----cC
Q 042745 156 DWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPV-------------GNET----TD 218 (331)
Q Consensus 156 ~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~-------------~~~~----~~ 218 (331)
.+.+++.|+|+|-||..|+.+|++.++ .|..+|.+.......... .... .+
T Consensus 111 ------Lk~~~fsvlGWSdGgiTalivAak~~e------~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~ 178 (277)
T KOG2984|consen 111 ------LKLEPFSVLGWSDGGITALIVAAKGKE------KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYED 178 (277)
T ss_pred ------hCCCCeeEeeecCCCeEEEEeeccChh------hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHH
Confidence 667899999999999999999999876 577777665433211110 0001 11
Q ss_pred chhhhHHHHHHHhhccCCC---CCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch-hHHHHHHHHHhcCCCcceEE
Q 042745 219 AKHRAFFDGIWRMGYRSET---NGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA-RGWLYYEKLKESGWKGRAEI 294 (331)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~-~~~~~~~~l~~~g~~~~~~~ 294 (331)
-+..+.+...|..+..... ...+-..+.- .+.+++| |+||+||+.|++++ ....|...+... .++
T Consensus 179 ~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~-----~lp~vkc-Ptli~hG~kDp~~~~~hv~fi~~~~~~-----a~~ 247 (277)
T KOG2984|consen 179 HYGPETFRTQWAAWVDVVDQFHSFCDGRFCRL-----VLPQVKC-PTLIMHGGKDPFCGDPHVCFIPVLKSL-----AKV 247 (277)
T ss_pred hcCHHHHHHHHHHHHHHHHHHhhcCCCchHhh-----hcccccC-CeeEeeCCcCCCCCCCCccchhhhccc-----ceE
Confidence 1234445555544422110 0011111211 5677888 99999999999996 455555555443 578
Q ss_pred EEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 295 VETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 295 ~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
++.+.+.|.|.+. .++++...+.+||+++
T Consensus 248 ~~~peGkHn~hLr-----ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 248 EIHPEGKHNFHLR-----YAKEFNKLVLDFLKST 276 (277)
T ss_pred EEccCCCcceeee-----chHHHHHHHHHHHhcc
Confidence 9999999999854 4689999999999875
No 96
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.47 E-value=2.6e-12 Score=114.48 Aligned_cols=216 Identities=19% Similarity=0.196 Sum_probs=124.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC-CCC----CCChHHHHHHHHHHHHHhccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP-ENP----VPCAHDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~-~~~----~~~~~~d~~~~~~~l~~~~~~~~~ 154 (331)
...|.||++||-|. +... |...+..+....|+.|+++|..+.+ ... .+..+.+....++-+...
T Consensus 56 ~~~~pvlllHGF~~---~~~~--w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~------ 124 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGA---SSFS--WRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE------ 124 (326)
T ss_pred CCCCcEEEeccccC---Cccc--HhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh------
Confidence 57899999998443 2222 5666777776668999999998854 221 223444444444444333
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEE---EecccccCCCCCCCCcc-------------C
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIV---LVHPYFWGSTPVGNETT-------------D 218 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i---~~~p~~~~~~~~~~~~~-------------~ 218 (331)
..-+++.|+|||+||.+|+.+|+.+++ .++.++ ++.|............. .
T Consensus 125 -------~~~~~~~lvghS~Gg~va~~~Aa~~P~------~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (326)
T KOG1454|consen 125 -------VFVEPVSLVGHSLGGIVALKAAAYYPE------TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLI 191 (326)
T ss_pred -------hcCcceEEEEeCcHHHHHHHHHHhCcc------cccceeeecccccccccCCcchhHHHHhhhhhccHhhhcC
Confidence 223569999999999999999999976 789888 54443332221100000 0
Q ss_pred chhhhHHH-----HHHHhhcc---C-C-----------C----CCCCCCCCC----CC----CCCCCcccCC-CCeEEEE
Q 042745 219 AKHRAFFD-----GIWRMGYR---S-E-----------T----NGCDDPWIN----PC----VEGSSLASMG-CARVLVF 265 (331)
Q Consensus 219 ~~~~~~~~-----~~~~~~~~---~-~-----------~----~~~~~~~~~----~~----~~~~~l~~~~-~~Pvli~ 265 (331)
........ ..+..... . . . ....+.+.+ .. ...+.+.++. + |++|+
T Consensus 192 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-pvlii 270 (326)
T KOG1454|consen 192 PLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKC-PVLII 270 (326)
T ss_pred ccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCC-ceEEE
Confidence 00000000 00000000 0 0 0 000000000 00 0000334444 6 99999
Q ss_pred EeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 266 VAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 266 ~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
+|+.|.+++.. .+..+++.-. +++++++++++|.-+ .+.++++.+.|..|++.+.
T Consensus 271 ~G~~D~~~p~~--~~~~~~~~~p--n~~~~~I~~~gH~~h-----~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 271 WGDKDQIVPLE--LAEELKKKLP--NAELVEIPGAGHLPH-----LERPEEVAALLRSFIARLR 325 (326)
T ss_pred EcCcCCccCHH--HHHHHHhhCC--CceEEEeCCCCcccc-----cCCHHHHHHHHHHHHHHhc
Confidence 99999999732 3344444333 789999999999755 4566899999999998753
No 97
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.45 E-value=4.6e-13 Score=107.05 Aligned_cols=221 Identities=14% Similarity=0.105 Sum_probs=132.5
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC--CC---C--C-CCC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR--RA---P--E-NPV 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr--~~---~--~-~~~ 131 (331)
+-.+...+|.|++. +++++.|++.|+-| ..++..+........+.|.+.|++||.||-. +. + + .+|
T Consensus 25 ~c~Mtf~vylPp~a---~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDF 98 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDA---PRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDF 98 (283)
T ss_pred ccceEEEEecCCCc---ccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccc
Confidence 34588899999888 45677899999998 6677666444566677888899999999953 21 0 0 000
Q ss_pred -----------CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEE
Q 042745 132 -----------PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIV 200 (331)
Q Consensus 132 -----------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i 200 (331)
......-...++|+.+++.+.-- --+..+|+.+++|+||||||+-|+..+++.+. +.+.+-
T Consensus 99 G~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~--~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~------kykSvS 170 (283)
T KOG3101|consen 99 GQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLN--SANVPLDPLKVGIFGHSMGGHGALTIYLKNPS------KYKSVS 170 (283)
T ss_pred cCCceeEEecccchHhhhhhHHHHHHHHHHHHhc--cccccccchhcceeccccCCCceEEEEEcCcc------ccccee
Confidence 01111222344454444321100 00113889999999999999999998888765 677787
Q ss_pred EecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhH---H
Q 042745 201 LVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARG---W 277 (331)
Q Consensus 201 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~---~ 277 (331)
.++|..++..-.+...............|..+-... +.. +....+. -+||-.|..|.+..+. +
T Consensus 171 AFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~-----------lik--~y~~~~~-~ilIdqG~~D~Fl~~qLlPe 236 (283)
T KOG3101|consen 171 AFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATH-----------LIK--NYRGVGD-DILIDQGAADNFLAEQLLPE 236 (283)
T ss_pred ccccccCcccCcchHHHhhcccCCChHHHhhcchHH-----------HHH--hcCCCCc-cEEEecCccchhhhhhcChH
Confidence 888888765544333222111111222333221110 110 3333444 7999999999877521 2
Q ss_pred HHHHHHHhcCCCcceEEEEeCCCceeeeecCC
Q 042745 278 LYYEKLKESGWKGRAEIVETKGESHVFHLFNP 309 (331)
Q Consensus 278 ~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~ 309 (331)
.+.++.+... ..++.+..-+|.+|.+.+...
T Consensus 237 ~l~~a~~~~~-~~~v~~r~~~gyDHSYyfIaT 267 (283)
T KOG3101|consen 237 NLLEACKATW-QAPVVFRLQEGYDHSYYFIAT 267 (283)
T ss_pred HHHHHhhccc-cccEEEEeecCCCcceeeehh
Confidence 3444444322 116788888999999876543
No 98
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.45 E-value=1.1e-11 Score=121.94 Aligned_cols=204 Identities=12% Similarity=0.098 Sum_probs=123.2
Q ss_pred HHHHHhcCCeEEEEecCCCCCCC-----C-CCChHHHHHHHHHHHHHhccCC--------CCCccccccCCCCeEEEeeC
Q 042745 107 LNALVSACNVVAVSVDYRRAPEN-----P-VPCAHDDSWAAIKWVASHVNGS--------GPEDWLNRYADFQRVFFAGD 172 (331)
Q Consensus 107 ~~~la~~~G~~vv~~dyr~~~~~-----~-~~~~~~d~~~~~~~l~~~~~~~--------~~~~~~~~~~d~~~i~l~G~ 172 (331)
...+ ...||+||.+|.|+.... . .+...+|+.++++||..+...+ -.++| .+ .+|+++|.
T Consensus 272 ~~~~-~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~W----sn-GkVGm~G~ 345 (767)
T PRK05371 272 NDYF-LPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADW----SN-GKVAMTGK 345 (767)
T ss_pred HHHH-HhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCC----CC-CeeEEEEE
Confidence 3444 456999999999987542 2 2556789999999999653210 01445 44 69999999
Q ss_pred CchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCC---------C---ccCch----------------hhhH
Q 042745 173 SAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGN---------E---TTDAK----------------HRAF 224 (331)
Q Consensus 173 S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~---------~---~~~~~----------------~~~~ 224 (331)
|+||.+++.+|...+. .++++|..+++.+..+.... . ..+.. ..+.
T Consensus 346 SY~G~~~~~aAa~~pp------~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~ 419 (767)
T PRK05371 346 SYLGTLPNAVATTGVE------GLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEA 419 (767)
T ss_pred cHHHHHHHHHHhhCCC------cceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHH
Confidence 9999999998876543 68899988776543221100 0 00000 0000
Q ss_pred HHHHHHhhccCC--CCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCC
Q 042745 225 FDGIWRMGYRSE--TNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGE 300 (331)
Q Consensus 225 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~ 300 (331)
.......+.... .....++..........+.++++ |+|++||..|..++ ++..++++|++.+. +.++++.++
T Consensus 420 ~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkv-PvLlIhGw~D~~V~~~~s~~ly~aL~~~g~--pkkL~l~~g- 495 (767)
T PRK05371 420 CEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKA-SVLVVHGLNDWNVKPKQVYQWWDALPENGV--PKKLFLHQG- 495 (767)
T ss_pred HHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCC-CEEEEeeCCCCCCChHHHHHHHHHHHhcCC--CeEEEEeCC-
Confidence 000000000000 00000111111110015566777 99999999999986 67889999999877 788877766
Q ss_pred ceeeeecCCCcHHHHHHHHHHHHHhhccCC
Q 042745 301 SHVFHLFNPNSENARVMLQQIASFFNLQDK 330 (331)
Q Consensus 301 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 330 (331)
+|..... ....++.+.+.+||..+++
T Consensus 496 ~H~~~~~----~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 496 GHVYPNN----WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CccCCCc----hhHHHHHHHHHHHHHhccc
Confidence 6854321 2346778889999987763
No 99
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.45 E-value=3.3e-12 Score=115.59 Aligned_cols=65 Identities=12% Similarity=0.053 Sum_probs=47.9
Q ss_pred CcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCC-CceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 253 SLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKG-ESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 253 ~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
.+.++++ |+|+++|++|.+++ .+..+.+.+. . +++++++++ ++|... .++.+++.+.+.+||++.
T Consensus 272 ~l~~I~~-PtLvi~G~~D~~~p~~~~~~~~~~i~---p--~a~l~~i~~~aGH~~~-----lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 272 DPEAIRV-PTVVVAVEGDRLVPLADLVELAEGLG---P--RGSLRVLRSPYGHDAF-----LKETDRIDAILTTALRST 339 (343)
T ss_pred ChhcCCC-CeEEEEeCCCEeeCHHHHHHHHHHcC---C--CCeEEEEeCCccHHHH-----hcCHHHHHHHHHHHHHhc
Confidence 4566777 99999999999886 3444444332 2 468899985 899755 356688999999999864
No 100
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.42 E-value=1.7e-12 Score=113.53 Aligned_cols=218 Identities=17% Similarity=0.176 Sum_probs=124.9
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCch-hHH---HH-HHHHhcCCeEEEEecCCCCCCC----
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPF-YHS---YL-NALVSACNVVAVSVDYRRAPEN---- 129 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~-~~~---~~-~~la~~~G~~vv~~dyr~~~~~---- 129 (331)
||.+|.+++|+| +. ...++.|+||..|+.+.......... ... .. ..+ .+.||+||..|.|+....
T Consensus 1 DGv~L~adv~~P-~~---~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~-~~~GY~vV~~D~RG~g~S~G~~ 75 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA---DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPF-AERGYAVVVQDVRGTGGSEGEF 75 (272)
T ss_dssp TS-EEEEEEEEE------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHH-HHTT-EEEEEE-TTSTTS-S-B
T ss_pred CCCEEEEEEEec-CC---CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHH-HhCCCEEEEECCcccccCCCcc
Confidence 578999999999 32 23589999999998552110000000 000 00 114 456999999999987542
Q ss_pred -C-CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 130 -P-VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 130 -~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
. .+...+|..++++|+.++. | ...||+++|.|++|..++.+|...+ +.+++++..++..+
T Consensus 76 ~~~~~~e~~D~~d~I~W~~~Qp-------w-----s~G~VGm~G~SY~G~~q~~~A~~~~------p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 76 DPMSPNEAQDGYDTIEWIAAQP-------W-----SNGKVGMYGISYGGFTQWAAAARRP------PHLKAIVPQSGWSD 137 (272)
T ss_dssp -TTSHHHHHHHHHHHHHHHHCT-------T-----EEEEEEEEEETHHHHHHHHHHTTT-------TTEEEEEEESE-SB
T ss_pred ccCChhHHHHHHHHHHHHHhCC-------C-----CCCeEEeeccCHHHHHHHHHHhcCC------CCceEEEecccCCc
Confidence 2 4557899999999999853 3 3469999999999999999998553 37999999888776
Q ss_pred CCCCCC--CCccCc-h--------------------hhhHHHH------HHHhhccCCC-----------CCCCCCCCCC
Q 042745 208 GSTPVG--NETTDA-K--------------------HRAFFDG------IWRMGYRSET-----------NGCDDPWINP 247 (331)
Q Consensus 208 ~~~~~~--~~~~~~-~--------------------~~~~~~~------~~~~~~~~~~-----------~~~~~~~~~~ 247 (331)
...... ...... . ....... .......... ....++....
T Consensus 138 ~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 217 (272)
T PF02129_consen 138 LYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQE 217 (272)
T ss_dssp TCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHT
T ss_pred ccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHh
Confidence 654210 000000 0 0000000 0000000000 0001111111
Q ss_pred CCCCCCcccCCCCeEEEEEeCCC-ccchhHHHHHHHHHhcC-CCcceEEEEeCCCcee
Q 042745 248 CVEGSSLASMGCARVLVFVAEKD-KLAARGWLYYEKLKESG-WKGRAEIVETKGESHV 303 (331)
Q Consensus 248 ~~~~~~l~~~~~~Pvli~~G~~D-~~v~~~~~~~~~l~~~g-~~~~~~~~~~~g~~H~ 303 (331)
......+.++++ |+|++.|-.| .+...+...+++|+..+ . +.++++.|. .|+
T Consensus 218 ~~~~~~~~~i~v-P~l~v~Gw~D~~~~~~~~~~~~~l~~~~~~--~~~Liigpw-~H~ 271 (272)
T PF02129_consen 218 RSPSERLDKIDV-PVLIVGGWYDTLFLRGALRAYEALRAPGSK--PQRLIIGPW-THG 271 (272)
T ss_dssp TBHHHHHGG--S-EEEEEEETTCSSTSHHHHHHHHHHCTTSTC---EEEEEESE-STT
T ss_pred CChHHHHhhCCC-CEEEecccCCcccchHHHHHHHHhhcCCCC--CCEEEEeCC-CCC
Confidence 000003566777 9999999999 66678888999999887 4 678888775 563
No 101
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.42 E-value=6.7e-12 Score=115.09 Aligned_cols=239 Identities=15% Similarity=0.125 Sum_probs=161.7
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
+..+++....+ .||.+|+..+.. ++. .. .+.|++||-.||--+. ..+.|...+..++.+ |-+.+..+.
T Consensus 391 ~~~veQ~~atS---kDGT~IPYFiv~-K~~---~~-d~~pTll~aYGGF~vs---ltP~fs~~~~~WLer-Gg~~v~ANI 458 (648)
T COG1505 391 NYEVEQFFATS---KDGTRIPYFIVR-KGA---KK-DENPTLLYAYGGFNIS---LTPRFSGSRKLWLER-GGVFVLANI 458 (648)
T ss_pred CceEEEEEEEc---CCCccccEEEEe-cCC---cC-CCCceEEEeccccccc---cCCccchhhHHHHhc-CCeEEEEec
Confidence 44556666654 789999999998 775 12 3789999999854332 234466666666544 888889999
Q ss_pred CCCCCC-----------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 124 RRAPEN-----------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 124 r~~~~~-----------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
|+.++. .-...++|..++.++|.++. ...|+++++.|.|-||.++-.++++.++
T Consensus 459 RGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rg-----------itspe~lgi~GgSNGGLLvg~alTQrPe---- 523 (648)
T COG1505 459 RGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRG-----------ITSPEKLGIQGGSNGGLLVGAALTQRPE---- 523 (648)
T ss_pred ccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhC-----------CCCHHHhhhccCCCCceEEEeeeccChh----
Confidence 998763 23346789999999999874 2578999999999999999988888876
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCC----CCCCCCCCCCCccc-CCCCeEEEEEe
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDD----PWINPCVEGSSLAS-MGCARVLVFVA 267 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~-~~~~Pvli~~G 267 (331)
.+.+++.-.|.+|.-....-... ..|..-|++. .+..+ ...||+. +++. ..-||+||..+
T Consensus 524 --lfgA~v~evPllDMlRYh~l~aG---------~sW~~EYG~P-d~P~d~~~l~~YSPy~---nl~~g~kYP~~LITTs 588 (648)
T COG1505 524 --LFGAAVCEVPLLDMLRYHLLTAG---------SSWIAEYGNP-DDPEDRAFLLAYSPYH---NLKPGQKYPPTLITTS 588 (648)
T ss_pred --hhCceeeccchhhhhhhcccccc---------hhhHhhcCCC-CCHHHHHHHHhcCchh---cCCccccCCCeEEEcc
Confidence 78899999999986433221111 1111111111 01000 0123433 3332 33469999999
Q ss_pred CCCccc-h-hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 268 EKDKLA-A-RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 268 ~~D~~v-~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
++|..| | +++.|+.+|++.+. ++-+++--+++|+-.. + ..+.-.-...+..||.+.+
T Consensus 589 ~~DDRVHPaHarKfaa~L~e~~~--pv~~~e~t~gGH~g~~--~-~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 589 LHDDRVHPAHARKFAAKLQEVGA--PVLLREETKGGHGGAA--P-TAEIARELADLLAFLLRTL 647 (648)
T ss_pred cccccccchHHHHHHHHHHhcCC--ceEEEeecCCcccCCC--C-hHHHHHHHHHHHHHHHHhh
Confidence 999666 5 89999999999987 8888887788996441 1 1222334456677888765
No 102
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.39 E-value=3.8e-11 Score=103.57 Aligned_cols=216 Identities=16% Similarity=0.183 Sum_probs=126.0
Q ss_pred CCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC------CCChHHHHHHHHHHHHHhccCC
Q 042745 79 NNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP------VPCAHDDSWAAIKWVASHVNGS 152 (331)
Q Consensus 79 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~------~~~~~~d~~~~~~~l~~~~~~~ 152 (331)
..+.|.++++|| ..|+..+ |..+.+.++.+.+.-|..+|-|.++..+ +....+|+...+++....
T Consensus 49 ~~~~Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~---- 119 (315)
T KOG2382|consen 49 LERAPPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGS---- 119 (315)
T ss_pred cCCCCceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccc----
Confidence 367899999999 7888876 7888899998999999999999887643 334556666666665543
Q ss_pred CCCccccccCCCCeEEEeeCCchH-HHHHHHHHhhcccccCCCceeEEEE--ecccccCCCCC------------CCC--
Q 042745 153 GPEDWLNRYADFQRVFFAGDSAGA-NIAHHMGIRNGREILDGFNVAGIVL--VHPYFWGSTPV------------GNE-- 215 (331)
Q Consensus 153 ~~~~~~~~~~d~~~i~l~G~S~GG-~~Al~~a~~~~~~~~~~~~i~~~i~--~~p~~~~~~~~------------~~~-- 215 (331)
....++.|.|||||| .+++..+...++ .+..+|. ++|........ ...
T Consensus 120 ---------~~~~~~~l~GHsmGG~~~~m~~t~~~p~------~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~ 184 (315)
T KOG2382|consen 120 ---------TRLDPVVLLGHSMGGVKVAMAETLKKPD------LIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIG 184 (315)
T ss_pred ---------cccCCceecccCcchHHHHHHHHHhcCc------ccceeEEEecCCccCCcccchHHHHHHHHHhcccccc
Confidence 234689999999999 555666666554 3444443 34521110000 000
Q ss_pred --ccCch---------hhhHHHHHH-HhhccCCCCCCCCCCCC-------------CCCCCCCc--ccCCCCeEEEEEeC
Q 042745 216 --TTDAK---------HRAFFDGIW-RMGYRSETNGCDDPWIN-------------PCVEGSSL--ASMGCARVLVFVAE 268 (331)
Q Consensus 216 --~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~l--~~~~~~Pvli~~G~ 268 (331)
..... .......+. ..+.+.. ......+.- ......++ ..... |+++++|.
T Consensus 185 ~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~-~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~-pvlfi~g~ 262 (315)
T KOG2382|consen 185 VSRGRKEALKSLIEVGFDNLVRQFILTNLKKSP-SDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTG-PVLFIKGL 262 (315)
T ss_pred ccccHHHHHHHHHHHhcchHHHHHHHHhcCcCC-CCCceEEEeCHHHHHHHHHHHHhhccccccccccccc-ceeEEecC
Confidence 00000 000111111 1111011 010000000 00000022 22233 99999999
Q ss_pred CCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 269 KDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 269 ~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
++.+++.. ....++..-. +++++.+++++|.... ++.+++.+.|.+|+.++.
T Consensus 263 ~S~fv~~~--~~~~~~~~fp--~~e~~~ld~aGHwVh~-----E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 263 QSKFVPDE--HYPRMEKIFP--NVEVHELDEAGHWVHL-----EKPEEFIESISEFLEEPE 314 (315)
T ss_pred CCCCcChh--HHHHHHHhcc--chheeecccCCceeec-----CCHHHHHHHHHHHhcccC
Confidence 99998722 2234444433 6899999999997774 455899999999998764
No 103
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.39 E-value=1.7e-11 Score=101.73 Aligned_cols=129 Identities=15% Similarity=0.298 Sum_probs=98.2
Q ss_pred CceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHH
Q 042745 61 NALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWA 140 (331)
Q Consensus 61 ~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~ 140 (331)
-..++.|+.|... +..|+|+|+|| |..-+. .|...+..++ ++||+|++|+....-.-.....++++..
T Consensus 31 pPkpLlI~tP~~~------G~yPVilF~HG--~~l~ns---~Ys~lL~HIA-SHGfIVVAPQl~~~~~p~~~~Ei~~aa~ 98 (307)
T PF07224_consen 31 PPKPLLIVTPSEA------GTYPVILFLHG--FNLYNS---FYSQLLAHIA-SHGFIVVAPQLYTLFPPDGQDEIKSAAS 98 (307)
T ss_pred CCCCeEEecCCcC------CCccEEEEeec--hhhhhH---HHHHHHHHHh-hcCeEEEechhhcccCCCchHHHHHHHH
Confidence 3578899999887 88999999997 333332 3677888886 5699999999654322345567889999
Q ss_pred HHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 141 AIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 141 ~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
+++||......+.. .+...|.++++++|||.||-.|..+|+.+. . ...+.++|.+-|+-..
T Consensus 99 V~~WL~~gL~~~Lp---~~V~~nl~klal~GHSrGGktAFAlALg~a-~---~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 99 VINWLPEGLQHVLP---ENVEANLSKLALSGHSRGGKTAFALALGYA-T---SLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHHHhhhhhhCC---CCcccccceEEEeecCCccHHHHHHHhccc-c---cCchhheecccccCCC
Confidence 99999988655432 122367899999999999999999999775 2 2379999999888754
No 104
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=4.4e-11 Score=101.25 Aligned_cols=133 Identities=26% Similarity=0.280 Sum_probs=89.8
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec-CCCC
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD-YRRA 126 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d-yr~~ 126 (331)
+..++..+ +......+|.|... +++.|+||++||++. +........-+.++|.+.||.|+.|| |..+
T Consensus 36 ~~~s~~~~----g~~r~y~l~vP~g~-----~~~apLvv~LHG~~~---sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 36 SVASFDVN----GLKRSYRLYVPPGL-----PSGAPLVVVLHGSGG---SGAGQLHGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CccccccC----CCccceEEEcCCCC-----CCCCCEEEEEecCCC---ChHHhhcccchhhhhcccCcEEECcCccccc
Confidence 45555543 77899999999997 345599999999653 22211112234678888999999995 4332
Q ss_pred C--C--------CCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCce
Q 042745 127 P--E--------NPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNV 196 (331)
Q Consensus 127 ~--~--------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i 196 (331)
- . .+....+.|+....+-+.+...+++ +|+.||+|.|.|.||.|+..++...++ .+
T Consensus 104 wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~g--------idp~RVyvtGlS~GG~Ma~~lac~~p~------~f 169 (312)
T COG3509 104 WNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYG--------IDPARVYVTGLSNGGRMANRLACEYPD------IF 169 (312)
T ss_pred cCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcC--------cCcceEEEEeeCcHHHHHHHHHhcCcc------cc
Confidence 1 1 1112334455444444444444555 999999999999999999999998876 67
Q ss_pred eEEEEecccc
Q 042745 197 AGIVLVHPYF 206 (331)
Q Consensus 197 ~~~i~~~p~~ 206 (331)
.++..+++..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 7777766554
No 105
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.36 E-value=8.5e-11 Score=109.24 Aligned_cols=244 Identities=18% Similarity=0.152 Sum_probs=158.3
Q ss_pred EEeecCcEEEeccCCCCCCCCCCCCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCC
Q 042745 19 RVYKDGRVERFVGNDTVPPSFDPKTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETP 98 (331)
Q Consensus 19 ~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~ 98 (331)
..+...+-.+.+....+|-.+++. ...++.+..+. +||..+++.+++-++. ...++.|++++-.|... ..
T Consensus 392 ~~dm~t~er~~LkqqeV~~g~dp~-~Y~s~riwa~a---~dgv~VPVSLvyrkd~---~~~g~~p~lLygYGaYG---~s 461 (682)
T COG1770 392 DYDMATGERTLLKQQEVPGGFDPE-DYVSRRIWATA---DDGVQVPVSLVYRKDT---KLDGSAPLLLYGYGAYG---IS 461 (682)
T ss_pred EeeccCCcEEEEEeccCCCCCChh-HeEEEEEEEEc---CCCcEeeEEEEEeccc---CCCCCCcEEEEEecccc---cc
Confidence 334444444445554455444443 33456666664 6789999999998885 35689999999999543 33
Q ss_pred CCchhHHHHHHHHhcCCeEEEEecCCCCCCC-----------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeE
Q 042745 99 FSPFYHSYLNALVSACNVVAVSVDYRRAPEN-----------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRV 167 (331)
Q Consensus 99 ~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-----------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i 167 (331)
..+.|...+-.|+. .|++....--|+.++- .-...+.|..++.++|.++. +.++++|
T Consensus 462 ~~p~Fs~~~lSLlD-RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g-----------~~~~~~i 529 (682)
T COG1770 462 MDPSFSIARLSLLD-RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG-----------YTSPDRI 529 (682)
T ss_pred CCcCcccceeeeec-CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcC-----------cCCccce
Confidence 33335544445554 4999888888887642 22345789999999999874 3788999
Q ss_pred EEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCC-------ccCchhhhHHHHHHHhhccCCCCCC
Q 042745 168 FFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNE-------TTDAKHRAFFDGIWRMGYRSETNGC 240 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++.|.|+||++...++-+.++ .++++|+..|+.+.....-.. .-.....+.-...+.++.
T Consensus 530 ~a~GGSAGGmLmGav~N~~P~------lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yik------- 596 (682)
T COG1770 530 VAIGGSAGGMLMGAVANMAPD------LFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIK------- 596 (682)
T ss_pred EEeccCchhHHHHHHHhhChh------hhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHh-------
Confidence 999999999999999888776 799999999998754321110 001111111111111110
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcc-eEEEEeCCCcee
Q 042745 241 DDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGR-AEIVETKGESHV 303 (331)
Q Consensus 241 ~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~-~~~~~~~g~~H~ 303 (331)
.-||.. ++..-+-|++|++.|.+|+.|. +-.++..+|++.+.+.+ +-+..-..+||+
T Consensus 597 ---SYSPYd---NV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 597 ---SYSPYD---NVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred ---hcCchh---ccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCC
Confidence 123332 5555555699999999999886 67788889988754322 334444678995
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.34 E-value=2.1e-11 Score=99.47 Aligned_cols=183 Identities=18% Similarity=0.224 Sum_probs=97.4
Q ss_pred EEEEcCCcccccCCCCchhHHHHHHHHhcCC--eEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccC
Q 042745 85 LVYIHGGGFCIETPFSPFYHSYLNALVSACN--VVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYA 162 (331)
Q Consensus 85 vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G--~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 162 (331)
|||+|| +.++... .-...+++.+.+.+ ..++.+++... .+++.+.++-+... .
T Consensus 2 ilYlHG---F~Ssp~S-~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------p~~a~~~l~~~i~~-------------~ 56 (187)
T PF05728_consen 2 ILYLHG---FNSSPQS-FKAQALKQYFAEHGPDIQYPCPDLPPF--------PEEAIAQLEQLIEE-------------L 56 (187)
T ss_pred eEEecC---CCCCCCC-HHHHHHHHHHHHhCCCceEECCCCCcC--------HHHHHHHHHHHHHh-------------C
Confidence 899998 3334332 12234455555544 45555554432 34444444444443 3
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCC
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDD 242 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
..+++.|+|.|+||+.|..++.++. +++ |+++|.+............... ..|.. . .....
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~--------~~a-vLiNPav~p~~~l~~~iG~~~~-----~~~~e----~-~~~~~ 117 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYG--------LPA-VLINPAVRPYELLQDYIGEQTN-----PYTGE----S-YELTE 117 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhC--------CCE-EEEcCCCCHHHHHHHhhCcccc-----CCCCc----c-ceech
Confidence 4456999999999999999998884 444 8889888643221110000000 00000 0 00000
Q ss_pred CCCCCCCCCCCcccCCCC-eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHH
Q 042745 243 PWINPCVEGSSLASMGCA-RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQI 321 (331)
Q Consensus 243 ~~~~~~~~~~~l~~~~~~-Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i 321 (331)
.....+..- .+..+..| ++++++++.|.+++..+. ..+.+. +...+.+|.+|.|..+ .+.+..|
T Consensus 118 ~~~~~l~~l-~~~~~~~~~~~lvll~~~DEvLd~~~a-~~~~~~------~~~~i~~ggdH~f~~f-------~~~l~~i 182 (187)
T PF05728_consen 118 EHIEELKAL-EVPYPTNPERYLVLLQTGDEVLDYREA-VAKYRG------CAQIIEEGGDHSFQDF-------EEYLPQI 182 (187)
T ss_pred HhhhhcceE-eccccCCCccEEEEEecCCcccCHHHH-HHHhcC------ceEEEEeCCCCCCccH-------HHHHHHH
Confidence 000000000 11111111 899999999999985322 223322 3345667789988733 6788899
Q ss_pred HHHhh
Q 042745 322 ASFFN 326 (331)
Q Consensus 322 ~~fl~ 326 (331)
++|+.
T Consensus 183 ~~f~~ 187 (187)
T PF05728_consen 183 IAFLQ 187 (187)
T ss_pred HHhhC
Confidence 99874
No 107
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.34 E-value=1.3e-11 Score=118.61 Aligned_cols=129 Identities=26% Similarity=0.444 Sum_probs=97.9
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhH-HHHHHHHhcCCeEEEEecCCCCC---------C
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYH-SYLNALVSACNVVAVSVDYRRAP---------E 128 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~-~~~~~la~~~G~~vv~~dyr~~~---------~ 128 (331)
+.+++++++|.|.... ..+ .|++||+||||+..|+... +. ......+....++||.++||+.. .
T Consensus 93 sEDCLylNV~tp~~~~---~~~-~pV~V~iHGG~~~~gs~~~--~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~ 166 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQGCS---ESK-LPVMVYIHGGGFQFGSASS--FEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA 166 (545)
T ss_pred cCCCceEEEeccCCCc---cCC-CCEEEEEeCCceeeccccc--hhhcCchhccccCCEEEEEecccceeceeeecCCCC
Confidence 3789999999999872 112 9999999999999888643 21 11233444557999999999862 1
Q ss_pred CCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 129 NPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 129 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
.+....+.|...|++|++++...+| .|+++|.|+|||+||..+..++......+ .+..+|..|+.
T Consensus 167 ~~gN~gl~Dq~~AL~wv~~~I~~FG--------Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~----LF~~aI~~SG~ 231 (545)
T KOG1516|consen 167 APGNLGLFDQLLALRWVKDNIPSFG--------GDPKNVTLFGHSAGAASVSLLTLSPHSRG----LFHKAISMSGN 231 (545)
T ss_pred CCCcccHHHHHHHHHHHHHHHHhcC--------CCCCeEEEEeechhHHHHHHHhcCHhhHH----HHHHHHhhccc
Confidence 2345678899999999999999998 99999999999999999988876554433 46666655543
No 108
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.34 E-value=3.2e-10 Score=106.69 Aligned_cols=131 Identities=14% Similarity=0.124 Sum_probs=85.9
Q ss_pred cceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCC---cccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 47 SKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGG---GFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGg---g~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
..+|.+. ...+.+.-|.|... ....+.||++||- .|+..-.. ...+++.++. .||.|+.+|+
T Consensus 164 pg~VV~~------~~~~eLi~Y~P~t~-----~~~~~PlLiVp~~i~k~yilDL~p---~~Slv~~L~~-qGf~V~~iDw 228 (532)
T TIGR01838 164 PGAVVFE------NELFQLIQYEPTTE-----TVHKTPLLIVPPWINKYYILDLRP---QNSLVRWLVE-QGHTVFVISW 228 (532)
T ss_pred CCeEEEE------CCcEEEEEeCCCCC-----cCCCCcEEEECcccccceeeeccc---chHHHHHHHH-CCcEEEEEEC
Confidence 3467776 45778888888765 2356779999983 12211110 1367777764 5999999999
Q ss_pred CCCCCC----CCCChH-HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHH----HHHhhcccccCCC
Q 042745 124 RRAPEN----PVPCAH-DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHH----MGIRNGREILDGF 194 (331)
Q Consensus 124 r~~~~~----~~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~----~a~~~~~~~~~~~ 194 (331)
|+.+.. .+.... +++.++++.+.+. .+.++|.++|||+||.+++. ++..... .
T Consensus 229 rgpg~s~~~~~~ddY~~~~i~~al~~v~~~-------------~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~-----~ 290 (532)
T TIGR01838 229 RNPDASQADKTFDDYIRDGVIAALEVVEAI-------------TGEKQVNCVGYCIGGTLLSTALAYLAARGDD-----K 290 (532)
T ss_pred CCCCcccccCChhhhHHHHHHHHHHHHHHh-------------cCCCCeEEEEECcCcHHHHHHHHHHHHhCCC-----C
Confidence 986543 222333 4577888888865 45688999999999998643 2333211 1
Q ss_pred ceeEEEEecccccCCC
Q 042745 195 NVAGIVLVHPYFWGST 210 (331)
Q Consensus 195 ~i~~~i~~~p~~~~~~ 210 (331)
+++++++++..++...
T Consensus 291 rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 291 RIKSATFFTTLLDFSD 306 (532)
T ss_pred ccceEEEEecCcCCCC
Confidence 6899998887766543
No 109
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.34 E-value=5.7e-11 Score=95.79 Aligned_cols=130 Identities=17% Similarity=0.161 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCC
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNE 215 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~ 215 (331)
..+.+.+.+|.++-...| ++.+||++.|.|+||.+|+..+..++. .+.+++..++++-.....
T Consensus 72 ~~aa~~i~~Li~~e~~~G--------i~~~rI~igGfs~G~a~aL~~~~~~~~------~l~G~~~~s~~~p~~~~~--- 134 (206)
T KOG2112|consen 72 HRAADNIANLIDNEPANG--------IPSNRIGIGGFSQGGALALYSALTYPK------ALGGIFALSGFLPRASIG--- 134 (206)
T ss_pred HHHHHHHHHHHHHHHHcC--------CCccceeEcccCchHHHHHHHHhcccc------ccceeeccccccccchhh---
Confidence 344556666666655555 999999999999999999999998843 688888888777421100
Q ss_pred ccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceE
Q 042745 216 TTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAE 293 (331)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~ 293 (331)
++.. -+ ... .+|++..||+.|++|| -+...++.|+..+. .++
T Consensus 135 -----------------~~~~---------~~-----~~~---~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~--~~~ 178 (206)
T KOG2112|consen 135 -----------------LPGW---------LP-----GVN---YTPILLCHGTADPLVPFRFGEKSAQFLKSLGV--RVT 178 (206)
T ss_pred -----------------ccCC---------cc-----ccC---cchhheecccCCceeehHHHHHHHHHHHHcCC--cee
Confidence 0000 00 000 1299999999999998 57788899999998 799
Q ss_pred EEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 294 IVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 294 ~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
++.|+|..|... .+-+.++..|+++
T Consensus 179 f~~y~g~~h~~~---------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 179 FKPYPGLGHSTS---------PQELDDLKSWIKT 203 (206)
T ss_pred eeecCCcccccc---------HHHHHHHHHHHHH
Confidence 999999999644 5668888888876
No 110
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.33 E-value=5e-12 Score=109.27 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=115.5
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcC-CcccccCCCCchhHHHHHHHHhcC---CeEEEEecCCCCC-C------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHG-GGFCIETPFSPFYHSYLNALVSAC---NVVAVSVDYRRAP-E------ 128 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HG-gg~~~g~~~~~~~~~~~~~la~~~---G~~vv~~dyr~~~-~------ 128 (331)
+....+.||.|++. +..++.|+|+++|| ++|..... ....+..+..+. -.++|+++..... .
T Consensus 5 g~~~~~~VylP~~y---~~~~~~PvlylldG~~~~~~~~~----~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~ 77 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY---DPSKPYPVLYLLDGQSGWFRNGN----AQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYL 77 (251)
T ss_dssp TEEEEEEEEECTTG---GTTTTEEEEEEESHTTHHHHHHH----HHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTS
T ss_pred CCeEEEEEEECCCC---CCCCCCEEEEEccCCccccccch----HHHHHHHHHHhCCCCceEEEEEeccccccccccccc
Confidence 45689999999996 35689999999999 55543221 223444444442 1444555433221 0
Q ss_pred -------CCCC---ChHHH-H-HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCce
Q 042745 129 -------NPVP---CAHDD-S-WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNV 196 (331)
Q Consensus 129 -------~~~~---~~~~d-~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i 196 (331)
.... ....+ + ...+.++.++.. +++++.+|+|+||||..|+.++.++++ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~-----------~~~~~~~i~G~S~GG~~Al~~~l~~Pd------~F 140 (251)
T PF00756_consen 78 PAGSSRRADDSGGGDAYETFLTEELIPYIEANYR-----------TDPDRRAIAGHSMGGYGALYLALRHPD------LF 140 (251)
T ss_dssp SBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSS-----------EEECCEEEEEETHHHHHHHHHHHHSTT------TE
T ss_pred ccccccccccCCCCcccceehhccchhHHHHhcc-----------cccceeEEeccCCCcHHHHHHHHhCcc------cc
Confidence 0000 11222 2 256667777643 455559999999999999999999987 89
Q ss_pred eEEEEecccccCCCCCCCCccCch--hhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccc-
Q 042745 197 AGIVLVHPYFWGSTPVGNETTDAK--HRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLA- 273 (331)
Q Consensus 197 ~~~i~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v- 273 (331)
.+++++||.++............. ..... ...... .......++++..|+.|...
T Consensus 141 ~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~---------------------~~~~~~~~i~l~~G~~d~~~~ 198 (251)
T PF00756_consen 141 GAVIAFSGALDPSPSLWGPSDDEAWKENDPF-DLIKAL---------------------SQKKKPLRIYLDVGTKDEFGG 198 (251)
T ss_dssp SEEEEESEESETTHCHHHHSTCGHHGGCHHH-HHHHHH---------------------HHTTSEEEEEEEEETTSTTHH
T ss_pred ccccccCccccccccccCcCCcHHhhhccHH-HHhhhh---------------------hcccCCCeEEEEeCCCCcccc
Confidence 999999998765411100000000 00000 000000 00011117999999999732
Q ss_pred -----------hhHHHHHHHHHhcCCCcceEEEEeCCCceeeeec
Q 042745 274 -----------ARGWLYYEKLKESGWKGRAEIVETKGESHVFHLF 307 (331)
Q Consensus 274 -----------~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~ 307 (331)
.....+.+.|+..+. ...++.++| +|.+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~G-~H~~~~W 240 (251)
T PF00756_consen 199 WEDSAQILQFLANNRELAQLLKAKGI--PHTYHVFPG-GHDWAYW 240 (251)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCCCEEC--TTESEEEHS-ESSHHHH
T ss_pred cccCHHHHHHHHHhHhhHHHHHHcCC--CceEEEecC-ccchhhH
Confidence 233445555666777 788888885 7876644
No 111
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.31 E-value=5.6e-11 Score=102.43 Aligned_cols=230 Identities=13% Similarity=0.071 Sum_probs=83.0
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC----CCCCCCCCChHHHHHHHHHHHHHhccCCCCCc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR----RAPENPVPCAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
+.-+||||-|=+ .|-. ...|..-+...+...|+.++-+..+ +.+........+|+..+++||+.....
T Consensus 32 ~~~~llfIGGLt--DGl~-tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g----- 103 (303)
T PF08538_consen 32 APNALLFIGGLT--DGLL-TVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG----- 103 (303)
T ss_dssp SSSEEEEE--TT----TT--STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEECCCC--CCCC-CCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-----
Confidence 455899998722 1222 2224444555556679999988755 455556667789999999999997310
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCC
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSE 236 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
....++|+|+|||-|.+-++.++.+...... ...|.|+|+.+|+-|-..............+......+......
T Consensus 104 ----~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~-~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~ 178 (303)
T PF08538_consen 104 ----HFGREKIVLMGHSTGCQDVLHYLSSPNPSPS-RPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGK 178 (303)
T ss_dssp --------S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-
T ss_pred ----ccCCccEEEEecCCCcHHHHHHHhccCcccc-ccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCC
Confidence 0256899999999999999999987653110 13799999999988654332211110111111111111110000
Q ss_pred CCCCCCC--C------CCCCCC---------------------CC----CcccCCCCeEEEEEeCCCccch---hHHHHH
Q 042745 237 TNGCDDP--W------INPCVE---------------------GS----SLASMGCARVLVFVAEKDKLAA---RGWLYY 280 (331)
Q Consensus 237 ~~~~~~~--~------~~~~~~---------------------~~----~l~~~~~~Pvli~~G~~D~~v~---~~~~~~ 280 (331)
.....+ . -.|+.+ ++ .+..+.. |+|++.+++|..|| +-+.+.
T Consensus 179 -~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~-plLvl~Sg~DEyvP~~vdk~~Ll 256 (303)
T PF08538_consen 179 -GDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSK-PLLVLYSGKDEYVPPWVDKEALL 256 (303)
T ss_dssp -TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT------------
T ss_pred -CCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCC-ceEEEecCCCceecccccccccc
Confidence 000000 0 011111 11 3444666 99999999999998 334566
Q ss_pred HHHHhcCCCc--ceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 281 EKLKESGWKG--RAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 281 ~~l~~~g~~~--~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
++++.+-.+. ...--++||++|.+.... .....+.+++++..||+
T Consensus 257 ~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~-~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 257 ERWKAATNPKIWSPLSGIIPGASHNVSGPS-QAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccccCC
Confidence 6666543200 122348899999876221 11123567888888885
No 112
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.31 E-value=2.1e-11 Score=110.70 Aligned_cols=193 Identities=16% Similarity=0.187 Sum_probs=100.4
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-------------CC-------------CC-
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-------------NP-------------VP- 132 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-------------~~-------------~~- 132 (331)
++.|+|||-||- .|++.. |..++..||.+ ||+|++++.|-... .. +.
T Consensus 98 ~~~PvvIFSHGl---gg~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGL---GGSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--T---T--TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCC---Ccchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 679999999993 455554 88999999865 99999999884210 00 00
Q ss_pred ----C-----------hHHHHHHHHHHHHHhccCCCCC-------cc--ccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 133 ----C-----------AHDDSWAAIKWVASHVNGSGPE-------DW--LNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 133 ----~-----------~~~d~~~~~~~l~~~~~~~~~~-------~~--~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
. -..|+..+++.|.......... +| ....+|.++|+++|||+||..|+.++.+..
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~- 250 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT- 250 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T-
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc-
Confidence 0 1246677777776432110000 01 112367899999999999999999888763
Q ss_pred cccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeC
Q 042745 189 EILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAE 268 (331)
Q Consensus 189 ~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~ 268 (331)
+++++|++-||...... . ....++. |+|+++.+
T Consensus 251 ------r~~~~I~LD~W~~Pl~~-------------------------------~---------~~~~i~~-P~L~InSe 283 (379)
T PF03403_consen 251 ------RFKAGILLDPWMFPLGD-------------------------------E---------IYSKIPQ-PLLFINSE 283 (379)
T ss_dssp ------T--EEEEES---TTS-G-------------------------------G---------GGGG--S--EEEEEET
T ss_pred ------CcceEEEeCCcccCCCc-------------------------------c---------cccCCCC-CEEEEECc
Confidence 79999999888742110 0 1122333 99999877
Q ss_pred CCccch-hHHHHHHHHHhcCCCcceEEEEeCCCceeeee----cCCC--------------cHHHHHHHHHHHHHhhccC
Q 042745 269 KDKLAA-RGWLYYEKLKESGWKGRAEIVETKGESHVFHL----FNPN--------------SENARVMLQQIASFFNLQD 329 (331)
Q Consensus 269 ~D~~v~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~----~~~~--------------~~~~~~~~~~i~~fl~~~~ 329 (331)
. .... ....+.+ +...+. ...++.++|..|.-.. ..|. ....+...+.+++||++++
T Consensus 284 ~-f~~~~~~~~~~~-~~~~~~--~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L 359 (379)
T PF03403_consen 284 S-FQWWENIFRMKK-VISNNK--ESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHL 359 (379)
T ss_dssp T-T--HHHHHHHHT-T--TTS---EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCChhhHHHHHH-HhccCC--CcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 5 2222 2222222 323333 6788899999997321 1121 0123445567889999885
Q ss_pred C
Q 042745 330 K 330 (331)
Q Consensus 330 ~ 330 (331)
+
T Consensus 360 ~ 360 (379)
T PF03403_consen 360 G 360 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 113
>PRK05855 short chain dehydrogenase; Validated
Probab=99.28 E-value=5e-11 Score=115.46 Aligned_cols=86 Identities=16% Similarity=0.110 Sum_probs=54.3
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC-----ChHHHHHHHHHHHHHhccCCCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP-----CAHDDSWAAIKWVASHVNGSGPE 155 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~ 155 (331)
..|+|||+||.+. +.. .|..++..+ .+ ||.|+++|+|+++....+ ..+++....+..+.+.
T Consensus 24 ~~~~ivllHG~~~---~~~--~w~~~~~~L-~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~------- 89 (582)
T PRK05855 24 DRPTVVLVHGYPD---NHE--VWDGVAPLL-AD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDA------- 89 (582)
T ss_pred CCCeEEEEcCCCc---hHH--HHHHHHHHh-hc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHH-------
Confidence 3689999999542 222 255555555 34 899999999998764321 1233333333333222
Q ss_pred ccccccCCC-CeEEEeeCCchHHHHHHHHHhh
Q 042745 156 DWLNRYADF-QRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 156 ~~~~~~~d~-~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
... .++.|+||||||.+++.++.+.
T Consensus 90 ------l~~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 90 ------VSPDRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred ------hCCCCcEEEEecChHHHHHHHHHhCc
Confidence 222 3499999999999998887663
No 114
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=1.4e-10 Score=107.03 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=154.8
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
..+.+.+.|++ .||..+++.|.+-++. ...+++|.+|+.|||..+.-... |..-..-+. +.|.+.+..|-
T Consensus 438 ~y~~~r~~~~S---kDGt~VPM~Iv~kk~~---k~dg~~P~LLygYGay~isl~p~---f~~srl~ll-d~G~Vla~a~V 507 (712)
T KOG2237|consen 438 DYVVERIEVSS---KDGTKVPMFIVYKKDI---KLDGSKPLLLYGYGAYGISLDPS---FRASRLSLL-DRGWVLAYANV 507 (712)
T ss_pred ceEEEEEEEec---CCCCccceEEEEechh---hhcCCCceEEEEecccceeeccc---cccceeEEE-ecceEEEEEee
Confidence 44567788886 7899999999996665 34578999999999755443332 333222333 46999999999
Q ss_pred CCCCCCC-----------CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 124 RRAPENP-----------VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 124 r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
|+.++.. -...+.|..++.++|..+. +..+++..+.|.|+||.++..+.-+.++
T Consensus 508 RGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g-----------yt~~~kL~i~G~SaGGlLvga~iN~rPd---- 572 (712)
T KOG2237|consen 508 RGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG-----------YTQPSKLAIEGGSAGGLLVGACINQRPD---- 572 (712)
T ss_pred ccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC-----------CCCccceeEecccCccchhHHHhccCch----
Confidence 9987632 2345789999999999874 3788999999999999999998888876
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCC---CCCCCCCCCCCCCCCcc-cCCCCeEEEEEeC
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETN---GCDDPWINPCVEGSSLA-SMGCARVLVFVAE 268 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~-~~~~~Pvli~~G~ 268 (331)
.+.++|+-.|+++........... .|..-++.... ....-.++|+..-.++. ...-|-+||..+.
T Consensus 573 --LF~avia~VpfmDvL~t~~~tilp---------lt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~ 641 (712)
T KOG2237|consen 573 --LFGAVIAKVPFMDVLNTHKDTILP---------LTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTAD 641 (712)
T ss_pred --HhhhhhhcCcceehhhhhccCccc---------cchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeecc
Confidence 799999999999864432111100 01000000000 00111122222111111 1123579999999
Q ss_pred CCccch--hHHHHHHHHHhcC---C--CcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 269 KDKLAA--RGWLYYEKLKESG---W--KGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 269 ~D~~v~--~~~~~~~~l~~~g---~--~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+|..|. ++..+..+|+..- . .-++-+.+..+++|+.. .+.....+ -.....+||.+.
T Consensus 642 hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~--~~~~k~~~-E~a~~yaFl~K~ 705 (712)
T KOG2237|consen 642 HDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAE--KPRFKQIE-EAAFRYAFLAKM 705 (712)
T ss_pred CCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccC--CchHHHHH-HHHHHHHHHHHH
Confidence 986664 7777777777531 0 01577889999999644 22222222 233445666554
No 115
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.27 E-value=1.4e-10 Score=105.87 Aligned_cols=68 Identities=21% Similarity=0.337 Sum_probs=53.7
Q ss_pred CcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCC-CceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 253 SLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKG-ESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 253 ~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
.+..+++ |+|+++|+.|.+++ .++.+++.+...+. +++++++++ .+|... .++.+++.+.|.+||++.
T Consensus 318 ~L~~I~~-PtLvI~G~~D~l~p~~~~~~la~~lp~~~~--~a~l~~I~s~~GH~~~-----le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 318 ALSNIEA-NVLMIPCKQDLLQPPRYNYKMVDILQKQGK--YAEVYEIESINGHMAG-----VFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred HHhcCCC-CEEEEEeCCCCCCCHHHHHHHHHHhhhcCC--CeEEEEECCCCCcchh-----hcCHHHHHHHHHHHHccc
Confidence 3456777 99999999999886 56778888877655 789999985 899644 456688999999999763
No 116
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.25 E-value=5.4e-11 Score=106.55 Aligned_cols=130 Identities=28% Similarity=0.414 Sum_probs=98.3
Q ss_pred CCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC----------CC
Q 042745 59 NSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA----------PE 128 (331)
Q Consensus 59 ~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~----------~~ 128 (331)
..+++++++|.|... +.+.-++|+|.||||..|+.....|.. +.+++..+.+|++++||.+ ++
T Consensus 117 SEDCLYlNVW~P~~~-----p~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~e 189 (601)
T KOG4389|consen 117 SEDCLYLNVWAPAAD-----PYNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPE 189 (601)
T ss_pred ChhceEEEEeccCCC-----CCCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCC
Confidence 367899999999522 133449999999999999987655554 4566666899999999964 44
Q ss_pred CCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 129 NPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 129 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
.+..-.+-|-.-|++|++++...+| .|+++|.|+|.|+|+.-+..=+......+ .++..|+.|+-++
T Consensus 190 aPGNmGl~DQqLAl~WV~~Ni~aFG--------Gnp~~vTLFGESAGaASv~aHLlsP~S~g----lF~raIlQSGS~~ 256 (601)
T KOG4389|consen 190 APGNMGLLDQQLALQWVQENIAAFG--------GNPSRVTLFGESAGAASVVAHLLSPGSRG----LFHRAILQSGSLN 256 (601)
T ss_pred CCCccchHHHHHHHHHHHHhHHHhC--------CCcceEEEeccccchhhhhheecCCCchh----hHHHHHhhcCCCC
Confidence 5666678899999999999999999 99999999999999865543332233332 5777777776554
No 117
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.24 E-value=7.7e-10 Score=113.24 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=76.4
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhH-----HHHHHHHhcCCeEEEEec
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYH-----SYLNALVSACNVVAVSVD 122 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~-----~~~~~la~~~G~~vv~~d 122 (331)
.+|.+. ...+.+.-|.|...+.+ .....|.||++||.+ .+... |. .++..+. +.||.|+.+|
T Consensus 40 ~~vv~~------~~~~~l~~y~~~~~~~~-~~~~~~plllvhg~~---~~~~~--~d~~~~~s~v~~L~-~~g~~v~~~d 106 (994)
T PRK07868 40 FQIVES------VPMYRLRRYFPPDNRPG-QPPVGPPVLMVHPMM---MSADM--WDVTRDDGAVGILH-RAGLDPWVID 106 (994)
T ss_pred CcEEEE------cCcEEEEEeCCCCcccc-ccCCCCcEEEECCCC---CCccc--eecCCcccHHHHHH-HCCCEEEEEc
Confidence 566676 45778888888664110 023568999999843 22211 22 2355554 5599999999
Q ss_pred CCCCCCC--CC-CChHHHH---HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCce
Q 042745 123 YRRAPEN--PV-PCAHDDS---WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNV 196 (331)
Q Consensus 123 yr~~~~~--~~-~~~~~d~---~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i 196 (331)
+..+... .. ....+++ .++++.++.. ..+++.|+||||||.+++.++...... +|
T Consensus 107 ~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~--------------~~~~v~lvG~s~GG~~a~~~aa~~~~~-----~v 167 (994)
T PRK07868 107 FGSPDKVEGGMERNLADHVVALSEAIDTVKDV--------------TGRDVHLVGYSQGGMFCYQAAAYRRSK-----DI 167 (994)
T ss_pred CCCCChhHcCccCCHHHHHHHHHHHHHHHHHh--------------hCCceEEEEEChhHHHHHHHHHhcCCC-----cc
Confidence 8643221 11 1222333 3333333322 225799999999999999888754321 68
Q ss_pred eEEEEeccccc
Q 042745 197 AGIVLVHPYFW 207 (331)
Q Consensus 197 ~~~i~~~p~~~ 207 (331)
+.+++++..++
T Consensus 168 ~~lvl~~~~~d 178 (994)
T PRK07868 168 ASIVTFGSPVD 178 (994)
T ss_pred ceEEEEecccc
Confidence 88887665544
No 118
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.24 E-value=1.3e-09 Score=83.69 Aligned_cols=183 Identities=14% Similarity=0.181 Sum_probs=112.0
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-----C-C--CCChH-HHHHHHHHHHHHhccC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-----N-P--VPCAH-DDSWAAIKWVASHVNG 151 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-----~-~--~~~~~-~d~~~~~~~l~~~~~~ 151 (331)
.--+||+-||.|..+.+.. ....+..++ ..|+.|+.+++..... . + ....+ .....++..|...
T Consensus 13 ~~~tilLaHGAGasmdSt~---m~~~a~~la-~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~--- 85 (213)
T COG3571 13 APVTILLAHGAGASMDSTS---MTAVAAALA-RRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG--- 85 (213)
T ss_pred CCEEEEEecCCCCCCCCHH---HHHHHHHHH-hCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc---
Confidence 4457899999887666543 345556665 4599999999754311 0 1 11122 3334455555554
Q ss_pred CCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe-cccccCCCCCCCCccCchhhhHHHHHHH
Q 042745 152 SGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV-HPYFWGSTPVGNETTDAKHRAFFDGIWR 230 (331)
Q Consensus 152 ~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
.+....++.|+||||.+|..++..... .|.+++++ +|+.-....
T Consensus 86 ----------l~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGKP------------------- 130 (213)
T COG3571 86 ----------LAEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGKP------------------- 130 (213)
T ss_pred ----------ccCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCCc-------------------
Confidence 455689999999999999998877643 58888877 455532111
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCC-
Q 042745 231 MGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNP- 309 (331)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~- 309 (331)
...... .+..+.. |++|++|+.|.+-...+ .+...-+. +.+++.+.++.|.+--...
T Consensus 131 ----------e~~Rt~------HL~gl~t-Ptli~qGtrD~fGtr~~-Va~y~ls~----~iev~wl~~adHDLkp~k~v 188 (213)
T COG3571 131 ----------EQLRTE------HLTGLKT-PTLITQGTRDEFGTRDE-VAGYALSD----PIEVVWLEDADHDLKPRKLV 188 (213)
T ss_pred ----------ccchhh------hccCCCC-CeEEeecccccccCHHH-HHhhhcCC----ceEEEEeccCcccccccccc
Confidence 000000 5566666 99999999998863211 12222222 6799999999998642220
Q ss_pred --C--cHHHHHHHHHHHHHhhc
Q 042745 310 --N--SENARVMLQQIASFFNL 327 (331)
Q Consensus 310 --~--~~~~~~~~~~i~~fl~~ 327 (331)
. ...-.-..+.+..|..+
T Consensus 189 sgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 189 SGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccccHHHHHHHHHHHHHHHHhh
Confidence 0 12233445567777764
No 119
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.19 E-value=3.1e-10 Score=96.32 Aligned_cols=194 Identities=16% Similarity=0.191 Sum_probs=123.6
Q ss_pred CCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC---------C-------------------CC
Q 042745 79 NNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP---------E-------------------NP 130 (331)
Q Consensus 79 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~---------~-------------------~~ 130 (331)
..++|+|||-|| ..|++.- |..+|..+|. +||+|.+++.|-.. . ..
T Consensus 115 ~~k~PvvvFSHG---LggsRt~--YSa~c~~LAS-hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 115 NDKYPVVVFSHG---LGGSRTL--YSAYCTSLAS-HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCccEEEEecc---cccchhh--HHHHhhhHhh-CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 478999999999 3455544 8899999975 59999999988321 0 00
Q ss_pred -C-------CChHHHHHHHHHHHHHhccC------C-C-CCcccc--ccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 131 -V-------PCAHDDSWAAIKWVASHVNG------S-G-PEDWLN--RYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 131 -~-------~~~~~d~~~~~~~l~~~~~~------~-~-~~~~~~--~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
+ -...+.+..|++-|.+.... + + --+|+. ..+|.++++|+|||.||..+........
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t----- 263 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT----- 263 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-----
Confidence 0 01235666677666554221 0 0 001111 2377889999999999999988776644
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCcc
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKL 272 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~ 272 (331)
.+++.|++-.|..+.+. . ...+.+. |++++. ..|..
T Consensus 264 --~FrcaI~lD~WM~Pl~~---------------------------------------~-~~~~arq-P~~fin-v~~fQ 299 (399)
T KOG3847|consen 264 --DFRCAIALDAWMFPLDQ---------------------------------------L-QYSQARQ-PTLFIN-VEDFQ 299 (399)
T ss_pred --ceeeeeeeeeeecccch---------------------------------------h-hhhhccC-CeEEEE-ccccc
Confidence 69999988776632111 0 2222333 999998 44555
Q ss_pred chhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCC------------------cHHHHHHHHHHHHHhhccC
Q 042745 273 AARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPN------------------SENARVMLQQIASFFNLQD 329 (331)
Q Consensus 273 v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~------------------~~~~~~~~~~i~~fl~~~~ 329 (331)
..++....+++...+. .-.++.+.|.-|.-.-..|. .++-+-..+..++||++|+
T Consensus 300 ~~en~~vmKki~~~n~--g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 300 WNENLLVMKKIESQNE--GNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred chhHHHHHHhhhCCCc--cceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 5677777777766654 45788899999963211111 1234556778899999875
No 120
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.16 E-value=2.3e-10 Score=99.89 Aligned_cols=107 Identities=21% Similarity=0.271 Sum_probs=73.8
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHhccCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCA-------HDDSWAAIKWVASHVNGS 152 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~-------~~d~~~~~~~l~~~~~~~ 152 (331)
..+|++|++||.+ ++........+...++.+.++.|+++|++......++.. .+++...+++|.+..
T Consensus 34 ~~~p~vilIHG~~---~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~--- 107 (275)
T cd00707 34 PSRPTRFIIHGWT---SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT--- 107 (275)
T ss_pred CCCCcEEEEcCCC---CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 5678999999843 232111123334456555689999999997643333322 245566666665542
Q ss_pred CCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 153 GPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 153 ~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
+ .+.++|.|+|||+||++|..++.+.+. +++.++++.|..
T Consensus 108 g--------~~~~~i~lIGhSlGa~vAg~~a~~~~~------~v~~iv~LDPa~ 147 (275)
T cd00707 108 G--------LSLENVHLIGHSLGAHVAGFAGKRLNG------KLGRITGLDPAG 147 (275)
T ss_pred C--------CChHHEEEEEecHHHHHHHHHHHHhcC------ccceeEEecCCc
Confidence 1 667899999999999999999988764 699999987764
No 121
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.11 E-value=4e-09 Score=87.45 Aligned_cols=208 Identities=17% Similarity=0.189 Sum_probs=114.4
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 160 (331)
+..++.|-|-||. .. .|..|...+-. -+.++.+.|++-........+.|+....+-+.......
T Consensus 7 ~~~L~cfP~AGGs----a~--~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~-------- 70 (244)
T COG3208 7 RLRLFCFPHAGGS----AS--LFRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPP-------- 70 (244)
T ss_pred CceEEEecCCCCC----HH--HHHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccc--------
Confidence 4455666665542 21 15555554421 48899999998877666667788888888887765310
Q ss_pred cCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec---ccccCCCCCCCCccCchhhhHHHHHHHhhccCCC
Q 042745 161 YADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH---PYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSET 237 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
..-...+++||||||.+|..+|.+....++ .+.+++..+ |..+....... ..+ ...+..... +.+...
T Consensus 71 -~~d~P~alfGHSmGa~lAfEvArrl~~~g~---~p~~lfisg~~aP~~~~~~~i~~-~~D---~~~l~~l~~-lgG~p~ 141 (244)
T COG3208 71 -LLDAPFALFGHSMGAMLAFEVARRLERAGL---PPRALFISGCRAPHYDRGKQIHH-LDD---ADFLADLVD-LGGTPP 141 (244)
T ss_pred -cCCCCeeecccchhHHHHHHHHHHHHHcCC---CcceEEEecCCCCCCcccCCccC-CCH---HHHHHHHHH-hCCCCh
Confidence 222579999999999999999999987765 355555432 32221111100 000 001101000 000000
Q ss_pred CCCCCC---------------CCCCCCCCCCcccCCCCeEEEEEeCCCccchh--HHHHHHHHHhcCCCcceEEEEeCCC
Q 042745 238 NGCDDP---------------WINPCVEGSSLASMGCARVLVFVAEKDKLAAR--GWLYYEKLKESGWKGRAEIVETKGE 300 (331)
Q Consensus 238 ~~~~~~---------------~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~~~g~ 300 (331)
....++ .+...... .-..+.+ |+.++.|++|..+.. ...+.+..+. ..++++++|
T Consensus 142 e~led~El~~l~LPilRAD~~~~e~Y~~~-~~~pl~~-pi~~~~G~~D~~vs~~~~~~W~~~t~~-----~f~l~~fdG- 213 (244)
T COG3208 142 ELLEDPELMALFLPILRADFRALESYRYP-PPAPLAC-PIHAFGGEKDHEVSRDELGAWREHTKG-----DFTLRVFDG- 213 (244)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhcccccC-CCCCcCc-ceEEeccCcchhccHHHHHHHHHhhcC-----CceEEEecC-
Confidence 000000 00000000 2234566 999999999998852 2223222211 679999998
Q ss_pred ceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 301 SHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 301 ~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+|.|.. +...++.+.|.+.+.
T Consensus 214 gHFfl~-----~~~~~v~~~i~~~l~ 234 (244)
T COG3208 214 GHFFLN-----QQREEVLARLEQHLA 234 (244)
T ss_pred cceehh-----hhHHHHHHHHHHHhh
Confidence 797662 344667777776664
No 122
>COG0627 Predicted esterase [General function prediction only]
Probab=99.11 E-value=4.6e-10 Score=98.73 Aligned_cols=239 Identities=13% Similarity=0.110 Sum_probs=131.7
Q ss_pred EEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCC-C-C-----------CCCCC
Q 042745 65 ARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYR-R-A-----------PENPV 131 (331)
Q Consensus 65 ~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr-~-~-----------~~~~~ 131 (331)
..+++|.-+.......+.|+++++|| ..++........-+++.+.+.|.+++.+|-. . . ....|
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G---~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSG---LTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCC---CCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 45555555410012467899999998 3333222122344567777889999998533 1 0 00000
Q ss_pred C-ChHHH-----HHHHHHHHHHhccCCCCCcccccc-CCC--CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe
Q 042745 132 P-CAHDD-----SWAAIKWVASHVNGSGPEDWLNRY-ADF--QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV 202 (331)
Q Consensus 132 ~-~~~~d-----~~~~~~~l~~~~~~~~~~~~~~~~-~d~--~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~ 202 (331)
. +..+- ......||.++.. +.|+... .+. ++.+|+||||||+-|+.+|+++++ +++.+..+
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP----~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd------~f~~~sS~ 183 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELP----ALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD------RFKSASSF 183 (316)
T ss_pred ecccccCccccCccchhHHHHhhhh----HHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc------hhceeccc
Confidence 0 00000 0112222222221 0111111 333 389999999999999999999975 79999999
Q ss_pred cccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCC-----------CcccCCCCeEEEEEeCCCc
Q 042745 203 HPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGS-----------SLASMGCARVLVFVAEKDK 271 (331)
Q Consensus 203 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~Pvli~~G~~D~ 271 (331)
||+++......... ......-...+..+++.. ....-....|..... .... ..+++++-+|..|.
T Consensus 184 Sg~~~~s~~~~~~~--~~~~~~g~~~~~~~~G~~-~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~ 259 (316)
T COG0627 184 SGILSPSSPWGPTL--AMGDPWGGKAFNAMLGPD-SDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADF 259 (316)
T ss_pred cccccccccccccc--cccccccCccHHHhcCCC-ccccccccCchhHHHHhhhcccccceeccc-CCCccccccccchh
Confidence 99998764332220 000000001111122221 110111111111000 0110 22388999999997
Q ss_pred cch----hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 272 LAA----RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 272 ~v~----~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
+.. ..+.+.+++.+.|+ +..++..++..|.|.++ ...++.++.|+...+
T Consensus 260 ~~~~~~~~~~~~~~a~~~~g~--~~~~~~~~~G~Hsw~~w-------~~~l~~~~~~~a~~l 312 (316)
T COG0627 260 FLAANNLSTRAFAEALRAAGI--PNGVRDQPGGDHSWYFW-------ASQLADHLPWLAGAL 312 (316)
T ss_pred hhhhcccCHHHHHHHHHhcCC--CceeeeCCCCCcCHHHH-------HHHHHHHHHHHHHHh
Confidence 764 36889999999998 88888888999998755 567888888887654
No 123
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.10 E-value=3.6e-09 Score=93.01 Aligned_cols=205 Identities=16% Similarity=0.083 Sum_probs=111.6
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCCCCCCCChH---HHHHHHHHHHHHhccCCCCCccccccCC-CCeEEEeeCCchHHHH
Q 042745 104 HSYLNALVSACNVVAVSVDYRRAPENPVPCAH---DDSWAAIKWVASHVNGSGPEDWLNRYAD-FQRVFFAGDSAGANIA 179 (331)
Q Consensus 104 ~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~---~d~~~~~~~l~~~~~~~~~~~~~~~~~d-~~~i~l~G~S~GG~~A 179 (331)
..++..++.+ ||+|+++||.+-+. +|.... ..+.++++..++.....| +. ..+|+++|+|.||+-+
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~~g--------l~~~~~v~l~GySqGG~Aa 85 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPKLG--------LSPSSRVALWGYSQGGQAA 85 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccccC--------CCCCCCEEEEeeCccHHHH
Confidence 4566777655 99999999986654 553333 344444444444332222 32 3689999999999999
Q ss_pred HHHHHhhcccccCCCc--eeEEEEecccccCCCCCCCCc--------------------cCc-----h----hhhHHHHH
Q 042745 180 HHMGIRNGREILDGFN--VAGIVLVHPYFWGSTPVGNET--------------------TDA-----K----HRAFFDGI 228 (331)
Q Consensus 180 l~~a~~~~~~~~~~~~--i~~~i~~~p~~~~~~~~~~~~--------------------~~~-----~----~~~~~~~~ 228 (331)
+..+...+.. .+... +.|+++..|..+......... ... . ....+...
T Consensus 86 ~~AA~l~~~Y-ApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~ 164 (290)
T PF03583_consen 86 LWAAELAPSY-APELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDA 164 (290)
T ss_pred HHHHHHhHHh-CcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHH
Confidence 8766443321 12335 888888777654322111000 000 0 00011110
Q ss_pred HHhhc-------cCCCC--C--CC-CCCCCCCCC--------CCCc----ccCCCCeEEEEEeCCCccch--hHHHHHHH
Q 042745 229 WRMGY-------RSETN--G--CD-DPWINPCVE--------GSSL----ASMGCARVLVFVAEKDKLAA--RGWLYYEK 282 (331)
Q Consensus 229 ~~~~~-------~~~~~--~--~~-~~~~~~~~~--------~~~l----~~~~~~Pvli~~G~~D~~v~--~~~~~~~~ 282 (331)
..... ..... . .. .+....+.. ...+ ...+..|++|.||..|.++| ....++++
T Consensus 165 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~ 244 (290)
T PF03583_consen 165 RTRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAK 244 (290)
T ss_pred HhhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHH
Confidence 00000 00000 0 00 000000000 0012 11222399999999999987 67889999
Q ss_pred HHhcC-CCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 283 LKESG-WKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 283 l~~~g-~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
+.+.| . +++++.+++.+|.-.. .......++||++.+
T Consensus 245 ~c~~G~a--~V~~~~~~~~~H~~~~--------~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 245 WCAAGGA--DVEYVRYPGGGHLGAA--------FASAPDALAWLDDRF 282 (290)
T ss_pred HHHcCCC--CEEEEecCCCChhhhh--------hcCcHHHHHHHHHHH
Confidence 99998 7 8999999999996432 223455666776554
No 124
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.09 E-value=4.8e-10 Score=98.43 Aligned_cols=127 Identities=20% Similarity=0.164 Sum_probs=85.9
Q ss_pred cceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC
Q 042745 47 SKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA 126 (331)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~ 126 (331)
...+++... ..+..+++++|.|............|+|++-||.|-. ... + .++.+..++.||+|..++..++
T Consensus 38 ~~~i~~~~~--~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~---~~~--f-~~~A~~lAs~Gf~Va~~~hpgs 109 (365)
T COG4188 38 FVTITLNDP--QRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY---VTG--F-AWLAEHLASYGFVVAAPDHPGS 109 (365)
T ss_pred EEEEeccCc--ccCCccccceeccCCCccccccCcCCeEEecCCCCCC---ccc--h-hhhHHHHhhCceEEEeccCCCc
Confidence 677777763 3367899999999887211112489999999995532 222 3 3444444577999999998864
Q ss_pred CCC---------------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHh
Q 042745 127 PEN---------------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 127 ~~~---------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~ 185 (331)
... .+-....|+...+++|.+. .+- +=+...+|+.||+++|||.||+.++.++.-
T Consensus 110 ~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~-~~s---P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 110 NAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL-TAS---PALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh-hcC---cccccccCccceEEEecccccHHHHHhccc
Confidence 211 1123456888888888877 110 101124899999999999999999987643
No 125
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.08 E-value=3.9e-09 Score=90.14 Aligned_cols=213 Identities=18% Similarity=0.199 Sum_probs=134.8
Q ss_pred CCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhc---CCeEE
Q 042745 42 KTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSA---CNVVA 118 (331)
Q Consensus 42 ~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~---~G~~v 118 (331)
.+....+++.+.+. . ..+...-+|+|.+. ....++|+++++||=-|....+ ....+..++++ ...++
T Consensus 64 ~~~~~~~~~~~~~~--l-~~~~~~vv~lppgy---~~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~ 133 (299)
T COG2382 64 TPGGPVEEILYSSE--L-LSERRRVVYLPPGY---NPLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAIL 133 (299)
T ss_pred ccCCchhhhhhhhh--h-ccceeEEEEeCCCC---CccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceE
Confidence 35555677777752 2 36678889999997 5678999999999966654443 23555555554 24788
Q ss_pred EEecCCCCC-----CCCCCChHHHH-HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC
Q 042745 119 VSVDYRRAP-----ENPVPCAHDDS-WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD 192 (331)
Q Consensus 119 v~~dyr~~~-----~~~~~~~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~ 192 (331)
|.+||--.. -+......+.+ ...+-++.+..... -+.++=+|+|.|+||.+++..+.++++
T Consensus 134 vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~---------~~a~~r~L~G~SlGG~vsL~agl~~Pe---- 200 (299)
T COG2382 134 VGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTS---------ADADGRVLAGDSLGGLVSLYAGLRHPE---- 200 (299)
T ss_pred EecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccc---------ccCCCcEEeccccccHHHHHHHhcCch----
Confidence 888875321 11122222322 24555665554322 355778899999999999999999986
Q ss_pred CCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCcc
Q 042745 193 GFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKL 272 (331)
Q Consensus 193 ~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~ 272 (331)
.|-.|++.||.++......... ......+........... =++...++.+.+
T Consensus 201 --~FG~V~s~Sps~~~~~~~~~~~----------------------~~~~~~l~~~~a~~~~~~----~~l~~g~~~~~~ 252 (299)
T COG2382 201 --RFGHVLSQSGSFWWTPLDTQPQ----------------------GEVAESLKILHAIGTDER----IVLTTGGEEGDF 252 (299)
T ss_pred --hhceeeccCCccccCccccccc----------------------cchhhhhhhhhccCccce----EEeecCCccccc
Confidence 7999999999887543221100 000000110110001110 144444455567
Q ss_pred chhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecC
Q 042745 273 AARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFN 308 (331)
Q Consensus 273 v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~ 308 (331)
....+++++.|+..++ ++.+.+|+| +|.+..+.
T Consensus 253 ~~pNr~L~~~L~~~g~--~~~yre~~G-gHdw~~Wr 285 (299)
T COG2382 253 LRPNRALAAQLEKKGI--PYYYREYPG-GHDWAWWR 285 (299)
T ss_pred cchhHHHHHHHHhcCC--cceeeecCC-CCchhHhH
Confidence 7789999999999999 999999999 99877553
No 126
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.07 E-value=5.9e-09 Score=96.96 Aligned_cols=135 Identities=19% Similarity=0.183 Sum_probs=98.4
Q ss_pred cccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHH---HHHhcCCeEEEEe
Q 042745 45 VDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLN---ALVSACNVVAVSV 121 (331)
Q Consensus 45 v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~---~la~~~G~~vv~~ 121 (331)
+..+++.++- +||.++.++||.|++. ++.|+++..+=..+...+........... .++ ..||+||..
T Consensus 17 ~~~~~v~V~M---RDGvrL~~dIy~Pa~~------g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~a-a~GYavV~q 86 (563)
T COG2936 17 YIERDVMVPM---RDGVRLAADIYRPAGA------GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFA-AQGYAVVNQ 86 (563)
T ss_pred eeeeeeeEEe---cCCeEEEEEEEccCCC------CCCceeEEeeccccccccccCcchhhcccccceee-cCceEEEEe
Confidence 6678899987 8999999999999987 78999999992222222100000111122 344 459999999
Q ss_pred cCCCCCCC-----CCC-ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCc
Q 042745 122 DYRRAPEN-----PVP-CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFN 195 (331)
Q Consensus 122 dyr~~~~~-----~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~ 195 (331)
|-|+.... .+. ...+|..+.|+||.++ +| .| .+|+.+|.|++|+..+++|+..+ +.
T Consensus 87 DvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~Q-------pW----sN-G~Vgm~G~SY~g~tq~~~Aa~~p------Pa 148 (563)
T COG2936 87 DVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQ-------PW----SN-GNVGMLGLSYLGFTQLAAAALQP------PA 148 (563)
T ss_pred cccccccCCcccceeccccccchhHHHHHHHhC-------Cc----cC-CeeeeecccHHHHHHHHHHhcCC------ch
Confidence 99987542 122 4789999999999985 34 44 68999999999999999887764 37
Q ss_pred eeEEEEeccccc
Q 042745 196 VAGIVLVHPYFW 207 (331)
Q Consensus 196 i~~~i~~~p~~~ 207 (331)
+++++..++..+
T Consensus 149 Lkai~p~~~~~D 160 (563)
T COG2936 149 LKAIAPTEGLVD 160 (563)
T ss_pred heeecccccccc
Confidence 888888777655
No 127
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.05 E-value=7.2e-09 Score=83.64 Aligned_cols=151 Identities=18% Similarity=0.230 Sum_probs=84.7
Q ss_pred EEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCC
Q 042745 85 LVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADF 164 (331)
Q Consensus 85 vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 164 (331)
|+++||-+ ++... .|..++++-.... +.|-.++. ..| ++..-+..|.+.... . .
T Consensus 1 v~IvhG~~---~s~~~-HW~~wl~~~l~~~-~~V~~~~~------~~P----~~~~W~~~l~~~i~~----------~-~ 54 (171)
T PF06821_consen 1 VLIVHGYG---GSPPD-HWQPWLERQLENS-VRVEQPDW------DNP----DLDEWVQALDQAIDA----------I-D 54 (171)
T ss_dssp EEEE--TT---SSTTT-STHHHHHHHHTTS-EEEEEC--------TS------HHHHHHHHHHCCHC------------T
T ss_pred CEEeCCCC---CCCcc-HHHHHHHHhCCCC-eEEecccc------CCC----CHHHHHHHHHHHHhh----------c-C
Confidence 68999844 33221 2556666555454 77766664 111 334455555555431 2 3
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCC
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPW 244 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
++++|+|||.|+.+++.++.... ..+|+|++|++|+....... .......
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~-----~~~v~g~lLVAp~~~~~~~~-------------------------~~~~~~~ 104 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQS-----QKKVAGALLVAPFDPDDPEP-------------------------FPPELDG 104 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTC-----CSSEEEEEEES--SCGCHHC-------------------------CTCGGCC
T ss_pred CCeEEEEeCHHHHHHHHHHhhcc-----cccccEEEEEcCCCcccccc-------------------------hhhhccc
Confidence 56999999999999999985222 12899999999986420000 0000000
Q ss_pred CCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCcee
Q 042745 245 INPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHV 303 (331)
Q Consensus 245 ~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~ 303 (331)
..+. ....+++ |.+++.+++|+.++ .++.++++| .++++.+++++|.
T Consensus 105 f~~~----p~~~l~~-~~~viaS~nDp~vp~~~a~~~A~~l-------~a~~~~~~~~GHf 153 (171)
T PF06821_consen 105 FTPL----PRDPLPF-PSIVIASDNDPYVPFERAQRLAQRL-------GAELIILGGGGHF 153 (171)
T ss_dssp CTTS----HCCHHHC-CEEEEEETTBSSS-HHHHHHHHHHH-------T-EEEEETS-TTS
T ss_pred cccC----cccccCC-CeEEEEcCCCCccCHHHHHHHHHHc-------CCCeEECCCCCCc
Confidence 1111 2223444 78999999999997 566677766 4579999999994
No 128
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.00 E-value=5.2e-09 Score=95.95 Aligned_cols=106 Identities=20% Similarity=0.261 Sum_probs=72.2
Q ss_pred CCccEEEEEcCCcccccCCCCchhHH-HHHHHHhc-CCeEEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHhcc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHS-YLNALVSA-CNVVAVSVDYRRAPENPVPCA-------HDDSWAAIKWVASHVN 150 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~-~~~~la~~-~G~~vv~~dyr~~~~~~~~~~-------~~d~~~~~~~l~~~~~ 150 (331)
..+|++|++||.+.. +... .+.. ++..+..+ ..+.|+++|+++.+...++.. ..++...+++|.....
T Consensus 39 ~~~ptvIlIHG~~~s-~~~~--~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 39 HETKTFIVIHGWTVT-GMFE--SWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCCeEEEECCCCcC-Ccch--hhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhC
Confidence 467999999984421 2111 1232 34444433 269999999998765544432 2345566666655431
Q ss_pred CCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 151 GSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 151 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
++.+++.|+||||||++|..++.+.+. ++..++++.|.
T Consensus 116 -----------l~l~~VhLIGHSLGAhIAg~ag~~~p~------rV~rItgLDPA 153 (442)
T TIGR03230 116 -----------YPWDNVHLLGYSLGAHVAGIAGSLTKH------KVNRITGLDPA 153 (442)
T ss_pred -----------CCCCcEEEEEECHHHHHHHHHHHhCCc------ceeEEEEEcCC
Confidence 677999999999999999999887653 68999998875
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.98 E-value=1.3e-07 Score=80.50 Aligned_cols=100 Identities=19% Similarity=0.247 Sum_probs=62.8
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCC-eEEEEecCCCCCCCC--CCChHHHHHHHHHHHHHhccCCCCCccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACN-VVAVSVDYRRAPENP--VPCAHDDSWAAIKWVASHVNGSGPEDWL 158 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G-~~vv~~dyr~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 158 (331)
.|.|+++||++..... +......+..... |.++.+|.|+++... .. ........+..+.+.
T Consensus 21 ~~~i~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~---------- 84 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-----WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY-SLSAYADDLAALLDA---------- 84 (282)
T ss_pred CCeEEEeCCCCCchhh-----hHHHHHHhhccccceEEEEecccCCCCCCcccc-cHHHHHHHHHHHHHH----------
Confidence 4599999996533222 2221122222211 899999999877654 11 111112333333333
Q ss_pred cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 159 NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 159 ~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
....++.++|||+||.+++.++.+.++ .+++++++++..
T Consensus 85 ---~~~~~~~l~G~S~Gg~~~~~~~~~~p~------~~~~~v~~~~~~ 123 (282)
T COG0596 85 ---LGLEKVVLVGHSMGGAVALALALRHPD------RVRGLVLIGPAP 123 (282)
T ss_pred ---hCCCceEEEEecccHHHHHHHHHhcch------hhheeeEecCCC
Confidence 333459999999999999999999876 688999888654
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.96 E-value=5.3e-09 Score=83.92 Aligned_cols=185 Identities=22% Similarity=0.270 Sum_probs=111.4
Q ss_pred EEEEEcC-CcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC--CCCCCCChHHHHHHHHHHHHHhccCCCCCccccc
Q 042745 84 LLVYIHG-GGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA--PENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 84 ~vv~~HG-gg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 160 (331)
++||+-| |||.. - .......|+ +.|+.|+.+|-... .+.+-.....|+...++...+.
T Consensus 4 ~~v~~SGDgGw~~-~-----d~~~a~~l~-~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~------------ 64 (192)
T PF06057_consen 4 LAVFFSGDGGWRD-L-----DKQIAEALA-KQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRAR------------ 64 (192)
T ss_pred EEEEEeCCCCchh-h-----hHHHHHHHH-HCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHH------------
Confidence 5666766 66642 1 245566665 55999999994321 1122234457888888887776
Q ss_pred cCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCC
Q 042745 161 YADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGC 240 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
-..+++.|+|+|+|+-+.-.+.-+.+....+ +|+.+++++|.-...-.... .-| .... .
T Consensus 65 -w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~--~v~~v~Ll~p~~~~dFeihv------------~~w---lg~~---~ 123 (192)
T PF06057_consen 65 -WGRKRVVLIGYSFGADVLPFIYNRLPAALRA--RVAQVVLLSPSTTADFEIHV------------SGW---LGMG---G 123 (192)
T ss_pred -hCCceEEEEeecCCchhHHHHHhhCCHHHHh--heeEEEEeccCCcceEEEEh------------hhh---cCCC---C
Confidence 4568999999999998888777776654333 79999999876532211000 001 1111 0
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHH
Q 042745 241 DDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQ 320 (331)
Q Consensus 241 ~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 320 (331)
... ..+..+ .+.+++..|++.++|++|.-. .+..+... +++.+..||..| |. .....+.+.
T Consensus 124 ~~~-~~~~~p--ei~~l~~~~v~CiyG~~E~d~-----~cp~l~~~----~~~~i~lpGgHH-fd------~dy~~La~~ 184 (192)
T PF06057_consen 124 DDA-AYPVIP--EIAKLPPAPVQCIYGEDEDDS-----LCPSLRQP----GVEVIALPGGHH-FD------GDYDALAKR 184 (192)
T ss_pred Ccc-cCCchH--HHHhCCCCeEEEEEcCCCCCC-----cCccccCC----CcEEEEcCCCcC-CC------CCHHHHHHH
Confidence 011 011111 555666559999999888532 22344454 578999999766 44 233566666
Q ss_pred HHHHhhc
Q 042745 321 IASFFNL 327 (331)
Q Consensus 321 i~~fl~~ 327 (331)
|++-|++
T Consensus 185 Il~~l~~ 191 (192)
T PF06057_consen 185 ILDALKA 191 (192)
T ss_pred HHHHHhc
Confidence 7666553
No 131
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.95 E-value=3.2e-09 Score=89.78 Aligned_cols=71 Identities=20% Similarity=0.262 Sum_probs=58.6
Q ss_pred eEEEEecCCCCCCCCC------C-ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 116 VVAVSVDYRRAPENPV------P-CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 116 ~~vv~~dyr~~~~~~~------~-~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
|.|+++|.|+.+...- + ...+|+...++.+++. ...+++.++||||||.+++.++.++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~-------------l~~~~~~~vG~S~Gg~~~~~~a~~~p~ 67 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA-------------LGIKKINLVGHSMGGMLALEYAAQYPE 67 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH-------------HTTSSEEEEEETHHHHHHHHHHHHSGG
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH-------------hCCCCeEEEEECCChHHHHHHHHHCch
Confidence 6799999998876551 1 3467888888888886 344669999999999999999999986
Q ss_pred cccCCCceeEEEEeccc
Q 042745 189 EILDGFNVAGIVLVHPY 205 (331)
Q Consensus 189 ~~~~~~~i~~~i~~~p~ 205 (331)
.++++++.++.
T Consensus 68 ------~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ------RVKKLVLISPP 78 (230)
T ss_dssp ------GEEEEEEESES
T ss_pred ------hhcCcEEEeee
Confidence 79999999885
No 132
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.88 E-value=4.4e-07 Score=85.07 Aligned_cols=131 Identities=11% Similarity=0.115 Sum_probs=85.6
Q ss_pred ccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCC---cccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 46 DSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGG---GFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 46 ~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGg---g~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
...+|.+. ...+.+.-|.|... ......||+++.- .|+..-.. ..++++.+. +.|+.|+.+|
T Consensus 190 TPg~VV~~------n~l~eLiqY~P~te-----~v~~~PLLIVPp~INK~YIlDL~P---~~SlVr~lv-~qG~~VflIs 254 (560)
T TIGR01839 190 TEGAVVFR------NEVLELIQYKPITE-----QQHARPLLVVPPQINKFYIFDLSP---EKSFVQYCL-KNQLQVFIIS 254 (560)
T ss_pred CCCceeEE------CCceEEEEeCCCCC-----CcCCCcEEEechhhhhhheeecCC---cchHHHHHH-HcCCeEEEEe
Confidence 34567776 45677777877664 2344556667751 12221111 246666665 5599999999
Q ss_pred CCCCCCC----CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHH----HHHhhcccccCCC
Q 042745 123 YRRAPEN----PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHH----MGIRNGREILDGF 194 (331)
Q Consensus 123 yr~~~~~----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~----~a~~~~~~~~~~~ 194 (331)
.+..... .+.+.++.+..+++.++.. ...++|.++|+|+||.+++. ++++.++ .
T Consensus 255 W~nP~~~~r~~~ldDYv~~i~~Ald~V~~~-------------tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~-----~ 316 (560)
T TIGR01839 255 WRNPDKAHREWGLSTYVDALKEAVDAVRAI-------------TGSRDLNLLGACAGGLTCAALVGHLQALGQL-----R 316 (560)
T ss_pred CCCCChhhcCCCHHHHHHHHHHHHHHHHHh-------------cCCCCeeEEEECcchHHHHHHHHHHHhcCCC-----C
Confidence 9975332 3344556677788888776 45688999999999999997 4444432 1
Q ss_pred ceeEEEEecccccCC
Q 042745 195 NVAGIVLVHPYFWGS 209 (331)
Q Consensus 195 ~i~~~i~~~p~~~~~ 209 (331)
+|+.++++...+|..
T Consensus 317 ~V~sltllatplDf~ 331 (560)
T TIGR01839 317 KVNSLTYLVSLLDST 331 (560)
T ss_pred ceeeEEeeecccccC
Confidence 688888887776654
No 133
>PRK04940 hypothetical protein; Provisional
Probab=98.82 E-value=2e-07 Score=74.68 Aligned_cols=119 Identities=21% Similarity=0.252 Sum_probs=70.7
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCC
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPW 244 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
+++.|+|.|+||+.|..++.++. +++ |+++|.+.+.... ..+.+.. .. ...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--------~~a-VLiNPAv~P~~~L-----------------~~~ig~~-~~--y~~ 110 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--------IRQ-VIFNPNLFPEENM-----------------EGKIDRP-EE--YAD 110 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--------CCE-EEECCCCChHHHH-----------------HHHhCCC-cc--hhh
Confidence 46999999999999999999983 544 4678877543211 0011100 00 001
Q ss_pred CCCCCCCCCcccCCCC-eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHH
Q 042745 245 INPCVEGSSLASMGCA-RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIAS 323 (331)
Q Consensus 245 ~~~~~~~~~l~~~~~~-Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~ 323 (331)
+.+..-. .++ +..| -.+++..+.|.+.+. ++..+++.. -.+..+.+|++|.|..+ ++.+..|++
T Consensus 111 ~~~~h~~-eL~-~~~p~r~~vllq~gDEvLDy-r~a~~~y~~-----~y~~~v~~GGdH~f~~f-------e~~l~~I~~ 175 (180)
T PRK04940 111 IATKCVT-NFR-EKNRDRCLVILSRNDEVLDS-QRTAEELHP-----YYEIVWDEEQTHKFKNI-------SPHLQRIKA 175 (180)
T ss_pred hhHHHHH-Hhh-hcCcccEEEEEeCCCcccCH-HHHHHHhcc-----CceEEEECCCCCCCCCH-------HHHHHHHHH
Confidence 1000000 111 1111 479999999988862 222233322 23688999999998743 678999999
Q ss_pred Hhhc
Q 042745 324 FFNL 327 (331)
Q Consensus 324 fl~~ 327 (331)
|+++
T Consensus 176 F~~~ 179 (180)
T PRK04940 176 FKTL 179 (180)
T ss_pred HHhc
Confidence 9854
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.76 E-value=1.8e-08 Score=84.65 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccccc--CCCceeEEEEecccccCCCCC
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREIL--DGFNVAGIVLVHPYFWGSTPV 212 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~--~~~~i~~~i~~~p~~~~~~~~ 212 (331)
..++..++++|.+...+.| --.+|+|+|.||.+|+.++........ ..+.++.+|+++++.-....
T Consensus 83 ~~~~~~sl~~l~~~i~~~G-----------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG-----------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH--------------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--
T ss_pred ccCHHHHHHHHHHHHHhcC-----------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-
Confidence 5667788888877755333 257899999999999988865432111 13478999999887732111
Q ss_pred CCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCc
Q 042745 213 GNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKG 290 (331)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~ 290 (331)
..... .-..+.+ |+|-++|++|.+++ .++.+++.....
T Consensus 151 --------------------------------~~~~~---~~~~i~i-PtlHv~G~~D~~~~~~~s~~L~~~~~~~---- 190 (212)
T PF03959_consen 151 --------------------------------YQELY---DEPKISI-PTLHVIGENDPVVPPERSEALAEMFDPD---- 190 (212)
T ss_dssp --------------------------------GTTTT-----TT----EEEEEEETT-SSS-HHHHHHHHHHHHHH----
T ss_pred --------------------------------hhhhh---ccccCCC-CeEEEEeCCCCCcchHHHHHHHHhccCC----
Confidence 00000 0112334 99999999999998 777788777663
Q ss_pred ceEEEEeCCCceeee
Q 042745 291 RAEIVETKGESHVFH 305 (331)
Q Consensus 291 ~~~~~~~~g~~H~~~ 305 (331)
.+++..++ +|.+.
T Consensus 191 -~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 191 -ARVIEHDG-GHHVP 203 (212)
T ss_dssp -EEEEEESS-SSS--
T ss_pred -cEEEEECC-CCcCc
Confidence 36666676 67554
No 135
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.74 E-value=4.7e-07 Score=76.89 Aligned_cols=127 Identities=15% Similarity=0.267 Sum_probs=86.1
Q ss_pred ceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC
Q 042745 48 KDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP 127 (331)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~ 127 (331)
+.+.+.+ .++..+.++-.+-... +.+++..+||=+||. -|++.+ ..+++..+.+.|+.++.++|++.+
T Consensus 7 ~~~k~~~---~~~~~~~~~a~y~D~~---~~gs~~gTVv~~hGs---PGSH~D---FkYi~~~l~~~~iR~I~iN~PGf~ 74 (297)
T PF06342_consen 7 KLVKFQA---ENGKIVTVQAVYEDSL---PSGSPLGTVVAFHGS---PGSHND---FKYIRPPLDEAGIRFIGINYPGFG 74 (297)
T ss_pred EEEEccc---ccCceEEEEEEEEecC---CCCCCceeEEEecCC---CCCccc---hhhhhhHHHHcCeEEEEeCCCCCC
Confidence 4444444 3455566664333332 245677899999994 466655 467777778899999999999875
Q ss_pred CCCCCC----hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec
Q 042745 128 ENPVPC----AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH 203 (331)
Q Consensus 128 ~~~~~~----~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~ 203 (331)
..+.+. .-++-...+..|.+... ++ +++.++|||.|+-.|+.++...+ ..|+++++
T Consensus 75 ~t~~~~~~~~~n~er~~~~~~ll~~l~-----------i~-~~~i~~gHSrGcenal~la~~~~--------~~g~~lin 134 (297)
T PF06342_consen 75 FTPGYPDQQYTNEERQNFVNALLDELG-----------IK-GKLIFLGHSRGCENALQLAVTHP--------LHGLVLIN 134 (297)
T ss_pred CCCCCcccccChHHHHHHHHHHHHHcC-----------CC-CceEEEEeccchHHHHHHHhcCc--------cceEEEec
Confidence 433222 22344445555555432 55 78999999999999999999873 56888888
Q ss_pred ccc
Q 042745 204 PYF 206 (331)
Q Consensus 204 p~~ 206 (331)
|.-
T Consensus 135 ~~G 137 (297)
T PF06342_consen 135 PPG 137 (297)
T ss_pred CCc
Confidence 754
No 136
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.71 E-value=6.2e-07 Score=76.82 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccc-ccCCCceeEEEEecccccCCCCC
Q 042745 134 AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGRE-ILDGFNVAGIVLVHPYFWGSTPV 212 (331)
Q Consensus 134 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~-~~~~~~i~~~i~~~p~~~~~~~~ 212 (331)
+..-+..++.+|.+. +..+++-++||||||..++.++..+... .+| .+..+|++.+.++.....
T Consensus 85 qa~wl~~vl~~L~~~-------------Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P--~l~K~V~Ia~pfng~~~~ 149 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKK-------------YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLP--KLNKLVTIAGPFNGILGM 149 (255)
T ss_dssp HHHHHHHHHHHHHHC-------------C--SEEEEEEETHHHHHHHHHHHHCTTGTTS---EEEEEEEES--TTTTTCC
T ss_pred HHHHHHHHHHHHHHh-------------cCCCEEeEEEECccHHHHHHHHHHhccCCCCc--ccceEEEeccccCccccc
Confidence 456667788888776 6679999999999999999998887543 343 789999997766554322
Q ss_pred CCCccC-------c-hhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeC------CCccch--hH
Q 042745 213 GNETTD-------A-KHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAE------KDKLAA--RG 276 (331)
Q Consensus 213 ~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~------~D~~v~--~~ 276 (331)
...... + ...+....+.... . . .+.+- . .+|-|.|. .|-.|+ .+
T Consensus 150 ~~~~~~~~~~~~gp~~~~~~y~~l~~~~---~------~---------~~p~~-i-~VLnI~G~~~~g~~sDG~V~~~Ss 209 (255)
T PF06028_consen 150 NDDQNQNDLNKNGPKSMTPMYQDLLKNR---R------K---------NFPKN-I-QVLNIYGDLEDGSNSDGIVPNASS 209 (255)
T ss_dssp SC-TTTT-CSTT-BSS--HHHHHHHHTH---G------G---------GSTTT---EEEEEEEESBTTCSBTSSSBHHHH
T ss_pred cccchhhhhcccCCcccCHHHHHHHHHH---H------h---------hCCCC-e-EEEEEecccCCCCCCCeEEeHHHH
Confidence 111000 0 0111111221110 0 0 11111 1 79999998 677777 44
Q ss_pred HHHHHHHHhcCCCcceEEEEeCC--CceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 277 WLYYEKLKESGWKGRAEIVETKG--ESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 277 ~~~~~~l~~~g~~~~~~~~~~~g--~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+.+.-.++.... .++-.++.| +.|.-. .+..++.+.|.+||=
T Consensus 210 ~sl~~L~~~~~~--~Y~e~~v~G~~a~HS~L------heN~~V~~~I~~FLw 253 (255)
T PF06028_consen 210 LSLRYLLKNRAK--SYQEKTVTGKDAQHSQL------HENPQVDKLIIQFLW 253 (255)
T ss_dssp CTHHHHCTTTSS--EEEEEEEESGGGSCCGG------GCCHHHHHHHHHHHC
T ss_pred HHHHHHhhcccC--ceEEEEEECCCCccccC------CCCHHHHHHHHHHhc
Confidence 445555555544 677777765 578532 344788899999984
No 137
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.70 E-value=2.1e-07 Score=76.95 Aligned_cols=200 Identities=15% Similarity=0.169 Sum_probs=97.6
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC--------CCCCC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA--------PENPV 131 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~--------~~~~~ 131 (331)
+..|.++-..|+.. .+.+.++||+.-|-|-.+. .+...+..+ ..+||.|+.+|--.+ .+.++
T Consensus 12 ~~~I~vwet~P~~~----~~~~~~tiliA~Gf~rrmd-----h~agLA~YL-~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 12 GRQIRVWETRPKNN----EPKRNNTILIAPGFARRMD-----HFAGLAEYL-SANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp TEEEEEEEE---TT----S---S-EEEEE-TT-GGGG-----GGHHHHHHH-HTTT--EEEE---B-------------H
T ss_pred CCEEEEeccCCCCC----CcccCCeEEEecchhHHHH-----HHHHHHHHH-hhCCeEEEeccccccccCCCCChhhcch
Confidence 55677776677765 4577799999998443222 245555555 467999999995532 11233
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCC
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTP 211 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~ 211 (331)
...-.|+..+++||.+. ...+++|+..|.-|.+|+..+.+. .+..+|+..++.+....
T Consensus 82 s~g~~sL~~V~dwl~~~--------------g~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr~T 139 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR--------------GIRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLRDT 139 (294)
T ss_dssp HHHHHHHHHHHHHHHHT--------------T---EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HHHH
T ss_pred HHhHHHHHHHHHHHHhc--------------CCCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHHHH
Confidence 34567999999999964 457899999999999999999855 35556655555432111
Q ss_pred C---------CC---C---ccCch-----hhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCc
Q 042745 212 V---------GN---E---TTDAK-----HRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDK 271 (331)
Q Consensus 212 ~---------~~---~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~ 271 (331)
. .. . ..+.. ...+.....+.- .+..-+... +++.+.+ |++.+++++|.
T Consensus 140 Le~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~--------w~~l~ST~~---~~k~l~i-P~iaF~A~~D~ 207 (294)
T PF02273_consen 140 LEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHG--------WDDLDSTIN---DMKRLSI-PFIAFTANDDD 207 (294)
T ss_dssp HHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT---------SSHHHHHH---HHTT--S--EEEEEETT-T
T ss_pred HHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcC--------CccchhHHH---HHhhCCC-CEEEEEeCCCc
Confidence 0 00 0 00000 111111221111 111111111 5566777 99999999999
Q ss_pred cchhHHHHHHHHHhcCCCcceEEEEeCCCceeee
Q 042745 272 LAARGWLYYEKLKESGWKGRAEIVETKGESHVFH 305 (331)
Q Consensus 272 ~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~ 305 (331)
.|.+..- .+.+...+ ...++++..+|..|...
T Consensus 208 WV~q~eV-~~~~~~~~-s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 208 WVKQSEV-EELLDNIN-SNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp TS-HHHH-HHHHTT-T-T--EEEEEETT-SS-TT
T ss_pred cccHHHH-HHHHHhcC-CCceeEEEecCccchhh
Confidence 9974432 23333222 22789999999999765
No 138
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.69 E-value=1.1e-07 Score=92.71 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=61.6
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCC----------------------------
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVP---------------------------- 132 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~---------------------------- 132 (331)
.+|+||++|| +.++... |..++..++ +.||.|+++|+++++...+.
T Consensus 448 g~P~VVllHG---~~g~~~~--~~~lA~~La-~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHG---ITGAKEN--ALAFAGTLA-AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCC---CCCCHHH--HHHHHHHHH-hCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 4689999999 3344333 566666665 45999999999988765222
Q ss_pred --ChHHHHHHHHHHHHHhccCCCCCcc-ccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 133 --CAHDDSWAAIKWVASHVNGSGPEDW-LNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 133 --~~~~d~~~~~~~l~~~~~~~~~~~~-~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
..+.|+......+.... +....+ ....++..+|.++||||||.++..++...+
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~--~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSA--LAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHHHHHHHHhccc--ccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 12345554444444110 000000 000256689999999999999999887643
No 139
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.69 E-value=2.7e-07 Score=75.60 Aligned_cols=228 Identities=14% Similarity=0.122 Sum_probs=118.5
Q ss_pred CCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCC------
Q 042745 58 NNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPV------ 131 (331)
Q Consensus 58 ~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~------ 131 (331)
.|+..+.++.|...+. .+--+.+-|+- |-... +..-+..++++.||.|+.+|||+.+...-
T Consensus 13 ~DG~~l~~~~~pA~~~--------~~g~~~va~a~---Gv~~~--fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~ 79 (281)
T COG4757 13 PDGYSLPGQRFPADGK--------ASGRLVVAGAT---GVGQY--FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGS 79 (281)
T ss_pred CCCccCccccccCCCC--------CCCcEEecccC---Ccchh--HhHHHHHHhhccCceEEEEecccccCCCccccccC
Confidence 4577788887754443 23233344422 22211 33334455567799999999998765321
Q ss_pred -----CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEE-Eeccc
Q 042745 132 -----PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIV-LVHPY 205 (331)
Q Consensus 132 -----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i-~~~p~ 205 (331)
.-...|..++++++++.. .......+|||+||++--.+..+.+.... .+-|.. .++++
T Consensus 80 ~~~~~DwA~~D~~aal~~~~~~~-------------~~~P~y~vgHS~GGqa~gL~~~~~k~~a~---~vfG~gagwsg~ 143 (281)
T COG4757 80 QWRYLDWARLDFPAALAALKKAL-------------PGHPLYFVGHSFGGQALGLLGQHPKYAAF---AVFGSGAGWSGW 143 (281)
T ss_pred ccchhhhhhcchHHHHHHHHhhC-------------CCCceEEeeccccceeecccccCccccee---eEeccccccccc
Confidence 113479999999999863 23568899999999987666655422111 111111 12333
Q ss_pred ccCCCCCC----------------CCccCc------hhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEE
Q 042745 206 FWGSTPVG----------------NETTDA------KHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVL 263 (331)
Q Consensus 206 ~~~~~~~~----------------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvl 263 (331)
....+... ...... ....-..+-|..+..-....-.++...-... ..+.+.+ |+.
T Consensus 144 m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q--~yaaVrt-Pi~ 220 (281)
T COG4757 144 MGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQ--VYAAVRT-PIT 220 (281)
T ss_pred hhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHH--HHHHhcC-cee
Confidence 22111100 000000 0011111222222211101111221111000 3445666 999
Q ss_pred EEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCC----CceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 264 VFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKG----ESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 264 i~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g----~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
.+...+|+.+| ..+.|.+...++. .+.+.++. .+|.=...++ .+..+++++.|+
T Consensus 221 ~~~~~DD~w~P~As~d~f~~~y~nAp----l~~~~~~~~~~~lGH~gyfR~~----~Ealwk~~L~w~ 280 (281)
T COG4757 221 FSRALDDPWAPPASRDAFASFYRNAP----LEMRDLPRAEGPLGHMGYFREP----FEALWKEMLGWF 280 (281)
T ss_pred eeccCCCCcCCHHHHHHHHHhhhcCc----ccceecCcccCcccchhhhccc----hHHHHHHHHHhh
Confidence 99999999997 3456777777774 45555554 4785332222 266788888886
No 140
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.67 E-value=5.2e-06 Score=73.14 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=70.3
Q ss_pred ceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-----------C
Q 042745 62 ALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-----------P 130 (331)
Q Consensus 62 ~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-----------~ 130 (331)
.-.+.+..|+.. ....+|++|.+.|.|-..-.+. ..-+...++.+ |+..+...-..++.. .
T Consensus 76 ~a~~~~~~P~~~----~~~~rp~~IhLagTGDh~f~rR---~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~ 147 (348)
T PF09752_consen 76 TARFQLLLPKRW----DSPYRPVCIHLAGTGDHGFWRR---RRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRN 147 (348)
T ss_pred heEEEEEECCcc----ccCCCceEEEecCCCccchhhh---hhhhhhHHHHc-CcceEEEecccccccChhHhhcccccc
Confidence 356677888875 2356999999999553221111 11235677766 998888764433211 0
Q ss_pred C-------CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 131 V-------PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 131 ~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
. ...+.++...+.|+.++. ..+++|.|.||||.+|..++...+.
T Consensus 148 VsDl~~~g~~~i~E~~~Ll~Wl~~~G--------------~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 148 VSDLFVMGRATILESRALLHWLEREG--------------YGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHHhcC--------------CCceEEEEechhHhhHHhhhhcCCC
Confidence 1 123467888889998862 3589999999999999998887764
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.67 E-value=1.3e-06 Score=72.69 Aligned_cols=199 Identities=16% Similarity=0.144 Sum_probs=112.6
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcC----CeEEEEecCCCC----------C------------CCCCCChHHH
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSAC----NVVAVSVDYRRA----------P------------ENPVPCAHDD 137 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~----G~~vv~~dyr~~----------~------------~~~~~~~~~d 137 (331)
..||+||.|....+ ...++.++..+. -..++.+|-.++ . ......+..-
T Consensus 47 PTIfIhGsgG~asS-----~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 47 PTIFIHGSGGTASS-----LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ceEEEecCCCChhH-----HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 36899996644333 456677776552 123344443322 1 1233445566
Q ss_pred HHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc-cccCCCceeEEEEecccccCCCCCCCCc
Q 042745 138 SWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR-EILDGFNVAGIVLVHPYFWGSTPVGNET 216 (331)
Q Consensus 138 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~-~~~~~~~i~~~i~~~p~~~~~~~~~~~~ 216 (331)
+..++.+|..+ ++..++-++||||||.....++..+.. ..+| .++..|++.+-+......+.+.
T Consensus 122 lk~~msyL~~~-------------Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P--~lnK~V~l~gpfN~~~l~~de~ 186 (288)
T COG4814 122 LKKAMSYLQKH-------------YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLP--PLNKLVSLAGPFNVGNLVPDET 186 (288)
T ss_pred HHHHHHHHHHh-------------cCCceeeeeeeccccHHHHHHHHHhcCCCCCc--chhheEEecccccccccCCCcc
Confidence 77889999887 788999999999999999888887754 4454 7888888866555322222222
Q ss_pred cCch---hh-hHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCC------ccch--hHHHHHHHHH
Q 042745 217 TDAK---HR-AFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKD------KLAA--RGWLYYEKLK 284 (331)
Q Consensus 217 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D------~~v~--~~~~~~~~l~ 284 (331)
.... .. .....+..+... ....+++ + . .+|++.|+-| -.|| .+...+..+.
T Consensus 187 v~~v~~~~~~~~~t~y~~y~~~------n~k~v~~-----~-----~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~ 249 (288)
T COG4814 187 VTDVLKDGPGLIKTPYYDYIAK------NYKKVSP-----N-----T-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFK 249 (288)
T ss_pred hheeeccCccccCcHHHHHHHh------cceeCCC-----C-----c-EEEEEecccccCCcCCCceechHhHHHHHHhc
Confidence 1110 00 001111111111 1111222 1 1 7999999876 3344 4455555666
Q ss_pred hcCCCcceEEEEe--CCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 285 ESGWKGRAEIVET--KGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 285 ~~g~~~~~~~~~~--~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
..+. .+.-.+| +.+.|.-. .+...+.+.+..||-+
T Consensus 250 ~~~k--sy~e~~~~Gk~a~Hs~l------hen~~v~~yv~~FLw~ 286 (288)
T COG4814 250 KNGK--SYIESLYKGKDARHSKL------HENPTVAKYVKNFLWE 286 (288)
T ss_pred cCcc--eeEEEeeeCCcchhhcc------CCChhHHHHHHHHhhc
Confidence 6654 4443344 45678533 3446788888888854
No 142
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.60 E-value=8.8e-06 Score=71.00 Aligned_cols=97 Identities=10% Similarity=0.191 Sum_probs=71.8
Q ss_pred CCccEEEEEcCCcccccCCCCc-hhHHHHHHHHhcCCeEEEEecCCCCCCCCC----CChHHHHHHHHHHHHHhccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSP-FYHSYLNALVSACNVVAVSVDYRRAPENPV----PCAHDDSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~-~~~~~~~~la~~~G~~vv~~dyr~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~ 154 (331)
++...||+.-|.|......... .....+..++.+.|.+|+.++||+.+..+. .+.+.|..+.++||++...
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~---- 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ---- 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc----
Confidence 5678999999988766553210 012456778888999999999998755433 3456777888888887532
Q ss_pred CccccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
++.+++|++.|||.||.++..++.+.
T Consensus 211 ------G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 ------GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ------CCChheEEEeeccccHHHHHHHHHhc
Confidence 37889999999999999998765554
No 143
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.59 E-value=2.4e-06 Score=77.61 Aligned_cols=134 Identities=13% Similarity=0.159 Sum_probs=90.2
Q ss_pred CCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcC-----CcccccCCCCchhHHHHHHHHhcCCeE
Q 042745 43 TNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHG-----GGFCIETPFSPFYHSYLNALVSACNVV 117 (331)
Q Consensus 43 ~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HG-----gg~~~g~~~~~~~~~~~~~la~~~G~~ 117 (331)
.+...++..+.+ .||- -+.+..-+.. .+++|+|++.|| ..|+...+ ...+..++++.||-
T Consensus 44 ~gy~~E~h~V~T---~DgY--iL~lhRIp~~-----~~~rp~Vll~HGLl~sS~~Wv~n~p-----~~sLaf~LadaGYD 108 (403)
T KOG2624|consen 44 YGYPVEEHEVTT---EDGY--ILTLHRIPRG-----KKKRPVVLLQHGLLASSSSWVLNGP-----EQSLAFLLADAGYD 108 (403)
T ss_pred cCCceEEEEEEc---cCCe--EEEEeeecCC-----CCCCCcEEEeeccccccccceecCc-----cccHHHHHHHcCCc
Confidence 344567777776 3333 4444433332 168999999999 22332222 13345666788999
Q ss_pred EEEecCCCCC----------C-CC-C------CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHH
Q 042745 118 AVSVDYRRAP----------E-NP-V------PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIA 179 (331)
Q Consensus 118 vv~~dyr~~~----------~-~~-~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~A 179 (331)
|+.-+-|+.. . .. | +-...|+-+.++++... ...+++..+|||.|+...
T Consensus 109 VWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~-------------T~~~kl~yvGHSQGtt~~ 175 (403)
T KOG2624|consen 109 VWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK-------------TGQEKLHYVGHSQGTTTF 175 (403)
T ss_pred eeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh-------------ccccceEEEEEEccchhh
Confidence 9999999631 1 11 1 11457999999999987 556899999999999999
Q ss_pred HHHHHhhcccccCCCceeEEEEeccccc
Q 042745 180 HHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 180 l~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
+.++...++.. .+|+..++++|...
T Consensus 176 fv~lS~~p~~~---~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 176 FVMLSERPEYN---KKIKSFIALAPAAF 200 (403)
T ss_pred eehhcccchhh---hhhheeeeecchhh
Confidence 98887765432 26888999888763
No 144
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.53 E-value=9.1e-06 Score=74.02 Aligned_cols=127 Identities=9% Similarity=-0.040 Sum_probs=73.2
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC---CCChHH
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP---VPCAHD 136 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~---~~~~~~ 136 (331)
.....+.-|.|...+ ...+.|.||++-- ..+.... .....++.+. . |+.|...|+......+ ..-.++
T Consensus 83 ~~~~~L~~y~~~~~~---~~~~~~pvLiV~P---l~g~~~~-L~RS~V~~Ll-~-g~dVYl~DW~~p~~vp~~~~~f~ld 153 (406)
T TIGR01849 83 KPFCRLIHFKRQGFR---AELPGPAVLIVAP---MSGHYAT-LLRSTVEALL-P-DHDVYITDWVNARMVPLSAGKFDLE 153 (406)
T ss_pred CCCeEEEEECCCCcc---cccCCCcEEEEcC---CchHHHH-HHHHHHHHHh-C-CCcEEEEeCCCCCCCchhcCCCCHH
Confidence 345666667665431 1122356666654 2222211 1245556664 5 9999999998765332 223345
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
|... ++.+-... +.++ +-|+|.|+||.+++.+++...+.+- +..++.++++.+.+|...
T Consensus 154 DYi~---~l~~~i~~----------~G~~-v~l~GvCqgG~~~laa~Al~a~~~~-p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 154 DYID---YLIEFIRF----------LGPD-IHVIAVCQPAVPVLAAVALMAENEP-PAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHHH---HHHHHHHH----------hCCC-CcEEEEchhhHHHHHHHHHHHhcCC-CCCcceEEEEecCccCCC
Confidence 5443 33222221 3234 8999999999999987776654332 125899888877666543
No 145
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.52 E-value=3.4e-06 Score=73.32 Aligned_cols=111 Identities=22% Similarity=0.290 Sum_probs=78.1
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhc--CCeEEEEecCCCCCCCCC----------CChHHHHHHHHHHHHHhc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSA--CNVVAVSVDYRRAPENPV----------PCAHDDSWAAIKWVASHV 149 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~--~G~~vv~~dyr~~~~~~~----------~~~~~d~~~~~~~l~~~~ 149 (331)
+++|++|-|..+..+- |..++..+... ..+.|++..+.++..... -.--+++...++++.+..
T Consensus 2 ~~li~~IPGNPGlv~f-----Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-----YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHHH-----HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 5789999996554322 67788877765 379999999887633221 123356667777777765
Q ss_pred cCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 150 NGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 150 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
.... ....+++|+|||.|+++++.++.+.+.. ...|.+++++.|.+..
T Consensus 77 ~~~~--------~~~~~liLiGHSIGayi~levl~r~~~~---~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 77 PQKN--------KPNVKLILIGHSIGAYIALEVLKRLPDL---KFRVKKVILLFPTIED 124 (266)
T ss_pred hhhc--------CCCCcEEEEeCcHHHHHHHHHHHhcccc---CCceeEEEEeCCcccc
Confidence 3210 1457899999999999999999998722 1279999999887643
No 146
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.49 E-value=2.5e-05 Score=66.23 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=38.3
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
+|.++.+|+|||+||.+++......++ .+...+++||-+++.+
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~------~F~~y~~~SPSlWw~n 176 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPD------CFGRYGLISPSLWWHN 176 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcc------hhceeeeecchhhhCC
Confidence 788999999999999999999998866 7999999999887544
No 147
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.47 E-value=4.1e-07 Score=81.23 Aligned_cols=110 Identities=19% Similarity=0.252 Sum_probs=64.5
Q ss_pred CCCccEEEEEcCCcccccCC-CCchhHHHHHHHHhc--CCeEEEEecCCCCCCCCCCChH-------HHHHHHHHHHHHh
Q 042745 79 NNKLPLLVYIHGGGFCIETP-FSPFYHSYLNALVSA--CNVVAVSVDYRRAPENPVPCAH-------DDSWAAIKWVASH 148 (331)
Q Consensus 79 ~~~~p~vv~~HGgg~~~g~~-~~~~~~~~~~~la~~--~G~~vv~~dyr~~~~~~~~~~~-------~d~~~~~~~l~~~ 148 (331)
..++|++|++|| | .++. .......+...+..+ .++.|+++|+.......+.... +.+...+.+|...
T Consensus 68 n~~~pt~iiiHG--w-~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSKPTVIIIHG--W-TGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTSEEEEEE----T-T-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--c-CCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 357999999997 3 3333 332345555666666 5899999999754333333332 2333445555533
Q ss_pred ccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 149 VNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
. ++++++|-|+|||+||++|-.++.+... + .++..+..+-|..
T Consensus 145 ~-----------g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~---~ki~rItgLDPAg 187 (331)
T PF00151_consen 145 F-----------GVPPENIHLIGHSLGAHVAGFAGKYLKG-G---GKIGRITGLDPAG 187 (331)
T ss_dssp H--------------GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-
T ss_pred c-----------CCChhHEEEEeeccchhhhhhhhhhccC-c---ceeeEEEecCccc
Confidence 2 2889999999999999999999988765 1 2577777776544
No 148
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.43 E-value=1.9e-06 Score=72.85 Aligned_cols=107 Identities=16% Similarity=0.150 Sum_probs=65.4
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHH-------hcCCeEEEEecCCCCCC----CCCCChHHHHHHHHHHHHHhc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALV-------SACNVVAVSVDYRRAPE----NPVPCAHDDSWAAIKWVASHV 149 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la-------~~~G~~vv~~dyr~~~~----~~~~~~~~d~~~~~~~l~~~~ 149 (331)
.+..|||+||.+ |+... .+.+...+. ....+.++..||..... .....+.+-+..+++.+.+..
T Consensus 3 ~g~pVlFIhG~~---Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNA---GSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCC---CCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhh
Confidence 456899999943 33321 233332221 11257788888875422 122334455666777776654
Q ss_pred cCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec
Q 042745 150 NGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH 203 (331)
Q Consensus 150 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~ 203 (331)
.... ..+++|.|+||||||.+|..++....... ..++.+|.++
T Consensus 78 ~~~~--------~~~~~vilVgHSmGGlvar~~l~~~~~~~---~~v~~iitl~ 120 (225)
T PF07819_consen 78 KSNR--------PPPRSVILVGHSMGGLVARSALSLPNYDP---DSVKTIITLG 120 (225)
T ss_pred hhcc--------CCCCceEEEEEchhhHHHHHHHhcccccc---ccEEEEEEEc
Confidence 2111 46789999999999999988776554221 2699999875
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.42 E-value=2.7e-05 Score=69.12 Aligned_cols=200 Identities=14% Similarity=0.142 Sum_probs=119.5
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC-----CC------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA-----PE------ 128 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~-----~~------ 128 (331)
++.-..-+|.|... ...+.+||++||-|- +..++.....++.-+.+.|+.+++.....- +.
T Consensus 70 ~~~~flaL~~~~~~-----~~~~G~vIilp~~g~---~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 70 GEERFLALWRPANS-----AKPQGAVIILPDWGE---HPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred CCEEEEEEEecccC-----CCCceEEEEecCCCC---CCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCC
Confidence 56677788999876 467889999999553 232233455666666788999998665430 00
Q ss_pred -------CCC------C----------------ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHH
Q 042745 129 -------NPV------P----------------CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIA 179 (331)
Q Consensus 129 -------~~~------~----------------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~A 179 (331)
... + ....-+.+++.++... ...+|+|+||+.|+.++
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--------------~~~~ivlIg~G~gA~~~ 207 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ--------------GGKNIVLIGHGTGAGWA 207 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc--------------CCceEEEEEeChhHHHH
Confidence 000 0 1112334444554443 23679999999999999
Q ss_pred HHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCC
Q 042745 180 HHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGC 259 (331)
Q Consensus 180 l~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 259 (331)
+.+...... ..+.++|++++....... ...+.. .+..++.
T Consensus 208 ~~~la~~~~-----~~~daLV~I~a~~p~~~~------------------------------n~~l~~-----~la~l~i 247 (310)
T PF12048_consen 208 ARYLAEKPP-----PMPDALVLINAYWPQPDR------------------------------NPALAE-----QLAQLKI 247 (310)
T ss_pred HHHHhcCCC-----cccCeEEEEeCCCCcchh------------------------------hhhHHH-----HhhccCC
Confidence 999887764 268899999877632111 000000 3444544
Q ss_pred CeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 260 ARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
|+|=+++.....+.......+.+.....+..++-+.+.+..|.+. .....+.++|..||+++
T Consensus 248 -PvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 248 -PVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred -CEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChh------hHHHHHHHHHHHHHHhh
Confidence 888888777433332222222222221111466666777777443 23344899999999876
No 150
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.41 E-value=2.3e-06 Score=72.69 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=68.6
Q ss_pred cEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC-CCCCCChHHHHH-HHHHHHHHhccCCCCCccccc
Q 042745 83 PLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP-ENPVPCAHDDSW-AAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~-~~~~~~~~~d~~-~~~~~l~~~~~~~~~~~~~~~ 160 (331)
+.|+++|++|. +.. .|..+++.+..+ .+.|+.+++++.. .......++++. ..++.++..
T Consensus 1 ~~lf~~p~~gG---~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~------------ 62 (229)
T PF00975_consen 1 RPLFCFPPAGG---SAS--SYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR------------ 62 (229)
T ss_dssp -EEEEESSTTC---SGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH------------
T ss_pred CeEEEEcCCcc---CHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh------------
Confidence 46899999774 222 277777777544 5889999988764 222334444443 344555553
Q ss_pred cCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 161 YADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
....++.|+|||+||.+|+.+|.+....+. .+..++++.+.
T Consensus 63 -~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~---~v~~l~liD~~ 103 (229)
T PF00975_consen 63 -QPEGPYVLAGWSFGGILAFEMARQLEEAGE---EVSRLILIDSP 103 (229)
T ss_dssp -TSSSSEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCS
T ss_pred -CCCCCeeehccCccHHHHHHHHHHHHHhhh---ccCceEEecCC
Confidence 222389999999999999999999877643 68899988743
No 151
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.29 E-value=6.5e-05 Score=61.42 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=79.0
Q ss_pred ceEEEEeecCCCC-CCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC----CCCCCCChHH
Q 042745 62 ALSARLYLPKGTN-NNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA----PENPVPCAHD 136 (331)
Q Consensus 62 ~~~~~~~~P~~~~-~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~----~~~~~~~~~~ 136 (331)
+..+..|.|+... ...++-.+-.|||+-|=| .|-... .|...+...+.+.++..+.+..|-+ +.....+..+
T Consensus 15 rgvlF~y~~Ks~~va~~~gv~~~~vvfiGGLg--dgLl~~-~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~e 91 (299)
T KOG4840|consen 15 RGVLFVYDSKSSLVAYSNGVESVKVVFIGGLG--DGLLIC-LYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVE 91 (299)
T ss_pred eeeEEEecCccceeeeccCceEEEEEEEcccC--CCcccc-ccHHHHHHHHhhccceeeeeeccccccccccccccccHH
Confidence 3445555565531 001122335567776522 222222 1334444445677999998886644 3455667788
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCC
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~ 209 (331)
|+..+++++..- -..+.|+|+|||-|.+-.+.+++...-. -.+.+.|+.+|+.+-.
T Consensus 92 dl~~l~~Hi~~~-------------~fSt~vVL~GhSTGcQdi~yYlTnt~~~----r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 92 DLKCLLEHIQLC-------------GFSTDVVLVGHSTGCQDIMYYLTNTTKD----RKIRAAILQAPVSDRE 147 (299)
T ss_pred HHHHHHHHhhcc-------------CcccceEEEecCccchHHHHHHHhccch----HHHHHHHHhCccchhh
Confidence 998898877653 2346899999999999998888443221 1688889999987654
No 152
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.28 E-value=4.1e-05 Score=68.66 Aligned_cols=118 Identities=10% Similarity=0.055 Sum_probs=71.8
Q ss_pred ceEEEEeecCCCCCCCCCCCccEEEEEcCC---cccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC----CCCCCh
Q 042745 62 ALSARLYLPKGTNNNNNNNKLPLLVYIHGG---GFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE----NPVPCA 134 (331)
Q Consensus 62 ~~~~~~~~P~~~~~~~~~~~~p~vv~~HGg---g~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~----~~~~~~ 134 (331)
-..+.-|.|..+ ..-.+.++++|-- .++..... ...+++ ++.+.|..|+.++.+.... -.+.+.
T Consensus 92 v~~liqy~p~~e-----~v~~~PlLiVpP~iNk~yi~Dl~~---~~s~V~-~l~~~g~~vfvIsw~nPd~~~~~~~~edY 162 (445)
T COG3243 92 VLELIQYKPLTE-----KVLKRPLLIVPPWINKFYILDLSP---EKSLVR-WLLEQGLDVFVISWRNPDASLAAKNLEDY 162 (445)
T ss_pred hhhhhccCCCCC-----ccCCCceEeeccccCceeEEeCCC---CccHHH-HHHHcCCceEEEeccCchHhhhhccHHHH
Confidence 344455667665 2233445666641 11211111 124444 4557799999999885432 233344
Q ss_pred H-HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 135 H-DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 135 ~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
+ +.+..+++.+++. ...++|-++|+|.||.++..+++..+.. +|+.+.++....
T Consensus 163 i~e~l~~aid~v~~i-------------tg~~~InliGyCvGGtl~~~ala~~~~k-----~I~S~T~lts~~ 217 (445)
T COG3243 163 ILEGLSEAIDTVKDI-------------TGQKDINLIGYCVGGTLLAAALALMAAK-----RIKSLTLLTSPV 217 (445)
T ss_pred HHHHHHHHHHHHHHH-------------hCccccceeeEecchHHHHHHHHhhhhc-----ccccceeeecch
Confidence 4 6667788888776 3457899999999999999888877653 366665554333
No 153
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.26 E-value=2.8e-06 Score=59.14 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=44.2
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP 130 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~ 130 (331)
|.++..+.|.|++. ++.+|+++||-+-..+ .|..++..|+ +.||.|+.+|+|+++...
T Consensus 1 G~~L~~~~w~p~~~-------~k~~v~i~HG~~eh~~-----ry~~~a~~L~-~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-------PKAVVVIVHGFGEHSG-----RYAHLAEFLA-EQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCC-------CCEEEEEeCCcHHHHH-----HHHHHHHHHH-hCCCEEEEECCCcCCCCC
Confidence 34688889998774 6899999999554333 1667777776 569999999999987653
No 154
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.26 E-value=0.00017 Score=63.92 Aligned_cols=63 Identities=25% Similarity=0.208 Sum_probs=44.9
Q ss_pred cccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeC-CCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 254 LASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETK-GESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 254 l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~-g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
|++++. |++++.=+.|.+.| +.+++++.|...+. +++++ ..+|.-.+. +...+...|..||+.
T Consensus 302 l~~i~~-~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-----~~~i~S~~GHDaFL~-----e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKA-PVLVVGITSDWLFPPELQRALAEALPAAGA-----LREIDSPYGHDAFLV-----ESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCcc-CEEEEEecccccCCHHHHHHHHHhccccCc-----eEEecCCCCchhhhc-----chhhhhHHHHHHhhc
Confidence 666776 99999999999987 67788888887752 44443 457864432 335566788888864
No 155
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.24 E-value=9.8e-05 Score=58.38 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=64.7
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCCCCCCC
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETNGCDDP 243 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (331)
++.++|++||.|+.+++.++.+... .|+|+++++|.-........ .. ..
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~------~V~GalLVAppd~~~~~~~~----------------~~-----~~---- 106 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR------QVAGALLVAPPDVSRPEIRP----------------KH-----LM---- 106 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh------ccceEEEecCCCccccccch----------------hh-----cc----
Confidence 3559999999999999999988754 79999999987643221000 00 00
Q ss_pred CCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCcee
Q 042745 244 WINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHV 303 (331)
Q Consensus 244 ~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~ 303 (331)
.+.+. ....+++ |.++++..+|++++ .++.+++.+ ...++....++|.
T Consensus 107 tf~~~----p~~~lpf-ps~vvaSrnDp~~~~~~a~~~a~~w-------gs~lv~~g~~GHi 156 (181)
T COG3545 107 TFDPI----PREPLPF-PSVVVASRNDPYVSYEHAEDLANAW-------GSALVDVGEGGHI 156 (181)
T ss_pred ccCCC----ccccCCC-ceeEEEecCCCCCCHHHHHHHHHhc-------cHhheeccccccc
Confidence 01111 2334555 99999999999996 444454444 3457777778884
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.21 E-value=4e-05 Score=71.18 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=106.0
Q ss_pred CCccEEEEEcCCc-ccccCCCCchhHHHHHHHHhcCC--eEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCc
Q 042745 80 NKLPLLVYIHGGG-FCIETPFSPFYHSYLNALVSACN--VVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 80 ~~~p~vv~~HGgg-~~~g~~~~~~~~~~~~~la~~~G--~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
...|++|++||++ -..++.. ++.|-..+. ..| ..|..+|++..-+. -....-+...+.+.+....+.. .
T Consensus 174 ~~spl~i~aps~p~ap~tSd~---~~~wqs~ls-l~gevvev~tfdl~n~igG--~nI~h~ae~~vSf~r~kvlei~-g- 245 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDR---MWSWQSRLS-LKGEVVEVPTFDLNNPIGG--ANIKHAAEYSVSFDRYKVLEIT-G- 245 (784)
T ss_pred cCCceEEeccCCCCCCccchH---HHhHHHHHh-hhceeeeeccccccCCCCC--cchHHHHHHHHHHhhhhhhhhh-c-
Confidence 4579999999987 2222222 334333332 334 45566776643211 1222333333333332111110 0
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCC
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSE 236 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
.+....|+|+|.|||+.++.++.....+. .|.++|.+.=.++..+. .
T Consensus 246 ----efpha~IiLvGrsmGAlVachVSpsnsdv-----~V~~vVCigypl~~vdg------------------------p 292 (784)
T KOG3253|consen 246 ----EFPHAPIILVGRSMGALVACHVSPSNSDV-----EVDAVVCIGYPLDTVDG------------------------P 292 (784)
T ss_pred ----cCCCCceEEEecccCceeeEEeccccCCc-----eEEEEEEecccccCCCc------------------------c
Confidence 14557899999999988877776655432 58888887522221110 0
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCC-----
Q 042745 237 TNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNP----- 309 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~----- 309 (331)
....|+ .+-.++. |+|++.|..|..++ ..+.+.+++++ .++++++.+++|.+..-..
T Consensus 293 -rgirDE---------~Lldmk~-PVLFV~Gsnd~mcspn~ME~vreKMqA-----~~elhVI~~adhsmaipk~k~ese 356 (784)
T KOG3253|consen 293 -RGIRDE---------ALLDMKQ-PVLFVIGSNDHMCSPNSMEEVREKMQA-----EVELHVIGGADHSMAIPKRKVESE 356 (784)
T ss_pred -cCCcch---------hhHhcCC-ceEEEecCCcccCCHHHHHHHHHHhhc-----cceEEEecCCCccccCCccccccc
Confidence 011111 2222333 99999999999885 44567777766 4789999999998764321
Q ss_pred ---CcHHHHHHHHHHHHHhhcc
Q 042745 310 ---NSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 310 ---~~~~~~~~~~~i~~fl~~~ 328 (331)
+.+.....++.|.+|+...
T Consensus 357 gltqseVd~~i~~aI~efvt~~ 378 (784)
T KOG3253|consen 357 GLTQSEVDSAIAQAIKEFVTIA 378 (784)
T ss_pred cccHHHHHHHHHHHHHHHHHHh
Confidence 1122344556666676543
No 157
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.19 E-value=0.0003 Score=63.35 Aligned_cols=146 Identities=18% Similarity=0.141 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCC--
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPV-- 212 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~-- 212 (331)
..|...|+.++..+....+ +.-++.++|+|.||++|+..|.-.+- .+.+++--|.+..+....
T Consensus 163 AiD~INAl~~l~k~~~~~~---------~~lp~I~~G~s~G~yla~l~~k~aP~------~~~~~iDns~~~~p~l~~I~ 227 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNG---------GGLPKIYIGSSHGGYLAHLCAKIAPW------LFDGVIDNSSYALPPLRYIF 227 (403)
T ss_pred HHHHHHHHHHHHHhhhccc---------CCCcEEEEecCcHHHHHHHHHhhCcc------ceeEEEecCccccchhheee
Confidence 3588888888888754332 12389999999999999999887754 799999888776432111
Q ss_pred CCCcc--------------CchhhhHHHHHHHhhccCCC-CCCCCCCCCCCCCCCC--cc-cC-CCCeEEEEEeCCCccc
Q 042745 213 GNETT--------------DAKHRAFFDGIWRMGYRSET-NGCDDPWINPCVEGSS--LA-SM-GCARVLVFVAEKDKLA 273 (331)
Q Consensus 213 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--l~-~~-~~~Pvli~~G~~D~~v 273 (331)
..+.. .....-....+|..-....- .......+..+..... ++ +. +.+-.+..|+..|.+.
T Consensus 228 Gre~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~ 307 (403)
T PF11144_consen 228 GREIDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLA 307 (403)
T ss_pred eeecCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCC
Confidence 11100 00011112223322100000 0000000000000000 11 11 2225677899999998
Q ss_pred h--hHHHHHHHHHhcCCCcceEEEEe
Q 042745 274 A--RGWLYYEKLKESGWKGRAEIVET 297 (331)
Q Consensus 274 ~--~~~~~~~~l~~~g~~~~~~~~~~ 297 (331)
| +-+++++.+++.|. +++++.+
T Consensus 308 p~~~K~~l~~~l~~lgf--da~l~lI 331 (403)
T PF11144_consen 308 PAEDKEELYEILKNLGF--DATLHLI 331 (403)
T ss_pred CHHHHHHHHHHHHHcCC--CeEEEEe
Confidence 7 67789999999999 9999988
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.14 E-value=2.7e-05 Score=60.78 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=64.9
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhccCCCC--CCCC
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSETN--GCDD 242 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 242 (331)
+.+.|+|-|.||+.|.+++.+.. +++++ ++|.+.+.+... .+.+..++ ....
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~G--------irav~-~NPav~P~e~l~-----------------gylg~~en~ytg~~ 112 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLCG--------IRAVV-FNPAVRPYELLT-----------------GYLGRPENPYTGQE 112 (191)
T ss_pred CCceEEeecchHHHHHHHHHHhC--------Chhhh-cCCCcCchhhhh-----------------hhcCCCCCCCCcce
Confidence 34999999999999999999874 55553 456554322211 11110000 0000
Q ss_pred C-----CCCCCCCCCCcccCCCCeEEEEEe-CCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHH
Q 042745 243 P-----WINPCVEGSSLASMGCARVLVFVA-EKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARV 316 (331)
Q Consensus 243 ~-----~~~~~~~~~~l~~~~~~Pvli~~G-~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 316 (331)
. .+..+... ++..+..|..+.+.. +-|.+.+ .++....++ .+...+++|.+|.|..+ ..
T Consensus 113 y~le~~hI~~l~~~-~~~~l~~p~~~~lL~qtgDEvLD-yr~a~a~y~------~~~~~V~dgg~H~F~~f-------~~ 177 (191)
T COG3150 113 YVLESRHIATLCVL-QFRELNRPRCLVLLSQTGDEVLD-YRQAVAYYH------PCYEIVWDGGDHKFKGF-------SR 177 (191)
T ss_pred EEeehhhHHHHHHh-hccccCCCcEEEeecccccHHHH-HHHHHHHhh------hhhheeecCCCccccch-------HH
Confidence 0 00001001 333344444444444 4476654 222222232 35667889999998844 56
Q ss_pred HHHHHHHHhhc
Q 042745 317 MLQQIASFFNL 327 (331)
Q Consensus 317 ~~~~i~~fl~~ 327 (331)
.++.|..|..-
T Consensus 178 ~l~~i~aF~gl 188 (191)
T COG3150 178 HLQRIKAFKGL 188 (191)
T ss_pred hHHHHHHHhcc
Confidence 78888888753
No 159
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.12 E-value=0.0004 Score=62.55 Aligned_cols=215 Identities=16% Similarity=0.196 Sum_probs=128.8
Q ss_pred ceEEEEeecCCCCCCCCCCCccEEEEEcCCc---ccccCCCCchhHHHHHHHHhcCCeEEEEec--------CCCCC---
Q 042745 62 ALSARLYLPKGTNNNNNNNKLPLLVYIHGGG---FCIETPFSPFYHSYLNALVSACNVVAVSVD--------YRRAP--- 127 (331)
Q Consensus 62 ~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg---~~~g~~~~~~~~~~~~~la~~~G~~vv~~d--------yr~~~--- 127 (331)
...+.|+.|++. ......+|++-||. +...... .....+..+|...|..|+.+. |...+
T Consensus 49 ~H~l~I~vP~~~-----~~~~~all~i~gG~~~~~~~~~~~--~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r 121 (367)
T PF10142_consen 49 WHWLTIYVPKND-----KNPDTALLFITGGSNRNWPGPPPD--FDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPR 121 (367)
T ss_pred EEEEEEEECCCC-----CCCceEEEEEECCcccCCCCCCCc--chHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccc
Confidence 357889999983 25678899999986 2222211 245777888888887776643 21111
Q ss_pred -----------------CCCCCC---hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 128 -----------------ENPVPC---AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 128 -----------------~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
+..++. +..-+..|++-+.+...+.. +++.++.+|.|.|==|+.+..+|+..+
T Consensus 122 ~ED~iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~-------~~~i~~FvV~GaSKRGWTtWltaa~D~ 194 (367)
T PF10142_consen 122 TEDAIIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKF-------GVNIEKFVVTGASKRGWTTWLTAAVDP 194 (367)
T ss_pred cHHHHHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhc-------CCCccEEEEeCCchHhHHHHHhhccCc
Confidence 111222 22344555555555433221 278899999999999999999988543
Q ss_pred ccccCCCceeEEEEe-cccccCCCCCCCCccCchhhhHHHHHHHhhccCC------------CCCCCC-------CCCCC
Q 042745 188 REILDGFNVAGIVLV-HPYFWGSTPVGNETTDAKHRAFFDGIWRMGYRSE------------TNGCDD-------PWINP 247 (331)
Q Consensus 188 ~~~~~~~~i~~~i~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-------~~~~~ 247 (331)
+|++++-+ -+.++... .+...++.+.+.. ...... ..+.|
T Consensus 195 -------RV~aivP~Vid~LN~~~-------------~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP 254 (367)
T PF10142_consen 195 -------RVKAIVPIVIDVLNMKA-------------NLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDP 254 (367)
T ss_pred -------ceeEEeeEEEccCCcHH-------------HHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCH
Confidence 78888754 34443221 1111122111011 000011 11233
Q ss_pred CCCCCCcccCCCCeEEEEEeCCCccc-h-hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 248 CVEGSSLASMGCARVLVFVAEKDKLA-A-RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 248 ~~~~~~l~~~~~~Pvli~~G~~D~~v-~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
+. ..+++.. |-||+.|+.|.+. + .+.-|...|.. +..+..+|+++|.... .++++.+..|+
T Consensus 255 ~~---Y~~rL~~-PK~ii~atgDeFf~pD~~~~y~d~L~G-----~K~lr~vPN~~H~~~~--------~~~~~~l~~f~ 317 (367)
T PF10142_consen 255 YS---YRDRLTM-PKYIINATGDEFFVPDSSNFYYDKLPG-----EKYLRYVPNAGHSLIG--------SDVVQSLRAFY 317 (367)
T ss_pred HH---HHHhcCc-cEEEEecCCCceeccCchHHHHhhCCC-----CeeEEeCCCCCcccch--------HHHHHHHHHHH
Confidence 33 3345666 8999999888654 4 66777777764 4579999999997552 56778888888
Q ss_pred hc
Q 042745 326 NL 327 (331)
Q Consensus 326 ~~ 327 (331)
+.
T Consensus 318 ~~ 319 (367)
T PF10142_consen 318 NR 319 (367)
T ss_pred HH
Confidence 75
No 160
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=0.00083 Score=56.12 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=70.5
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCC--eEEEE---ecCCCCCC------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACN--VVAVS---VDYRRAPE------ 128 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G--~~vv~---~dyr~~~~------ 128 (331)
+..+..-.+.|--. .+...++.|+++-|..+..|- |..+.+.+....+ ..|+. .+.-+.|.
T Consensus 10 gl~~si~~~~~~v~---~~~~~~~li~~IpGNPG~~gF-----Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 10 GLPTSILTLKPWVT---KSGEDKPLIVWIPGNPGLLGF-----YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred CCcccceeeeeeec---cCCCCceEEEEecCCCCchhH-----HHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 33444444444333 223678899999985543322 6677777766555 22222 23333331
Q ss_pred -CC---CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 129 -NP---VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 129 -~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
+. .-...+++..-++++++.. ....+|.++|||-|+++.+.+........ .+..++++-|
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~------------Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~----~vqKa~~LFP 145 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYV------------PKDRKIYIIGHSIGAYMVLQILPSIKLVF----SVQKAVLLFP 145 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhC------------CCCCEEEEEecchhHHHHHHHhhhccccc----ceEEEEEecc
Confidence 11 1122356778888888874 33479999999999999999887543321 4555555444
No 161
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.08 E-value=2.1e-05 Score=68.99 Aligned_cols=63 Identities=21% Similarity=0.276 Sum_probs=48.5
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
|+|++||.+|..++ .+..+++..+.. +.+.+.++++.|...... .+...+.++++.+||.+++
T Consensus 234 P~l~~~G~~D~~vp~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 234 PVLLVHGERDEVVPLRDAEDLYEAARER----PKKLLFVPGGGHIDLYDN--PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred ceEEEecCCCcccchhhhHHHHhhhccC----CceEEEecCCccccccCc--cHHHHHHHHHHHHHHHHhc
Confidence 99999999999987 566676766664 357788888899766422 2445689999999999875
No 162
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.08 E-value=4.4e-06 Score=65.22 Aligned_cols=185 Identities=14% Similarity=0.089 Sum_probs=108.1
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCe-EEEEecCCCCCC-----CCC-CChHHHHHHHHHHHHHhccCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNV-VAVSVDYRRAPE-----NPV-PCAHDDSWAAIKWVASHVNGSG 153 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~-~vv~~dyr~~~~-----~~~-~~~~~d~~~~~~~l~~~~~~~~ 153 (331)
..|+|+|--.+|-....... +....+..+.. .|. ....++ .+..+ +.. ...++--.+.-+|++.+.
T Consensus 26 G~pVvvFpts~Grf~eyed~-G~v~ala~fie-~G~vQlft~~-gldsESf~a~h~~~adr~~rH~AyerYv~eEa---- 98 (227)
T COG4947 26 GIPVVVFPTSGGRFNEYEDF-GMVDALASFIE-EGLVQLFTLS-GLDSESFLATHKNAADRAERHRAYERYVIEEA---- 98 (227)
T ss_pred CCcEEEEecCCCcchhhhhc-ccHHHHHHHHh-cCcEEEEEec-ccchHhHhhhcCCHHHHHHHHHHHHHHHHHhh----
Confidence 46888888766533322211 11223334433 363 333333 11111 111 122333344556777763
Q ss_pred CCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCCCCCCCccCchhhhHHHHHHHhhc
Q 042745 154 PEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGSTPVGNETTDAKHRAFFDGIWRMGY 233 (331)
Q Consensus 154 ~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
-+.+..+.|.||||..|+++..+.++ .+.++|.+|+.++...-...+..+........ .+.
T Consensus 99 ---------lpgs~~~sgcsmGayhA~nfvfrhP~------lftkvialSGvYdardffg~yyddDv~ynsP~----dyl 159 (227)
T COG4947 99 ---------LPGSTIVSGCSMGAYHAANFVFRHPH------LFTKVIALSGVYDARDFFGGYYDDDVYYNSPS----DYL 159 (227)
T ss_pred ---------cCCCccccccchhhhhhhhhheeChh------HhhhheeecceeeHHHhccccccCceeecChh----hhc
Confidence 34568899999999999999999986 78999999999876543332222111000000 000
Q ss_pred cCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeee
Q 042745 234 RSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFH 305 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~ 305 (331)
++ ..++. .+..+...-+.+..|..|+..+..+.+.+.|.++.+ +..+.++.|..|.+.
T Consensus 160 pg----~~dp~--------~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqi--paw~~~WggvaHdw~ 217 (227)
T COG4947 160 PG----LADPF--------RLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQI--PAWMHVWGGVAHDWG 217 (227)
T ss_pred cC----CcChH--------HHHHHhhccEEEEecCccccccchHHHHHHhccccc--cHHHHHhcccccccH
Confidence 00 01111 122222226888999999999999999999999988 888999999889755
No 163
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.07 E-value=3e-05 Score=63.53 Aligned_cols=127 Identities=17% Similarity=0.202 Sum_probs=77.2
Q ss_pred HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHH--hhcccccCCCceeEEEEecccccCCCCCCCCc
Q 042745 139 WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGI--RNGREILDGFNVAGIVLVHPYFWGSTPVGNET 216 (331)
Q Consensus 139 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~--~~~~~~~~~~~i~~~i~~~p~~~~~~~~~~~~ 216 (331)
..+++||.+...+.| .+| +|+|+|.|+.++..++. .....-...+.++-+|++|++.......
T Consensus 89 eesl~yl~~~i~enG-------PFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~---- 153 (230)
T KOG2551|consen 89 EESLEYLEDYIKENG-------PFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL---- 153 (230)
T ss_pred HHHHHHHHHHHHHhC-------CCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh----
Confidence 345666666655444 233 59999999999999887 2221112234789999999887432110
Q ss_pred cCchhhhHHHHHHHhhccCCCCCCCCCCCCCCCCCCCcccCCCCeEEEEEeCCCccchh--HHHHHHHHHhcCCCcceEE
Q 042745 217 TDAKHRAFFDGIWRMGYRSETNGCDDPWINPCVEGSSLASMGCARVLVFVAEKDKLAAR--GWLYYEKLKESGWKGRAEI 294 (331)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~ 294 (331)
.... ....+.+ |.|-+.|+.|.+++. +..+++...+. .+
T Consensus 154 ------------------------~~~~--------~~~~i~~-PSLHi~G~~D~iv~~~~s~~L~~~~~~a------~v 194 (230)
T KOG2551|consen 154 ------------------------DESA--------YKRPLST-PSLHIFGETDTIVPSERSEQLAESFKDA------TV 194 (230)
T ss_pred ------------------------hhhh--------hccCCCC-CeeEEecccceeecchHHHHHHHhcCCC------eE
Confidence 0000 1223445 999999999999974 46666665543 33
Q ss_pred EEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 295 VETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 295 ~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
+. ..++|..... ....+.|.+||+.
T Consensus 195 l~-HpggH~VP~~-------~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 195 LE-HPGGHIVPNK-------AKYKEKIADFIQS 219 (230)
T ss_pred Ee-cCCCccCCCc-------hHHHHHHHHHHHH
Confidence 44 4458965522 3556666666654
No 164
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.03 E-value=3.7e-05 Score=66.80 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=80.3
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC---CCCCCChH-
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP---ENPVPCAH- 135 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~---~~~~~~~~- 135 (331)
++++......-... ..+...-+||.+-|...+..-. .+.. -.+.||.|+..+.++.. ..++|..-
T Consensus 224 gneiDtmF~d~r~n---~~~ngq~LvIC~EGNAGFYEvG-------~m~t-P~~lgYsvLGwNhPGFagSTG~P~p~n~~ 292 (517)
T KOG1553|consen 224 GNEIDTMFLDGRPN---QSGNGQDLVICFEGNAGFYEVG-------VMNT-PAQLGYSVLGWNHPGFAGSTGLPYPVNTL 292 (517)
T ss_pred CcchhheeecCCCC---CCCCCceEEEEecCCccceEee-------eecC-hHHhCceeeccCCCCccccCCCCCcccch
Confidence 55555554443333 2345677899999865433221 1112 23569999999987654 34555433
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
.-+.++++|...... +..+.|+|+|+|.||+-++++|..++ .++++|+-+.+-|
T Consensus 293 nA~DaVvQfAI~~Lg-----------f~~edIilygWSIGGF~~~waAs~YP-------dVkavvLDAtFDD 346 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLG-----------FRQEDIILYGWSIGGFPVAWAASNYP-------DVKAVVLDATFDD 346 (517)
T ss_pred HHHHHHHHHHHHHcC-----------CCccceEEEEeecCCchHHHHhhcCC-------CceEEEeecchhh
Confidence 344567778777753 88899999999999999999999997 5999999776543
No 165
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.84 E-value=0.0045 Score=53.16 Aligned_cols=221 Identities=16% Similarity=0.188 Sum_probs=128.8
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCch-hHHHHHHHHhcCCeEEEEecCCCCCC--------CC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPF-YHSYLNALVSACNVVAVSVDYRRAPE--------NP 130 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~-~~~~~~~la~~~G~~vv~~dyr~~~~--------~~ 130 (331)
.+.+.+.++--.. +++|+||-.|.=|-..-+..... ..+-+..+. + .+.|+-+|-++..+ +.
T Consensus 31 ~G~v~V~V~Gd~~-------~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~-~fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 31 HGVVHVTVYGDPK-------GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-E-HFCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred cccEEEEEecCCC-------CCCceEEEecccccchHhHhHHhhcCHhHHHHH-h-heEEEecCCCccccCCccCCCCCC
Confidence 4567777765433 36889999998543222211100 113334554 3 38888888775422 23
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 131 VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 131 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
+| .++|+.+.+..+.+. +..+-|+-+|--+|+++-..+|..+++ +|-|+||+++.-....
T Consensus 102 yP-smd~LAd~l~~VL~~-------------f~lk~vIg~GvGAGAyIL~rFAl~hp~------rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 102 YP-SMDDLADMLPEVLDH-------------FGLKSVIGMGVGAGAYILARFALNHPE------RVLGLVLINCDPCAKG 161 (326)
T ss_pred CC-CHHHHHHHHHHHHHh-------------cCcceEEEecccccHHHHHHHHhcChh------heeEEEEEecCCCCch
Confidence 33 356666666666665 456789999999999999999999987 8999999986321110
Q ss_pred CC-------------------------------CCCccC-ch-------------hhhHHHHHHHhhccCCCCCCCCCCC
Q 042745 211 PV-------------------------------GNETTD-AK-------------HRAFFDGIWRMGYRSETNGCDDPWI 245 (331)
Q Consensus 211 ~~-------------------------------~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
.. .++... .. ....+..++..+. .+.+-.+
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn-----~R~DL~~ 236 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYN-----GRRDLSI 236 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhc-----CCCCccc
Confidence 00 000000 00 0011112222221 1111111
Q ss_pred CCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 246 NPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 246 ~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
. ... ....++| |+|++.|+.-+.++...+...+|... ...+....+++-.... ++...+.+.+.=|+
T Consensus 237 ~--r~~-~~~tlkc-~vllvvGd~Sp~~~~vv~~n~~Ldp~----~ttllk~~d~g~l~~e-----~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 237 E--RPK-LGTTLKC-PVLLVVGDNSPHVSAVVECNSKLDPT----YTTLLKMADCGGLVQE-----EQPGKLAEAFKYFL 303 (326)
T ss_pred c--CCC-cCccccc-cEEEEecCCCchhhhhhhhhcccCcc----cceEEEEcccCCcccc-----cCchHHHHHHHHHH
Confidence 1 000 1225668 99999999999999888888888665 5688888887664442 23456667777677
Q ss_pred hc
Q 042745 326 NL 327 (331)
Q Consensus 326 ~~ 327 (331)
+.
T Consensus 304 qG 305 (326)
T KOG2931|consen 304 QG 305 (326)
T ss_pred cc
Confidence 64
No 166
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.82 E-value=0.00013 Score=62.14 Aligned_cols=115 Identities=13% Similarity=0.086 Sum_probs=63.2
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCe--EEEEecCCCCCCC-CCCC---hHHHHHHHHHHHHHhccCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNV--VAVSVDYRRAPEN-PVPC---AHDDSWAAIKWVASHVNGSG 153 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~--~vv~~dyr~~~~~-~~~~---~~~d~~~~~~~l~~~~~~~~ 153 (331)
.++.++||+||....... -...+.++....++ .++.+.++..+.. .+.. ........+..+.......
T Consensus 16 ~~~~vlvfVHGyn~~f~~-----a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-----ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-----HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-
Confidence 467899999983321111 11233445555554 6777777654321 1111 1112222222222221110
Q ss_pred CCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccC---CCceeEEEEecccccC
Q 042745 154 PEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILD---GFNVAGIVLVHPYFWG 208 (331)
Q Consensus 154 ~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~---~~~i~~~i~~~p~~~~ 208 (331)
....+|-|++||||+.+.+.+.......... ...+..+|+.+|-++.
T Consensus 90 --------~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 --------PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred --------cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 2458999999999999999887665443210 1267889998887753
No 167
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.82 E-value=0.00023 Score=61.27 Aligned_cols=217 Identities=16% Similarity=0.206 Sum_probs=114.6
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchh-HHHHHHHHhcCCeEEEEecCCCCCC--------CC
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFY-HSYLNALVSACNVVAVSVDYRRAPE--------NP 130 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~~~la~~~G~~vv~~dyr~~~~--------~~ 130 (331)
-+.+.+.++-..+ +++|+||=+|-=|-..-+.-...+ ..-+..+. + .+.++=+|.++..+ +.
T Consensus 8 ~G~v~V~v~G~~~-------~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~-~f~i~Hi~aPGqe~ga~~~p~~y~ 78 (283)
T PF03096_consen 8 YGSVHVTVQGDPK-------GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-Q-NFCIYHIDAPGQEEGAATLPEGYQ 78 (283)
T ss_dssp TEEEEEEEESS---------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-T-TSEEEEEE-TTTSTT-----TT--
T ss_pred ceEEEEEEEecCC-------CCCceEEEeccccccchHHHHHHhcchhHHHHh-h-ceEEEEEeCCCCCCCccccccccc
Confidence 3456666664322 379999999984422211100000 12233343 3 78888889887643 12
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 131 VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 131 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
+| .++++.+.+..+.+. +..+.++-+|--+|+++-+.+|..+++ ++.|+|+++|......
T Consensus 79 yP-smd~LAe~l~~Vl~~-------------f~lk~vIg~GvGAGAnIL~rfAl~~p~------~V~GLiLvn~~~~~~g 138 (283)
T PF03096_consen 79 YP-SMDQLAEMLPEVLDH-------------FGLKSVIGFGVGAGANILARFALKHPE------RVLGLILVNPTCTAAG 138 (283)
T ss_dssp ----HHHHHCTHHHHHHH-------------HT---EEEEEETHHHHHHHHHHHHSGG------GEEEEEEES---S---
T ss_pred cc-CHHHHHHHHHHHHHh-------------CCccEEEEEeeccchhhhhhccccCcc------ceeEEEEEecCCCCcc
Confidence 32 244555555555554 345779999999999999999999987 8999999998432110
Q ss_pred C-----------------CCCCc---------------cCch-------------hhhHHHHHHHhhccCCCCCCCCCCC
Q 042745 211 P-----------------VGNET---------------TDAK-------------HRAFFDGIWRMGYRSETNGCDDPWI 245 (331)
Q Consensus 211 ~-----------------~~~~~---------------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
. ..... .... ...-+..++..+.. +. .+
T Consensus 139 w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~-----R~--DL 211 (283)
T PF03096_consen 139 WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNS-----RT--DL 211 (283)
T ss_dssp HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc-----cc--cc
Confidence 0 00000 0000 00111112222211 11 11
Q ss_pred CCCCCCCCcccCCCCeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 246 NPCVEGSSLASMGCARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 246 ~~~~~~~~l~~~~~~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
+. ..+...+ |+|++.|+.-+.++++.++..+|... ..++...++++=... .+++.++.+.+.=||
T Consensus 212 ~~-----~~~~~~c-~vLlvvG~~Sp~~~~vv~~ns~Ldp~----~ttllkv~dcGglV~-----eEqP~klaea~~lFl 276 (283)
T PF03096_consen 212 SI-----ERPSLGC-PVLLVVGDNSPHVDDVVEMNSKLDPT----KTTLLKVADCGGLVL-----EEQPGKLAEAFKLFL 276 (283)
T ss_dssp -S-----ECTTCCS--EEEEEETTSTTHHHHHHHHHHS-CC----CEEEEEETT-TT-HH-----HH-HHHHHHHHHHHH
T ss_pred hh-----hcCCCCC-CeEEEEecCCcchhhHHHHHhhcCcc----cceEEEecccCCccc-----ccCcHHHHHHHHHHH
Confidence 11 3344556 99999999999999999999999655 689999998854322 356677777787787
Q ss_pred hc
Q 042745 326 NL 327 (331)
Q Consensus 326 ~~ 327 (331)
+.
T Consensus 277 QG 278 (283)
T PF03096_consen 277 QG 278 (283)
T ss_dssp HH
T ss_pred cc
Confidence 74
No 168
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.80 E-value=4.8e-05 Score=63.67 Aligned_cols=84 Identities=20% Similarity=0.230 Sum_probs=45.3
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeE---EEEecCCCCCCCCCCC-------hHHHHHHHHHHHHHhccCCC
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVV---AVSVDYRRAPENPVPC-------AHDDSWAAIKWVASHVNGSG 153 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~---vv~~dyr~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~ 153 (331)
.|||+||-+ ++.. ..|..+...|. +.||. +.+.+|.......... ...++.+.++-+++.
T Consensus 3 PVVlVHG~~---~~~~-~~w~~~~~~l~-~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~----- 72 (219)
T PF01674_consen 3 PVVLVHGTG---GNAY-SNWSTLAPYLK-AAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY----- 72 (219)
T ss_dssp -EEEE--TT---TTTC-GGCCHHHHHHH-HTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH-----
T ss_pred CEEEECCCC---cchh-hCHHHHHHHHH-HcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh-----
Confidence 489999944 2121 12556666665 55998 7999997544312111 123455555555544
Q ss_pred CCccccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 154 PEDWLNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 154 ~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
... +|-|+||||||.+|..+....
T Consensus 73 --------TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 73 --------TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp --------HT---EEEEEETCHHHHHHHHHHHC
T ss_pred --------hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 445 899999999999998887644
No 169
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.78 E-value=0.014 Score=54.14 Aligned_cols=108 Identities=18% Similarity=0.144 Sum_probs=68.0
Q ss_pred eEEEEeecCCCCCCCCCCCccEEEEE----cCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHH
Q 042745 63 LSARLYLPKGTNNNNNNNKLPLLVYI----HGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDS 138 (331)
Q Consensus 63 ~~~~~~~P~~~~~~~~~~~~p~vv~~----HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~ 138 (331)
..++|.-|.+.. ....++|.||+= ||-| +.|-+.+ +. + -.+.+.|+-|..+.+.-.|. -.+.++|+
T Consensus 52 aLlrI~pp~~~~--~d~~krP~vViDPRAGHGpG-IGGFK~d---Se-v-G~AL~~GHPvYFV~F~p~P~--pgQTl~DV 121 (581)
T PF11339_consen 52 ALLRITPPEGVP--VDPTKRPFVVIDPRAGHGPG-IGGFKPD---SE-V-GVALRAGHPVYFVGFFPEPE--PGQTLEDV 121 (581)
T ss_pred eEEEeECCCCCC--CCCCCCCeEEeCCCCCCCCC-ccCCCcc---cH-H-HHHHHcCCCeEEEEecCCCC--CCCcHHHH
Confidence 455666666641 234667777763 6633 4444432 22 2 23345588887777664442 12457888
Q ss_pred HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 139 WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 139 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
..+.........+++ -+..+..|+|-+.||+.++.+|+..++
T Consensus 122 ~~ae~~Fv~~V~~~h--------p~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 122 MRAEAAFVEEVAERH--------PDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHHHHHHHHHHhC--------CCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 776655555544443 444599999999999999999999876
No 170
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.74 E-value=0.00012 Score=68.44 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=76.4
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC----------
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN---------- 129 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~---------- 129 (331)
..+..-+.|.-... -.+..|++||+-|-+ ...... ....++..+|.+.|..++..+.|..++.
T Consensus 11 ~~tf~qRY~~n~~~----~~~~gpifl~~ggE~-~~~~~~--~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~n 83 (434)
T PF05577_consen 11 NGTFSQRYWVNDQY----YKPGGPIFLYIGGEG-PIEPFW--INNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTEN 83 (434)
T ss_dssp T-EEEEEEEEE-TT------TTSEEEEEE--SS--HHHHH--HH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGST
T ss_pred CCeEEEEEEEEhhh----cCCCCCEEEEECCCC-ccchhh--hcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhh
Confidence 44566666666554 123478888875432 222110 1234677899999999999999977642
Q ss_pred ----CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 130 ----PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 130 ----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
+..+.+.|+...+++++.... ..+..+++++|.|.||.+|+.+-.++++ .+.|.++-|+.
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~----------~~~~~pwI~~GgSY~G~Laaw~r~kyP~------~~~ga~ASSap 147 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYN----------TAPNSPWIVFGGSYGGALAAWFRLKYPH------LFDGAWASSAP 147 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTT----------TGCC--EEEEEETHHHHHHHHHHHH-TT------T-SEEEEET--
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhc----------CCCCCCEEEECCcchhHHHHHHHhhCCC------eeEEEEeccce
Confidence 123467888888888885431 1344689999999999999999999987 68888887765
Q ss_pred c
Q 042745 206 F 206 (331)
Q Consensus 206 ~ 206 (331)
+
T Consensus 148 v 148 (434)
T PF05577_consen 148 V 148 (434)
T ss_dssp C
T ss_pred e
Confidence 4
No 171
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.68 E-value=0.00099 Score=62.60 Aligned_cols=66 Identities=15% Similarity=0.091 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccc----cCCCceeEEEEecccccCC
Q 042745 134 AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREI----LDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 134 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~----~~~~~i~~~i~~~p~~~~~ 209 (331)
..+|+..+++.+.+...+ ....++.|+|+|+||..+..+|.+..+.. .....++|+++-+|+.+..
T Consensus 150 ~a~d~~~~l~~f~~~~p~----------~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHED----------LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHHHHHhCcc----------ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 445666555544433221 34578999999999999988887653211 1124799999999988654
No 172
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.66 E-value=0.0044 Score=58.41 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=51.5
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcC------CCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccCCC
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESG------WKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQDKP 331 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g------~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 331 (331)
.++++||..|.+++ .+..|++++.+.- +..-++++..||++|+....- ...-+.+..+.+|+.+...|
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g---~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG---PDPFDALTALVDWVENGKAP 430 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC---CCCCCHHHHHHHHHhCCCCC
Confidence 89999999999986 6788888876542 112378999999999986432 12237899999999887655
No 173
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.001 Score=54.16 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=66.7
Q ss_pred CCCccEEEEEcCCcccccCCCC-----------chhHHHHHHHHhcCCeEEEEecCCCC---------CCCCCCChHHHH
Q 042745 79 NNKLPLLVYIHGGGFCIETPFS-----------PFYHSYLNALVSACNVVAVSVDYRRA---------PENPVPCAHDDS 138 (331)
Q Consensus 79 ~~~~p~vv~~HGgg~~~g~~~~-----------~~~~~~~~~la~~~G~~vv~~dyr~~---------~~~~~~~~~~d~ 138 (331)
..+..++|+|||+|.+....+. ..-.+++++. ...||-|++.+--.. |.-.....++-+
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA-v~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~ 176 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA-VAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHA 176 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH-HHcCCcEEEeCCchhhhhhhcccCcchhccchHHHH
Confidence 3567799999999876533210 0012455543 344776666542211 111122455666
Q ss_pred HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe
Q 042745 139 WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV 202 (331)
Q Consensus 139 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~ 202 (331)
..++..+... ..++.|+++.||.||.+.+.+..+.++.. .|.++.+-
T Consensus 177 ~yvw~~~v~p-------------a~~~sv~vvahsyGG~~t~~l~~~f~~d~----~v~aialT 223 (297)
T KOG3967|consen 177 KYVWKNIVLP-------------AKAESVFVVAHSYGGSLTLDLVERFPDDE----SVFAIALT 223 (297)
T ss_pred HHHHHHHhcc-------------cCcceEEEEEeccCChhHHHHHHhcCCcc----ceEEEEee
Confidence 6666666654 56789999999999999999999987643 67766654
No 174
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.63 E-value=0.00051 Score=58.89 Aligned_cols=102 Identities=17% Similarity=0.053 Sum_probs=63.7
Q ss_pred cEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCC-CCCCChHHHHH-HHHHHHHHhccCCCCCccccc
Q 042745 83 PLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPE-NPVPCAHDDSW-AAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~-~~~~~~~~d~~-~~~~~l~~~~~~~~~~~~~~~ 160 (331)
|+++++|+++.. ... |..+...+. . -..|+..++++... ......++|+. ..++.+++.
T Consensus 1 ~pLF~fhp~~G~---~~~--~~~L~~~l~-~-~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~------------ 61 (257)
T COG3319 1 PPLFCFHPAGGS---VLA--YAPLAAALG-P-LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV------------ 61 (257)
T ss_pred CCEEEEcCCCCc---HHH--HHHHHHHhc-c-CceeeccccCcccccccccCCHHHHHHHHHHHHHHh------------
Confidence 578999996532 211 444444443 2 37778888886642 12223344443 344444443
Q ss_pred cCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 161 YADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
-.--.+.|.|+|+||.+|..+|.+....+. .+..++++-+...
T Consensus 62 -QP~GPy~L~G~S~GG~vA~evA~qL~~~G~---~Va~L~llD~~~~ 104 (257)
T COG3319 62 -QPEGPYVLLGWSLGGAVAFEVAAQLEAQGE---EVAFLGLLDAVPP 104 (257)
T ss_pred -CCCCCEEEEeeccccHHHHHHHHHHHhCCC---eEEEEEEeccCCC
Confidence 122479999999999999999999877653 6888887755443
No 175
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.62 E-value=0.0016 Score=55.76 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=50.2
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHh
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFF 325 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 325 (331)
|-+.+.++.|.+++ +.+++++..++.|. +++...+++..|+-.+. ...++.++.+.+|+
T Consensus 180 p~lylYS~~D~l~~~~~ve~~~~~~~~~G~--~V~~~~f~~S~HV~H~r----~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 180 PRLYLYSKADPLIPWRDVEEHAEEARRKGW--DVRAEKFEDSPHVAHLR----KHPDRYWRAVDEFW 240 (240)
T ss_pred CeEEecCCCCcCcCHHHHHHHHHHHHHcCC--eEEEecCCCCchhhhcc----cCHHHHHHHHHhhC
Confidence 89999999999997 67889999999998 89999999999987644 34578888888774
No 176
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.52 E-value=0.00027 Score=65.51 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=56.8
Q ss_pred hHHHHHHHHhcCCeEEEEecCCCCCCCC-----CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHH
Q 042745 103 YHSYLNALVSACNVVAVSVDYRRAPENP-----VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGAN 177 (331)
Q Consensus 103 ~~~~~~~la~~~G~~vv~~dyr~~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~ 177 (331)
|..++..|. +.||.+ ..|.++.|-.. ....++++...++.+.+. ...++|.|+||||||.
T Consensus 110 ~~~li~~L~-~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~-------------~g~~kV~LVGHSMGGl 174 (440)
T PLN02733 110 FHDMIEQLI-KWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKA-------------SGGKKVNIISHSMGGL 174 (440)
T ss_pred HHHHHHHHH-HcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHH-------------cCCCCEEEEEECHhHH
Confidence 455666665 568865 56666554311 122345555555555443 3347899999999999
Q ss_pred HHHHHHHhhcccccCCCceeEEEEecccccCC
Q 042745 178 IAHHMGIRNGREILDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 178 ~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~ 209 (331)
+++.++...++.. ...|+.+|++++.+...
T Consensus 175 va~~fl~~~p~~~--~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 175 LVKCFMSLHSDVF--EKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHCCHhH--HhHhccEEEECCCCCCC
Confidence 9999887765421 12588888887655443
No 177
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.52 E-value=0.00046 Score=60.89 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=68.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCe--EEEEecCCCCCC---C-----CCCChHHHHHHHHHHHHHhc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNV--VAVSVDYRRAPE---N-----PVPCAHDDSWAAIKWVASHV 149 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~--~vv~~dyr~~~~---~-----~~~~~~~d~~~~~~~l~~~~ 149 (331)
..+-++||+||-....... ..-..+++...|+ +.+.+...-.+. + .......++...+++|.+.
T Consensus 114 ~~k~vlvFvHGfNntf~da-----v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~- 187 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-----VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATD- 187 (377)
T ss_pred CCCeEEEEEcccCCchhHH-----HHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC-
Confidence 4677999999843322111 1223566666664 334444332111 1 1223345667788888776
Q ss_pred cCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccccc--CCCceeEEEEecccccC
Q 042745 150 NGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREIL--DGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 150 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~--~~~~i~~~i~~~p~~~~ 208 (331)
-..++|.|++||||.+++...+.+...++. -...|+-+|+-+|=.+.
T Consensus 188 ------------~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 188 ------------KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred ------------CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 335899999999999999988776644321 13478889998887654
No 178
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.47 E-value=0.00041 Score=58.44 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=48.4
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHh---cC-CeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVS---AC-NVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPED 156 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~---~~-G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~ 156 (331)
+.=+||++|| ..|+..+ +..+...+.. +. +..++..-|......+....-.-....++++........
T Consensus 3 ~~hLvV~vHG---L~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~--- 74 (217)
T PF05057_consen 3 PVHLVVFVHG---LWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYE--- 74 (217)
T ss_pred CCEEEEEeCC---CCCCHHH--HHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccc---
Confidence 4568999999 5566543 2222223322 11 122222222222222222222233455666666543322
Q ss_pred cccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 157 WLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 157 ~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
....+|.++|||+||.++-.+.....
T Consensus 75 -----~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 75 -----SKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred -----cccccceEEEecccHHHHHHHHHHhh
Confidence 22368999999999999976665443
No 179
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.16 E-value=0.0054 Score=51.69 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=56.9
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHH----HHHHHHHHHHhccCCCCCcccc
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDD----SWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d----~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
.||.+=||.|+...+ ...|..+++.++.+ ||+|++.-|...= +......+ ...+++.|.+...
T Consensus 18 gvihFiGGaf~ga~P-~itYr~lLe~La~~-Gy~ViAtPy~~tf--DH~~~A~~~~~~f~~~~~~L~~~~~--------- 84 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAP-QITYRYLLERLADR-GYAVIATPYVVTF--DHQAIAREVWERFERCLRALQKRGG--------- 84 (250)
T ss_pred EEEEEcCcceeccCc-HHHHHHHHHHHHhC-CcEEEEEecCCCC--cHHHHHHHHHHHHHHHHHHHHHhcC---------
Confidence 677777878764443 33578888888865 9999999886542 22223333 3344444444321
Q ss_pred ccCCC--CeEEEeeCCchHHHHHHHHHhhc
Q 042745 160 RYADF--QRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 160 ~~~d~--~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+. -.++=+|||+|+-+-+.+.....
T Consensus 85 --~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 85 --LDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred --CCcccCCeeeeecccchHHHHHHhhhcc
Confidence 222 25677999999999888876654
No 180
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.07 E-value=0.004 Score=57.82 Aligned_cols=67 Identities=10% Similarity=0.091 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccccc----CCCceeEEEEecccccC
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREIL----DGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~----~~~~i~~~i~~~p~~~~ 208 (331)
-+++.+.+++|+.-..++. .....++.|.|.|+||..+-.+|.+.-+... ....++|+++.+|+++.
T Consensus 113 ~~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 113 DQAAEDLYEFLQQFFQKFP-------EYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSG-------GGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hHHHHHHHHHHHHhhhhhh-------hccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 4455555555555443322 2455689999999999998877766443321 24589999999998753
No 181
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.98 E-value=0.0026 Score=58.57 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=58.6
Q ss_pred hHHHHHHHHhcCCeEE-----EE-ecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchH
Q 042745 103 YHSYLNALVSACNVVA-----VS-VDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGA 176 (331)
Q Consensus 103 ~~~~~~~la~~~G~~v-----v~-~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 176 (331)
|..++..|. +.||.. .+ +|.|+++. ........+...++.+... +.++|.|+||||||
T Consensus 67 ~~~li~~L~-~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~--------------~~~kv~li~HSmGg 130 (389)
T PF02450_consen 67 FAKLIENLE-KLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKK--------------NGKKVVLIAHSMGG 130 (389)
T ss_pred HHHHHHHHH-hcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHh--------------cCCcEEEEEeCCCc
Confidence 667777775 446532 33 79999876 2223344455555554442 24899999999999
Q ss_pred HHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 177 NIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 177 ~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
.+++.++............|+++|.+++.+..
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 99999888775431001269999999865543
No 182
>PF03283 PAE: Pectinacetylesterase
Probab=96.96 E-value=0.0079 Score=54.54 Aligned_cols=41 Identities=20% Similarity=-0.023 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
..-+.+++++|..+.- -++++|+|.|.|+||.-|+.-+-..
T Consensus 137 ~~i~~avl~~l~~~gl-----------~~a~~vlltG~SAGG~g~~~~~d~~ 177 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGL-----------PNAKQVLLTGCSAGGLGAILHADYV 177 (361)
T ss_pred HHHHHHHHHHHHHhcC-----------cccceEEEeccChHHHHHHHHHHHH
Confidence 4567789999988711 5679999999999999998755443
No 183
>PLN02606 palmitoyl-protein thioesterase
Probab=96.92 E-value=0.072 Score=46.60 Aligned_cols=39 Identities=13% Similarity=-0.055 Sum_probs=30.9
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccccc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFW 207 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~ 207 (331)
+-+-++|+|.||.++-.++.+.++ .+.++-+|.+++.-.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~----~p~V~nlISlggph~ 133 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDN----APPVINYVSLGGPHA 133 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCC----CCCcceEEEecCCcC
Confidence 358899999999999999998864 136888888865443
No 184
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.90 E-value=0.0033 Score=56.60 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=63.5
Q ss_pred cEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeE---EEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 83 PLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVV---AVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 83 p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~---vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
-.++++||.++..+. +... .....+.|+. +..+++... ...............++.+....
T Consensus 60 ~pivlVhG~~~~~~~-----~~~~-~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~-------- 123 (336)
T COG1075 60 EPIVLVHGLGGGYGN-----FLPL-DYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAK-------- 123 (336)
T ss_pred ceEEEEccCcCCcch-----hhhh-hhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhh--------
Confidence 378999996543333 2222 2223455665 666666633 11222334444555565555443
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
...++|.|+||||||.++..++...+.. ..++.++.+++.-..
T Consensus 124 --~ga~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~tp~~G 166 (336)
T COG1075 124 --TGAKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGTPHHG 166 (336)
T ss_pred --cCCCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEeccCCCC
Confidence 2347899999999999999888777642 268888888765433
No 185
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.87 E-value=0.007 Score=64.62 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=62.6
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-CCCChHHHHHHHH-HHHHHhccCCCCCcccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-PVPCAHDDSWAAI-KWVASHVNGSGPEDWLN 159 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~ 159 (331)
.|.++++||.|. +.. .|..+...+. .++.|+.++.++.... .....++++.+.+ ..+...
T Consensus 1068 ~~~l~~lh~~~g---~~~--~~~~l~~~l~--~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~----------- 1129 (1296)
T PRK10252 1068 GPTLFCFHPASG---FAW--QFSVLSRYLD--PQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ----------- 1129 (1296)
T ss_pred CCCeEEecCCCC---chH--HHHHHHHhcC--CCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh-----------
Confidence 467999999653 222 2555555442 3688899998876432 1223444443332 333321
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
....++.++|||+||.+|..+|.+..... ..+..++++.++
T Consensus 1130 --~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~---~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1130 --QPHGPYHLLGYSLGGTLAQGIAARLRARG---EEVAFLGLLDTW 1170 (1296)
T ss_pred --CCCCCEEEEEechhhHHHHHHHHHHHHcC---CceeEEEEecCC
Confidence 11247999999999999999998764432 268888877653
No 186
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.79 E-value=0.0047 Score=59.66 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=38.4
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 130 PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 130 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
...++.+-+.+|++++.+...+.. ++ +.-.|..|+|+||||||.+|..++...+
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~--e~--~~p~P~sVILVGHSMGGiVAra~~tlkn 204 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGER--EY--ASPLPHSVILVGHSMGGIVARATLTLKN 204 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhccc--cc--CCCCCceEEEEeccchhHHHHHHHhhhh
Confidence 445667788889999888765410 00 0123788999999999999988877653
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.63 E-value=0.0084 Score=47.39 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=29.9
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
...+|.|.|||+||.+|..++....... ......++.+.+..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCc
Confidence 4589999999999999999998875421 01345566665444
No 188
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.63 E-value=0.0043 Score=52.36 Aligned_cols=52 Identities=15% Similarity=0.239 Sum_probs=36.3
Q ss_pred HHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec
Q 042745 139 WAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH 203 (331)
Q Consensus 139 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~ 203 (331)
..|++|+......+ +.+|.|.|||.||++|..++........ .+|..++.+.
T Consensus 69 ~~A~~yl~~~~~~~-----------~~~i~v~GHSkGGnLA~yaa~~~~~~~~--~rI~~vy~fD 120 (224)
T PF11187_consen 69 KSALAYLKKIAKKY-----------PGKIYVTGHSKGGNLAQYAAANCDDEIQ--DRISKVYSFD 120 (224)
T ss_pred HHHHHHHHHHHHhC-----------CCCEEEEEechhhHHHHHHHHHccHHHh--hheeEEEEee
Confidence 45667776665422 2469999999999999998887543221 2688888764
No 189
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.62 E-value=0.089 Score=47.45 Aligned_cols=79 Identities=25% Similarity=0.237 Sum_probs=49.8
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC-CCC-CCCCCCChHHHHHHHHHHHHHhccCCCCCcccccc
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY-RRA-PENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRY 161 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy-r~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 161 (331)
.|+|.--|||-.- .......+ .+.|+.|+.+|- |.. .+.+-.....|+...+++...+
T Consensus 263 av~~SGDGGWr~l------Dk~v~~~l-~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~------------- 322 (456)
T COG3946 263 AVFYSGDGGWRDL------DKEVAEAL-QKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR------------- 322 (456)
T ss_pred EEEEecCCchhhh------hHHHHHHH-HHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh-------------
Confidence 3444444666421 23444555 566999999992 322 2233344567888888887765
Q ss_pred CCCCeEEEeeCCchHHHHHHH
Q 042745 162 ADFQRVFFAGDSAGANIAHHM 182 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~ 182 (331)
-...|+.|+|+|+|+-+--..
T Consensus 323 w~~~~~~liGySfGADvlP~~ 343 (456)
T COG3946 323 WGAKRVLLIGYSFGADVLPFA 343 (456)
T ss_pred hCcceEEEEeecccchhhHHH
Confidence 346899999999999665433
No 190
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.49 E-value=0.011 Score=45.69 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=22.5
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhccc
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNGRE 189 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~~~ 189 (331)
..+|.+.|||+||.+|..++......
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~ 88 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASH 88 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHC
T ss_pred CccchhhccchHHHHHHHHHHhhhhc
Confidence 47999999999999999998876543
No 191
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.49 E-value=0.0095 Score=53.57 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=66.5
Q ss_pred HHHHHHHhcCCeEEEEecCCCCCCC-----------------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeE
Q 042745 105 SYLNALVSACNVVAVSVDYRRAPEN-----------------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRV 167 (331)
Q Consensus 105 ~~~~~la~~~G~~vv~~dyr~~~~~-----------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i 167 (331)
.++-.+|.+.+..+|.++.|..++. +-++.+.|....+.+|+.... .....|
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~-----------a~~~pv 169 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS-----------AEASPV 169 (492)
T ss_pred chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc-----------cccCcE
Confidence 5667788888999999999976542 122355677778888877643 455789
Q ss_pred EEeeCCchHHHHHHHHHhhcccccCCCceeEEEE-ecccccCCCCCC
Q 042745 168 FFAGDSAGANIAHHMGIRNGREILDGFNVAGIVL-VHPYFWGSTPVG 213 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~-~~p~~~~~~~~~ 213 (331)
+.+|.|.||++|+.+=++++. .+.|.+. -+|++...+..+
T Consensus 170 IafGGSYGGMLaAWfRlKYPH------iv~GAlAaSAPvl~f~d~vp 210 (492)
T KOG2183|consen 170 IAFGGSYGGMLAAWFRLKYPH------IVLGALAASAPVLYFEDTVP 210 (492)
T ss_pred EEecCchhhHHHHHHHhcChh------hhhhhhhccCceEeecCCCC
Confidence 999999999999999999875 4555444 457666555443
No 192
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.46 E-value=0.37 Score=44.74 Aligned_cols=104 Identities=19% Similarity=0.178 Sum_probs=64.6
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeE-EEEecCCCCCCCCC--CChHHHHHHHHHHHHHhccCCCCCcc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVV-AVSVDYRRAPENPV--PCAHDDSWAAIKWVASHVNGSGPEDW 157 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~-vv~~dyr~~~~~~~--~~~~~d~~~~~~~l~~~~~~~~~~~~ 157 (331)
+-|+.||+-|- +.. +++-.+ .+.++.|+- .+.-|-|+-+.+-+ ....+. ..++-+.+..+.+|
T Consensus 288 KPPL~VYFSGy---R~a---EGFEgy--~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~--~I~~~I~~~L~~Lg---- 353 (511)
T TIGR03712 288 KPPLNVYFSGY---RPA---EGFEGY--FMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQ--GIINVIQEKLDYLG---- 353 (511)
T ss_pred CCCeEEeeccC---ccc---CcchhH--HHHHhcCCCeEEeeccccccceeeeCcHHHHH--HHHHHHHHHHHHhC----
Confidence 56899999872 221 122221 223455653 35567776654322 222221 22333333344444
Q ss_pred ccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccCCC
Q 042745 158 LNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWGST 210 (331)
Q Consensus 158 ~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~~~ 210 (331)
.+.+.++|.|-|||.+-|+.++++. .+.++|+--|..+...
T Consensus 354 ----F~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLGt 394 (511)
T TIGR03712 354 ----FDHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLGT 394 (511)
T ss_pred ----CCHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchhh
Confidence 8999999999999999999999887 6888888888776543
No 193
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.38 E-value=0.0098 Score=49.11 Aligned_cols=60 Identities=18% Similarity=0.155 Sum_probs=45.1
Q ss_pred CeEEEEecCCCCCCC------------CCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHH
Q 042745 115 NVVAVSVDYRRAPEN------------PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHM 182 (331)
Q Consensus 115 G~~vv~~dyr~~~~~------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~ 182 (331)
-..|.+|-||-..-. .+.....|+.+|+++..++. -+...|+|.|||.|+.+.+.+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~------------n~GRPfILaGHSQGs~~l~~L 112 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY------------NNGRPFILAGHSQGSMHLLRL 112 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc------------CCCCCEEEEEeChHHHHHHHH
Confidence 368899999954221 12235689999999988873 233579999999999999998
Q ss_pred HHhh
Q 042745 183 GIRN 186 (331)
Q Consensus 183 a~~~ 186 (331)
+.+.
T Consensus 113 L~e~ 116 (207)
T PF11288_consen 113 LKEE 116 (207)
T ss_pred HHHH
Confidence 8764
No 194
>PLN02209 serine carboxypeptidase
Probab=96.26 E-value=0.077 Score=49.52 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccc----cCCCceeEEEEecccccC
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREI----LDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~----~~~~~i~~~i~~~p~~~~ 208 (331)
+++.+.+++|+.-...+. ......+.|+|+|.||+.+-.+|.+..+.. .+...++|+++.+|+.+.
T Consensus 145 ~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHP-------QFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHHHhCc-------cccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 444555555554433221 134467999999999998877776543211 123478999999998764
No 195
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.20 E-value=0.11 Score=48.55 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=34.8
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccc----cCCCceeEEEEecccccCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREI----LDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~----~~~~~i~~~i~~~p~~~~~ 209 (331)
+...++.|.|+|.||..+-.+|.+..+.. .....++|+++-+|+.+..
T Consensus 162 ~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 162 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred hcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 34577999999999998887776643211 1234789999999987653
No 196
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.12 E-value=0.13 Score=47.97 Aligned_cols=48 Identities=10% Similarity=0.053 Sum_probs=35.6
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccc----cCCCceeEEEEecccccCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREI----LDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~----~~~~~i~~~i~~~p~~~~~ 209 (331)
+..+.+.|.|.|.+|+.+-.+|.+.-... .+...++|+++-+|+++..
T Consensus 165 y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 165 YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcc
Confidence 55688999999999988877776543321 2235899999999987654
No 197
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.07 E-value=0.02 Score=48.55 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=28.9
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
...+|.+.|||+||.+|..++....... ....+..+..-+|-.
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 3478999999999999999888765321 112455554445444
No 198
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.97 E-value=0.047 Score=44.41 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=29.6
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHh--hcccccCCCceeEEEEec
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIR--NGREILDGFNVAGIVLVH 203 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~--~~~~~~~~~~i~~~i~~~ 203 (331)
....+|+|.|+|.|+.++..++.. ..... ..+|.+++++.
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~--~~~I~avvlfG 119 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPDV--ADRIAAVVLFG 119 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHHH--HHHEEEEEEES
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChhh--hhhEEEEEEec
Confidence 445799999999999999998876 11111 12799999885
No 199
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.95 E-value=0.068 Score=49.65 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=46.1
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccccC
Q 042745 132 PCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYFWG 208 (331)
Q Consensus 132 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~~~ 208 (331)
...-+|+....+.+.+...++. -..++.+|+|.|.||+-+..+|....++.. ..++++++++++..
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~--------r~~~~~~L~GESYgg~yip~~A~~L~~~~~---~~~~~~nlssvlig 238 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYA--------RLLSPKFLAGESYGGHYIPVFAHELLEDNI---ALNGNVNLSSVLIG 238 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHh--------hhcCceeEeeccccchhhHHHHHHHHHhcc---ccCCceEeeeeeec
Confidence 3445788888888777665443 334689999999999999988877655422 46666666665543
No 200
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.77 E-value=0.031 Score=40.92 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=39.6
Q ss_pred CeEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 260 ARVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+|+|++.++.|+..+ .++.++++|. +.+++..++.+|+.... ...+ +.+.+.+||...
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~------~s~lvt~~g~gHg~~~~--~s~C---~~~~v~~yl~~G 94 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLP------GSRLVTVDGAGHGVYAG--GSPC---VDKAVDDYLLDG 94 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCC------CceEEEEeccCcceecC--CChH---HHHHHHHHHHcC
Confidence 399999999999997 4445544443 35789999999997731 1233 344555677653
No 201
>PLN02454 triacylglycerol lipase
Probab=95.77 E-value=0.028 Score=51.33 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=20.0
Q ss_pred eEEEeeCCchHHHHHHHHHhhcc
Q 042745 166 RVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 166 ~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
+|.|.|||+||.+|+.+|.....
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~ 251 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVE 251 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHH
Confidence 59999999999999999876543
No 202
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.33 E-value=0.11 Score=42.68 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=50.8
Q ss_pred hHHHHHHHHhcCCeEEEEecCCCCCCC-CCCChHHHHHH-HHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHH
Q 042745 103 YHSYLNALVSACNVVAVSVDYRRAPEN-PVPCAHDDSWA-AIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAH 180 (331)
Q Consensus 103 ~~~~~~~la~~~G~~vv~~dyr~~~~~-~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al 180 (331)
|..+...+. . .+.|+.+++++.... .....+++... ..+.+... ....++.++|||+||.+|.
T Consensus 15 ~~~~~~~l~-~-~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 15 YARLAAALR-G-RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-------------AGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred HHHHHHhcC-C-CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------------cCCCCeEEEEECHHHHHHH
Confidence 445555543 2 578888887765332 22333443332 33333332 2235789999999999999
Q ss_pred HHHHhhcccccCCCceeEEEEecc
Q 042745 181 HMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 181 ~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
.++.+....+ ..+.+++++.+
T Consensus 80 ~~a~~l~~~~---~~~~~l~~~~~ 100 (212)
T smart00824 80 AVAARLEARG---IPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHhCC---CCCcEEEEEcc
Confidence 9988765432 25777776654
No 203
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.02 E-value=0.082 Score=50.34 Aligned_cols=90 Identities=11% Similarity=0.042 Sum_probs=54.0
Q ss_pred hHHHHHHHHhcCCeE-----EEEecCCCCCCCC--CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCch
Q 042745 103 YHSYLNALVSACNVV-----AVSVDYRRAPENP--VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAG 175 (331)
Q Consensus 103 ~~~~~~~la~~~G~~-----vv~~dyr~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 175 (331)
|..++..|+ +.||. ...+|+|+++... ....+..+...++.+... -..++|+|+|||||
T Consensus 158 w~kLIe~L~-~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~-------------nggkKVVLV~HSMG 223 (642)
T PLN02517 158 WAVLIANLA-RIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT-------------NGGKKVVVVPHSMG 223 (642)
T ss_pred HHHHHHHHH-HcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH-------------cCCCeEEEEEeCCc
Confidence 346666665 45763 3446778774322 123345555566655443 12478999999999
Q ss_pred HHHHHHHHHhhccc---------ccCCCceeEEEEecccc
Q 042745 176 ANIAHHMGIRNGRE---------ILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 176 G~~Al~~a~~~~~~---------~~~~~~i~~~i~~~p~~ 206 (331)
|.+++.++...... ..-..-|+..|.++|.+
T Consensus 224 glv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 224 VLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 99999877642210 00012578888887654
No 204
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=94.99 E-value=0.35 Score=41.30 Aligned_cols=102 Identities=13% Similarity=0.014 Sum_probs=57.3
Q ss_pred ccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCC-CCChHHHHHHHHHHHHHhccCCCCCccccc
Q 042745 82 LPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENP-VPCAHDDSWAAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 82 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 160 (331)
.| +|++||=|-...+. ....+.+.+-...|..|.+.+.--.-+.. +.-..+.+..+=+.+... .+
T Consensus 24 ~P-~ii~HGigd~c~~~---~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m-~~--------- 89 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSL---SMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQM-PE--------- 89 (296)
T ss_pred CC-EEEEeccCcccccc---hHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcc-hh---------
Confidence 44 66689944332221 13444444444458888888755331122 222223333333333322 11
Q ss_pred cCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 161 YADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
-++-+.++|.|.||.+|-.++....+ +.++-.|++++
T Consensus 90 --lsqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~g 126 (296)
T KOG2541|consen 90 --LSQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGG 126 (296)
T ss_pred --ccCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccC
Confidence 13568899999999999999887764 36777777653
No 205
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.63 E-value=0.47 Score=41.69 Aligned_cols=105 Identities=12% Similarity=0.048 Sum_probs=57.2
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhc-CCeEEEEecCCCCCCCCC-CChHHHHHHHHHHHHHhccCCCCCccc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSA-CNVVAVSVDYRRAPENPV-PCAHDDSWAAIKWVASHVNGSGPEDWL 158 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~-~G~~vv~~dyr~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~ 158 (331)
+.| +|+.||=|-...+.. ... +.+++.. .|..+.++.........+ -...+++..+-+.|.... +
T Consensus 25 ~~P-~ViwHG~GD~c~~~g---~~~-~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~-~------- 91 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDAT---NAN-FTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMK-E------- 91 (314)
T ss_pred CCC-eEEecCCCcccCCch---HHH-HHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhch-h-------
Confidence 344 667899554433332 233 3344433 355555544332222222 222233333334443321 1
Q ss_pred cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 159 NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 159 ~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
. .+-+-++|+|.||.++-.++.+.++. +.++-+|.+++.-
T Consensus 92 ---l-~~G~naIGfSQGGlflRa~ierc~~~----p~V~nlISlggph 131 (314)
T PLN02633 92 ---L-SQGYNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLAGPH 131 (314)
T ss_pred ---h-hCcEEEEEEccchHHHHHHHHHCCCC----CCcceEEEecCCC
Confidence 1 13588999999999999999988751 3688888876543
No 206
>PLN02408 phospholipase A1
Probab=94.32 E-value=0.13 Score=46.40 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=20.7
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
.+|.|.|||+||.+|..+|.....
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 469999999999999998877654
No 207
>PLN02571 triacylglycerol lipase
Probab=94.13 E-value=0.15 Score=46.82 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=19.6
Q ss_pred eEEEeeCCchHHHHHHHHHhhc
Q 042745 166 RVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 166 ~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
+|.|.|||+||.+|+..|....
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHH
Confidence 6999999999999999887654
No 208
>PLN00413 triacylglycerol lipase
Probab=93.79 E-value=0.12 Score=47.94 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=20.1
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHh
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~ 185 (331)
....+|.|.|||+||.+|..++..
T Consensus 281 ~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 281 NPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCCCeEEEEecCHHHHHHHHHHHH
Confidence 334689999999999999988764
No 209
>PLN02802 triacylglycerol lipase
Probab=93.46 E-value=0.21 Score=46.70 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=20.6
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
-+|.|.|||+||.+|...|.....
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 379999999999999998876644
No 210
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.38 E-value=0.19 Score=43.18 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=22.7
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
+...+|.|.|||.||.+|..+..+..
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 44579999999999999999998874
No 211
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.38 E-value=0.19 Score=43.18 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=22.7
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
+...+|.|.|||.||.+|..+..+..
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 44579999999999999999998874
No 212
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=93.36 E-value=0.45 Score=41.29 Aligned_cols=37 Identities=14% Similarity=-0.027 Sum_probs=27.7
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
+-+-++|+|.||.++-.++.+.++ +.++-+|++++.-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecCcc
Confidence 458899999999999999999864 3799999886543
No 213
>PLN02934 triacylglycerol lipase
Probab=93.31 E-value=0.16 Score=47.47 Aligned_cols=25 Identities=16% Similarity=0.139 Sum_probs=20.6
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
....+|.+.|||+||.+|..++...
T Consensus 318 ~p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 318 HKNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCCeEEEeccccHHHHHHHHHHHH
Confidence 3346899999999999999887543
No 214
>PLN02162 triacylglycerol lipase
Probab=93.14 E-value=0.19 Score=46.62 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=19.5
Q ss_pred CCeEEEeeCCchHHHHHHHHHhh
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
..++.+.|||+||.+|..++...
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHH
Confidence 46899999999999999876643
No 215
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.04 E-value=0.93 Score=42.24 Aligned_cols=120 Identities=15% Similarity=0.112 Sum_probs=75.3
Q ss_pred eEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-C-----------
Q 042745 63 LSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-P----------- 130 (331)
Q Consensus 63 ~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-~----------- 130 (331)
..=+.|.+... .....|+-|+|-|=|- .+...-.........+|++.|..|+..++|..+.. +
T Consensus 71 ~Qq~~y~n~~~----~~~~gPiFLmIGGEgp-~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~ 145 (514)
T KOG2182|consen 71 FQQRFYNNNQW----AKPGGPIFLMIGGEGP-ESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKY 145 (514)
T ss_pred hhhheeecccc----ccCCCceEEEEcCCCC-CCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhh
Confidence 33356666655 1345677777776443 22111111223456788899999999999966521 1
Q ss_pred --CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec
Q 042745 131 --VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH 203 (331)
Q Consensus 131 --~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~ 203 (331)
....+.|+...++.+..... .-+..+.+.+|.|.-|.+++++=.++++ .+.|.|.-|
T Consensus 146 LSs~QALaDla~fI~~~n~k~n----------~~~~~~WitFGgSYsGsLsAW~R~~yPe------l~~GsvASS 204 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFN----------FSDDSKWITFGGSYSGSLSAWFREKYPE------LTVGSVASS 204 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcC----------CCCCCCeEEECCCchhHHHHHHHHhCch------hheeecccc
Confidence 12345676666666655432 1234589999999999999999998886 555555544
No 216
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.49 E-value=0.4 Score=43.23 Aligned_cols=42 Identities=12% Similarity=0.093 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccc
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREI 190 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~ 190 (331)
..+.+.++-|... ...-+|.+.|||+||.+|...|......+
T Consensus 155 ~~~~~~~~~L~~~-------------~~~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 155 SGLDAELRRLIEL-------------YPNYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHHh-------------cCCcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 4555666666665 33468999999999999999988765443
No 217
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.41 E-value=3.2 Score=35.61 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=34.9
Q ss_pred eEEEEEeCCCccch-hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 261 RVLVFVAEKDKLAA-RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 261 Pvli~~G~~D~~v~-~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
=+.++.+++|..++ ++.. .|++.=. .+++...+ .+|.-.+.. ....+.++|.+-|++.
T Consensus 308 l~ivv~A~~D~Yipr~gv~---~lQ~~WP--g~eVr~~e-gGHVsayl~----k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 308 LIIVVQAKEDAYIPRTGVR---SLQEIWP--GCEVRYLE-GGHVSAYLF----KQDLFRRAIVDGLDRL 366 (371)
T ss_pred eEEEEEecCCccccccCcH---HHHHhCC--CCEEEEee-cCceeeeeh----hchHHHHHHHHHHHhh
Confidence 46778889998887 3322 3344322 45666556 589765432 2356777777777654
No 218
>PLN02324 triacylglycerol lipase
Probab=92.32 E-value=0.24 Score=45.31 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=19.4
Q ss_pred CeEEEeeCCchHHHHHHHHHhh
Q 042745 165 QRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
-+|.|.|||+||.+|...|...
T Consensus 215 ~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 3799999999999999988754
No 219
>PLN02753 triacylglycerol lipase
Probab=92.30 E-value=0.26 Score=46.30 Aligned_cols=24 Identities=17% Similarity=0.099 Sum_probs=20.5
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhc
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.-+|.|.|||+||.+|+..|....
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla 334 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIA 334 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHH
Confidence 358999999999999999886554
No 220
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.03 E-value=1.1 Score=37.75 Aligned_cols=63 Identities=21% Similarity=0.101 Sum_probs=40.3
Q ss_pred CeEEEEecCCCC-------CCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 115 NVVAVSVDYRRA-------PENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 115 G~~vv~~dyr~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
|+.+..++|..+ +..++...+.+..+.+.-...... ...+++.|+|+|+|+.+|...+.+..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~-----------~~~~~vvV~GySQGA~Va~~~~~~l~ 70 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAI-----------AAGGPVVVFGYSQGAVVASNVLRRLA 70 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhc-----------cCCCCEEEEEECHHHHHHHHHHHHHH
Confidence 566777777742 233445555555444444433311 24478999999999999998887765
Q ss_pred c
Q 042745 188 R 188 (331)
Q Consensus 188 ~ 188 (331)
.
T Consensus 71 ~ 71 (225)
T PF08237_consen 71 A 71 (225)
T ss_pred h
Confidence 4
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.88 E-value=0.34 Score=45.56 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=19.7
Q ss_pred CeEEEeeCCchHHHHHHHHHhhc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+|.|.|||+||.+|+..|....
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHH
Confidence 47999999999999998886543
No 222
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=91.63 E-value=3.5 Score=36.37 Aligned_cols=41 Identities=15% Similarity=0.044 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+.+..|++||..+. -..++|+++|+|-|++.|-.+|....
T Consensus 104 ~~nI~~AYrFL~~~y------------epGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 104 VQNIREAYRFLIFNY------------EPGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHHHHHHHhc------------CCCCeEEEeeccchhHHHHHHHHHHH
Confidence 368889999999884 23489999999999999988887653
No 223
>PLN02719 triacylglycerol lipase
Probab=91.49 E-value=0.36 Score=45.26 Aligned_cols=24 Identities=17% Similarity=0.178 Sum_probs=20.5
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
.+|.|.|||+||.+|...|.....
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHH
Confidence 489999999999999998876543
No 224
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=91.31 E-value=0.51 Score=43.64 Aligned_cols=72 Identities=14% Similarity=0.056 Sum_probs=43.1
Q ss_pred hHHHHHHHHhcCCeE------EEEecCCCCCCCC--CCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCc
Q 042745 103 YHSYLNALVSACNVV------AVSVDYRRAPENP--VPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSA 174 (331)
Q Consensus 103 ~~~~~~~la~~~G~~------vv~~dyr~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 174 (331)
|..++..++ ..||. -..+|+|++.... ....+..+..-++..-+. -..++|+|++|||
T Consensus 126 w~~~i~~lv-~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~-------------~G~kkVvlisHSM 191 (473)
T KOG2369|consen 126 WHELIENLV-GIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKL-------------NGGKKVVLISHSM 191 (473)
T ss_pred HHHHHHHHH-hhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHH-------------cCCCceEEEecCC
Confidence 345555554 45665 3557888865221 112223333333333332 2238999999999
Q ss_pred hHHHHHHHHHhhcc
Q 042745 175 GANIAHHMGIRNGR 188 (331)
Q Consensus 175 GG~~Al~~a~~~~~ 188 (331)
||.+.+..+....+
T Consensus 192 G~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 192 GGLYVLYFLKWVEA 205 (473)
T ss_pred ccHHHHHHHhcccc
Confidence 99999999877766
No 225
>PLN02310 triacylglycerol lipase
Probab=91.26 E-value=0.27 Score=44.95 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=19.8
Q ss_pred CeEEEeeCCchHHHHHHHHHhhc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+|.|.|||+||.+|+..|....
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH
Confidence 47999999999999998886543
No 226
>PLN02761 lipase class 3 family protein
Probab=91.21 E-value=0.35 Score=45.47 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=19.8
Q ss_pred CeEEEeeCCchHHHHHHHHHhhc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+|.+.|||+||.+|...|....
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 47999999999999998886543
No 227
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=91.07 E-value=1.2 Score=37.17 Aligned_cols=33 Identities=9% Similarity=0.070 Sum_probs=24.4
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEeccc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPY 205 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~ 205 (331)
++|.|+++|||=+.|..+.... .++..+.+++=
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--------~~~~aiAINGT 89 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--------PFKRAIAINGT 89 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--------CcceeEEEECC
Confidence 7899999999999998876543 35555666543
No 228
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=90.31 E-value=1.2 Score=42.58 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=51.0
Q ss_pred CeEEEEEeCCCccch---hHHHHHHHHHhc-CCCcceEEEEeCCCceeeeec---------CCCcHHHHHHHHHHHHHhh
Q 042745 260 ARVLVFVAEKDKLAA---RGWLYYEKLKES-GWKGRAEIVETKGESHVFHLF---------NPNSENARVMLQQIASFFN 326 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~---~~~~~~~~l~~~-g~~~~~~~~~~~g~~H~~~~~---------~~~~~~~~~~~~~i~~fl~ 326 (331)
.|++|+||..|.++| .++.|....+.. |......++++.++.|.-.+. -|......+.++.|.++|+
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~ 635 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHLK 635 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHhh
Confidence 599999999999997 567777766543 321257888899999954321 2445678899999999998
Q ss_pred cc
Q 042745 327 LQ 328 (331)
Q Consensus 327 ~~ 328 (331)
..
T Consensus 636 ~G 637 (690)
T PF10605_consen 636 SG 637 (690)
T ss_pred cC
Confidence 64
No 229
>PLN02847 triacylglycerol lipase
Probab=89.97 E-value=0.65 Score=44.41 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=20.2
Q ss_pred CeEEEeeCCchHHHHHHHHHhhc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
-+|.|.|||+||.+|..++....
T Consensus 251 YkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHh
Confidence 58999999999999998887654
No 230
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.17 E-value=3.4 Score=36.98 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=35.4
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcccc----cCCCceeEEEEecccccCC
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGREI----LDGFNVAGIVLVHPYFWGS 209 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~~~----~~~~~i~~~i~~~p~~~~~ 209 (331)
+......|.|.|.||+.+-.+|.+..+.. .+...++|+++-+|+.+..
T Consensus 48 ~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 48 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 45578999999999998888777653221 1234799999999987653
No 231
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=86.87 E-value=4.3 Score=36.57 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
-+..+++-.+++..+ +..+++.|.|-|=-|+.+...|...+
T Consensus 216 a~srAMdlAq~eL~q----------~~Ik~F~VTGaSKRgWttwLTAIaDp 256 (507)
T COG4287 216 AVSRAMDLAQDELEQ----------VEIKGFMVTGASKRGWTTWLTAIADP 256 (507)
T ss_pred HHHHHHHHHHhhhhh----------eeeeeEEEeccccchHHHHHHHhcCc
Confidence 344555555555432 45688999999999999999988775
No 232
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.30 E-value=25 Score=31.78 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=49.4
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhccC
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQD 329 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 329 (331)
+.+.+.+..|.+++ +.+.+.+..++.|. +++..-+.+..|.-+... ......+.+.+|++...
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~--~v~s~~~~ds~H~~h~r~----~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGV--NVKSVKFKDSEHVAHFRS----FPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCc--eEEEeeccCccceeeecc----CcHHHHHHHHHHHHhcc
Confidence 67777788998886 77888888999988 899999999999865433 23678888888888653
No 233
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=85.27 E-value=5.1 Score=32.46 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=27.9
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe-cccc
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV-HPYF 206 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~-~p~~ 206 (331)
...++.++|||+|..++-..+.... ..+.-++++ ||-+
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~~~------~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQGG------LRVDDVVLVGSPGM 145 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhhCC------CCcccEEEECCCCC
Confidence 4468999999999999988877622 257777766 4544
No 234
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.42 E-value=7.6 Score=33.78 Aligned_cols=103 Identities=19% Similarity=0.135 Sum_probs=57.1
Q ss_pred EcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC-----CCCChHHHHHHHHHHHHHhccCCCCCccccccC
Q 042745 88 IHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN-----PVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYA 162 (331)
Q Consensus 88 ~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 162 (331)
--|.||+.... ..-++.+. ...+++++..|...|.- .-....+-..+.++-+......+- .-
T Consensus 40 pTGtGWVdp~a-----~~a~E~l~-~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP-------~~ 106 (289)
T PF10081_consen 40 PTGTGWVDPWA-----VDALEYLY-GGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLP-------ED 106 (289)
T ss_pred CCCCCccCHHH-----HhHHHHHh-CCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCC-------cc
Confidence 34667764332 23344444 43689999999876641 122233333444444444332221 02
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
+.-|++|+|.|.|++-+........+.. ..+.|++...|-.
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~---~~vdGalw~GpP~ 147 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLR---DRVDGALWVGPPF 147 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhh---hhcceEEEeCCCC
Confidence 3458999999999987765443322211 1688888876544
No 235
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=82.16 E-value=2.6 Score=36.93 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 134 AHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 134 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
.-..+..++.+|.++. -..++|.|+|+|-|+.+|-.++-....
T Consensus 73 ~~~~I~~ay~~l~~~~------------~~gd~I~lfGFSRGA~~AR~~a~~i~~ 115 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNY------------EPGDRIYLFGFSRGAYTARAFANMIDK 115 (277)
T ss_pred hHHHHHHHHHHHHhcc------------CCcceEEEEecCccHHHHHHHHHHHhh
Confidence 3457778899987764 344789999999999999988866543
No 236
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=79.86 E-value=6.1 Score=25.88 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=18.2
Q ss_pred CcccceeeecCCCCCCCCceEEEEeecCCCC-CCCCCCCccEEEEEcC
Q 042745 44 NVDSKDVVYSPQNSNNSNALSARLYLPKGTN-NNNNNNKLPLLVYIHG 90 (331)
Q Consensus 44 ~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~~p~vv~~HG 90 (331)
+...++..+.+ .+..-+.+++-...+ ..+..+++|+|++.||
T Consensus 9 GY~~E~h~V~T-----~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG 51 (63)
T PF04083_consen 9 GYPCEEHEVTT-----EDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG 51 (63)
T ss_dssp T---EEEEEE------TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--
T ss_pred CCCcEEEEEEe-----CCCcEEEEEEccCCCCCcccCCCCCcEEEECC
Confidence 34456667766 344444444433321 1134578999999998
No 237
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=78.64 E-value=6.2 Score=35.62 Aligned_cols=42 Identities=19% Similarity=0.054 Sum_probs=30.6
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
..+|.|+|||+|+.+...++....+... ...|.-++++....
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~-~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKA-FGLVENVVLMGAPV 260 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccc-cCeEeeEEEecCCC
Confidence 3569999999999999988877655421 12578888876444
No 238
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=76.23 E-value=22 Score=32.29 Aligned_cols=92 Identities=11% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCCccEEEEEcCCcccccCCCCchhHHHHHHHHhc---------CCeEEEEecCCCCCCCCCC--Ch--HHHHHHHHHHH
Q 042745 79 NNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSA---------CNVVAVSVDYRRAPENPVP--CA--HDDSWAAIKWV 145 (331)
Q Consensus 79 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~---------~G~~vv~~dyr~~~~~~~~--~~--~~d~~~~~~~l 145 (331)
.++.-.++++||.. |+-.. +..++. ++.. .-+.|++|...+.+-...+ .. ...+..+++-|
T Consensus 149 ~k~v~PlLl~HGwP---Gsv~E--FykfIP-lLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkL 222 (469)
T KOG2565|consen 149 KKKVKPLLLLHGWP---GSVRE--FYKFIP-LLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKL 222 (469)
T ss_pred CCcccceEEecCCC---chHHH--HHhhhh-hhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHH
Confidence 34555688899733 33222 334333 3322 2378899987765432211 11 22334455555
Q ss_pred HHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccc
Q 042745 146 ASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGRE 189 (331)
Q Consensus 146 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~ 189 (331)
.-+ +..++.+|-|.-+|..++..+|.-+++.
T Consensus 223 MlR-------------Lg~nkffiqGgDwGSiI~snlasLyPen 253 (469)
T KOG2565|consen 223 MLR-------------LGYNKFFIQGGDWGSIIGSNLASLYPEN 253 (469)
T ss_pred HHH-------------hCcceeEeecCchHHHHHHHHHhhcchh
Confidence 444 4568999999999999999999988763
No 239
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=74.35 E-value=3.9 Score=33.42 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=43.3
Q ss_pred CcccCCCCeEEEEEeCCCccchhHHHH-HHHH-HhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 253 SLASMGCARVLVFVAEKDKLAARGWLY-YEKL-KESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 253 ~l~~~~~~Pvli~~G~~D~~v~~~~~~-~~~l-~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
+.+.+...++|-+-|+.|.+...++.. +..| ..... .....++.+|++| +..++. ..-..++.-.|.+|+.+|
T Consensus 128 dp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~-~~k~~~~~~g~GH-YGlF~G-~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 128 DPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPA-DMKRHHLQPGVGH-YGLFNG-SRWREEIYPRIREFIRQH 202 (202)
T ss_pred chHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCH-HHhhhcccCCCCe-eecccc-hhhhhhhhHHHHHHHHhC
Confidence 344455548888999999888632222 2222 22211 0245677889999 554443 233466777888888764
No 240
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=70.53 E-value=24 Score=31.37 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHH----------HHHHHHhcCCeEEEEecCCCCCC-
Q 042745 60 SNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHS----------YLNALVSACNVVAVSVDYRRAPE- 128 (331)
Q Consensus 60 ~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~----------~~~~la~~~G~~vv~~dyr~~~~- 128 (331)
+....-++|+.... ....+|..+++.||....++.-. .|.. --..+.. -..++.+|-+....
T Consensus 13 ~a~~F~wly~~~~~----~ks~~pl~lwlqGgpGaSstG~G-NFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 13 GAHMFWWLYYATAN----VKSERPLALWLQGGPGASSTGFG-NFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGF 85 (414)
T ss_pred CceEEEEEeeeccc----cccCCCeeEEecCCCCCCCcCcc-chhhcCCcccCCCcCCchhhh--hccEEEecCCCcCce
Confidence 55667777776665 23678999999998654433210 0100 0011222 23445555442211
Q ss_pred ------CCCC----ChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhccc---ccCCCc
Q 042745 129 ------NPVP----CAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGRE---ILDGFN 195 (331)
Q Consensus 129 ------~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~---~~~~~~ 195 (331)
.-+. ....|+...++-+..... .+......|+-.|.||-+|..++....+. +--...
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~----------e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~n 155 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHP----------EFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLN 155 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCc----------cccccceEEEEhhcccchhhhhhhhHHHHHhcCceeec
Confidence 1111 123444444443333322 25667899999999999999887664332 101236
Q ss_pred eeEEEEecccccCC
Q 042745 196 VAGIVLVHPYFWGS 209 (331)
Q Consensus 196 i~~~i~~~p~~~~~ 209 (331)
+.+|+|--+|+++.
T Consensus 156 f~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 156 FIGVALGDSWISPE 169 (414)
T ss_pred ceeEEccCcccChh
Confidence 78888866666543
No 241
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=69.00 E-value=18 Score=24.65 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
.+.+..-++|++..... -.++++.|+|-|.|=.+|...++..
T Consensus 20 ~~~V~~qI~yvk~~~~~----------~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKI----------NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC-------------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC----------CCCceEEEEecCCcccHHHHHHHHh
Confidence 35667788888875431 2368999999999999998877665
No 242
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=68.87 E-value=7.7 Score=35.63 Aligned_cols=94 Identities=19% Similarity=0.131 Sum_probs=59.4
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCC----------CCCChHHHHHHHHHHHHHhcc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPEN----------PVPCAHDDSWAAIKWVASHVN 150 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~----------~~~~~~~d~~~~~~~l~~~~~ 150 (331)
.+|+|++--|-+-.. +.. ..-...++ +-+-+.++||..... +..+...|.+.+++-++...
T Consensus 62 drPtV~~T~GY~~~~-~p~----r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY- 132 (448)
T PF05576_consen 62 DRPTVLYTEGYNVST-SPR----RSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY- 132 (448)
T ss_pred CCCeEEEecCccccc-Ccc----ccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc-
Confidence 579999988754322 211 11123343 455578888865331 23345678888888887742
Q ss_pred CCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEe
Q 042745 151 GSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLV 202 (331)
Q Consensus 151 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~ 202 (331)
+.+=+-.|-|=||+.|+..=..+++ .+.+.|..
T Consensus 133 -------------~~kWISTG~SKGGmTa~y~rrFyP~------DVD~tVaY 165 (448)
T PF05576_consen 133 -------------PGKWISTGGSKGGMTAVYYRRFYPD------DVDGTVAY 165 (448)
T ss_pred -------------cCCceecCcCCCceeEEEEeeeCCC------CCCeeeee
Confidence 3555668999999999776666665 46666664
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.92 E-value=20 Score=34.56 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=19.9
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
|...|.-+||||||.+|=.++...-
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred CCCceEEEecccchHHHHHHHHHHh
Confidence 4577999999999999977766543
No 244
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=65.39 E-value=9.1 Score=34.99 Aligned_cols=20 Identities=25% Similarity=0.394 Sum_probs=16.3
Q ss_pred CCeEEEeeCCchHHHHHHHH
Q 042745 164 FQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a 183 (331)
.++|-++|||.||.++..+.
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 47999999999998875443
No 245
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=64.84 E-value=19 Score=29.24 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=45.9
Q ss_pred hHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHH
Q 042745 103 YHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHM 182 (331)
Q Consensus 103 ~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~ 182 (331)
...+.+.+...-|+.++.|.|.++ ++..++ ++++|+.... ...+.+.+++.|.|+.-.+..
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~pg~lK---naiD~l~~~~------------~~~Kpv~~~~~s~g~~~~~~a 118 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YPGALK---NAIDWLSREA------------LGGKPVLLLGTSGGGAGGLRA 118 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CCHHHH---HHHHhCCHhH------------hCCCcEEEEecCCCchhHHHH
Confidence 345666666666999999999865 455554 6788886652 445778889888888777765
Q ss_pred HHhhc
Q 042745 183 GIRNG 187 (331)
Q Consensus 183 a~~~~ 187 (331)
..+..
T Consensus 119 ~~~Lr 123 (184)
T COG0431 119 QNQLR 123 (184)
T ss_pred HHHHH
Confidence 55443
No 246
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=64.24 E-value=22 Score=24.37 Aligned_cols=61 Identities=13% Similarity=0.090 Sum_probs=43.0
Q ss_pred eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeec-CCCcHHHHHHHHHHHHHhh
Q 042745 261 RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLF-NPNSENARVMLQQIASFFN 326 (331)
Q Consensus 261 Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~-~~~~~~~~~~~~~i~~fl~ 326 (331)
=++|+||-.|-.- .-..+++.|.+.|. .++.++--+|+..-- ....+..+++++++..|++
T Consensus 18 ~v~i~HG~~eh~~-ry~~~a~~L~~~G~----~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSG-RYAHLAEFLAEQGY----AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHH-HHHHHHHHHHhCCC----EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5888999877433 24567888989876 667778788887632 1223566888888888874
No 247
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.11 E-value=28 Score=27.60 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=23.7
Q ss_pred CeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 165 QRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
+.|.|+.+|||-.+|-.++... +++..+.+++
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~--------~lksatAiNG 88 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGI--------RLKSATAING 88 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhc--------cccceeeecC
Confidence 5688999999999998888765 4555555543
No 248
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=57.56 E-value=20 Score=26.78 Aligned_cols=14 Identities=21% Similarity=0.489 Sum_probs=10.8
Q ss_pred CccEEEEEcCCccc
Q 042745 81 KLPLLVYIHGGGFC 94 (331)
Q Consensus 81 ~~p~vv~~HGgg~~ 94 (331)
+..++|++||.-|.
T Consensus 55 ~~klaIfVDGcfWH 68 (117)
T TIGR00632 55 EYRCVIFIHGCFWH 68 (117)
T ss_pred CCCEEEEEcccccc
Confidence 35599999997655
No 249
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=57.51 E-value=56 Score=34.76 Aligned_cols=96 Identities=20% Similarity=0.162 Sum_probs=54.1
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHH-HHHHHHHhccCCCCCccc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWA-AIKWVASHVNGSGPEDWL 158 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~ 158 (331)
+..|.+.|+|. +-|. ...+..++.+.-+-.....+. +.--.+.++++.+ .++.+++.
T Consensus 2121 se~~~~Ffv~p---IEG~------tt~l~~la~rle~PaYglQ~T---~~vP~dSies~A~~yirqirkv---------- 2178 (2376)
T KOG1202|consen 2121 SEEPPLFFVHP---IEGF------TTALESLASRLEIPAYGLQCT---EAVPLDSIESLAAYYIRQIRKV---------- 2178 (2376)
T ss_pred ccCCceEEEec---cccc------hHHHHHHHhhcCCcchhhhcc---ccCCcchHHHHHHHHHHHHHhc----------
Confidence 56789999996 3333 344567776654433222222 1111233444433 23333332
Q ss_pred cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecc
Q 042745 159 NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHP 204 (331)
Q Consensus 159 ~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p 204 (331)
-.....-|.|+|+|+-++..+|....... ....+|++.+
T Consensus 2179 ---QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~----~~~~lillDG 2217 (2376)
T KOG1202|consen 2179 ---QPEGPYRLAGYSYGACLAFEMASQLQEQQ----SPAPLILLDG 2217 (2376)
T ss_pred ---CCCCCeeeeccchhHHHHHHHHHHHHhhc----CCCcEEEecC
Confidence 12245679999999999999988776543 3444777643
No 250
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=55.79 E-value=9.5 Score=35.24 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=40.6
Q ss_pred eEEEEEeCCCccchhH-HHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 261 RVLVFVAEKDKLAARG-WLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 261 Pvli~~G~~D~~v~~~-~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
|++|+.|+-|.+.++. ..+.+.+...|+ .+-.+..||.++... .+..+......+.+++||..
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGi--A~LtvDmPG~G~s~~--~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGI--AMLTVDMPGQGESPK--WPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT---EEEEE--TTSGGGTT--T-S-S-CCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCC--EEEEEccCCCccccc--CCCCcCHHHHHHHHHHHHhc
Confidence 9999999999998764 445567889998 787888999988632 12223445678888998865
No 251
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=54.33 E-value=37 Score=28.54 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=25.7
Q ss_pred CCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHH
Q 042745 114 CNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANI 178 (331)
Q Consensus 114 ~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 178 (331)
-|+.++.|.|-.+ ++..+ .++++|+....... + ....+.++|+|.| ||..
T Consensus 92 Dgvii~TPEYn~s----ipg~L---KNaiDwls~~~~~~--~-----~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 92 EGQVWCSPERHGA----ITGSQ---KDQIDWIPLSVGPV--R-----PTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred CEEEEeCCccccC----cCHHH---HHHHHhcccCcccc--c-----ccCCCcEEEEEeC-CcHh
Confidence 3555555555433 23333 35777776531100 0 1334679999998 4433
No 252
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=52.17 E-value=61 Score=29.31 Aligned_cols=82 Identities=12% Similarity=0.120 Sum_probs=50.5
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 160 (331)
.+..|||-|...+..++...-.-...++.+ +++|=.|..--|+..=...-.+.+.|+.+-++++++..
T Consensus 265 S~APVIFSHSsA~~vcns~rNVPDdVL~ll-k~NgGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va----------- 332 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVPDDVLQLL-KENGGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA----------- 332 (419)
T ss_pred hcCceEeecccHHHHhcCccCCcHHHHHHH-hhcCCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh-----------
Confidence 455689999988777665431223444544 45554443333342222333455899999999999873
Q ss_pred cCCCCeEEEeeCCchH
Q 042745 161 YADFQRVFFAGDSAGA 176 (331)
Q Consensus 161 ~~d~~~i~l~G~S~GG 176 (331)
..+.|+|.|.=-|-
T Consensus 333 --G~~hIGlGg~yDGi 346 (419)
T KOG4127|consen 333 --GIDHIGLGGDYDGI 346 (419)
T ss_pred --ccceeeccCCcCCc
Confidence 45789998865553
No 253
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=48.77 E-value=33 Score=23.04 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=23.9
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEe
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSV 121 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~ 121 (331)
..|.++++|||.- .| -..++..+|.+.|+.++.+
T Consensus 30 ~~~~~~lvhGga~-~G------aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAP-KG------ADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCC-CC------HHHHHHHHHHHCCCeeEEe
Confidence 4588999999541 12 3577788898889866553
No 254
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=48.29 E-value=30 Score=28.84 Aligned_cols=44 Identities=9% Similarity=0.166 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRA 126 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~ 126 (331)
++.+.|.||-=.+ ++.....|..-.+..+.+.|+.+...+....
T Consensus 30 g~~~~i~FIPtAs---~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~ 73 (224)
T COG3340 30 GKRKTIAFIPTAS---VDSEDDFYVEKVRNALAKLGLEVSELHLSKP 73 (224)
T ss_pred CCCceEEEEecCc---cccchHHHHHHHHHHHHHcCCeeeeeeccCC
Confidence 4467888887532 2222222444555666778998887775544
No 255
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=42.97 E-value=2.9e+02 Score=25.96 Aligned_cols=114 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEE--ec-CCCC-----------------CCCCCCChHHHHH
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVS--VD-YRRA-----------------PENPVPCAHDDSW 139 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~--~d-yr~~-----------------~~~~~~~~~~d~~ 139 (331)
.+.|.||++-| ..|+..+- ...-++.++.+.|+.|.. .| ||-+ +...-...++=+.
T Consensus 97 ~~~P~vImmvG---LQGsGKTT-t~~KLA~~lkk~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak 172 (451)
T COG0541 97 KKPPTVILMVG---LQGSGKTT-TAGKLAKYLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAK 172 (451)
T ss_pred CCCCeEEEEEe---ccCCChHh-HHHHHHHHHHHcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHH
Confidence 45689999988 66666542 223333444456865544 44 4411 1111223444455
Q ss_pred HHHHHHHHhccC---------CCC-Cccc------cccCCCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEE
Q 042745 140 AAIKWVASHVNG---------SGP-EDWL------NRYADFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVL 201 (331)
Q Consensus 140 ~~~~~l~~~~~~---------~~~-~~~~------~~~~d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~ 201 (331)
.++++.+..... ++- ..+. ..-++|+.+.++=+||=|+-|...|....+. ..+.|+|+
T Consensus 173 ~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~----l~itGvIl 246 (451)
T COG0541 173 AALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEA----LGITGVIL 246 (451)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhh----cCCceEEE
Confidence 666665554210 000 0000 0126799999999999999999999887663 26778876
No 256
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.78 E-value=27 Score=29.60 Aligned_cols=26 Identities=23% Similarity=0.055 Sum_probs=20.5
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
+.++.-.+.|-|+|+..|..++....
T Consensus 26 i~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 26 VINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 44445679999999999999887643
No 257
>COG4425 Predicted membrane protein [Function unknown]
Probab=42.02 E-value=77 Score=29.70 Aligned_cols=80 Identities=19% Similarity=0.215 Sum_probs=43.4
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCC-------CCCCCChHH--HHHHHHHHHHHhccCCCC
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAP-------ENPVPCAHD--DSWAAIKWVASHVNGSGP 154 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~-------~~~~~~~~~--d~~~~~~~l~~~~~~~~~ 154 (331)
+|+.--|.||+.... ..-++.+ ....++.+++.|..-+ +..+..... =..+++.++.+...
T Consensus 324 vVv~~TGTGWIdp~a-----~~t~EyL-~~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~---- 393 (588)
T COG4425 324 VVVTSTGTGWIDPAA-----ADTLEYL-YNGDVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK---- 393 (588)
T ss_pred EEEcCCCCCCCCHHH-----HhHHHHH-hCCceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc----
Confidence 344445667764322 2333443 4445888899988543 122222111 12345555555443
Q ss_pred CccccccCCCCeEEEeeCCchHHHHH
Q 042745 155 EDWLNRYADFQRVFFAGDSAGANIAH 180 (331)
Q Consensus 155 ~~~~~~~~d~~~i~l~G~S~GG~~Al 180 (331)
-..-|.+|.|.|.|++-..
T Consensus 394 -------~sRPKLylhG~SLGa~~s~ 412 (588)
T COG4425 394 -------SSRPKLYLHGESLGAMGSE 412 (588)
T ss_pred -------CCCCceEEeccccccccCc
Confidence 2335899999999986543
No 258
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.38 E-value=43 Score=27.20 Aligned_cols=34 Identities=3% Similarity=0.231 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
+...+++|.... ...+.|+|+|||--|.+...+.
T Consensus 66 ~~~asleyAv~~-------------L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 66 NCLSVLQYAVDV-------------LKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred chhhhHHHHHHh-------------cCCCEEEEecCCCchHHHHHHc
Confidence 467888888776 5668999999999998887653
No 259
>PLN03006 carbonate dehydratase
Probab=40.37 E-value=40 Score=29.78 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 138 SWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 138 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
+..+++|.... .+-+.|+|+|||.-|.+...+.
T Consensus 158 ~~aSLEYAV~~-------------L~V~~IVV~GHs~CGaV~Aal~ 190 (301)
T PLN03006 158 TKAALEFSVNT-------------LNVENILVIGHSRCGGIQALMK 190 (301)
T ss_pred hhhhHHHHHHH-------------hCCCEEEEecCCCchHHHHHhh
Confidence 56789998887 5678999999999998886543
No 260
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.89 E-value=39 Score=26.96 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=16.7
Q ss_pred EEeeCCchHHHHHHHHHhh
Q 042745 168 FFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~ 186 (331)
.+.|.|+|+.+|..++...
T Consensus 31 ~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 31 IVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 6999999999999988654
No 261
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=35.31 E-value=1e+02 Score=28.66 Aligned_cols=61 Identities=11% Similarity=0.150 Sum_probs=39.5
Q ss_pred CeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhh
Q 042745 260 ARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFN 326 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 326 (331)
+.+|+++|+.|+.......+ ..... +..+++.||++|+-....-..++..++...|.+|-.
T Consensus 352 ~rmlFVYG~nDPW~A~~f~l----~~g~~--ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEPFRL----GKGKR--DSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CeEEEEeCCCCCcccCcccc----CCCCc--ceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 58899999999876433322 11111 667778899999865443333556677777777753
No 262
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=35.02 E-value=87 Score=27.97 Aligned_cols=62 Identities=13% Similarity=0.232 Sum_probs=40.4
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcC---------------C----CcceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESG---------------W----KGRAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g---------------~----~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
+|||..|..|.+++ ..+.+.++|.-.+ . +....+..+.+++|... . +++.+++
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~-----qP~~al~ 308 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-----RPNETFI 308 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c-----CHHHHHH
Confidence 89999999998887 5566666665111 0 00145556668999653 1 3466777
Q ss_pred HHHHHhhcc
Q 042745 320 QIASFFNLQ 328 (331)
Q Consensus 320 ~i~~fl~~~ 328 (331)
-+.+||+..
T Consensus 309 m~~~fi~~~ 317 (319)
T PLN02213 309 MFQRWISGQ 317 (319)
T ss_pred HHHHHHcCC
Confidence 777888653
No 263
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.85 E-value=52 Score=25.01 Aligned_cols=18 Identities=28% Similarity=0.366 Sum_probs=13.2
Q ss_pred CCccEEEEEcCCcccccCCCC
Q 042745 80 NKLPLLVYIHGGGFCIETPFS 100 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~ 100 (331)
.++|+|+-+||. .|+..+
T Consensus 50 p~KpLVlSfHG~---tGtGKn 67 (127)
T PF06309_consen 50 PRKPLVLSFHGW---TGTGKN 67 (127)
T ss_pred CCCCEEEEeecC---CCCcHH
Confidence 578999999983 455543
No 264
>PLN00416 carbonate dehydratase
Probab=34.71 E-value=57 Score=28.22 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
++..+++|.... .+.+.|+|+|||--|.+...+.
T Consensus 125 ~~~asLEyAv~~-------------L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVH-------------LKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHH-------------hCCCEEEEecCCCchHHHHHHh
Confidence 456788888887 5568999999999998877664
No 265
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=34.70 E-value=37 Score=31.74 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=20.1
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhhcc
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRNGR 188 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~~~ 188 (331)
+.++ .|.|.|+|+.+|..++.+..+
T Consensus 100 l~p~--vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 100 LLPR--IISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred CCCC--EEEEECHHHHHHHHHHcCCHH
Confidence 5554 699999999999999886543
No 266
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=34.17 E-value=64 Score=24.09 Aligned_cols=32 Identities=9% Similarity=0.242 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHH
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAH 180 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al 180 (331)
.++..+++|.... .+.+.|+|+|||--|.+..
T Consensus 43 ~~~~~sl~~av~~-------------l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 43 LDVLASLEYAVEV-------------LGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred ccHHHHHHHHHHh-------------hCCCEEEEEccCCCcHHHH
Confidence 4677788887776 5568999999988887663
No 267
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.08 E-value=29 Score=30.91 Aligned_cols=18 Identities=28% Similarity=0.342 Sum_probs=16.0
Q ss_pred EEeeCCchHHHHHHHHHh
Q 042745 168 FFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~ 185 (331)
.|.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 489999999999998864
No 268
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.97 E-value=64 Score=26.43 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
.+..+++|.... ...+.|+|+|||--|.+.+.+.
T Consensus 72 ~~~asleyav~~-------------l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAV-------------LKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHH-------------hCCCEEEEeCCCcchHHHHHhc
Confidence 366888888886 5668999999999888877654
No 269
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.87 E-value=48 Score=27.86 Aligned_cols=23 Identities=22% Similarity=0.172 Sum_probs=18.3
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
++++ .+.|.|+|+.+|..++...
T Consensus 27 i~~~--~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 27 LEPS--AISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCce--EEEEeCHHHHHHHHHHcCC
Confidence 4444 5999999999999988644
No 270
>PRK15219 carbonic anhydrase; Provisional
Probab=33.44 E-value=63 Score=27.70 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
|+..+++|.... .+.+.|+|+|||.-|.+...+.
T Consensus 128 ~~~~slEyAv~~-------------L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 128 DLLGSMEFACAV-------------AGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred chhhHHHHHHHH-------------cCCCEEEEecCCcchHHHHHHh
Confidence 567889998887 5678999999999888876653
No 271
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=32.23 E-value=2.5e+02 Score=25.04 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=47.2
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCccccc
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLNR 160 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 160 (331)
++| ||.-|.+.....+...-.....++.++.+.|++-+.+.-..-. ..-...++|+.+-++|+.+.
T Consensus 188 ~~P-viaSHsn~ral~~h~RNltD~~i~~ia~~GGvigi~~~~~fl~-~~~~~~~~~~~~hi~~i~~l------------ 253 (309)
T cd01301 188 NAP-VIASHSNARALCDHPRNLTDAQLKAIAETGGVIGVNFYPAFLS-PGADATLDDVVRHIDYIVDL------------ 253 (309)
T ss_pred CCC-EEEeccChHHhcCCCCCCCHHHHHHHHHcCCEEEEeeeHHHhC-CCCCCCHHHHHHHHHHHHHh------------
Confidence 455 8889987654443322124577888888877655544211111 11235688888999998886
Q ss_pred cCCCCeEEEeeC
Q 042745 161 YADFQRVFFAGD 172 (331)
Q Consensus 161 ~~d~~~i~l~G~ 172 (331)
+..++|+|..+
T Consensus 254 -~G~dhVgiGsD 264 (309)
T cd01301 254 -IGIDHVGLGSD 264 (309)
T ss_pred -cCCCeEEECcc
Confidence 44577777554
No 272
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=32.21 E-value=1.1e+02 Score=23.82 Aligned_cols=36 Identities=14% Similarity=0.361 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
..++...++|.... .+.+.|+|+|||-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~-------------l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYH-------------LGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHT-------------ST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeec-------------CCCCEEEEEcCCCchHHHHHHh
Confidence 56778899998876 5678999999999998885544
No 273
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=31.98 E-value=57 Score=27.15 Aligned_cols=38 Identities=3% Similarity=0.129 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 136 DDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 136 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
.++..+++|.... .+-+.|+|+||+--|++.+.+....
T Consensus 76 ~~~l~sleyAv~~-------------L~v~~IiV~GH~~CGav~aa~~~~~ 113 (207)
T COG0288 76 GSVLRSLEYAVYV-------------LGVKEIIVCGHTDCGAVKAALDDQL 113 (207)
T ss_pred cchhHHHHHHHHH-------------cCCCEEEEecCCCcHHHHhcccccc
Confidence 6777888888876 5678999999999999887765443
No 274
>PLN03014 carbonic anhydrase
Probab=31.95 E-value=59 Score=29.30 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
++..+++|.... .+.+.|+|+|||--|.+...+.
T Consensus 205 ~v~asLEYAV~~-------------L~V~~IVV~GHs~CGaV~Aa~~ 238 (347)
T PLN03014 205 GVGAAIEYAVLH-------------LKVENIVVIGHSACGGIKGLMS 238 (347)
T ss_pred cchhHHHHHHHH-------------hCCCEEEEeCCCCchHHHHHHh
Confidence 366889998887 5668999999999888876554
No 275
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=31.76 E-value=30 Score=28.12 Aligned_cols=21 Identities=33% Similarity=0.291 Sum_probs=17.5
Q ss_pred EEEeeCCchHHHHHHHHHhhc
Q 042745 167 VFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 167 i~l~G~S~GG~~Al~~a~~~~ 187 (331)
=.+.|.|+||.+|..++....
T Consensus 29 d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 29 KRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred ceEEEECHHHHHHHHHHcCCC
Confidence 459999999999999887543
No 276
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=31.35 E-value=1.8e+02 Score=27.07 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=37.1
Q ss_pred eEEEEEeCCCccc-hhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 261 RVLVFVAEKDKLA-ARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 261 Pvli~~G~~D~~v-~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
|++|++|.-|... +.-..+.+.|.+.|. .+ +.++.-+|+.....+...........+++||...
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy--~v--l~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGI--AM--LTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCC--EE--EEECCCCCCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 8999999888553 233456778888887 44 4444444554322111123334446777887653
No 277
>PLN02154 carbonic anhydrase
Probab=31.35 E-value=77 Score=27.87 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
.+.++++|.... .+.+.|+|+|||--|.+...+.
T Consensus 151 ~~~aslEyAv~~-------------L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 151 ETNSALEFAVTT-------------LQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred chhhHHHHHHHH-------------hCCCEEEEecCCCchHHHHHHh
Confidence 356788888876 5668999999999888887664
No 278
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=31.21 E-value=1.5e+02 Score=25.31 Aligned_cols=61 Identities=10% Similarity=-0.005 Sum_probs=32.2
Q ss_pred eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 261 RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 261 Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
|++++||--... ..+...+..... ..+++.++--+|+..-........+.+.+.+.+|++.
T Consensus 27 plvllHG~~~~~----~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 27 PLLIFNGIGANL----ELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY 87 (276)
T ss_pred cEEEEeCCCcch----HHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH
Confidence 999999955432 222222222222 4577777777888663211111234455556666553
No 279
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=31.11 E-value=1.7e+02 Score=23.34 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=40.5
Q ss_pred eEEEEEeCCCccch-hHHHHHHHHHhcCCCcceEEEEeCC-----CceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 261 RVLVFVAEKDKLAA-RGWLYYEKLKESGWKGRAEIVETKG-----ESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 261 Pvli~~G~~D~~v~-~~~~~~~~l~~~g~~~~~~~~~~~g-----~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
.+||..++.|-... -+..++..|++.|. .|++.-... ..|.-...-...-.-..+-+.+.+|+++|
T Consensus 2 k~LIlYstr~GqT~kIA~~iA~~L~e~g~--qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~ 73 (175)
T COG4635 2 KTLILYSTRDGQTRKIAEYIASHLRESGI--QVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKH 73 (175)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHhhhcCC--eeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHH
Confidence 48999999996664 56778889999987 777664332 12211111111123345666677788775
No 280
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=30.53 E-value=2.1e+02 Score=20.90 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=44.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCe--EEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNV--VAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDW 157 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~--~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~ 157 (331)
...|+|||.=- +.. +...+..++...|. .|+-.|-. ++ .. ++..++.-+...
T Consensus 12 ~~~~VVifSKs-----~C~----~c~~~k~ll~~~~v~~~vvELD~~--~~---g~---eiq~~l~~~tg~--------- 65 (104)
T KOG1752|consen 12 SENPVVIFSKS-----SCP----YCHRAKELLSDLGVNPKVVELDED--ED---GS---EIQKALKKLTGQ--------- 65 (104)
T ss_pred hcCCEEEEECC-----cCc----hHHHHHHHHHhCCCCCEEEEccCC--CC---cH---HHHHHHHHhcCC---------
Confidence 45788888873 111 45556777776663 44444422 21 11 444444443322
Q ss_pred ccccCCCCeEEEeeCCchHHHHHHHHHhh
Q 042745 158 LNRYADFQRVFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 158 ~~~~~d~~~i~l~G~S~GG~~Al~~a~~~ 186 (331)
.-.-+|+|.|.+.||.--+..+...
T Consensus 66 ----~tvP~vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 66 ----RTVPNVFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred ----CCCCEEEECCEEEcCHHHHHHHHHc
Confidence 2235899999999998776655443
No 281
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.38 E-value=1.4e+02 Score=28.70 Aligned_cols=40 Identities=15% Similarity=0.097 Sum_probs=28.0
Q ss_pred CCCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEec
Q 042745 163 DFQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVH 203 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~ 203 (331)
....|.|+|+|.|+.+.+.++.+.....- -..|.-|+++.
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke-~~iIEnViL~G 484 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKE-VGIIENVILFG 484 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhccc-ccceeeeeecc
Confidence 34679999999999999876665433211 12678888874
No 282
>PRK10279 hypothetical protein; Provisional
Probab=30.30 E-value=57 Score=28.92 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=17.8
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHh
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~ 185 (331)
+.+ -.|.|.|+|+.++..+|..
T Consensus 32 i~~--d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 32 IEI--DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred CCc--CEEEEEcHHHHHHHHHHcC
Confidence 554 4599999999999988854
No 283
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=30.07 E-value=45 Score=30.68 Aligned_cols=61 Identities=23% Similarity=0.387 Sum_probs=36.0
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcCC--------------------CcceEEEEeCCCceeeeecCCCcHHHHHHH
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESGW--------------------KGRAEIVETKGESHVFHLFNPNSENARVML 318 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g~--------------------~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 318 (331)
+|||.+|..|.+++ ..+.+.++|.-.+. -++..+..+.+++|.... ...+.++
T Consensus 332 rVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~-----dqP~~a~ 406 (415)
T PF00450_consen 332 RVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ-----DQPEAAL 406 (415)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH-----HSHHHHH
T ss_pred eeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh-----hCHHHHH
Confidence 89999999999887 45555555441110 002346677888886553 3446677
Q ss_pred HHHHHHhh
Q 042745 319 QQIASFFN 326 (331)
Q Consensus 319 ~~i~~fl~ 326 (331)
+-+.+||+
T Consensus 407 ~m~~~fl~ 414 (415)
T PF00450_consen 407 QMFRRFLK 414 (415)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 77777875
No 284
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=29.43 E-value=1.4e+02 Score=28.34 Aligned_cols=63 Identities=17% Similarity=0.313 Sum_probs=40.5
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcC-----------C---C----------c-----ceEEEEeCCCceeeeecCC
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESG-----------W---K----------G-----RAEIVETKGESHVFHLFNP 309 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g-----------~---~----------~-----~~~~~~~~g~~H~~~~~~~ 309 (331)
+|||++|..|.+++ ..+.+.+.|.=.+ + . + +..+..+.+++|...
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp---- 441 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVP---- 441 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccCh----
Confidence 89999999998886 4455555554100 0 0 0 234555667888544
Q ss_pred CcHHHHHHHHHHHHHhhcc
Q 042745 310 NSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 310 ~~~~~~~~~~~i~~fl~~~ 328 (331)
.+..+.+.+.+.+|++..
T Consensus 442 -~d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 442 -MDQPAVALTMINRFLRNR 459 (462)
T ss_pred -hhHHHHHHHHHHHHHcCC
Confidence 345677888888898754
No 285
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=29.27 E-value=38 Score=30.03 Aligned_cols=17 Identities=35% Similarity=0.681 Sum_probs=15.2
Q ss_pred EEeeCCchHHHHHHHHH
Q 042745 168 FFAGDSAGANIAHHMGI 184 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~ 184 (331)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 38999999999999886
No 286
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=28.97 E-value=63 Score=28.73 Aligned_cols=22 Identities=23% Similarity=0.235 Sum_probs=17.9
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHh
Q 042745 162 ADFQRVFFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 162 ~d~~~i~l~G~S~GG~~Al~~a~~ 185 (331)
+.++ .|.|.|+|+.++..++..
T Consensus 42 i~~d--~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 42 IPVD--MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CCCC--EEEEECHHHHHHHHHHcC
Confidence 5443 489999999999998875
No 287
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=28.92 E-value=63 Score=25.71 Aligned_cols=22 Identities=32% Similarity=0.308 Sum_probs=18.1
Q ss_pred eEEEeeCCchHHHHHHHHHhhc
Q 042745 166 RVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 166 ~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
.-.+.|.|+|+..|..++....
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 3458999999999999987654
No 288
>PRK04531 acetylglutamate kinase; Provisional
Probab=28.89 E-value=1.8e+02 Score=26.99 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=15.0
Q ss_pred EEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEec
Q 042745 84 LLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVD 122 (331)
Q Consensus 84 ~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~d 122 (331)
-+|++||||- .+.+++.+.|+..-..+
T Consensus 68 ~~VlVHGggp------------qI~~~l~~~gie~~~v~ 94 (398)
T PRK04531 68 TPIVVHGAGP------------QLDAELDAAGIEKETVN 94 (398)
T ss_pred cEEEEECCCH------------HHHHHHHHcCCCcEEEC
Confidence 4677888762 23345555676444344
No 289
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.26 E-value=37 Score=29.29 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=14.4
Q ss_pred CCCeEEEeeCCchHHHHH
Q 042745 163 DFQRVFFAGDSAGANIAH 180 (331)
Q Consensus 163 d~~~i~l~G~S~GG~~Al 180 (331)
+.+.|.++|||+|..=.-
T Consensus 233 ~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred CCCEEEEEeCCCchhhHH
Confidence 558999999999975443
No 290
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.16 E-value=43 Score=26.55 Aligned_cols=20 Identities=30% Similarity=0.287 Sum_probs=16.4
Q ss_pred EEEeeCCchHHHHHHHHHhh
Q 042745 167 VFFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 167 i~l~G~S~GG~~Al~~a~~~ 186 (331)
-.+.|.|.||.+|+.++...
T Consensus 29 d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALGY 48 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC-
T ss_pred cEEEEcChhhhhHHHHHhCC
Confidence 45999999999998887763
No 291
>PLN03019 carbonic anhydrase
Probab=28.00 E-value=71 Score=28.60 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 138 SWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 138 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
+..+++|.... ...+.|+|+|||--|.+...+.
T Consensus 201 v~aSIEYAV~~-------------L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 201 VGAAIEYAVLH-------------LKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred cchhHHHHHHH-------------hCCCEEEEecCCCchHHHHHHh
Confidence 56788888886 5668999999999888877654
No 292
>PRK10437 carbonic anhydrase; Provisional
Probab=26.61 E-value=1.1e+02 Score=25.82 Aligned_cols=34 Identities=3% Similarity=0.260 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHHMG 183 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~~a 183 (331)
++..+++|.... .+.+.|+|+|||--|.+...+.
T Consensus 76 ~~~~~leyAV~~-------------L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 76 NCLSVVQYAVDV-------------LEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred chHHHHHHHHHH-------------cCCCEEEEeCCCCchHHHHHHc
Confidence 467788887776 5568999999999998887663
No 293
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=26.33 E-value=2.6e+02 Score=20.28 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhc
Q 042745 275 RGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNL 327 (331)
Q Consensus 275 ~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 327 (331)
.+..|.+.|+..|+ ++++....+.....++. ..+...++...+..|++.
T Consensus 12 ~AqaF~DYl~sqgI--~~~i~~~~~~~~~lwl~--de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 12 AAQAFIDYLASQGI--ELQIEPEGQGQFALWLH--DEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHTT----EEEE-SSSE--EEEES---GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCC--eEEEEECCCCceEEEEe--CHHHHHHHHHHHHHHHHC
Confidence 46789999999998 77766633322334433 345667778888888875
No 294
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=26.12 E-value=46 Score=26.65 Aligned_cols=21 Identities=24% Similarity=0.196 Sum_probs=17.5
Q ss_pred EEEeeCCchHHHHHHHHHhhc
Q 042745 167 VFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 167 i~l~G~S~GG~~Al~~a~~~~ 187 (331)
=.+.|.|+|+.+|..++....
T Consensus 30 d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 30 DIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eEEEEeCHHHHHHHHHHcCCC
Confidence 358999999999998887643
No 295
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=26.12 E-value=74 Score=29.74 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=26.0
Q ss_pred eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCC
Q 042745 261 RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNP 309 (331)
Q Consensus 261 Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~ 309 (331)
-+++.+|+.|+...-+ ....... .+..++++|+.|+..+..+
T Consensus 378 nviFtNG~~DPW~~lg-----v~~~~~~--~~~~~~I~g~~Hc~Dl~~~ 419 (434)
T PF05577_consen 378 NVIFTNGELDPWRALG-----VTSDSSD--SVPAIVIPGGAHCSDLYPP 419 (434)
T ss_dssp SEEEEEETT-CCGGGS-------S-SSS--SEEEEEETT--TTGGGS--
T ss_pred eEEeeCCCCCCccccc-----CCCCCCC--CcccEEECCCeeeccccCC
Confidence 7999999999988654 1122232 5666789999999887654
No 296
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=25.82 E-value=1.5e+02 Score=27.90 Aligned_cols=62 Identities=13% Similarity=0.232 Sum_probs=40.6
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcC---------------C----CcceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESG---------------W----KGRAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g---------------~----~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
+|||..|+.|.+++ ..+.+.++|.=.+ . +....+..+.+++|... . +.+.++.
T Consensus 349 rVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~-----qP~~al~ 422 (433)
T PLN03016 349 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-----RPNETFI 422 (433)
T ss_pred eEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-C-----CHHHHHH
Confidence 89999999998887 5566666664111 0 00145566778999653 1 3466777
Q ss_pred HHHHHhhcc
Q 042745 320 QIASFFNLQ 328 (331)
Q Consensus 320 ~i~~fl~~~ 328 (331)
-+.+||+.+
T Consensus 423 m~~~Fi~~~ 431 (433)
T PLN03016 423 MFQRWISGQ 431 (433)
T ss_pred HHHHHHcCC
Confidence 777888654
No 297
>PLN02209 serine carboxypeptidase
Probab=25.60 E-value=1.6e+02 Score=27.73 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=40.1
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcCCC------------------cc-eEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESGWK------------------GR-AEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g~~------------------~~-~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
++||..|+.|.+++ ..+.+.+.|.-.+.. ++ ..+..+.+++|... . +.+++++
T Consensus 353 rVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~-----qP~~al~ 426 (437)
T PLN02209 353 RSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-Y-----LPEESSI 426 (437)
T ss_pred eEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-c-----CHHHHHH
Confidence 89999999998887 556677766511100 02 45556778899643 1 4466777
Q ss_pred HHHHHhhc
Q 042745 320 QIASFFNL 327 (331)
Q Consensus 320 ~i~~fl~~ 327 (331)
-+.+|++.
T Consensus 427 m~~~fi~~ 434 (437)
T PLN02209 427 MFQRWISG 434 (437)
T ss_pred HHHHHHcC
Confidence 77778864
No 298
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=24.65 E-value=1.1e+02 Score=22.53 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=32.9
Q ss_pred EEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 042745 86 VYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVAS 147 (331)
Q Consensus 86 v~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~ 147 (331)
|++|| ..|+.. ..+++.++...|+.++.++...............+...++.+..
T Consensus 1 ill~G---~~G~GK----T~l~~~la~~l~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 1 ILLHG---PPGTGK----TTLARALAQYLGFPFIEIDGSELISSYAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp EEEES---STTSSH----HHHHHHHHHHTTSEEEEEETTHHHTSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEC---cCCCCe----eHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 67888 345543 36778888888998888886643322233334444455555443
No 299
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=24.51 E-value=1.3e+02 Score=28.45 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=39.0
Q ss_pred eEEEEEeCCCccch--hHHHHHHHHHhcC-------------CCc------ceEEEEeCCCceeeeecCCCcHHHHHHHH
Q 042745 261 RVLVFVAEKDKLAA--RGWLYYEKLKESG-------------WKG------RAEIVETKGESHVFHLFNPNSENARVMLQ 319 (331)
Q Consensus 261 Pvli~~G~~D~~v~--~~~~~~~~l~~~g-------------~~~------~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 319 (331)
+++|+.|+.|..++ ..+.+.+.|.-.. +.+ +..+..+.|++|......| ++++.
T Consensus 365 rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p-----~~al~ 439 (454)
T KOG1282|consen 365 RVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKP-----ESALI 439 (454)
T ss_pred EEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCc-----HHHHH
Confidence 89999999998887 3444444443110 000 1233556799996554433 56667
Q ss_pred HHHHHhhcc
Q 042745 320 QIASFFNLQ 328 (331)
Q Consensus 320 ~i~~fl~~~ 328 (331)
-+.+||..+
T Consensus 440 m~~~fl~g~ 448 (454)
T KOG1282|consen 440 MFQRFLNGQ 448 (454)
T ss_pred HHHHHHcCC
Confidence 777888764
No 300
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.38 E-value=50 Score=28.97 Aligned_cols=19 Identities=42% Similarity=0.599 Sum_probs=16.6
Q ss_pred EEeeCCchHHHHHHHHHhh
Q 042745 168 FFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~ 186 (331)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5899999999999998654
No 301
>PRK10824 glutaredoxin-4; Provisional
Probab=23.48 E-value=3.2e+02 Score=20.34 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=44.5
Q ss_pred CCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhccCCCCCcccc
Q 042745 80 NKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRRAPENPVPCAHDDSWAAIKWVASHVNGSGPEDWLN 159 (331)
Q Consensus 80 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 159 (331)
...|+|||..|..-.-.. .|...+..++.+.|...-.+|.-.. .++...+..+...
T Consensus 13 ~~~~Vvvf~Kg~~~~p~C----pyc~~ak~lL~~~~i~~~~idi~~d---------~~~~~~l~~~sg~----------- 68 (115)
T PRK10824 13 AENPILLYMKGSPKLPSC----GFSAQAVQALSACGERFAYVDILQN---------PDIRAELPKYANW----------- 68 (115)
T ss_pred hcCCEEEEECCCCCCCCC----chHHHHHHHHHHcCCCceEEEecCC---------HHHHHHHHHHhCC-----------
Confidence 457899999973211111 1455566676676732222222110 1333343333221
Q ss_pred ccCCCCeEEEeeCCchHHHHHHHHHhhc
Q 042745 160 RYADFQRVFFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 160 ~~~d~~~i~l~G~S~GG~~Al~~a~~~~ 187 (331)
----+|+|-|..-||.--+..+.+..
T Consensus 69 --~TVPQIFI~G~~IGG~ddl~~l~~~G 94 (115)
T PRK10824 69 --PTFPQLWVDGELVGGCDIVIEMYQRG 94 (115)
T ss_pred --CCCCeEEECCEEEcChHHHHHHHHCC
Confidence 22358999999999998777665443
No 302
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.37 E-value=55 Score=29.69 Aligned_cols=18 Identities=33% Similarity=0.575 Sum_probs=16.0
Q ss_pred EEeeCCchHHHHHHHHHh
Q 042745 168 FFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~ 185 (331)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 589999999999999864
No 303
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=23.19 E-value=2.7e+02 Score=23.27 Aligned_cols=62 Identities=13% Similarity=0.044 Sum_probs=29.9
Q ss_pred eEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCc---HHHHHHHHHHHHHhh
Q 042745 261 RVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNS---ENARVMLQQIASFFN 326 (331)
Q Consensus 261 Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~---~~~~~~~~~i~~fl~ 326 (331)
|++++||.-......-..+...+.+.|. .++.++--+|+........ -...++.+++.++++
T Consensus 27 ~vl~~hG~~g~~~~~~~~~~~~l~~~g~----~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 27 KLLLLHGGPGMSHEYLENLRELLKEEGR----EVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVRE 91 (288)
T ss_pred eEEEEcCCCCccHHHHHHHHHHHHhcCC----EEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHH
Confidence 8999999643222222334555665554 4455544445543211101 123445555555554
No 304
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.85 E-value=54 Score=28.17 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=16.1
Q ss_pred EEeeCCchHHHHHHHHHh
Q 042745 168 FFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~ 185 (331)
.+.|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 389999999999998876
No 305
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=22.54 E-value=96 Score=26.47 Aligned_cols=19 Identities=37% Similarity=0.228 Sum_probs=16.9
Q ss_pred EEeeCCchHHHHHHHHHhh
Q 042745 168 FFAGDSAGANIAHHMGIRN 186 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~ 186 (331)
.+.|.|+|+.+|..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 7999999999999988754
No 306
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=22.48 E-value=52 Score=29.87 Aligned_cols=18 Identities=28% Similarity=0.362 Sum_probs=16.0
Q ss_pred EEeeCCchHHHHHHHHHh
Q 042745 168 FFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~ 185 (331)
.|.|.|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 489999999999999874
No 307
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.37 E-value=88 Score=26.74 Aligned_cols=17 Identities=41% Similarity=0.438 Sum_probs=15.2
Q ss_pred EEeeCCchHHHHHHHHH
Q 042745 168 FFAGDSAGANIAHHMGI 184 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~ 184 (331)
.+.|.|+|+..|..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 69999999999999874
No 308
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.08 E-value=51 Score=29.26 Aligned_cols=17 Identities=35% Similarity=0.528 Sum_probs=15.2
Q ss_pred EEeeCCchHHHHHHHHH
Q 042745 168 FFAGDSAGANIAHHMGI 184 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~ 184 (331)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 58999999999998874
No 309
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.68 E-value=2.1e+02 Score=22.66 Aligned_cols=37 Identities=16% Similarity=-0.040 Sum_probs=20.1
Q ss_pred CCeEEEeeCCchHHHHHHHHHhhcccccCCCceeEEEEecccc
Q 042745 164 FQRVFFAGDSAGANIAHHMGIRNGREILDGFNVAGIVLVHPYF 206 (331)
Q Consensus 164 ~~~i~l~G~S~GG~~Al~~a~~~~~~~~~~~~i~~~i~~~p~~ 206 (331)
..+|+++|-|..|.+-+.++-...+ .+..++-.+|.-
T Consensus 68 gk~I~~yGA~~kg~tlln~~g~~~~------~I~~vvD~np~K 104 (160)
T PF08484_consen 68 GKRIAGYGAGAKGNTLLNYFGLDND------LIDYVVDDNPLK 104 (160)
T ss_dssp T--EEEE---SHHHHHHHHHT--TT------TS--EEES-GGG
T ss_pred CCEEEEECcchHHHHHHHHhCCCcc------eeEEEEeCChhh
Confidence 3789999999999988877754432 577887766554
No 310
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.68 E-value=62 Score=26.98 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=17.4
Q ss_pred EEeeCCchHHHHHHHHHhhc
Q 042745 168 FFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+.|.|+|+.+|+.++....
T Consensus 29 ~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 29 IISGTSIGAINGALIAGGDP 48 (215)
T ss_pred EEEEECHHHHHHHHHHcCCc
Confidence 59999999999999987653
No 311
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=21.46 E-value=6.7e+02 Score=23.63 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHH
Q 042745 135 HDDSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIA 179 (331)
Q Consensus 135 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~A 179 (331)
++++.++.+.+..... ...+||+++..|.|..+.
T Consensus 277 ~~el~~~~~~l~~~~~-----------~~g~rvaivs~sGG~g~l 310 (447)
T TIGR02717 277 IEELFDLARLLSNQPL-----------PKGNRVAIITNAGGPGVI 310 (447)
T ss_pred HHHHHHHHHHHhcCCC-----------CCCCeEEEEECCchHHHH
Confidence 4555556555554322 344899999999776543
No 312
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=21.34 E-value=1.1e+02 Score=26.31 Aligned_cols=19 Identities=32% Similarity=0.184 Sum_probs=16.4
Q ss_pred EeeCCchHHHHHHHHHhhc
Q 042745 169 FAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 169 l~G~S~GG~~Al~~a~~~~ 187 (331)
+.|-|+|+.+|..++....
T Consensus 34 i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 34 ISGASAGALAACCLLCDLP 52 (245)
T ss_pred EEEEcHHHHHHHHHHhCCc
Confidence 9999999999999886543
No 313
>PLN02578 hydrolase
Probab=21.32 E-value=2.4e+02 Score=25.41 Aligned_cols=63 Identities=10% Similarity=-0.052 Sum_probs=34.2
Q ss_pred CeEEEEEeCCCccchhHHHHHHHHHhcCCCcceEEEEeCCCceeeeecCCCcHHHHHHHHHHHHHhhcc
Q 042745 260 ARVLVFVAEKDKLAARGWLYYEKLKESGWKGRAEIVETKGESHVFHLFNPNSENARVMLQQIASFFNLQ 328 (331)
Q Consensus 260 ~Pvli~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 328 (331)
||++++||--..... -......|.+ ...++.++--+|+..-.....-....+.+++.+|+++.
T Consensus 87 ~~vvliHG~~~~~~~-w~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~ 149 (354)
T PLN02578 87 LPIVLIHGFGASAFH-WRYNIPELAK-----KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV 149 (354)
T ss_pred CeEEEECCCCCCHHH-HHHHHHHHhc-----CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh
Confidence 499999997653211 1122233422 35677777667876533221123345556777777653
No 314
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.06 E-value=60 Score=23.70 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=22.8
Q ss_pred EEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecC
Q 042745 85 LVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDY 123 (331)
Q Consensus 85 vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dy 123 (331)
||++.| ..|+.. ..++..++.+.|+.++..|-
T Consensus 1 vI~I~G---~~gsGK----ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISG---PPGSGK----STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEE---STTSSH----HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEEC---CCCCCH----HHHHHHHHHHHCCeEEEecc
Confidence 577777 445543 46677887777999988886
No 315
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.90 E-value=1.7e+02 Score=23.00 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHH 181 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~ 181 (331)
+...+++|.... .+.+.|.|+|||--|.+...
T Consensus 77 ~~~~sl~yav~~-------------l~v~~IvV~GHt~CG~~~a~ 108 (154)
T cd03378 77 DVLGSLEYAVEV-------------LGVPLVVVLGHESCGAVAAA 108 (154)
T ss_pred hHHHHHHHHHHH-------------hCCCEEEEEcCCCccHHHHH
Confidence 466778887776 56689999999997766654
No 316
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.58 E-value=2.9e+02 Score=24.36 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=22.9
Q ss_pred CccEEEEEcCCcccccCCCCc--hhHHHHHHHHhcCCeEEEEe
Q 042745 81 KLPLLVYIHGGGFCIETPFSP--FYHSYLNALVSACNVVAVSV 121 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~--~~~~~~~~la~~~G~~vv~~ 121 (331)
+.|.|++.||+++. .+.++ .|...+..+..+ |+.++..
T Consensus 178 ~~~~i~i~~gas~~--~K~wp~e~~~~l~~~l~~~-~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRD--DKTWPEERWRELARLLLAR-GLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcc--cCCCCHHHHHHHHHHHHHC-CCeEEEe
Confidence 46889999997753 33332 344555666544 7766543
No 317
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=20.56 E-value=6.1e+02 Score=22.58 Aligned_cols=91 Identities=15% Similarity=0.147 Sum_probs=59.3
Q ss_pred CCCCCCCCcccceeeecCCCCCCCCceEEEEeecCCCCCCCCCCCccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCe
Q 042745 37 PSFDPKTNVDSKDVVYSPQNSNNSNALSARLYLPKGTNNNNNNNKLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNV 116 (331)
Q Consensus 37 ~~~~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~ 116 (331)
++.+...+|....+.+.+ -+.+.+-+++-.+. .+.|+|+.=|-+. -...+..+|.+.|+
T Consensus 246 qsgsl~~nVkrStviv~n-----PThiaI~l~Y~~gE------TplPlVi~k~~da----------qA~~i~~iAe~~~i 304 (349)
T COG4792 246 QSGSLANNVKRSTVIVKN-----PTHIAICLRYKRGE------TPLPLVIEKGTDA----------QALQIVKIAEEEGI 304 (349)
T ss_pred hcCChhhccceeeEEEec-----CceEEEEEeeccCC------CCCCEEEEecCcH----------HHHHHHHHHHHhCC
Confidence 445667888888888875 56788887777665 5889888876311 24567788888888
Q ss_pred EEEEec------CCC-CCCCCCC-ChHHHHHHHHHHHHHh
Q 042745 117 VAVSVD------YRR-APENPVP-CAHDDSWAAIKWVASH 148 (331)
Q Consensus 117 ~vv~~d------yr~-~~~~~~~-~~~~d~~~~~~~l~~~ 148 (331)
-|+--+ |+- .-+...| +.++-+.++++|+...
T Consensus 305 pVveni~LAraL~~d~~~g~~IP~~~fEpvA~lLr~a~~~ 344 (349)
T COG4792 305 PVVENIPLARALYRDVHVGQYIPEDFFEPVAALLRMAEDL 344 (349)
T ss_pred CeeeccHHHHHHHhccccCCcCcHHHHHHHHHHHHHHHhc
Confidence 776432 221 1122333 4567777888888663
No 318
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.42 E-value=71 Score=27.55 Aligned_cols=20 Identities=30% Similarity=0.111 Sum_probs=17.2
Q ss_pred EEeeCCchHHHHHHHHHhhc
Q 042745 168 FFAGDSAGANIAHHMGIRNG 187 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~~~ 187 (331)
.+.|.|+|+.+|..++....
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred EEEEECHHHHhHHHHHhCCc
Confidence 58999999999999887654
No 319
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.36 E-value=1.8e+02 Score=22.39 Aligned_cols=32 Identities=3% Similarity=0.001 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhccCCCCCccccccCCCCeEEEeeCCchHHHHHH
Q 042745 137 DSWAAIKWVASHVNGSGPEDWLNRYADFQRVFFAGDSAGANIAHH 181 (331)
Q Consensus 137 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~Al~ 181 (331)
++...+.|.... .+.+.|+|+||+--|.+.+.
T Consensus 41 ~~~~sl~~av~~-------------l~~~~IiV~gHt~Cg~~~a~ 72 (142)
T cd03379 41 DAIRSLVVSVYL-------------LGTREIIVIHHTDCGMLTFT 72 (142)
T ss_pred hHHHHHHHHHHH-------------hCCCEEEEEeecCCcceEec
Confidence 667778877776 56689999999977766543
No 320
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=20.29 E-value=67 Score=28.00 Aligned_cols=18 Identities=17% Similarity=0.194 Sum_probs=16.1
Q ss_pred EEeeCCchHHHHHHHHHh
Q 042745 168 FFAGDSAGANIAHHMGIR 185 (331)
Q Consensus 168 ~l~G~S~GG~~Al~~a~~ 185 (331)
.|.|.|+|+.++..+|..
T Consensus 41 ~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 41 AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999999875
No 321
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=20.25 E-value=7e+02 Score=23.18 Aligned_cols=76 Identities=17% Similarity=0.080 Sum_probs=39.6
Q ss_pred CccEEEEEcCCcccccCCCCchhHHHHHHHHhcCCeEEEEecCCC--CC---CCCCCChHHHHHHHHHHHHHhccCCCCC
Q 042745 81 KLPLLVYIHGGGFCIETPFSPFYHSYLNALVSACNVVAVSVDYRR--AP---ENPVPCAHDDSWAAIKWVASHVNGSGPE 155 (331)
Q Consensus 81 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~G~~vv~~dyr~--~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 155 (331)
++|+||...=..-+ ...+.+...+..|. +.|+.|+-|.... ++ ...++ ..+++...+..+.....
T Consensus 116 ~~pvvi~Pamn~~m---~~~p~~~~Nl~~L~-~~G~~ii~P~~g~la~~~~g~gr~~-~~~~I~~~~~~~~~~~~----- 185 (399)
T PRK05579 116 TAPVLVAPAMNTQM---WENPATQRNLATLR-SRGVEIIGPASGRLACGDVGPGRMA-EPEEIVAAAERALSPKD----- 185 (399)
T ss_pred CCCEEEEeCCChhH---cCCHHHHHHHHHHH-HCCCEEECCCCccccCCCcCCCCCC-CHHHHHHHHHHHhhhcc-----
Confidence 57888887411111 11223456666764 5699999886542 11 12222 34555444433322211
Q ss_pred ccccccCCCCeEEEeeC
Q 042745 156 DWLNRYADFQRVFFAGD 172 (331)
Q Consensus 156 ~~~~~~~d~~~i~l~G~ 172 (331)
....+|.|.|.
T Consensus 186 ------l~gk~vlITgG 196 (399)
T PRK05579 186 ------LAGKRVLITAG 196 (399)
T ss_pred ------cCCCEEEEeCC
Confidence 34478888888
No 322
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=20.24 E-value=2.4e+02 Score=25.52 Aligned_cols=23 Identities=30% Similarity=0.434 Sum_probs=15.6
Q ss_pred CeEEEeeCCchHHHHHH--HHHhhc
Q 042745 165 QRVFFAGDSAGANIAHH--MGIRNG 187 (331)
Q Consensus 165 ~~i~l~G~S~GG~~Al~--~a~~~~ 187 (331)
+.=.++|-|.|++.+.. +|.+..
T Consensus 303 eeGll~G~SSGan~~aAl~~a~~~e 327 (362)
T KOG1252|consen 303 EEGLLVGISSGANVAAALKLAKRPE 327 (362)
T ss_pred hhCeeecccchHHHHHHHHHHhccc
Confidence 44568999999987754 444443
Done!