BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042746
(408 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 11/190 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EYL GG+++D+ T DE + + + AL++LHS ++H D+K N+L+G +
Sbjct: 96 MEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
S VKL DFG + T ++ + + G+P WMAPEVV + GP+ D+WSLG IEM+
Sbjct: 154 S-VKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 173 TGKPAWEDFGANTLSRIGF--SDELPRF--PTQSSELGRDFLDKCLRREPGERWSCDQLL 228
G+P + N L + ++ P P + S + RDFL++CL + +R S +LL
Sbjct: 211 EGEPPY--LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
Query: 229 KHPFLQSVSP 238
+H FL+ P
Sbjct: 269 QHQFLKIAKP 278
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EYL GG+++D+ T DE + + + AL++LHS ++H D+K N+L+G +
Sbjct: 96 MEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
S VKL DFG + T ++ + G+P WMAPEVV + GP+ D+WSLG IEM+
Sbjct: 154 S-VKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 173 TGKPAWEDFGANTLSRIGF--SDELPRF--PTQSSELGRDFLDKCLRREPGERWSCDQLL 228
G+P + N L + ++ P P + S + RDFL++CL + +R S +LL
Sbjct: 211 EGEPPY--LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268
Query: 229 KHPFLQSVSP 238
+H FL+ P
Sbjct: 269 QHQFLKIAKP 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EYL GG+++D+ T DE + + + AL++LHS ++H D+K N+L+G +
Sbjct: 97 MEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 154
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
S VKL DFG + T ++ + G+P WMAPEVV + GP+ D+WSLG IEM+
Sbjct: 155 S-VKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 173 TGKPAWEDFGANTLSRIGF--SDELPRF--PTQSSELGRDFLDKCLRREPGERWSCDQLL 228
G+P + N L + ++ P P + S + RDFL++CL + +R S +L+
Sbjct: 212 EGEPPY--LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
Query: 229 KHPFLQSVSP 238
+H FL+ P
Sbjct: 270 QHQFLKIAKP 279
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EYL GG+++D+ T DE + + + AL++LHS ++H D+K N+L+G +
Sbjct: 96 MEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
S VKL DFG + T ++ + G+P WMAPEVV + GP+ D+WSLG IEM+
Sbjct: 154 S-VKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 173 TGKPAWEDFGANTLSRIGF--SDELPRF--PTQSSELGRDFLDKCLRREPGERWSCDQLL 228
G+P + N L + ++ P P + S + RDFL++CL + +R S +LL
Sbjct: 211 EGEPPY--LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
Query: 229 KHPFLQSVSP 238
+H FL+ P
Sbjct: 269 QHQFLKIAKP 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EYL GG+++D+ T DE + + + AL++LHS ++H ++K N+L+G +
Sbjct: 97 MEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDG 154
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
S VKL DFG + T ++ + G+P WMAPEVV + GP+ D+WSLG IEM+
Sbjct: 155 S-VKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 173 TGKPAWEDFGANTLSRIGF--SDELPRF--PTQSSELGRDFLDKCLRREPGERWSCDQLL 228
G+P + N L + ++ P P + S + RDFL++CL + +R S +L+
Sbjct: 212 EGEPPY--LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
Query: 229 KHPFLQSVSP 238
+H FL+ P
Sbjct: 270 QHQFLKIAKP 279
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 31/250 (12%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDV---------SYEAPTTSSSCRNLH-------- 52
IG+GSFG V +D V A D+ + T S C + +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 53 ---------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+EYL GG+ DL DE + + I+ L YLHS +H D+K
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 148
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVL+ VKLADFG AG+ T DT+ + G+P WMAPEV++ ++D+WS
Sbjct: 149 ANVLLSEQGD-VKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWS 205
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LG T IE+ G+P D + + + P ++ ++F+D CL ++P R +
Sbjct: 206 LGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPT 265
Query: 224 CDQLLKHPFL 233
+LLKH F+
Sbjct: 266 AKELLKHKFI 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVS---------YEAPTTSSSCRNLH-------- 52
IG+GSFG V +D V A D+ + T S C + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 53 ---------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+EYL GG+ DL DE + + I+ L YLHS +H D+K
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKA 132
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVL+ + VKLADFG AG+ T DT+ + G+P WMAPEV++ ++D+WS
Sbjct: 133 ANVLLSEHGE-VKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LG T IE+ G+P + + + + P S+ ++F++ CL +EP R +
Sbjct: 190 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPT 249
Query: 224 CDQLLKHPFL 233
+LLKH F+
Sbjct: 250 AKELLKHKFI 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVS---------YEAPTTSSSCRNLH-------- 52
IG+GSFG V +D V A D+ + T S C + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 53 ---------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+EYL GG+ DL DE + + I+ L YLHS +H D+K
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKA 147
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVL+ + VKLADFG AG+ T DT+ + G+P WMAPEV++ ++D+WS
Sbjct: 148 ANVLLSEHGE-VKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 204
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LG T IE+ G+P + + + + P S+ ++F++ CL +EP R +
Sbjct: 205 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPT 264
Query: 224 CDQLLKHPFL 233
+LLKH F+
Sbjct: 265 AKELLKHKFI 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVS---------YEAPTTSSSCRNLH-------- 52
IG+GSFG V +D V A D+ + T S C + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 53 ---------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+EYL GG+ DL DE + + I+ L YLHS +H D+K
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKA 132
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVL+ + VKLADFG AG+ T DT+ + G+P WMAPEV++ ++D+WS
Sbjct: 133 ANVLLSEHGE-VKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LG T IE+ G+P + + + + P S+ ++F++ CL +EP R +
Sbjct: 190 LGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPT 249
Query: 224 CDQLLKHPFL 233
+LLKH F+
Sbjct: 250 AKELLKHKFI 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSY---------EAPTTSSSCRNLH-------- 52
IG+GSFG V +D +V A D+ + T S C + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 53 ---------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+EYL GG+ DL +E + + I+ L YLHS +H D+K
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKA 144
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVL+ VKLADFG AG+ T DT+ + G+P WMAPEV++ ++D+WS
Sbjct: 145 ANVLLSEQGD-VKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWS 201
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LG T IE+ G+P D + + + P Q S+ ++F++ CL ++P R +
Sbjct: 202 LGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPT 261
Query: 224 CDQLLKHPFL 233
+LLKH F+
Sbjct: 262 AKELLKHKFI 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 31/256 (12%)
Query: 4 WVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVS---------YEAPTTSSSCRNLH-- 52
+ + + IG+GSFG V +D V A D+ + T S C + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 53 ---------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
+EYL GG+ DL DE + + I+ L YLHS +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKI 146
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
H D+K NVL+ + VKLADFG AG+ T DT+ + G+P WMAPEV++
Sbjct: 147 HRDIKAANVLLSEHGE-VKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRRE 217
++D+WSLG T IE+ G+P + + + + P S+ ++F++ CL +E
Sbjct: 204 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE 263
Query: 218 PGERWSCDQLLKHPFL 233
P R + +LLKH F+
Sbjct: 264 PSFRPTAKELLKHKFI 279
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 28/251 (11%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAP------TTSSSCRNLH----------- 52
+G GS+G+V A+ + G + A V + + C + H
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 53 ------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
+EY G+VSD+ N E + + + L+YLH +H D+K N+
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNI 156
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
L+ KLADFG AG+ T D + G+P WMAPEV++ +D+WSLG
Sbjct: 157 LLN-TEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 167 TIIEMVTGKPAWEDFGANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREPGERWSC 224
T IEM GKP + D + ++ P F P S+ DF+ +CL + P +R +
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA 273
Query: 225 DQLLKHPFLQS 235
QLL+HPF++S
Sbjct: 274 TQLLQHPFVRS 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 105 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 161
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 162 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
Query: 173 TGKPAWED---FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 220 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 278
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 279 HPFLAKAGP 287
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 100 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 156
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 157 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
Query: 173 TGKPAWED---FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 215 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 273
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 274 HPFLAKAGP 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 107 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 163
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 164 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Query: 173 TGKPAWED---FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 222 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 280
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 281 HPFLAKAGP 289
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 150 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 206
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 207 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
Query: 173 TGKPAWED---FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 265 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 323
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 324 HPFLAKAGP 332
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 96 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 152
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 153 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
Query: 173 TGKPAWED---FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 211 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 269
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 270 HPFLAKAGP 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+L GG ++D+ T ++I + ++ AL LH++ ++H D+K ++L+ +
Sbjct: 227 MEFLEGGALTDIVTHTRMNEEQIA--AVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HD 283
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VKL+DFG + + R + G+P WMAPE++ GPE D+WSLG +IEMV
Sbjct: 284 GRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
Query: 173 TGKPAW---EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
G+P + A + R L S L + FLD+ L R+P +R + +LLK
Sbjct: 342 DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL-KGFLDRLLVRDPAQRATAAELLK 400
Query: 230 HPFLQSVSP 238
HPFL P
Sbjct: 401 HPFLAKAGP 409
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNIVHCDVKGKNVLVGP 110
+E+L GG ++D+ + + ++I T C ++ AL YLH++ ++H D+K ++L+
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIA----TVCEAVLQALAYLHAQGVIHRDIKSDSILLTL 176
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
+ VKL+DFG A +S + G+P WMAPEV+ E D+WSLG +IE
Sbjct: 177 DGR-VKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233
Query: 171 MVTGKPAW-EDFGANTLSRIGFSDELPRFPT--QSSELGRDFLDKCLRREPGERWSCDQL 227
MV G+P + D + R+ S P+ + S + RDFL++ L R+P ER + +L
Sbjct: 234 MVDGEPPYFSDSPVQAMKRLRDSPP-PKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292
Query: 228 LKHPFL 233
L HPFL
Sbjct: 293 LDHPFL 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTL--NAYADEITLRSHTYCIVSALKYLHSR 94
V Y + + + +E +PGG++S L + +E T+ +T I+ LKYLH
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-----RGSPLWMAPEV 149
IVH D+KG NVL+ S +K++DFG + R I P G+ +MAPE+
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTS-------KRLAGINPCTETFTGTLQYMAPEI 194
Query: 150 V----RGECQGPESDVWSLGCTIIEMVTGKPAWEDFG--ANTLSRIGFSDELPRFPTQSS 203
+ RG G +D+WSLGCTIIEM TGKP + + G + ++G P P S
Sbjct: 195 IDKGPRG--YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ F+ KC +P +R + LL FL+ S
Sbjct: 253 AEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTL--NAYADEITLRSHTYCIVSALKYLHSR 94
V Y + + + +E +PGG++S L + +E T+ +T I+ LKYLH
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-----RGSPLWMAPEV 149
IVH D+KG NVL+ S +K++DFG + R I P G+ +MAPE+
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTS-------KRLAGINPCTETFTGTLQYMAPEI 180
Query: 150 V----RGECQGPESDVWSLGCTIIEMVTGKPAWEDFG--ANTLSRIGFSDELPRFPTQSS 203
+ RG G +D+WSLGCTIIEM TGKP + + G + ++G P P S
Sbjct: 181 IDKGPRG--YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 238
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
+ F+ KC +P +R + LL FL+
Sbjct: 239 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 15/192 (7%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNIVHCDVKGKNVLVGP 110
+E+L GG ++D+ T ++I T C ++ AL YLH++ ++H D+K ++L+
Sbjct: 121 MEFLEGGALTDIVTHTRMNEEQIA----TVCLSVLRALSYLHNQGVIHRDIKSDSILLTS 176
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
+ +KL+DFG A VS + G+P WMAPEV+ G E D+WSLG +IE
Sbjct: 177 DGR-IKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 171 MVTGKPAW-EDFGANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
M+ G+P + + + RI D LP + + S + R FLD L REP +R + +
Sbjct: 234 MIDGEPPYFNEPPLQAMRRI--RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQE 291
Query: 227 LLKHPFLQSVSP 238
LL HPFL+ P
Sbjct: 292 LLGHPFLKLAGP 303
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + I++ + YLHS I+H D+ N+L+ N + +K+ADFG A + + + +
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN-IKIADFGLATQLKMPHEKHYTLC 173
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSD-EL 195
G+P +++PE+ G ESDVWSLGC ++ G+P ++ D NTL+++ +D E+
Sbjct: 174 --GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
P F + + +D + + LRR P +R S +L HPF+
Sbjct: 232 PSFLSIEA---KDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFA-----YLGDDVSYEAPTTSSSCRNLHLEYLPG------ 58
IG GSFG V A D N +V A Y G + + R L P
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 59 ----------------GTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
G+ SDL E+ + + T+ + L YLHS N++H DVK
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 103 GKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP---ES 159
N+L+ VKL DFG+A ++ G+P WMAPEV+ +G +
Sbjct: 182 AGNILLS-EPGLVKLGDFGSASIMAPANXF------VGTPYWMAPEVILAMDEGQYDGKV 234
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF--SDELPRFPT-QSSELGRDFLDKCLRR 216
DVWSLG T IE+ KP F N +S + +E P + SE R+F+D CL++
Sbjct: 235 DVWSLGITCIELAERKPPL--FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 217 EPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVN 257
P +R + + LLKH F+ + E P ++D +
Sbjct: 293 IPQDRPTSEVLLKHRFV----------LRERPPTVIMDLIQ 323
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
+ +E+ PGG V + L+ E ++ ++ AL +LHS+ I+H D+K NVL+
Sbjct: 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 152
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR----GSPLWMAPEVVRGECQGP-----ESDV 161
++LADFG VS +Q R G+P WMAPEVV E ++D+
Sbjct: 153 EGD-IRLADFG------VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 205
Query: 162 WSLGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREP 218
WSLG T+IEM +P + L +I SD P P++ S RDFL L + P
Sbjct: 206 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP-PTLLTPSKWSVEFRDFLKIALDKNP 264
Query: 219 GERWSCDQLLKHPFLQSVSPSDA--NTVAESS 248
R S QLL+HPF+ S++ + A VAE+
Sbjct: 265 ETRPSAAQLLEHPFVSSITSNKALRELVAEAK 296
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFA-----YLGDDVSYEAPTTSSSCRNLHLEYLPG------ 58
IG GSFG V A D N +V A Y G + + R L P
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 59 ----------------GTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
G+ SDL E+ + + T+ + L YLHS N++H DVK
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 103 GKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP---ES 159
N+L+ VKL DFG+A ++ G+P WMAPEV+ +G +
Sbjct: 143 AGNILLS-EPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDEGQYDGKV 195
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF--SDELPRFPT-QSSELGRDFLDKCLRR 216
DVWSLG T IE+ KP F N +S + +E P + SE R+F+D CL++
Sbjct: 196 DVWSLGITCIELAERKPPL--FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 217 EPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVN 257
P +R + + LLKH F+ + E P ++D +
Sbjct: 254 IPQDRPTSEVLLKHRFV----------LRERPPTVIMDLIQ 284
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 97/193 (50%), Gaps = 20/193 (10%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+ GG V + L E ++ + AL YLH I+H D+K N+L +
Sbjct: 113 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 172
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR----GSPLWMAPEVVRGECQGP-----ESDVWS 163
+KLADFG + + T + IQ R G+P WMAPEVV E ++DVWS
Sbjct: 173 D-IKLADFGVSAKNTRT------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 164 LGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREPGE 220
LG T+IEM +P + L +I S E P P++ S +DFL KCL +
Sbjct: 226 LGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDA 284
Query: 221 RWSCDQLLKHPFL 233
RW+ QLL+HPF+
Sbjct: 285 RWTTSQLLQHPFV 297
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
+ +E+ PGG V + L+ E ++ ++ AL +LHS+ I+H D+K NVL+
Sbjct: 85 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 144
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR----GSPLWMAPEVVRGECQGP-----ESDV 161
++LADFG VS +Q R G+P WMAPEVV E ++D+
Sbjct: 145 EGD-IRLADFG------VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 197
Query: 162 WSLGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREP 218
WSLG T+IEM +P + L +I SD P P++ S RDFL L + P
Sbjct: 198 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP-PTLLTPSKWSVEFRDFLKIALDKNP 256
Query: 219 GERWSCDQLLKHPFLQSVSPSDA--NTVAESS 248
R S QLL+HPF+ S++ + A VAE+
Sbjct: 257 ETRPSAAQLLEHPFVSSITSNKALRELVAEAK 288
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+ GG V + L E ++ + AL YLH I+H D+K N+L +
Sbjct: 86 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 145
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR----GSPLWMAPEVVRGECQGP-----ESDVWS 163
+KLADFG + + T + IQ R G+P WMAPEVV E ++DVWS
Sbjct: 146 D-IKLADFGVSAKNTRT-----XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 199
Query: 164 LGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREPGE 220
LG T+IEM +P + L +I S E P P++ S +DFL KCL +
Sbjct: 200 LGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDA 258
Query: 221 RWSCDQLLKHPFL 233
RW+ QLL+HPF+
Sbjct: 259 RWTTSQLLQHPFV 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+ GG V + L E ++ + AL YLH I+H D+K N+L +
Sbjct: 113 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 172
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR--GSPLWMAPEVVRGECQGP-----ESDVWSLG 165
+KLADFG + + +TR ++ + G+P WMAPEVV E ++DVWSLG
Sbjct: 173 D-IKLADFGVSAK----NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 227
Query: 166 CTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREPGERW 222
T+IEM +P + L +I S E P P++ S +DFL KCL + RW
Sbjct: 228 ITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 286
Query: 223 SCDQLLKHPFL 233
+ QLL+HPF+
Sbjct: 287 TTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E+ GG V + L E ++ + AL YLH I+H D+K N+L +
Sbjct: 113 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 172
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR--GSPLWMAPEVVRGECQGP-----ESDVWSLG 165
+KLADFG + + +TR ++ + G+P WMAPEVV E ++DVWSLG
Sbjct: 173 D-IKLADFGVSAK----NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 227
Query: 166 CTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRF--PTQSSELGRDFLDKCLRREPGERW 222
T+IEM +P + L +I S E P P++ S +DFL KCL + RW
Sbjct: 228 ITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 286
Query: 223 SCDQLLKHPFL 233
+ QLL+HPF+
Sbjct: 287 TTSQLLQHPFV 297
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 53/279 (18%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 130
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 131 IHRDIKPENLLLG-SAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRMHD 185
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 237
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
+ + L+ P +R ++L+HP++ + S +N+ + S
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQNKES 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYC---IVSALKYLHSRNIVHCDVKGKNVL 107
L +E+ G+V+DL N + + Y I+ L +LH ++H D+KG+NVL
Sbjct: 104 LVMEFCGAGSVTDLIK--NTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE------SDV 161
+ N+ VKL DFG + A + T G + G+P WMAPEV+ + + P+ SD+
Sbjct: 162 LTENAE-VKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPEVIACD-ENPDATYDFKSDL 217
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS-SELGRDFLDKCLRREPGE 220
WSLG T IEM G P D + + PR ++ S+ + F++ CL + +
Sbjct: 218 WSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQ 277
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEAS 274
R + +QL+KHPF++ P++ + + D ++ ++ G D+ + E S
Sbjct: 278 RPATEQLMKHPFIRD-QPNERQVRIQ-----LKDHIDRTKKKRGEKDETEYEYS 325
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P G V L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ---RTATYITELANALSYCHSKRV 134
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 135 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHD 189
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 53/285 (18%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLD 254
+ + L+ P +R ++L+HP++ + S +N + S L+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAALE 281
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSR----RTELCGTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 131
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 132 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 186
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 238
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 18/207 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F +Q+SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEE---FFSQTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAES 247
R + + L+HP++ V A ES
Sbjct: 264 RLTIQEALRHPWITPVDTQQAMVRRES 290
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 134
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 135 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 189
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 130
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 131 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 185
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 237
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 89
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 146
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 147 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 201
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 253
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 254 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 155
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 156 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 210
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 262
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 155
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 156 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHD 210
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 262
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 18/207 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F +Q+SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEE---FFSQTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAES 247
R + + L+HP++ V A ES
Sbjct: 264 RLTIQEALRHPWITPVDNQQAMVRRES 290
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 134
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 135 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 189
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 130
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 131 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHD 185
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 237
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 18/207 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F +Q+SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEE---FFSQTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAES 247
R + + L+HP++ V A ES
Sbjct: 264 RLTIQEALRHPWITPVDNQQAMVRRES 290
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKKV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQDTYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 25/207 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYA-------DEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
L ++ L GG+V D+ + A DE T+ + ++ L+YLH +H DVK
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 104 KNVLVGPNSSFVKLADFG-AAGEATVSDTRGVKIQPR--GSPLWMAPEV---VRGECQGP 157
N+L+G + S V++ADFG +A AT D K++ G+P WMAPEV VRG
Sbjct: 150 GNILLGEDGS-VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--YDF 206
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPT--QSSEL----GRDF-- 209
++D+WS G T IE+ TG + + + + ++ P T Q E+ G+ F
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266
Query: 210 -LDKCLRREPGERWSCDQLLKHPFLQS 235
+ CL+++P +R + +LL+H F Q
Sbjct: 267 MISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 134
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE + G
Sbjct: 135 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEXIEGRXHD 189
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 242 ISRLLKHNPSQRPXLREVLEHPWITANSSKPSN 274
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P G V L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ---RTATYITELANALSYCHSKRV 134
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 135 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 189
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 25/207 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYA-------DEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
L ++ L GG+V D+ + A DE T+ + ++ L+YLH +H DVK
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 104 KNVLVGPNSSFVKLADFG-AAGEATVSDTRGVKIQPR--GSPLWMAPEV---VRGECQGP 157
N+L+G + S V++ADFG +A AT D K++ G+P WMAPEV VRG
Sbjct: 145 GNILLGEDGS-VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--YDF 201
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPT--QSSEL----GRDF-- 209
++D+WS G T IE+ TG + + + + ++ P T Q E+ G+ F
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 261
Query: 210 -LDKCLRREPGERWSCDQLLKHPFLQS 235
+ CL+++P +R + +LL+H F Q
Sbjct: 262 MISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 133
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 134 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 188
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 240
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 241 ISRLLKHNPSQRPMLREVLEHPWITANS 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+A+FG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 129
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 130 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHD 184
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 236
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 128
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 129 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 183
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 235
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 236 ISRLLKHNPSQRPMLREVLEHPWITANS 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 53/273 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 131
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+A+FG + A S + G+ ++ PE++ G
Sbjct: 132 IHRDIKPENLLLG-SAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 186
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 238
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVSPSDAN 242
+ + L+ P +R ++L+HP++ + S +N
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L +V ++ +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 132
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 133 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHD 187
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 239
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 53/268 (19%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + A L +V ++ +
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 69
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELANALSYCHSKRV 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G ++ +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 127 IHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 181
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT-------LSRIGFSDELPRFPTQSSELGRDF 209
+ D+WSLG E + GKP +E ANT +SR+ F+ FP +E RD
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFT-----FPDFVTEGARDL 233
Query: 210 LDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ + L+ P +R ++L+HP++ + S
Sbjct: 234 ISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F + +SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEE---FFSHTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAES 247
R + + L+HP++ V A ES
Sbjct: 264 RLTIQEALRHPWITPVDNQQAMVRRES 290
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F + +SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEE---FFSHTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAES 247
R + + L+HP++ V A ES
Sbjct: 264 RLTIQEALRHPWITPVDNQQAMVRRES 290
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 47/265 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A +R + + A L +V ++ +
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ---RTATYITELANALSYCHSKRV 133
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G N +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 134 IHRDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHD 188
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT----LSRIGFSDELPRFPTQSSELGRDFLDK 212
+ D+WSLG E + G P +E +SR+ F+ FP +E RD + +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----FPDFVTEGARDLISR 243
Query: 213 CLRREPGERWSCDQLLKHPFLQSVS 237
L+ +R + ++L+HP++++ S
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANS 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 47/265 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A +R + + A L +V ++ +
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P GTV L+ + ++ R+ TY + +AL Y HS+ +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ---RTATYITELANALSYCHSKRV 133
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G N +K+ADFG + A S + G+ ++ PE++ G
Sbjct: 134 IHRDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHD 188
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANT----LSRIGFSDELPRFPTQSSELGRDFLDK 212
+ D+WSLG E + G P +E +SR+ F+ FP +E RD + +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----FPDFVTEGARDLISR 243
Query: 213 CLRREPGERWSCDQLLKHPFLQSVS 237
L+ +R + ++L+HP++++ S
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANS 268
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + ++E S I+ + YLH++ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +KL DFG A E + D GV+ + G+P ++APE+V E G E+D+WS+G
Sbjct: 151 KNIPIPHIKLIDFGLAHE--IED--GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 167 TIIEMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ I F +E F + +SEL +DF+ K L +E +
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEE---FFSHTSELAKDFIRKLLVKETRK 263
Query: 221 RWSCDQLLKHPFLQSVSPSDA 241
R + + L+HP++ V A
Sbjct: 264 RLTIQEALRHPWITPVDNQQA 284
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 49 RNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
R LHL EY + +L + + ++S T+ + A+ + H N +H DVK +N+
Sbjct: 75 RRLHLVFEYCDHTVLHELDRYQRGVPEHL-VKSITWQTLQAVNFCHKHNCIHRDVKPENI 133
Query: 107 LVGPNSSFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQ-GPESDVWSL 164
L+ S +KL DFG A T SD ++ R + +PE++ G+ Q GP DVW++
Sbjct: 134 LIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRW---YRSPELLVGDTQYGPPVDVWAI 189
Query: 165 GCTIIEMVTGKPAW---EDFGANTLSRIGFSDELPRF-----------------PTQSSE 204
GC E+++G P W D L R D +PR P
Sbjct: 190 GCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEP 249
Query: 205 LGRDF----------LDKCLRREPGERWSCDQLLKHPFLQSV 236
L F L CL +P ER +C+QLL HP+ +++
Sbjct: 250 LELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 86 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 144
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ + G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 145 GE-IKLCDFGVSGQLIDEMAN----EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 172 VTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKH 230
G+ L ++ P+ P+ L +DF++KCL + P ER QL+ H
Sbjct: 200 AVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 259
Query: 231 PFLQSVSPSDANTV 244
F++ SDA V
Sbjct: 260 AFIKR---SDAEEV 270
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTT----------------------- 44
K IG+G+F V +A G A D + PT+
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 45 ----SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
+ L +EY GG V D + E RS IVSA++Y H + IVH D
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRD 136
Query: 101 VKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPE 158
+K +N+L+ + + +K+ADFG + E TV G K+ GSP + APE+ +G + GPE
Sbjct: 137 LKAENLLLDADMN-IKIADFGFSNEFTV----GGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
DVWSLG + +V+G ++ L + R P S + L + L P
Sbjct: 192 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRFLVLNP 250
Query: 219 GERWSCDQLLK 229
+R + +Q++K
Sbjct: 251 IKRGTLEQIMK 261
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 17/199 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 102 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 160
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 161 GE-IKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
Query: 172 VTGKPAWEDFGANTLSRIGFSDEL-----PRFPTQSSELG-RDFLDKCLRREPGERWSCD 225
G+ G+ +++ D + P+ P+ L +DF++KCL + P ER
Sbjct: 216 AVGRYPIGS-GSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 274
Query: 226 QLLKHPFLQSVSPSDANTV 244
QL+ H F++ SDA V
Sbjct: 275 QLMVHAFIKR---SDAEEV 290
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
DE R +T IVSAL+YLH + I+H D+K +N+L+ + +++ DFG A + +
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQ 188
Query: 133 GVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW----EDFGANTLSR 188
G+ +++PE++ + SD+W+LGC I ++V G P + E + +
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 189 IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ------LLKHPFLQSVS 237
+ + FP + RD ++K L + +R C++ L HPF +SV+
Sbjct: 249 LEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 298
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 116/303 (38%), Gaps = 68/303 (22%)
Query: 10 IGRGSFGTVNVAVDRFNGDVF-----------------------AYLGDDVSYEAP---- 42
IG G++G V A D NG F A L ++E P
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 43 -----TTSSSCRNLHLEYLPGGTVSDLATTLNAYAD----EITLRSHTYCIVSALKYLHS 93
T S + R L + DL T L+ + T++ + ++ L +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWM-APEVVRG 152
+VH D+K +N+LV +S +KLADFG A + + + LW APEV+
Sbjct: 139 HRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQ 193
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWE-----DFGANTLSRIGFSDE--------LPR-- 197
D+WS+GC EM KP + D L IG E LPR
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 198 -----------FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAE 246
F T ELG+D L KCL P +R S L HP+ Q + N +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSH 313
Query: 247 SSP 249
P
Sbjct: 314 LPP 316
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 111 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 170 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLV 228
Query: 173 TGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ------ 226
G P + G L FP + RD ++K L + +R C++
Sbjct: 229 AGLPPFRA-GNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 227 LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 288 LKAHPFFESVT 298
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 83 LVMEYASGGEVFDYLVA-HGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 141
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ GSP + APE+ +G + GPE DVWSLG +
Sbjct: 142 DMN-IKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 197 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
Query: 229 K 229
K
Sbjct: 256 K 256
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 113/290 (38%), Gaps = 68/290 (23%)
Query: 10 IGRGSFGTVNVAVDRFNGDVF-----------------------AYLGDDVSYEAP---- 42
IG G++G V A D NG F A L ++E P
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 43 -----TTSSSCRNLHLEYLPGGTVSDLATTLNAYAD----EITLRSHTYCIVSALKYLHS 93
T S + R L + DL T L+ + T++ + ++ L +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWM-APEVVRG 152
+VH D+K +N+LV +S +KLADFG A + + + LW APEV+
Sbjct: 139 HRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQ 193
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWE-----DFGANTLSRIGFSDE--------LPR-- 197
D+WS+GC EM KP + D L IG E LPR
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 198 -----------FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
F T ELG+D L KCL P +R S L HP+ Q +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 93 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 151
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 152 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 211 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 265
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 266 GYGPLKAHPFFESVT 280
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 108 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 166
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 167 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 226 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 280
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 281 GYGPLKAHPFFESVT 295
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTT----------------------- 44
K IG+G+F V +A G A D + PT+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 45 ----SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
+ L +EY GG V D + E RS IVSA++Y H + IVH D
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRD 139
Query: 101 VKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPE 158
+K +N+L+ + + +K+ADFG + E TV G K+ G+P + APE+ +G + GPE
Sbjct: 140 LKAENLLLDADMN-IKIADFGFSNEFTV----GGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
DVWSLG + +V+G ++ L + R P S + L + L P
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRFLVLNP 253
Query: 219 GERWSCDQLLK 229
+R + +Q++K
Sbjct: 254 IKRGTLEQIMK 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 20/197 (10%)
Query: 51 LHLEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV- 108
L LE + GG + D LA + DE T I+ + YLHS+ I H D+K +N+++
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 109 ---GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
PN +KL DFG A + + G+P ++APE+V E G E+D+WS+G
Sbjct: 143 DKNVPNPR-IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIG 198
Query: 166 CTIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPG 219
+++G P + TL+ I F +E + + +SEL +DF+ + L ++P
Sbjct: 199 VITYILLSGASPFLGETKQETLTNISAVNYDFDEE---YFSNTSELAKDFIRRLLVKDPK 255
Query: 220 ERWSCDQLLKHPFLQSV 236
R + Q L+H +++++
Sbjct: 256 RRMTIAQSLEHSWIKAI 272
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 86 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 144
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 145 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 204 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 258
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 259 GYGPLKAHPFFESVT 273
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 108 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 166
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 167 H-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 226 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 280
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 281 GYGPLKAHPFFESVT 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 109 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 168 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 227 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 281
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 282 GYGPLKAHPFFESVT 296
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 111 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 170 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 229 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 284 GYGPLKAHPFFESVT 298
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 87 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 145
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 146 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 205 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 259
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 260 GYGPLKAHPFFESVT 274
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 109 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 168 H-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 227 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 281
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 282 GYGPLKAHPFFESVT 296
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 112/288 (38%), Gaps = 68/288 (23%)
Query: 10 IGRGSFGTVNVAVDRFNGDVF-----------------------AYLGDDVSYEAP---- 42
IG G++G V A D NG F A L ++E P
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 43 -----TTSSSCRNLHLEYLPGGTVSDLATTLNAYAD----EITLRSHTYCIVSALKYLHS 93
T S + R L + DL T L+ + T++ + ++ L +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWM-APEVVRG 152
+VH D+K +N+LV +S +KLADFG A + + + LW APEV+
Sbjct: 139 HRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQ 193
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWE-----DFGANTLSRIGFSDE--------LPR-- 197
D+WS+GC EM KP + D L IG E LPR
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 198 -----------FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
F T ELG+D L KCL P +R S L HP+ Q
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 109 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 168 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 227 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 281
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 282 GYGPLKAHPFFESVT 296
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 116 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 174
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 175 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 234 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 288
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 289 GYGPLKAHPFFESVT 303
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 111 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 170 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 229 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 284 GYGPLKAHPFFESVT 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 109 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 168 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 227 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 281
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 282 GYGPLKAHPFFESVT 296
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 88 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 146
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 147 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 206 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 260
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 261 GYGPLKAHPFFESVT 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 112 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 170
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 171 H-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 230 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 284
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 285 GYGPLKAHPFFESVT 299
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 89 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 148 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 207 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 261
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 262 GYGPLKAHPFFESVT 276
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 112 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 170
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 171 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 230 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 284
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 285 GYGPLKAHPFFESVT 299
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 111 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 170 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP + RD ++K L + +R C++
Sbjct: 229 AGLPPFRAGNEYLIFQKIIKLEYD-----FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 284 GYGPLKAHPFFESVT 298
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 111 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 170 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 173 TGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ------ 226
G P + G L FP + RD ++K L + +R C++
Sbjct: 229 AGLPPFRA-GNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 227 LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 288 LKAHPFFESVT 298
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 51 LHLEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV- 108
L LE + GG + D LA + DE T I+ + YLHS+ I H D+K +N+++
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLL 163
Query: 109 ---GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
PN +KL DFG A + + G+P ++APE+V E G E+D+WS+G
Sbjct: 164 DKNVPNPR-IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIG 219
Query: 166 CTIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPG 219
+++G P + TL+ I F +E + + +SEL +DF+ + L ++P
Sbjct: 220 VITYILLSGASPFLGETKQETLTNISAVNYDFDEE---YFSNTSELAKDFIRRLLVKDPK 276
Query: 220 ERWSCDQLLKHPFLQSV 236
R Q L+H +++++
Sbjct: 277 RRMXIAQSLEHSWIKAI 293
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 90 LVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ GSP + APE+ +G + GPE DVWSLG +
Sbjct: 149 DMN-IKIADFGFSNEFTF----GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 229 K 229
K
Sbjct: 263 K 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 90 LVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ GSP + APE+ +G + GPE DVWSLG +
Sbjct: 149 DMN-IKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 229 K 229
K
Sbjct: 263 K 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 90 LVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ GSP + APE+ +G + GPE DVWSLG +
Sbjct: 149 DMN-IKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 229 K 229
K
Sbjct: 263 K 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 90 LVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ GSP + APE+ +G + GPE DVWSLG +
Sbjct: 149 DMN-IKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 229 K 229
K
Sbjct: 263 K 263
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
L Y G + + ++ DE R +T IVSAL+YLH + I+H D+K +N+L+ +
Sbjct: 114 LSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 172
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+++ DFG A + + G+ +++PE++ + SD+W+LGC I ++V
Sbjct: 173 H-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
Query: 173 TGKPAW----EDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ-- 226
G P + E + ++ + FP RD ++K L + +R C++
Sbjct: 232 AGLPPFRAGNEYLIFQKIIKLEYD-----FPAAFFPKARDLVEKLLVLDATKRLGCEEME 286
Query: 227 ----LLKHPFLQSVS 237
L HPF +SV+
Sbjct: 287 GYGPLKAHPFFESVT 301
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 39/267 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFA---------YLGDDV------------SYEA 41
++ K +G+GSFG V +A + FA + DDV ++E
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 42 PT------TSSSCRNLH--LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYL 91
P T + NL +EYL GG DL + + R+ Y I+ L++L
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYAAEIILGLQFL 134
Query: 92 HSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR 151
HS+ IV+ D+K N+L+ + +K+ADFG E + D + G+P ++APE++
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFC--GTPDYIAPEILL 191
Query: 152 GECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLD 211
G+ D WS G + EM+ G+ + L D P +P + +D L
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRWLEKEAKDLLV 250
Query: 212 KCLRREPGERWSCD-QLLKHPFLQSVS 237
K REP +R + +HP + ++
Sbjct: 251 KLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 39/262 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFA---------YLGDDV------------SYEAPT--- 43
K +G+GSFG V +A + FA + DDV ++E P
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 44 ---TSSSCRNLH--LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
T + NL +EYL GG DL + + R+ Y I+ L++LHS+ I
Sbjct: 84 MFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
V+ D+K N+L+ + +K+ADFG E + D + + G+P ++APE++ G+
Sbjct: 141 VYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFC--GTPDYIAPEILLGQKYN 197
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D WS G + EM+ G+ + L D P +P + +D L K R
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRWLEKEAKDLLVKLFVR 256
Query: 217 EPGERWSCD-QLLKHPFLQSVS 237
EP +R + +HP + ++
Sbjct: 257 EPEKRLGVRGDIRQHPLFREIN 278
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSR 94
V+ + + +L L+Y+ GG +L T L+ Y IV AL++LH
Sbjct: 122 VTLHYAFQTETKLHLILDYINGG---ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGEC 154
I++ D+K +N+L+ N V L DFG + E V+D G+ +MAP++VRG
Sbjct: 179 GIIYRDIKLENILLDSNGHVV-LTDFGLSKEF-VADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 155 QGPESDV--WSLGCTIIEMVTG-KPAWEDFGANT---LSRIGFSDELPRFPTQSSELGRD 208
G + V WSLG + E++TG P D N+ +SR E P +P + S L +D
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKD 295
Query: 209 FLDKCLRREPGERWSC-----DQLLKHPFLQSVSPSD 240
+ + L ++P +R C D++ +H F Q ++ D
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDD 332
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+
Sbjct: 90 LVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTI 168
+ + +K+ADFG + E T G K+ G+P + APE+ +G + GPE DVWSLG +
Sbjct: 149 DMN-IKIADFGFSNEFTF----GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+V+G ++ L + R P S + L K L P +R + +Q++
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 229 K 229
K
Sbjct: 263 K 263
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 129
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 130 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKXFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 245
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 51 LHLEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV- 108
L LE + GG + D LA + DE T I+ + YLHS+ I H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 109 ---GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
PN +KL DFG A + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 DKNVPNPR-IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 166 CTIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPG 219
+++G P + TL+ I F +E + + +SEL +DF+ + L ++P
Sbjct: 206 VITYILLSGASPFLGETKQETLTNISAVNYDFDEE---YFSNTSELAKDFIRRLLVKDPK 262
Query: 220 ERWSCDQLLKHPFLQS 235
R Q L+H ++++
Sbjct: 263 RRMXIAQSLEHSWIKA 278
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 134
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 135 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKXFC-GTPEYLAPEVLEDNDYGRAV 191
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 250
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 251 QRLGGGPSDAKEVMEHRFFLSINWQDV 277
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 129
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 130 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 245
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 129
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 130 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 245
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 129
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 130 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKXFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 245
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 168
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 227
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 171
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 172 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 230
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 231 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 132
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 133 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 189
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 248
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 249 QRLGGGPSDAKEVMEHRFFLSINWQDV 275
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLE------------- 54
+ IG+G+F V ++R G FA DV+ + S +L E
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 55 -----YLPGGTV---------SDLATTLNAYAD------EITLRSHTYCIVSALKYLHSR 94
Y G + +DL + AD E + I+ AL+Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 95 NIVHCDVKGKNVLVGP--NSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV 149
NI+H DVK +NVL+ NS+ VKL DFG A GE+ + G ++ G+P +MAPEV
Sbjct: 150 NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRV---GTPHFMAPEV 204
Query: 150 VRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGR 207
V+ E G DVW G + +++G + I G PR + SE +
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 208 DFLDKCLRREPGERWSCDQLLKHPFLQ 234
D + + L +P ER + + L HP+L+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 187
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 246
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 167
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 168 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 226
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
S++ E P P + + D L CL+R+P +R S +LL HP++Q +
Sbjct: 227 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ-IQTHP 282
Query: 241 ANTVAESS 248
N +A+ +
Sbjct: 283 VNQMAKGT 290
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
R + L+HP+ + P D S+ W + +FE+
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQQALSSA------WSHPQFEK 295
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 274
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
R + L+HP+ + P D S+ W + +FE+
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQQALSSA------WSHPQFEK 295
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 274
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 142 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 172 VTGK-----PAWEDFGANTLSRIGFSDEL-----PRFPTQSSELG-RDFLDKCLRREPGE 220
G+ P ++ ++ D + P+ P+ L +DF++KCL + P E
Sbjct: 197 AVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 256
Query: 221 RWSCDQLLKHPFLQSVSPSDANTV 244
R QL+ H F++ SDA V
Sbjct: 257 RADLKQLMVHAFIKR---SDAEEV 277
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + T VK
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 274
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
S++ E P P + + D L CL+R+P +R S +LL HP++Q
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
R + L+HP+ + P D S+ W + +FE+
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQQALSSA------WSHPQFEK 295
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--------LGDDVSYEAPTTSSSCRNLH------- 52
K +G+G+FG V + ++ G +A + D T S +N
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
+EY GG + + + +E R + IVSAL+YLHSR++V+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-RARFYGAEIVSALEYLHSRDVVYR 129
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K +N+++ + +K+ DFG E +SD +K G+P ++APEV+ G
Sbjct: 130 DIKLENLMLDKDGH-IKITDFGLCKEG-ISDGATMKXFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPG 219
D W LG + EM+ G+ + + L + +E+ RFP S + L L+++P
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPK 245
Query: 220 ERW-----SCDQLLKHPFLQSVSPSDA 241
+R ++++H F S++ D
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 80 HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE--ATVSDTRGVKIQ 137
+T IVS L++LH RNI++ D+K +NVL+ + + V+++D G A E A + T+G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA-- 350
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFG---ANTLSRIGFSDE 194
G+P +MAPE++ GE D ++LG T+ EM+ + + G N + ++
Sbjct: 351 --GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 195 LPRFPTQSSELGRDFLDKCLRREPGERW-----SCDQLLKHPFLQSVS 237
+P + S +DF + L+++P +R SCD L HP + +S
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 80 HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE--ATVSDTRGVKIQ 137
+T IVS L++LH RNI++ D+K +NVL+ + + V+++D G A E A + T+G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA-- 350
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFG---ANTLSRIGFSDE 194
G+P +MAPE++ GE D ++LG T+ EM+ + + G N + ++
Sbjct: 351 --GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 195 LPRFPTQSSELGRDFLDKCLRREPGERW-----SCDQLLKHPFLQSVS 237
+P + S +DF + L+++P +R SCD L HP + +S
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 80 HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE--ATVSDTRGVKIQ 137
+T IVS L++LH RNI++ D+K +NVL+ + + V+++D G A E A + T+G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA-- 350
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFG---ANTLSRIGFSDE 194
G+P +MAPE++ GE D ++LG T+ EM+ + + G N + ++
Sbjct: 351 --GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 195 LPRFPTQSSELGRDFLDKCLRREPGERW-----SCDQLLKHPFLQSVS 237
+P + S +DF + L+++P +R SCD L HP + +S
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 90 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 261
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
R + L+HP+ + P D S+ W + +FE+
Sbjct: 262 RMTIQDSLQHPW---IKPKDTQQALSSA------WSHPQFEK 294
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 18/210 (8%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 90 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 261
Query: 221 RWSCDQLLKHPFLQSVSPSDANTVAESSPR 250
R + L+HP+++ A + A S P+
Sbjct: 262 RMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 80 HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE--ATVSDTRGVKIQ 137
+T IVS L++LH RNI++ D+K +NVL+ + + V+++D G A E A + T+G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA-- 350
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFG---ANTLSRIGFSDE 194
G+P +MAPE++ GE D ++LG T+ EM+ + + G N + ++
Sbjct: 351 --GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 195 LPRFPTQSSELGRDFLDKCLRREPGERW-----SCDQLLKHPFLQSVS 237
+P + S +DF + L+++P +R SCD L HP + +S
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 58 GGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSF-VK 116
G++ +L+ E + + I SAL YLH++ I H D+K +N L N SF +K
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 117 LADFGAAGE---ATVSDTRGVKIQPRGSPLWMAPEVVR--GECQGPESDVWSLGCTIIEM 171
L DFG + E + G+ + G+P ++APEV+ E GP+ D WS G + +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 172 VTGK---PAWEDFGANTLSRI---GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCD 225
+ G P D A+T+S++ E P + S L RD L L R ER+
Sbjct: 270 LMGAVPFPGVND--ADTISQVLNKKLCFENPNYNVLSP-LARDLLSNLLNRNVDERFDAM 326
Query: 226 QLLKHPFLQSVS 237
+ L+HP++ S
Sbjct: 327 RALQHPWISQFS 338
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 35/215 (16%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ + DL N D ++ + + I++ + + HS NI+H D+K +N+LV
Sbjct: 101 LVFEFVDHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS- 158
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQ-GPESDVWSLGCTII 169
S VKL DFG A T++ V + + APE++ G+ + G DVW++GC +
Sbjct: 159 QSGVVKLCDFGFA--RTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVT 216
Query: 170 EMVTGKPAW------------------------EDFGAN------TLSRIGFSDELPRFP 199
EM G+P + E F N L I + L R
Sbjct: 217 EMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRY 276
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
+ SE+ D KCL +P +R C +LL H F Q
Sbjct: 277 PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAY-------------LGDD------------V 37
+++ + +G G+F V + R G +FA L ++ V
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSR 94
+ E S++ L ++ + GG + D Y ++ + ++ ++SA+KYLH
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----VLSAVKYLHEN 125
Query: 95 NIVHCDVKGKNVL-VGPN-SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRG 152
IVH D+K +N+L + P +S + + DFG + + G+ G+P ++APEV+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGTPGYVAPEVLAQ 181
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI--GFSDELPRFPTQSSELGRDF 209
+ D WS+G ++ G P +E+ + +I G+ + F SE +DF
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDF 241
Query: 210 LDKCLRREPGERWSCDQLLKHPFL 233
+ L ++P ER++C++ L HP++
Sbjct: 242 ICHLLEKDPNERYTCEKALSHPWI 265
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY GG V D + E R+ IVSA++Y H + IVH D+K +N+L+ + +
Sbjct: 93 EYASGGEVFDYLVA-HGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN 151
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPESDVWSLGCTIIEM 171
+K+ADFG + E T G K+ G+P + APE+ +G + GPE DVWSLG + +
Sbjct: 152 -IKIADFGFSNEFTF----GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 172 VTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
V+G ++ L + R P S + L K L P +R + +Q+ K
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGKY-RIPFYXSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDAN 242
R + L+HP+++ P D
Sbjct: 263 RMTIQDSLQHPWIK---PKDTQ 281
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
+S+ ++ A+ +H IVH D+K N L+ +KL DFG A + VK
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDXXXVVKDS 187
Query: 138 PRGSPLWMAPEVVRGECQGPES-----------DVWSLGCTIIEMVTGKPAWEDFGANTL 186
G+ +M PE ++ E+ DVWSLGC + M GK ++ N +
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQI 246
Query: 187 SRI------GFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
S++ E P P + + D L CL+R+P +R S +LL HP++Q +
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQ---DVLKCCLKRDPKQRISIPELLAHPYVQ-IQTHP 302
Query: 241 ANTVAESS 248
N +A+ +
Sbjct: 303 VNQMAKGT 310
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 26/189 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS---SFVKLADFGAAGEATV-SDTRGVKIQPR 139
I++ + YLHS I H D+K +N+++ + +K+ DFG A + ++ + +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI----F 178
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG-KPAWEDFGANTLSRIG-----FSD 193
G+P ++APE+V E G E+D+WS+G +++G P D TL+ + F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 194 ELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVL 253
E + + +S L +DF+ + L ++P +R + L+HP+ + P D S+
Sbjct: 239 E---YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW---IKPKDTQQALSSA----- 287
Query: 254 DWVNSEFEE 262
W + +FE+
Sbjct: 288 -WSHPQFEK 295
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 40/270 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY--LGDDVSYEAPTTS---------SSCRN------ 50
+ +G+GSFG V +A + GD++A L DV + S RN
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 51 ------------LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+E++ GG + + DE R + I+SAL +LH + I++
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLM-FHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K NVL+ + KLADFG E + G+P ++APE+++ GP
Sbjct: 148 RDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFC--GTPDYIAPEILQEMLYGPA 204
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W++G + EM+ G +E + L +DE+ +PT E L + + P
Sbjct: 205 VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLHEDATGILKSFMTKNP 263
Query: 219 GERWSC------DQLLKHPFLQSVSPSDAN 242
R +L+HPF + + + N
Sbjct: 264 TMRLGSLTQGGEHAILRHPFFKEIDWAQLN 293
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDAN 242
R + L+HP+ + P D
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQ 281
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDAN 242
R + L+HP+ + P D
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQ 281
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDAN 242
R + L+HP+ + P D
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQ 281
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 33 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A E + Q GS LWMAPEV+R + + P
Sbjct: 148 RDLKSNNIFLHEDLT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 264
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 265 LMAECLKKKRDERPLFPQIL 284
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A E + Q GS LWMAPEV+R + + P
Sbjct: 156 RDLKSNNIFLHEDLT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 272
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 273 LMAECLKKKRDERPLFPQIL 292
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQSVSPSDAN 242
R + L+HP+ + P D
Sbjct: 263 RMTIQDSLQHPW---IKPKDTQ 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 35/196 (17%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTT----------------------- 44
K IG+G+F V +A G A D + PT+
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 45 ----SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
+ L +EY GG V D + E R+ IVSA++Y H + IVH D
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 101 VKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRG-ECQGPE 158
+K +N+L+ + + +K+ADFG + E TV G K+ GSP + APE+ +G + GPE
Sbjct: 140 LKAENLLLDGDMN-IKIADFGFSNEFTV----GNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 159 SDVWSLGCTIIEMVTG 174
DVWSLG + +V+G
Sbjct: 195 VDVWSLGVILYTLVSG 210
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQ 234
R + L+HP+++
Sbjct: 263 RMTIQDSLQHPWIK 276
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A E + Q GS LWMAPEV+R + + P
Sbjct: 128 RDLKSNNIFLHEDLT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 245 LMAECLKKKRDERPLFPQIL 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
+ +K+ DFG A + ++ + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 167 TIIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGE 220
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKK 262
Query: 221 RWSCDQLLKHPFLQ 234
R + L+HP+++
Sbjct: 263 RMTIQDSLQHPWIK 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAG--EATVSDTRGVKIQPRGS 141
I ALK++H R I+H D+K +N+ + + + V+L DFG A +TV R G+
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGT-VQLGDFGIARVLNSTVELARACI----GT 188
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQ 201
P +++PE+ + +SD+W+LGC + E+ T K A+E L S P
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH 248
Query: 202 SSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
S R + + +R P +R S + +L+ F+
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 29 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYC----------------IVSALKYLHSRNIVH 98
G + + + + + +L H + + YLH+++I+H
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + +++ VK+ DFG A E + Q GS LWMAPEV+R + P
Sbjct: 144 RDLKSNNIFLHEDNT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFG-----ANTLSRIGFSDELPRFPTQSSELGRDFL 210
+SDV++ G + E++TG+ + + + R S +L + + + + +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 211 DKCLRREPGERWSCDQLL 228
+CL+++ ER S ++L
Sbjct: 263 AECLKKKRDERPSFPRIL 280
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L LE + GG + D + +E I++ + YLHS I H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 111 NS---SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCT 167
+ +K+ DFG A + + G+P ++APE+V E G E+D+WS+G
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 168 IIEMVTG-KPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+++G P D TL+ + F DE + + +S L +DF+ + L ++P +R
Sbjct: 207 TYILLSGASPFLGDTKQETLANVSAVNYEFEDE---YFSNTSALAKDFIRRLLVKDPKKR 263
Query: 222 WSCDQLLKHPFLQSVSPSDAN 242
+ L+HP+ + P D
Sbjct: 264 MTIQDSLQHPW---IKPKDTQ 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 42/258 (16%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 29 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYC----------------IVSALKYLHSRNIVH 98
G + + + + +L H + + YLH+++I+H
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + +++ VK+ DFG A E + Q GS LWMAPEV+R + P
Sbjct: 144 RDLKSNNIFLHEDNT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFG-----ANTLSRIGFSDELPRFPTQSSELGRDFL 210
+SDV++ G + E++TG+ + + + R S +L + + + + +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 211 DKCLRREPGERWSCDQLL 228
+CL+++ ER S ++L
Sbjct: 263 AECLKKKRDERPSFPRIL 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 55/286 (19%)
Query: 41 APTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
APT + +L G + L T + D I Y I+ LKY+HS N++H D
Sbjct: 112 APTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHIC--YFLYQILRGLKYIHSANVLHRD 169
Query: 101 VKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
+K N+L+ +K+ DFG A A D G + + + APE++ +S
Sbjct: 170 LKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 228
Query: 160 -DVWSLGCTIIEM---------------------VTGKPAWEDF-------GANTLSRIG 190
D+WS+GC + EM + G P+ ED N L +
Sbjct: 229 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 288
Query: 191 FSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL-QSVSPSDANTVAE 246
+++P FP S+ D LDK L P +R +Q L HP+L Q PSD +AE
Sbjct: 289 HKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD-EPIAE 346
Query: 247 SSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSGAIWEP 292
+ + D +L+ +E++ +L A ++P
Sbjct: 347 APFKF----------------DMELDDLPKEKLKELIFEETARFQP 376
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 46/274 (16%)
Query: 9 CIGRGSFGTVNVAVDRFNGDVFAY-LGDDVSYEAPTTSSSCRNLHL-------------- 53
+G+GSFG V DR +A + + S + TS+ R + L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 54 ------------EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDV 101
E GG + D +++ R + S + Y+H NIVH D+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHNIVHRDL 147
Query: 102 KGKNVLVGPNSS--FVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPE 158
K +N+L+ +K+ DFG + + K++ R G+ ++APEV+RG +
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEK 202
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDELPRFPTQSSELGRDFLDK 212
DVWS G + +++G P + +G N L R+ ++ +LP++ T S + +D + K
Sbjct: 203 CDVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDD-AKDLIRK 259
Query: 213 CLRREPGERWSCDQLLKHPFLQSVSPSDANTVAE 246
L P R + Q L+HP++Q S S+ T+++
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYS-SETPTISD 292
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 45/267 (16%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAY-LGDDVSYEAPTTSSSCRNLHL--------------- 53
+G+GSFG V DR +A + + S + TS+ R + L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 54 -----------EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
E GG + D +++ R + S + Y+H NIVH D+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHNIVHRDLK 148
Query: 103 GKNVLVGPNSS--FVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPES 159
+N+L+ +K+ DFG + + K++ R G+ ++APEV+RG +
Sbjct: 149 PENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDELPRFPTQSSELGRDFLDKC 213
DVWS G + +++G P + +G N L R+ ++ +LP++ T S + +D + K
Sbjct: 204 DVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDD-AKDLIRKM 260
Query: 214 LRREPGERWSCDQLLKHPFLQSVSPSD 240
L P R + Q L+HP++Q S +
Sbjct: 261 LTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 105/253 (41%), Gaps = 29/253 (11%)
Query: 2 VSWVRGKC-IGRGSFGTVNVAVDRFNGDVFA--------YLGDDVSYEAPTTSSSCR--- 49
V W + +GRGSFG V+ D+ G A + +++ A TS
Sbjct: 73 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLY 132
Query: 50 ---------NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
N+ +E L GG++ L ++ L + + L+YLHSR I+H D
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL-YYLGQALEGLEYLHSRRILHGD 191
Query: 101 VKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
VK NVL+ + S L DFG A + D P G+ MAPEVV G
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP-GTETHMAPEVVLGRSCD 250
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELP--RFPTQSSELGRDFLDKCL 214
+ DVWS C ++ M+ G W F L S+ P P + L + + L
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGL 310
Query: 215 RREPGERWSCDQL 227
R+EP R S +L
Sbjct: 311 RKEPIHRVSAAEL 323
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ S +K+ DFG A A D G +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSD-LKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 310
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 311 AHPYLAQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 353
Query: 288 AIWEP 292
A ++P
Sbjct: 354 ARFQP 358
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 106/262 (40%), Gaps = 47/262 (17%)
Query: 2 VSWVRGKC-IGRGSFGTVNVAVDRFNGDVFA--------YLGDDVSYEAPTTSSSCR--- 49
V W + +GRGSFG V+ D+ G A + +++ A TS
Sbjct: 92 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLY 151
Query: 50 ---------NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCD 100
N+ +E L GG++ L ++ L + + L+YLHSR I+H D
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL-YYLGQALEGLEYLHSRRILHGD 210
Query: 101 VKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-------------GSPLWMAP 147
VK NVL+ + S L DFG A V +QP G+ MAP
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHA----------VCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 148 EVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELP--RFPTQSSEL 205
EVV G + DVWS C ++ M+ G W F L S+ P P + L
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPL 320
Query: 206 GRDFLDKCLRREPGERWSCDQL 227
+ + LR+EP R S +L
Sbjct: 321 TAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 45/264 (17%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAY-LGDDVSYEAPTTSSSCRNLHL--------------- 53
+G+GSFG V DR +A + + S + TS+ R + L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 54 -----------EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
E GG + D +++ R + S + Y+H NIVH D+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHNIVHRDLK 148
Query: 103 GKNVLVGPNSS--FVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPES 159
+N+L+ +K+ DFG + + K++ R G+ ++APEV+RG +
Sbjct: 149 PENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDELPRFPTQSSELGRDFLDKC 213
DVWS G + +++G P + +G N L R+ ++ +LP++ T S + +D + K
Sbjct: 204 DVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDD-AKDLIRKM 260
Query: 214 LRREPGERWSCDQLLKHPFLQSVS 237
L P R + Q L+HP++Q S
Sbjct: 261 LTFHPSLRITATQCLEHPWIQKYS 284
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 39/272 (14%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEA----PTTSS 46
G+ +G+G FG V +A ++ N + A L ++ ++ P
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 47 SCRNLH--------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
H LE+ P G +L L + RS T+ + AL Y H R +
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRG---ELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G +K+ADFG + A R + G+ ++ PE++ G+
Sbjct: 137 IHRDIKPENLLMGYKGE-LKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHD 191
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+ D+W G E + G P ++ R + +L +FP S+ +D + K LR
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLLRY 250
Query: 217 EPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
P +R +++HP++++ S V +S+
Sbjct: 251 HPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 282
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 39/272 (14%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEA----PTTSS 46
G+ +G+G FG V +A ++ N + A L ++ ++ P
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 47 SCRNLH--------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
H LE+ P G +L L + RS T+ + AL Y H R +
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRG---ELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G +K+ADFG + A R + G+ ++ PE++ G+
Sbjct: 136 IHRDIKPENLLMGYKGE-LKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHD 190
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+ D+W G E + G P ++ R + +L +FP S+ +D + K LR
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLLRY 249
Query: 217 EPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
P +R +++HP++++ S V +S+
Sbjct: 250 HPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 281
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-LKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EDFGA-------NTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 308
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 309 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 351
Query: 288 AIWEP 292
A ++P
Sbjct: 352 ARFQP 356
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + + +L H + I + YLH+++I+H
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 128 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 245 LMAECLKKKRDERPLFPQIL 264
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 40 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 155 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 271
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 272 LMAECLKKKRDERPLFPQIL 291
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 41 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 156 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 272
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 273 LMAECLKKKRDERPLFPQIL 292
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 70/307 (22%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDR--------------FNGDVFA-------YLGDDVSYE- 40
++V +G G++G+V A+D+ F ++FA L + +E
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 41 ------APTTSSSCRNLHLEYLPGGTV-SDLATTLNAYADEITLRSHTYCIVSALKYLHS 93
T +SS RN + YL + +DL + E ++ Y ++ LKY+HS
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
+VH D+K N+ V + +K+ DFG A A T V + + APEV+
Sbjct: 163 AGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSW 216
Query: 154 CQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRI----------------------- 189
++ D+WS+GC + EM+TGK ++ G + L ++
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFK--GKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274
Query: 190 -GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
+ LP+ P + +S D L+K L + +R + Q L HPF + +
Sbjct: 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 334
Query: 241 ANTVAES 247
T A+
Sbjct: 335 EETEAQQ 341
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 80 HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR 139
+ Y + A+ ++HS I H D+K +N+LV + +KL DFG+A + S+ I R
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR 205
Query: 140 GSPLWMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP- 196
+ APE++ G + P D+WS+GC E++ GKP + + + L RI P
Sbjct: 206 ---FYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPT 262
Query: 197 --------------RFPTQSSE------------LGRDFLDKCLRREPGERWSCDQLLKH 230
RFPT ++ L D L++ LR EP R + + + H
Sbjct: 263 KEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322
Query: 231 PFLQSVSPSDANTVAESS 248
PF + S + V +S
Sbjct: 323 PFFDHLRNSYESEVKNNS 340
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 133 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 249
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 250 LMAECLKKKRDERPLFPQIL 269
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 70/307 (22%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDR--------------FNGDVFA-------YLGDDVSYE- 40
++V +G G++G+V A+D+ F ++FA L + +E
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 41 ------APTTSSSCRNLHLEYLPGGTV-SDLATTLNAYADEITLRSHTYCIVSALKYLHS 93
T +SS RN + YL + +DL + E ++ Y ++ LKY+HS
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
+VH D+K N+ V + +K+ DFG A A T V + + APEV+
Sbjct: 145 AGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSW 198
Query: 154 CQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRI----------------------- 189
++ D+WS+GC + EM+TGK ++ G + L ++
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFK--GKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256
Query: 190 -GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
+ LP+ P + +S D L+K L + +R + Q L HPF + +
Sbjct: 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 316
Query: 241 ANTVAES 247
T A+
Sbjct: 317 EETEAQQ 323
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EDFGA-------NTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 308
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 309 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 351
Query: 288 AIWEP 292
A ++P
Sbjct: 352 ARFQP 356
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 123/297 (41%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 42 PTTSSSCRNLHLE---YLPGGTV-SDLATTLNAYA----DEITLRSHTYCIVSALKYLHS 93
P +H E YL V DL T ++A A ++S+ + ++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 173
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 18 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 133 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 249
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 250 LMAECLKKKRDERPLFPQIL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 128 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 245 LMAECLKKKRDERPLFPQIL 264
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 15 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCI----------------VSALKYLHSRNIVH 98
G + + + + +L H + I + YLH+++I+H
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + + + VK+ DFG A + Q GS LWMAPEV+R + + P
Sbjct: 130 RDLKSNNIFLHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRD 208
+SDV++ G + E++TG+ + + N +I F S +L + + + +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 246
Query: 209 FLDKCLRREPGERWSCDQLL 228
+ +CL+++ ER Q+L
Sbjct: 247 LMAECLKKKRDERPLFPQIL 266
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 15/159 (9%)
Query: 84 IVSALKYLHSR-NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSP 142
IV AL++LHS+ +++H DVK NVL+ VK+ DFG +G S + + G
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVDSVAKTID---AGCK 217
Query: 143 LWMAPEVVRGECQGP----ESDVWSLGCTIIEMVTGKPAWEDFGA--NTLSRIGFSDELP 196
+MAPE + E +SD+WSLG T+IE+ + ++ +G L ++ + P
Sbjct: 218 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPSP 276
Query: 197 RFPTQ--SSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ P S+E DF +CL++ ER + +L++HPF
Sbjct: 277 QLPADKFSAEF-VDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAY-------LGDDVSYEAPTTSSSCRNLH---------- 52
IG G F V +A G++ A LG D+ T + +NL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP-RIKTEIEALKNLRHQHICQLYHV 76
Query: 53 ----------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
LEY PGG + D + + ++E T R IVSA+ Y+HS+ H D+K
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEET-RVVFRQIVSAVAYVHSQGYAHRDLK 135
Query: 103 GKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRGECQ-GPESD 160
+N+L +KL DFG A + +Q GS + APE+++G+ G E+D
Sbjct: 136 PENLLFDEYHK-LKLIDFGLC--AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEAD 192
Query: 161 VWSLGCTIIEMVTGKPAWEDFGANTLSR--IGFSDELPRFPTQSSELGRDFLDKCLRREP 218
VWS+G + ++ G ++D L + + ++P++ + SS L L + L+ +P
Sbjct: 193 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSIL---LLQQMLQVDP 249
Query: 219 GERWSCDQLLKHPFLQS 235
+R S LL HP++
Sbjct: 250 KKRISMKNLLNHPWIMQ 266
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 308
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 309 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 351
Query: 288 AIWEP 292
A ++P
Sbjct: 352 ARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 93 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 151
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 152 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 206 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 261
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 262 DPKARFTTEEALRHPWLQ 279
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNIVHCDVKGKNVLV 108
L LE+ P G +L L + RS T+ + AL Y H R ++H D+K +N+L+
Sbjct: 91 LMLEFAPRG---ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM 147
Query: 109 GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
G +K+ADFG + A R + G+ ++ PE++ G+ + D+W G
Sbjct: 148 GYKGE-LKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLC 202
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
E + G P ++ R + +L +FP S+ +D + K LR P +R ++
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Query: 229 KHPFLQSVSPSDANTVAESS 248
+HP++++ S V +S+
Sbjct: 262 EHPWVKANSRRVLPPVYQST 281
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 93 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 151
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 152 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 206 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 261
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 262 DPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 93 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 151
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 152 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 206 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 261
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 262 DPKARFTTEEALRHPWLQ 279
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 42/258 (16%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS------------SCRNLHLE 54
G+ IG GSFGTV +++GDV + ++ APT R++++
Sbjct: 17 GQRIGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYC----------------IVSALKYLHSRNIVH 98
G + + + + +L H + + YLH+++I+H
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP- 157
D+K N+ + +++ VK+ DFG A + Q GS LWMAPEV+R + P
Sbjct: 132 RDLKSNNIFLHEDNT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 158 --ESDVWSLGCTIIEMVTGKPAWEDFG-----ANTLSRIGFSDELPRFPTQSSELGRDFL 210
+SDV++ G + E++TG+ + + + R S +L + + + + +
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
Query: 211 DKCLRREPGERWSCDQLL 228
+CL+++ ER S ++L
Sbjct: 251 AECLKKKRDERPSFPRIL 268
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 92 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 150
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 151 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 204
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 205 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 260
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 261 DPKARFTTEEALRHPWLQ 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 99 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 157
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 158 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 211
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 212 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 267
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 268 DPKARFTTEEALRHPWLQ 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHL---------------- 53
IG GSFGTV+ A + DV + + + A + R + +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 54 ----------EYLPGGTVSDLATTLNA--YADEITLRSHTYCIVSALKYLHSRN--IVHC 99
EYL G++ L A DE S Y + + YLH+RN IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 100 DVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
D+K N+LV + VK+ DFG + S K G+P WMAPEV+R E +S
Sbjct: 164 DLKSPNLLVDKKYT-VKVCDFGLS-RLKASXFLXSKXA-AGTPEWMAPEVLRDEPSNEKS 220
Query: 160 DVWSLGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
DV+S G + E+ T + W + A ++ +GF + P + ++ C EP
Sbjct: 221 DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEP 280
Query: 219 GERWSCDQL--LKHPFLQSVSP 238
+R S + L P ++S P
Sbjct: 281 WKRPSFATIMDLLRPLIKSAVP 302
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 232 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 290
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 291 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 344
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 345 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 400
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 401 DPKARFTTEEALRHPWLQ 418
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 255 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 313
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 314 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 356
Query: 288 AIWEP 292
A ++P
Sbjct: 357 ARFQP 361
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 310
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 311 AHPYLAQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 353
Query: 288 AIWEP 292
A ++P
Sbjct: 354 ARFQP 358
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 41/264 (15%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHL---------------- 53
IG GSFGTV+ A + DV + + + A + R + +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 54 ----------EYLPGGTVSDLATTLNA--YADEITLRSHTYCIVSALKYLHSRN--IVHC 99
EYL G++ L A DE S Y + + YLH+RN IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 100 DVKGKNVLVGPNSSFVKLADFGAA--GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
++K N+LV + VK+ DFG + +T ++ G+P WMAPEV+R E
Sbjct: 164 NLKSPNLLVDKKYT-VKVCDFGLSRLKASTFLSSKSAA----GTPEWMAPEVLRDEPSNE 218
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFG-ANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+SDV+S G + E+ T + W + A ++ +GF + P + ++ C
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 217 EPGERWSCDQL--LKHPFLQSVSP 238
EP +R S + L P ++S P
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 308
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 309 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 351
Query: 288 AIWEP 292
A ++P
Sbjct: 352 ARFQP 356
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
LE + GG + D N E T + + Y ++ A++YLH I+H D+K +NVL+
Sbjct: 218 LELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 276
Query: 113 S--FVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV---VRGECQGPESDVWSL 164
+K+ DFG + GE ++ T G+P ++APEV V D WSL
Sbjct: 277 EDCLIKITDFGHSKILGETSLMRTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDE--------LPRFPTQSSELGRDFLDKCLRR 216
G + ++G P + + +++ D+ +P + SE D + K L
Sbjct: 331 GVILFICLSGYPPFSEHR----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 386
Query: 217 EPGERWSCDQLLKHPFLQ 234
+P R++ ++ L+HP+LQ
Sbjct: 387 DPKARFTTEEALRHPWLQ 404
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 247
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 248 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 306
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 307 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 349
Query: 288 AIWEP 292
A ++P
Sbjct: 350 ARFQP 354
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 49 RNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
RN +L E GG + D L E+ ++S YLH NIVH D+K +N+
Sbjct: 77 RNYYLVMEVYRGGELFD-EIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 135
Query: 107 LVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWS 163
L+ S + +K+ DFG + V G K++ R G+ ++APEV+R + + DVWS
Sbjct: 136 LLESKSRDALIKIVDFGLSAHFEV----GGKMKERLGTAYYIAPEVLRKKYD-EKCDVWS 190
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFP------TQSSELGRDFLDKCLRRE 217
G + ++ G P FG T I E +F TQ S+ + + L E
Sbjct: 191 CGVILYILLCGYPP---FGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYE 247
Query: 218 PGERWSCDQLLKHPFL 233
P +R S ++ L HP++
Sbjct: 248 PSKRISAEEALNHPWI 263
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 255 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 313
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 314 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 356
Query: 288 AIWEP 292
A ++P
Sbjct: 357 ARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 255
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 256 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 314
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 315 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 357
Query: 288 AIWEP 292
A ++P
Sbjct: 358 ARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 246
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 247 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 305
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 306 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 348
Query: 288 AIWEP 292
A ++P
Sbjct: 349 ARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 257
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 258 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 316
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 317 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 359
Query: 288 AIWEP 292
A ++P
Sbjct: 360 ARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 308
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 309 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 351
Query: 288 AIWEP 292
A ++P
Sbjct: 352 ARFQP 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 310
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 311 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 353
Query: 288 AIWEP 292
A ++P
Sbjct: 354 ARFQP 358
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 312
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 313 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 355
Query: 288 AIWEP 292
A ++P
Sbjct: 356 ARFQP 360
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 173
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 270 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 328
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 329 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 371
Query: 288 AIWEP 292
A ++P
Sbjct: 372 ARFQP 376
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + YLH NIVH D+K +N+L+ + +K+ DFG + A + + +K + G+
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMK-ERLGT 201
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQ 201
++APEV+R + + DVWS+G + ++ G P FG T I E ++
Sbjct: 202 AYYIAPEVLRKKYD-EKCDVWSIGVILFILLAGYPP---FGGQTDQEILRKVEKGKYTFD 257
Query: 202 S------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
S SE +D + + L+ + R S Q L+HP+++ +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 53/245 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--------------------- 178
+ + APE++ +S D+WS+GC + EM++ +P +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQ 247
Query: 179 EDF-------GANTLSRIGFSDELP---RFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
ED N L + +++P FP S+ D LDK L P +R +Q L
Sbjct: 248 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK-ALDLLDKMLTFNPHKRIEVEQAL 306
Query: 229 KHPFL-QSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEKLEASARERMGKLAGSSG 287
HP+L Q PSD +AE+ + D +L+ +E++ +L
Sbjct: 307 AHPYLEQYYDPSD-EPIAEAPFKF----------------DMELDDLPKEKLKELIFEET 349
Query: 288 AIWEP 292
A ++P
Sbjct: 350 ARFQP 354
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 84 IVSALKYLHSR-NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSP 142
IV AL++LHS+ +++H DVK NVL+ VK+ DFG +G + + G
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVDDVAKDID---AGCK 173
Query: 143 LWMAPEVVRGECQGP----ESDVWSLGCTIIEMVTGKPAWEDFGA--NTLSRIGFSDELP 196
+MAPE + E +SD+WSLG T+IE+ + ++ +G L ++ + P
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPSP 232
Query: 197 RFPTQ--SSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ P S+E DF +CL++ ER + +L++HPF
Sbjct: 233 QLPADKFSAEF-VDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 34/255 (13%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFA-------------YLGDDVSYEAPTTSSSCRNLH---- 52
+G G+FG V+ V++ G VF + +++S NLH
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 53 --------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
LE+L GG + D + E + ++ LK++H +IVH D+K +
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 105 NVLV-GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
N++ +S VK+ DFG A + + V + + APE+V E G +D+W+
Sbjct: 179 NIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWA 235
Query: 164 LGCTIIEMVTG-KPAWEDFGANTLSRIGFSD---ELPRFPTQSSELGRDFLDKCLRREPG 219
+G +++G P + TL + D + F + S E +DF+ L++EP
Sbjct: 236 IGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE-AKDFIKNLLQKEPR 294
Query: 220 ERWSCDQLLKHPFLQ 234
+R + L+HP+L+
Sbjct: 295 KRLTVHDALEHPWLK 309
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 49 RNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
RN +L E GG + D L E+ ++S YLH NIVH D+K +N+
Sbjct: 94 RNYYLVMEVYRGGELFD-EIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 152
Query: 107 LVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWS 163
L+ S + +K+ DFG + V G K++ R G+ ++APEV+R + + DVWS
Sbjct: 153 LLESKSRDALIKIVDFGLSAHFEV----GGKMKERLGTAYYIAPEVLRKKYD-EKCDVWS 207
Query: 164 LGCTIIEMVTGKPAWEDFGANT----LSRI---GFSDELPRFPTQSSELGRDFLDKCLRR 216
G + ++ G P FG T L R+ FS + P + TQ S+ + + L
Sbjct: 208 CGVILYILLCGYPP---FGGQTDQEILKRVEKGKFSFDPPDW-TQVSDEAKQLVKLMLTY 263
Query: 217 EPGERWSCDQLLKHPFL 233
EP +R S ++ L HP++
Sbjct: 264 EPSKRISAEEALNHPWI 280
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPN--SSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ ++ ++H +IVH D+K +N+L+ + VKLADFG A E V + G+
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGEQQAWFGFAGT 196
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R + G D+W+ G + ++ G P + D + L + + P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 256
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E ++ +++ L P +R + DQ LKHP++
Sbjct: 257 WDTVTPE-AKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 55/275 (20%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSC------------------- 48
K IGRG+FG V V + VFA + ++C
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 49 -------RNLHL--EYLPGGTVSDLATTLNAYADEI---TLRSHTYCIVSALKYLHSRNI 96
NL+L +Y GG DL T L+ + D + R + +V A+ +H +
Sbjct: 140 HYAFQDDNNLYLVMDYYVGG---DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY 196
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGA----AGEATVSDTRGVKIQPRGSPLWMAPEVVRG 152
VH D+K N+L+ N ++LADFG+ + TV + V G+P +++PE+++
Sbjct: 197 VHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAV-----GTPDYISPEILQA 250
Query: 153 E-----CQGPESDVWSLGCTIIEMVTGK-PAWEDFGANTLSRIGFSDELPRFPTQ---SS 203
GPE D WSLG + EM+ G+ P + + T +I E +FPTQ S
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310
Query: 204 ELGRDFLDK--CLRREPGERWSCDQLLKHPFLQSV 236
E +D + + C R + + KHPF +
Sbjct: 311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EYLP G + D A D L ++ I ++YL SR VH D+ +N+LV
Sbjct: 86 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTI 168
+ + VK+ADFG A + V +P SP+ W APE + +SDVWS G +
Sbjct: 146 -SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 204
Query: 169 IEMVT 173
E+ T
Sbjct: 205 YELFT 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ +P
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLT---EPCY 179
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 240 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 175
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 173
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 112/267 (41%), Gaps = 45/267 (16%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLE------------- 54
+ IG+G F V ++R G FA DV+ + S +L E
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 55 -----YLPGGTV---------SDLATTLNAYAD------EITLRSHTYCIVSALKYLHSR 94
Y G + +DL + AD E + I+ AL+Y H
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 95 NIVHCDVKGKNVLVGP--NSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV 149
NI+H DVK VL+ NS+ VKL FG A GE+ + G ++ G+P +MAPEV
Sbjct: 152 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRV---GTPHFMAPEV 206
Query: 150 VRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGR 207
V+ E G DVW G + +++G + I G PR + SE +
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 266
Query: 208 DFLDKCLRREPGERWSCDQLLKHPFLQ 234
D + + L +P ER + + L HP+L+
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L+ L + D L +S+ + ++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEVVT------LWYRAPEI 181
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 123/297 (41%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLE---YLPGGTV-SDLATTLNAYA----DEITLRSHTYCIVSALKYLHS 93
P +H E YL + DL T ++A A ++S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEVVT------LWYRAPEI 178
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L+ L + D L +S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPENLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEV 149
++H D+K +N+L+ + +KLADFG A G + T V LW APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEVVT------LWYRAPEI 181
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
SYE SSS L + + G + D T A +++ T RS ++ A+ +LH+ NIV
Sbjct: 168 SYE----SSSFMFLVFDLMRKGELFDYLTEKVALSEKET-RSIMRSLLEAVSFLHANNIV 222
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQ- 155
H D+K +N+L+ N ++L+DFG + G K++ G+P ++APE+++
Sbjct: 223 HRDLKPENILLDDNMQ-IRLSDFGFSCHLEP----GEKLRELCGTPGYLAPEILKCSMDE 277
Query: 156 -----GPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI---GFSDELPRFPTQSSELG 206
G E D+W+ G + ++ G P W L I + P + +SS +
Sbjct: 278 THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV- 336
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQ 234
+D + + L+ +P R + +Q L+HPF +
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 225
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 286 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL-VG 109
L +EY+ GG + D + E+ I ++++H I+H D+K +N+L V
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTII 169
++ +K+ DFG A + V G+P ++APEVV + +D+WS+G
Sbjct: 223 RDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279
Query: 170 EMVTG-KPAWEDFGANTLSRI-----GFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
+++G P D A TL+ I DE F S E ++F+ K L +E R S
Sbjct: 280 MLLSGLSPFLGDNDAETLNNILACRWDLEDE--EFQDISEE-AKEFISKLLIKEKSWRIS 336
Query: 224 CDQLLKHPFL 233
+ LKHP+L
Sbjct: 337 ASEALKHPWL 346
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 139 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 141 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 112/267 (41%), Gaps = 45/267 (16%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLE------------- 54
+ IG+G F V ++R G FA DV+ + S +L E
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 55 -----YLPGGTV---------SDLATTLNAYAD------EITLRSHTYCIVSALKYLHSR 94
Y G + +DL + AD E + I+ AL+Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 95 NIVHCDVKGKNVLVGP--NSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEV 149
NI+H DVK VL+ NS+ VKL FG A GE+ + G ++ G+P +MAPEV
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRV---GTPHFMAPEV 204
Query: 150 VRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGR 207
V+ E G DVW G + +++G + I G PR + SE +
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 208 DFLDKCLRREPGERWSCDQLLKHPFLQ 234
D + + L +P ER + + L HP+L+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 176 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 231
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 291
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 292 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L+ L + D L +S+ + ++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 125 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 180
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 240
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 241 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L+ L + D L +S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 140 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 137 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 179
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 240 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 134 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 181
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 242 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 181
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 242 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 165 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 134 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 152 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 138 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 131 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 186
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 246
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 247 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 134 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 132 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
++Y+ GG + L + + + + + + AL+YLHS++I++ D+K +N+L+ N
Sbjct: 85 MDYIEGGELFSLLRKSQRFPNPVA-KFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG 143
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+K+ DFG A V D V G+P ++APEVV + D WS G I EM+
Sbjct: 144 H-IKITDFGFA--KYVPD---VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197
Query: 173 TG-KPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW-----SCDQ 226
G P ++ T +I + EL RFP +E +D L + + R+ +R +
Sbjct: 198 AGYTPFYDSNTMKTYEKI-LNAEL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED 255
Query: 227 LLKHPFLQSV 236
+ HP+ + V
Sbjct: 256 VKNHPWFKEV 265
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 132 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 187
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 247
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 248 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 133 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L ++ + GG + D Y + R + ++ A+KYLH IVH D+K +N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 111 --NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
S + ++DFG + + D V G+P ++APEV+ + D WS+G
Sbjct: 152 LDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPR---FPTQSSELGRDFLDKCLRREPGERWSCD 225
++ G P + D L E + S+ +DF+ + ++P +R++C+
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 268
Query: 226 QLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
Q L+HP++ + D N S + ++ S++++
Sbjct: 269 QALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 130 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 185
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 245
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 246 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EYLP G + D A D L ++ I ++YL SR VH D+ +N+LV
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE- 148
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTII 169
+ + VK+ADFG A + V +P SP+ W APE + +SDVWS G +
Sbjct: 149 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
Query: 170 EMVT 173
E+ T
Sbjct: 209 ELFT 212
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 152 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EYLP G + D A D L ++ I ++YL SR VH D+ +N+LV
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE- 161
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTII 169
+ + VK+ADFG A + V +P SP+ W APE + +SDVWS G +
Sbjct: 162 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
Query: 170 EMVT 173
E+ T
Sbjct: 222 ELFT 225
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 140 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 195
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D+WSLG + ++ G P + G T R+G +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 255
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + + HP++
Sbjct: 256 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L ++ + GG + D Y + R + ++ A+KYLH IVH D+K +N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 111 --NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
S + ++DFG + + D V G+P ++APEV+ + D WS+G
Sbjct: 152 LDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPR---FPTQSSELGRDFLDKCLRREPGERWSCD 225
++ G P + D L E + S+ +DF+ + ++P +R++C+
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 268
Query: 226 QLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
Q L+HP++ + D N S + ++ S++++
Sbjct: 269 QALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L +EYLP G + D A D L ++ I ++YL SR VH D+ +N+LV
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE- 149
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTII 169
+ + VK+ADFG A + V +P SP+ W APE + +SDVWS G +
Sbjct: 150 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
Query: 170 EMVT 173
E+ T
Sbjct: 210 ELFT 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRN----------LHLEYLPGG 59
IG GSFGTV +++GDV + V P + RN +++ G
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 60 TVSDLATTLNAYADEITLRSHTYC----------------IVSALKYLHSRNIVHCDVKG 103
D + + + +L H + + YLH++NI+H D+K
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKS 160
Query: 104 KNVLVGPNSSFVKLADFGAAG-EATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP---ES 159
N+ + + VK+ DFG A ++ S ++ V+ QP GS LWMAPEV+R + P +S
Sbjct: 161 NNIFLHEGLT-VKIGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 160 DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGF-------SDELPRFPTQSSELGRDFLDK 212
DV+S G + E++TG+ + N +I F S +L + + + +
Sbjct: 219 DVYSYGIVLYELMTGELPYSHI--NNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 213 CLRREPGERWSCDQLL 228
C+++ ER Q+L
Sbjct: 277 CVKKVKEERPLFPQIL 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 112/288 (38%), Gaps = 67/288 (23%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA-------------------PTTSSSCRN 50
IG G++G V A ++ G+V A + E P
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHSRNIVHCDVK 102
+H E L L + D L +S+ + ++ L + HS ++H D+K
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK 129
Query: 103 GKNVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEVVRG-ECQGP 157
+N+L+ + +KLADFG A G + T V LW APE++ G +
Sbjct: 130 PQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEV------VTLWYRAPEILLGCKYYST 182
Query: 158 ESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL------------PRFPT 200
D+WSLGC EMVT + + D + L RI G DE+ P FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
Query: 201 QS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ E GR L + L +P +R S L HPF Q V+
Sbjct: 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I +A+++LHS NI H DVK +N+L + +KL DFG A E T + + P +
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT----PCYT 173
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT-------------LSR 188
P ++APEV+ E D+WSLG + ++ G P F +NT L +
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP---FYSNTGQAISPGMKRRIRLGQ 230
Query: 189 IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
GF + P + ++ SE + + L+ +P ER + Q + HP++
Sbjct: 231 YGFPN--PEW-SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 95/234 (40%), Gaps = 50/234 (21%)
Query: 5 VRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCR--------------- 49
+ G+ +G+G FG R G+V + + + ++ T + +
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 50 -----------NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
N EY+ GGT+ + ++++ S I S + YLHS NI+H
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDT-----RGVKIQPR-------GSPLWMA 146
D+ N LV N + V +ADFG A T R +K R G+P WMA
Sbjct: 132 RDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 147 PEVVRGECQGPESDVWSLG---CTIIEMVTGKPAW----EDFGANTLSRIGFSD 193
PE++ G + DV+S G C II V P + DFG N GF D
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR---GFLD 241
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I +A+++LHS NI H DVK +N+L + +KL DFG A E T + + P +
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT----PCYT 192
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT-------------LSR 188
P ++APEV+ E D+WSLG + ++ G P F +NT L +
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP---FYSNTGQAISPGMKRRIRLGQ 249
Query: 189 IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
GF + P + ++ SE + + L+ +P ER + Q + HP++
Sbjct: 250 YGFPN--PEW-SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L ++ + GG + D Y + R + ++ A+KYLH IVH D+K +N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 111 --NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
S + ++DFG + + D V G+P ++APEV+ + D WS+G
Sbjct: 152 LDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPR---FPTQSSELGRDFLDKCLRREPGERWSCD 225
++ G P + D L E + S+ +DF+ + ++P +R++C+
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 268
Query: 226 QLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEE 262
Q L+HP++ + D N S + ++ S++++
Sbjct: 269 QALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 122/297 (41%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 42 PTTSSSCRNLHLE---YLPGGTV-SDLATTLNAYA----DEITLRSHTYCIVSALKYLHS 93
P +H E YL V DL ++A A ++S+ + ++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 39 YEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+E PT S L LE + GG + D Y E I+ A+ YLH IVH
Sbjct: 117 FETPTEIS----LVLELVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 99 CDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQ 155
D+K +N+L P++ +K+ADFG + + + + + G+P + APE++RG
Sbjct: 172 RDLKPENLLYATPAPDAP-LKIADFGLS---KIVEHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 156 GPESDVWSLGCTIIEMVTG-KPAWEDFGANTLSRIGFSDELPRFPTQSSEL---GRDFLD 211
GPE D+WS+G ++ G +P +++ G + R + E E+ +D +
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR 287
Query: 212 KCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNS 258
K + +P +R + Q L+HP+ V+ AN V + + L N+
Sbjct: 288 KLIVLDPKKRLTTFQALQHPW---VTGKAANFVHMDTAQKKLQEFNA 331
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + +E R ++ I AL YLH R I++ D+K NVL+ +
Sbjct: 132 IEYVNGGDLMFHMQRQRKLPEEHA-RFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SE 189
Query: 113 SFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL D+G E DT G+P ++APE++RGE G D W+LG + EM
Sbjct: 190 GHIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 172 VTGKPAWEDFGA---------NTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
+ G+ ++ G+ + L ++ ++ R P S L L ++P ER
Sbjct: 247 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERL 305
Query: 223 SCD------QLLKHPFLQSV 236
C + HPF ++V
Sbjct: 306 GCHPQTGFADIQGHPFFRNV 325
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 137 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 124 HRVLHRDLKPENLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 4 WVRGKCIGRGSFGTVNVAVD------------RFNGDVFAYLGDDVSYEAPTTSSSCRNL 51
++ + +GRG FG V+ V+ + G + ++S + +L
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 52 H------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHC 99
H E++ G + + T +E + S+ + + AL++LHS NI H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 100 DVKGKNVLVGP-NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D++ +N++ SS +K+ +FG A + D + +P + APEV + +
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF---TAPEYYAPEVHQHDVVSTA 183
Query: 159 SDVWSLGCTIIEMVTG-KPAWEDFGANTLSRI---GFSDELPRFPTQSSELGRDFLDKCL 214
+D+WSLG + +++G P + + I ++ + F S E DF+D+ L
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE-AMDFVDRLL 242
Query: 215 RREPGERWSCDQLLKHPFLQS 235
+E R + + L+HP+L+
Sbjct: 243 VKERKSRMTASEALQHPWLKQ 263
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 117/297 (39%), Gaps = 67/297 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 122 HRVLHRDLKPENLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P FP + E GR L + L +P +R S L HPF Q V+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 95 NLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 210
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 211 CVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + +E R ++ I AL YLH R I++ D+K NVL+ +
Sbjct: 100 IEYVNGGDLMFHMQRQRKLPEEHA-RFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SE 157
Query: 113 SFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL D+G E DT G+P ++APE++RGE G D W+LG + EM
Sbjct: 158 GHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 172 VTGKPAWEDFGA---------NTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
+ G+ ++ G+ + L ++ ++ R P S L L ++P ER
Sbjct: 215 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSMSVKAASVLKSFLNKDPKERL 273
Query: 223 SC------DQLLKHPFLQSV 236
C + HPF ++V
Sbjct: 274 GCLPQTGFADIQGHPFFRNV 293
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + +E R ++ I AL YLH R I++ D+K NVL+ +
Sbjct: 85 IEYVNGGDLMFHMQRQRKLPEEHA-RFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SE 142
Query: 113 SFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL D+G E DT G+P ++APE++RGE G D W+LG + EM
Sbjct: 143 GHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 172 VTGKPAWEDFGA---------NTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
+ G+ ++ G+ + L ++ ++ R P S L L ++P ER
Sbjct: 200 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERL 258
Query: 223 SCD------QLLKHPFLQSVS 237
C + HPF ++V
Sbjct: 259 GCHPQTGFADIQGHPFFRNVD 279
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 110 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 168
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 169 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
Query: 172 VTGK----------------------------------PAWEDFGANTLSRIGFSDEL-- 195
G+ FG ++ + + L
Sbjct: 224 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDY 283
Query: 196 ------PRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 284 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 336
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + +E R ++ I AL YLH R I++ D+K NVL+ +
Sbjct: 89 IEYVNGGDLMFHMQRQRKLPEEHA-RFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SE 146
Query: 113 SFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL D+G E DT G+P ++APE++RGE G D W+LG + EM
Sbjct: 147 GHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 172 VTGKPAWEDFGA---------NTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
+ G+ ++ G+ + L ++ ++ R P S L L ++P ER
Sbjct: 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERL 262
Query: 223 SCD------QLLKHPFLQSVS 237
C + HPF ++V
Sbjct: 263 GCHPQTGFADIQGHPFFRNVD 283
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L ++ + GG + D Y + R + ++ A+KYLH IVH D+K +N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 111 --NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
S + ++DFG + + D V G+P ++APEV+ + D WS+G
Sbjct: 152 LDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 169 IEMVTGKPAWEDFGANTLSRIGFSDELPR---FPTQSSELGRDFLDKCLRREPGERWSCD 225
++ G P + D L E + S+ +DF+ + ++P +R++C+
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 268
Query: 226 QLLKHPFLQSVSPSDANT 243
Q L+HP++ + D N
Sbjct: 269 QALQHPWIAGDTALDKNI 286
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 48 CRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
C L +EY+ G T+S+ + + + T + T I+ +K+ H IVH D+K +N+L
Sbjct: 85 CYYLVMEYIEGPTLSEYIESHGPLSVD-TAINFTNQILDGIKHAHDMRIVHRDIKPQNIL 143
Query: 108 VGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSL 164
+ N + K+ DFG A E +++ T V G+ + +PE +GE +D++S+
Sbjct: 144 IDSNKTL-KIFDFGIAKALSETSLTQTNHV----LGTVQYFSPEQAKGEATDECTDIYSI 198
Query: 165 GCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQ-SSELGRDFLDKCLR---REPGE 220
G + EM+ G+P + A +++ D +P T ++ + + LR ++
Sbjct: 199 GIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKAN 258
Query: 221 RWSCDQLLK 229
R+ Q +K
Sbjct: 259 RYKTIQEMK 267
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL LEY+P S L + ++ + Y ++ +L Y+HS I H D+K +N+L
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173
Query: 108 VGPNSSFVKLADFGA-----AGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DV 161
+ P S +KL DFG+ AGE VS S + APE++ G + D+
Sbjct: 174 LDPPSGVLKLIDFGSAKILIAGEPNVSXI--------CSRYYRAPELIFGATNYTTNIDI 225
Query: 162 WSLGCTIIEMVTGKPAWE-DFGANTLSRI------------------GFSDELPRF-PTQ 201
WS GC + E++ G+P + + G + L I + P+ P
Sbjct: 226 WSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP 285
Query: 202 SSELGR--------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVL 253
S++ R D + + L P R + + L HPF + +A +
Sbjct: 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLF 345
Query: 254 DWVNSEF 260
+W E
Sbjct: 346 NWTKEEL 352
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 187
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 244
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 245 CVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 115/294 (39%), Gaps = 67/294 (22%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA------------------- 41
M ++ + + IG G++G V A ++ G+V A + E
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITL--------RSHTYCIVSALKYLHS 93
P +H E L L + D L +S+ + ++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-APEV 149
++H D+K +N+L+ + +KLADFG A GV ++ LW APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGA-IKLADFGLA------RAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 150 VRG-ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRI----GFSDEL-------- 195
+ G + D+WSLGC EMVT + + D + L RI G DE+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 196 ----PRFPTQS-----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
P FP + E GR L + L +P +R S L HPF Q
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 107 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 222
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 223 CVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL L+Y+P V+ + I ++ + Y + +L Y+HS I H D+K +N+L
Sbjct: 96 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 155
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGC 166
+ P+++ +KL DFG+A + + I R + APE++ G S DVWS GC
Sbjct: 156 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAGC 212
Query: 167 TIIEMVTGKPAWE-DFGANTLSRI 189
+ E++ G+P + D G + L I
Sbjct: 213 VLAELLLGQPIFPGDSGVDQLVEI 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL L+Y+P V+ + I ++ + Y + +L Y+HS I H D+K +N+L
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGC 166
+ P+++ +KL DFG+A + + I R + APE++ G S DVWS GC
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 167 TIIEMVTGKPAWE-DFGANTLSRI 189
+ E++ G+P + D G + L I
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 114 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 172
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 173 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 229
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 230 CVLAELLLGQPIFPGDSGVDQLVEI 254
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 53/260 (20%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L ++ D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 111 ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 169
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A+ + + R + APEV+ G D+WS+GC + E+V G
Sbjct: 170 LARTASTNFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 175 ------------------------KPAWEDFGANTLSR--IGFSDELPR--FPTQS---- 202
+P ++ N + I F + P FP++S
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDK 286
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L +P +R S D+ L+HP++ P++ AE+ P + D ++
Sbjct: 287 IKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE----AEAPPPQIYD---AQ 339
Query: 260 FEEEGTSDDEKLEASARERM 279
EE + +E E +E M
Sbjct: 340 LEEREHAIEEWKELIYKEVM 359
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 107 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 222
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 223 CVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 99 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 157
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 158 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 214
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 215 CVLAELLLGQPIFPGDSGVDQLVEI 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL L+Y+P V+ + I ++ + Y + +L Y+HS I H D+K +N+L
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGC 166
+ P+++ +KL DFG+A + + I R + APE++ G S DVWS GC
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 167 TIIEMVTGKPAWE-DFGANTLSRI 189
+ E++ G+P + D G + L I
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L EYLP G++ D D I L +T I ++YL ++
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H ++ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 135 RYIHRNLATRNILV-ENENRVKIGDFGLT-KVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY---------LGDDVSYEAPTTSSSCRNLH------ 52
K +G+G+FG V + ++ G +A D+V++ + H
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS-RNIVH 98
+EY GG + + ++++ R + IVSAL YLHS +N+V+
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHSEKNVVY 275
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K +N+++ + +K+ DFG E + D +K G+P ++APEV+ G
Sbjct: 276 RDLKLENLMLDKDGH-IKITDFGLCKEG-IKDGATMKTFC-GTPEYLAPEVLEDNDYGRA 332
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W LG + EM+ G+ + + L + +E+ RFP + L L+++P
Sbjct: 333 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDP 391
Query: 219 GERW-----SCDQLLKHPFLQSV 236
+R ++++H F +
Sbjct: 392 KQRLGGGSEDAKEIMQHRFFAGI 414
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL L+Y+P V+ + I ++ + Y + +L Y+HS I H D+K +N+L
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGC 166
+ P+++ +KL DFG+A + + I R + APE++ G S DVWS GC
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 167 TIIEMVTGKPAWE-DFGANTLSRI 189
+ E++ G+P + D G + L I
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 103 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 161
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 162 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIFGATDYTSSIDVWSAG 218
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 219 CVLAELLLGQPIFPGDSGVDQLVEI 243
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 187
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 244
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 245 CVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 131 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 189
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 190 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 246
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 247 CVLAELLLGQPIFPGDSGVDQLVEI 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 133 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 191
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 192 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 248
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 249 CVLAELLLGQPIFPGDSGVDQLVEI 273
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 50 NLHLEYLPGGT--VSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
NL L+Y+P V+ + I ++ + Y + +L Y+HS I H D+K +N+L
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGC 166
+ P+++ +KL DFG+A + + I R + APE++ G S DVWS GC
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 167 TIIEMVTGKPAWE-DFGANTLSRI 189
+ E++ G+P + D G + L I
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 145 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 203
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 204 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
Query: 172 VTGK-----PAWED----FGANT-----------------LSRIGF-------------- 191
G+ P ++ FG LS G
Sbjct: 259 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 318
Query: 192 --SDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
++ P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 319 IVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 371
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEI---TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
L ++Y GG DL T L+ + D++ R + +V A+ +H + VH D+K NVL
Sbjct: 167 LVMDYYVGG---DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL 223
Query: 108 VGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGE-----CQGPE 158
+ N ++LADFG+ + TV + V G+P +++PE+++ GPE
Sbjct: 224 LDVNGH-IRLADFGSCLKMNDDGTVQSSVAV-----GTPDYISPEILQAMEDGMGKYGPE 277
Query: 159 SDVWSLGCTIIEMVTGK-PAWEDFGANTLSRIGFSDELPRFP---TQSSELGRDFLDK-- 212
D WSLG + EM+ G+ P + + T +I +E +FP T SE +D + +
Sbjct: 278 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
Query: 213 CLRREPGERWSCDQLLKHPFLQSVS 237
C R + + KH F + ++
Sbjct: 338 CSRERRLGQNGIEDFKKHAFFEGLN 362
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY---------LGDDVSYEAPTTSSSCRNLH------ 52
K +G+G+FG V + ++ G +A D+V++ + H
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS-RNIVH 98
+EY GG + + ++++ R + IVSAL YLHS +N+V+
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHSEKNVVY 272
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K +N+++ + +K+ DFG E + D +K G+P ++APEV+ G
Sbjct: 273 RDLKLENLMLDKDGH-IKITDFGLCKEG-IKDGATMKTFC-GTPEYLAPEVLEDNDYGRA 329
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W LG + EM+ G+ + + L + +E+ RFP + L L+++P
Sbjct: 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDP 388
Query: 219 GERW-----SCDQLLKHPFLQSV 236
+R ++++H F +
Sbjct: 389 KQRLGGGSEDAKEIMQHRFFAGI 411
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 123 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 181
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 182 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 238
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 239 CVLAELLLGQPIFPGDSGVDQLVEI 263
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 108 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 166
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 167 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 223
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 224 CVLAELLLGQPIFPGDSGVDQLVEI 248
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 95 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 210
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 211 CVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 174 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 232
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 233 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 289
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 290 CVLAELLLGQPIFPGDSGVDQLVEI 314
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEI---TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
L ++Y GG DL T L+ + D++ R + +V A+ +H + VH D+K NVL
Sbjct: 151 LVMDYYVGG---DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL 207
Query: 108 VGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGE-----CQGPE 158
+ N ++LADFG+ + TV + V G+P +++PE+++ GPE
Sbjct: 208 LDVNGH-IRLADFGSCLKMNDDGTVQSSVAV-----GTPDYISPEILQAMEDGMGKYGPE 261
Query: 159 SDVWSLGCTIIEMVTGK-PAWEDFGANTLSRIGFSDELPRFP---TQSSELGRDFLDK-- 212
D WSLG + EM+ G+ P + + T +I +E +FP T SE +D + +
Sbjct: 262 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
Query: 213 CLRREPGERWSCDQLLKHPFLQSVS 237
C R + + KH F + ++
Sbjct: 322 CSRERRLGQNGIEDFKKHAFFEGLN 346
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 124 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLC 182
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 183 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 238
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 239 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLC 178
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 179 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 234
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 235 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 23/199 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I+ A++Y H IVH D+K +N+L+ N + VK+ADFG + ++D +K GSP
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLN-VKIADFGLSN--IMTDGNFLKTSC-GSPN 172
Query: 144 WMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWED-FGANTLSRIGFSDELPRFPTQ 201
+ APEV+ G+ GPE DVWS G + M+ G+ ++D F N ++ + P
Sbjct: 173 YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV--MPDF 230
Query: 202 SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFE 261
S + + + + +P +R + ++ + P+ P D++ E
Sbjct: 231 LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP---------------DYLRPMEE 275
Query: 262 EEGTSDDEKLEASARERMG 280
+G+ D ++ + E MG
Sbjct: 276 VQGSYADSRIVSKLGEAMG 294
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 100 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 158
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 159 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 215
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 216 CVLAELLLGQPIFPGDSGVDQLVEI 240
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 43/263 (16%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDV-----SYEAPTTSS---SCRNLHLEYLPG 58
G + RG F +VAV R + F++ +V S E P + ++ +Y+
Sbjct: 38 GTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI-- 95
Query: 59 GTVSDLATTLNAYADE----------ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
+ A TL Y ++ ITL T S L +LHS NIVH D+K N+L+
Sbjct: 96 -AIELCAATLQEYVEQKDFAHLGLEPITLLQQT---TSGLAHLHSLNIVHRDLKPHNILI 151
Query: 109 G-PNSS---FVKLADFG-----AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES 159
PN+ ++DFG A G + S GV G+ W+APE++ +C+ +
Sbjct: 152 SMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP----GTEGWIAPEMLSEDCKENPT 207
Query: 160 ---DVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSE-LGRDFLDKC 213
D++S GC +++ P + +G P + + + R+ ++K
Sbjct: 208 YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKM 267
Query: 214 LRREPGERWSCDQLLKHPFLQSV 236
+ +P +R S +LKHPF S+
Sbjct: 268 IAMDPQKRPSAKHVLKHPFFWSL 290
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADE---ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
NL L+Y+P TV +A + I ++ + Y + +L Y+HS I H D+K +N+
Sbjct: 95 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLG 165
L+ P+++ +KL DFG+A + + I R + APE++ G S DVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIFGATDYTSSIDVWSAG 210
Query: 166 CTIIEMVTGKPAWE-DFGANTLSRI 189
C + E++ G+P + D G + L I
Sbjct: 211 CVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLC 178
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 179 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 234
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 235 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 142 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 172 VTGK-----PAWED----FGANT-----------------LSRIGF-------------- 191
G+ P ++ FG LS G
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256
Query: 192 --SDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
++ P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 142 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 172 VTGK-----PAWED----FGANT-----------------LSRIGF-------------- 191
G+ P ++ FG LS G
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256
Query: 192 --SDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
++ P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 309
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++K+ADFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++K+ADFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLC 176
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 177 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 232
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 142 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 172 VTGK-----PAWED----FGANT-----------------LSRIGF-------------- 191
G+ P ++ FG LS G
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256
Query: 192 --SDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
++ P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 309
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V +++ +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + ++I L + ++ L YL ++ I+H DVK N+LV
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +M+PE ++G +SD+WS+G +++EM
Sbjct: 142 GE-IKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 172 VTGK-----PAWED----FGANT-----------------LSRIGF-------------- 191
G+ P ++ FG LS G
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256
Query: 192 --SDELPRFPTQSSELG-RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTV 244
++ P+ P+ L +DF++KCL + P ER QL+ H F++ SDA V
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 309
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 142 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLC 200
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 201 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 256
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 257 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 295
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 37 VSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSR 94
V Y+ S+ RNL L E+LP G++ + D I L +T I ++YL ++
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 95 NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPL-WMAPEVVRG 152
+H D+ +N+LV N + VK+ DFG + D K+ +P SP+ W APE +
Sbjct: 137 RYIHRDLATRNILV-ENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 153 ECQGPESDVWSLGCTIIEMVT 173
SDVWS G + E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 38/200 (19%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRG 140
Y I+ LKY+HS N++H D+K N+L+ +K+ DFG A A D G +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCD-LKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEM---------------------VTGKPAW 178
+ + APE++ +S D+WS+GC + EM + G P+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 179 EDFG--ANTLSRIGFSDELPR---------FPTQSSELGRDFLDKCLRREPGERWSCDQL 227
ED N +R + LP FP S+ D LD+ L P +R + ++
Sbjct: 270 EDLNCIINMKAR-NYLQSLPSKTKVAWAKLFPKSDSK-ALDLLDRMLTFNPNKRITVEEA 327
Query: 228 LKHPFL-QSVSPSDANTVAE 246
L HP+L Q P+D E
Sbjct: 328 LAHPYLEQYYDPTDEPVAEE 347
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ ++ + H IVH D+K +N+L+ S + VKLADFG A E V + G+
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFGFAGT 169
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R + G D+W+ G + ++ G P + D + L + + P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E +D ++K L P +R + + LKHP++
Sbjct: 230 WDTVTPE-AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + IV +YLH ++H D+K N+ + + VK+ DFG A + R +
Sbjct: 144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLC 202
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELP 196
G+P ++APEV+ + E DVWS+GC + ++ GKP +E T RI ++
Sbjct: 203 --GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-- 258
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
P + + + K L+ +P R + ++LL F S
Sbjct: 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSR-NIVHCDVKGKNVLVGPNSSFVKLADFGAAG 124
+ L+ E L T V AL +L I+H D+K N+L+ S +KL DFG +G
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISG 174
Query: 125 EA--TVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE--SDVWSLGCTIIEMVTGK---PA 177
+ +++ TR +P +P + P R QG + SDVWSLG T+ E+ TG+ P
Sbjct: 175 QLVDSIAKTRDAGCRPYMAPERIDPSASR---QGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 178 WEDFGANTLSRIGFSDELPRFPTQSSELGR---DFLDKCLRREPGERWSCDQLLKHPFL 233
W + L+++ D ++ E +F++ CL ++ +R +LLKHPF+
Sbjct: 232 WNSV-FDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY---------LGDDVSYEAPTTSSSCRNLH------ 52
K +G+G+FG V + ++ G +A D+V++ + H
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS-RNIVH 98
+EY GG + + ++++ R + IVSAL YLHS +N+V+
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHSEKNVVY 132
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K +N+++ + +K+ DFG E + D +K G+P ++APEV+ G
Sbjct: 133 RDLKLENLMLDKDGH-IKITDFGLCKEG-IKDGATMKXFC-GTPEYLAPEVLEDNDYGRA 189
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W LG + EM+ G+ + + L + +E+ RFP + L L+++P
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDP 248
Query: 219 GERW-----SCDQLLKHPFLQSV 236
+R ++++H F +
Sbjct: 249 KQRLGGGSEDAKEIMQHRFFAGI 271
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V +++ +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K IG GSFG V + G+ +A D V
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++K+ADFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 53/260 (20%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L ++ D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A + + R + APEV+ G D+WS+GC + E+V G
Sbjct: 172 LARTACTNFMMTPYVVTR---YYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 175 ------------------------KPAWEDFGAN--TLSRIGFSDELPR--FPTQS---- 202
+P ++ N I F + P FP++S
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L +P +R S D+ L+HP++ P++ AE+ P + D ++
Sbjct: 289 IKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE----AEAPPPQIYD---AQ 341
Query: 260 FEEEGTSDDEKLEASARERM 279
EE + +E E +E M
Sbjct: 342 LEEREHAIEEWKELIYKEVM 361
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 54 EYLPGGTVSDLATTLNAYAD-EITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV---G 109
E + GG + D +++ E + HT I ++YLHS+ +VH D+K N+L
Sbjct: 101 ELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYLHSQGVVHRDLKPSNILYVDES 158
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTII 169
N +++ DFG A + + G+ + P + ++APEV++ + D+WSLG +
Sbjct: 159 GNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLY 216
Query: 170 EMVTGKPAWEDFGANT----LSRIG---FSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
M+ G + + ++T L+RIG F+ + T SE +D + K L +P +R
Sbjct: 217 TMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT-VSETAKDLVSKMLHVDPHQRL 275
Query: 223 SCDQLLKHPFL 233
+ Q+L+HP++
Sbjct: 276 TAKQVLQHPWV 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ ++ + H IVH D+K +N+L+ S + VKLADFG A E V + G+
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFGFAGT 169
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R + G D+W+ G + ++ G P + D + L + + P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E +D ++K L P +R + + LKHP++
Sbjct: 230 WDTVTPE-AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY---------LGDDVSYEAPTTSSSCRNLH------ 52
K +G+G+FG V + ++ G +A D+V++ + H
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS-RNIVH 98
+EY GG + + ++++ R + IVSAL YLHS +N+V+
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHSEKNVVY 133
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K +N+++ + +K+ DFG E + D +K G+P ++APEV+ G
Sbjct: 134 RDLKLENLMLDKDGH-IKITDFGLCKEG-IKDGATMKXFC-GTPEYLAPEVLEDNDYGRA 190
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W LG + EM+ G+ + + L + +E+ RFP + L L+++P
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDP 249
Query: 219 GERW-----SCDQLLKHPFLQSV 236
+R ++++H F +
Sbjct: 250 KQRLGGGSEDAKEIMQHRFFAGI 272
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 54 EYLPGGTVSDLATTLNAYAD-EITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV---G 109
E + GG + D +++ E + HT I ++YLHS+ +VH D+K N+L
Sbjct: 101 ELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYLHSQGVVHRDLKPSNILYVDES 158
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTII 169
N +++ DFG A + + G+ + P + ++APEV++ + D+WSLG +
Sbjct: 159 GNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLY 216
Query: 170 EMVTGKPAWEDFGANT----LSRIG---FSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
M+ G + + ++T L+RIG F+ + T SE +D + K L +P +R
Sbjct: 217 TMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT-VSETAKDLVSKMLHVDPHQRL 275
Query: 223 SCDQLLKHPFL 233
+ Q+L+HP++
Sbjct: 276 TAKQVLQHPWV 286
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V +++ +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + LEY PGG + + ++ E R + IV +YLHS ++
Sbjct: 105 VKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 163
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++K+ADFG A +G G+P ++APE++ +
Sbjct: 164 IYRDLKPENLLID-QQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 275
Query: 216 REPGERW 222
+ +R+
Sbjct: 276 VDLTKRF 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVS-------- 38
+V G +G G+FG V + + G DV + ++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 39 -----YEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS 93
Y+ +T + + +EY+ GG + D + +E+ R I+SA+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMV-MEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHR 129
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
+VH D+K +NVL+ + + K+ADFG + +SD ++ GSP + APEV+ G
Sbjct: 130 HMVVHRDLKPENVLLDAHMN-AKIADFGLSN--MMSDGEFLRTSC-GSPNYAAPEVISGR 185
Query: 154 CQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFL 210
GPE D+WS G + ++ G ++D TL + G +P + +S L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA---TLL 242
Query: 211 DKCLRREPGERWSCDQLLKHPFLQSVSPS 239
L+ +P +R + + +H + + PS
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPS 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAY---------LGDDVSYEAPTTSSSCRNLH------ 52
K +G+G+FG V + ++ G +A D+V++ + H
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 53 -------------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS-RNIVH 98
+EY GG + + ++++ R + IVSAL YLHS +N+V+
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHSEKNVVY 134
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPE 158
D+K +N+++ + +K+ DFG E + D +K G+P ++APEV+ G
Sbjct: 135 RDLKLENLMLDKDGH-IKITDFGLCKEG-IKDGATMKXFC-GTPEYLAPEVLEDNDYGRA 191
Query: 159 SDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREP 218
D W LG + EM+ G+ + + L + +E+ RFP + L L+++P
Sbjct: 192 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDP 250
Query: 219 GERW-----SCDQLLKHPFLQSV 236
+R ++++H F +
Sbjct: 251 KQRLGGGSEDAKEIMQHRFFAGI 273
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVS-------- 38
+V G +G G+FG V + + G DV + ++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 39 -----YEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS 93
Y+ +T + + +EY+ GG + D + +E+ R I+SA+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMV-MEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHR 129
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
+VH D+K +NVL+ + + K+ADFG + +SD ++ GSP + APEV+ G
Sbjct: 130 HMVVHRDLKPENVLLDAHMN-AKIADFGLSN--MMSDGEFLR-DSCGSPNYAAPEVISGR 185
Query: 154 CQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFL 210
GPE D+WS G + ++ G ++D TL + G +P + +S L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA---TLL 242
Query: 211 DKCLRREPGERWSCDQLLKHPFLQSVSPS 239
L+ +P +R + + +H + + PS
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPS 271
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLV---GPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
+ I ++YLH++ +VH D+K N+L N +++ DFG A + + G+ + P
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTP 180
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW----EDFGANTLSRIG---F 191
+ ++APEV+ + D+WSLG + M+TG + +D L+RIG F
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240
Query: 192 SDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
S + S+ +D + K L +P +R + +L+HP++
Sbjct: 241 SLS-GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 28/244 (11%)
Query: 10 IGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVSYEAPTTSSSCR---- 49
+GRGSFG V+ D+ G ++ A G P +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 141
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
N+ +E L GG++ L + ++ L + + L+YLH+R I+H DVK NVL+
Sbjct: 142 NIFMELLEGGSLGQLIKQMGCLPEDRAL-YYLGQALEGLEYLHTRRILHGDVKADNVLLS 200
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQP----RGSPLWMAPEVVRGECQGPESDVWSLG 165
+ S L DFG A D G + G+ MAPEVV G+ + D+WS
Sbjct: 201 SDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 259
Query: 166 CTIIEMVTGKPAWEDF--GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
C ++ M+ G W + G L + P + L + + LR+EP R S
Sbjct: 260 CMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 319
Query: 224 CDQL 227
+L
Sbjct: 320 AMEL 323
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 28/244 (11%)
Query: 10 IGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVSYEAPTTSSSCR---- 49
+GRGSFG V+ D+ G ++ A G P +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 125
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
N+ +E L GG++ L + ++ L + + L+YLH+R I+H DVK NVL+
Sbjct: 126 NIFMELLEGGSLGQLIKQMGCLPEDRAL-YYLGQALEGLEYLHTRRILHGDVKADNVLLS 184
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQP----RGSPLWMAPEVVRGECQGPESDVWSLG 165
+ S L DFG A D G + G+ MAPEVV G+ + D+WS
Sbjct: 185 SDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Query: 166 CTIIEMVTGKPAWEDF--GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
C ++ M+ G W + G L + P + L + + LR+EP R S
Sbjct: 244 CMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 303
Query: 224 CDQL 227
+L
Sbjct: 304 AMEL 307
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPN--SSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ A+ + H +VH D+K +N+L+ + VKLADFG A E V + G+
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGDQQAWFGFAGT 169
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R E G D+W+ G + ++ G P + D + L + + P
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 229
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E ++ +++ L P +R + + LKHP++
Sbjct: 230 WDTVTPE-AKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + Y+H IVH D+K +N+L+ S + +++ DFG + S KI G+
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GT 191
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDEL 195
++APEV+ G + DVWS G + +++G P + GAN L ++ ++ EL
Sbjct: 192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFEL 248
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLD 254
P++ + SE +D + K L P R S L H ++Q+ + + S +L+
Sbjct: 249 PQWK-KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN 306
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ FA D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 28/244 (11%)
Query: 10 IGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVSYEAPTTSSSCR---- 49
+GRGSFG V+ D+ G ++ A G P +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 139
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
N+ +E L GG++ L + ++ L + + L+YLH+R I+H DVK NVL+
Sbjct: 140 NIFMELLEGGSLGQLIKQMGCLPEDRAL-YYLGQALEGLEYLHTRRILHGDVKADNVLLS 198
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQP----RGSPLWMAPEVVRGECQGPESDVWSLG 165
+ S L DFG A D G + G+ MAPEVV G+ + D+WS
Sbjct: 199 SDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 257
Query: 166 CTIIEMVTGKPAWEDF--GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
C ++ M+ G W + G L + P + L + + LR+EP R S
Sbjct: 258 CMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 317
Query: 224 CDQL 227
+L
Sbjct: 318 AMEL 321
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
I A++YLHS NI H DVK +N+L PN + +KL DFG A E T ++ P
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETTSHNSLTT---PCY 225
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSD 193
+P ++APEV+ E D WSLG ++ G P + G T R G +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYE 285
Query: 194 ELPRFP----TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
FP ++ SE + + L+ EP +R + + HP++
Sbjct: 286 ----FPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ FA D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ FA D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 34/254 (13%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYL---------GDDVSYEAPTTS----SSCRNLH---- 52
+G G+FG V+ +R G+ FA + V E T S + NLH
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 53 --------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
E++ GG + + + E + + L ++H N VH D+K +
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 105 NVL-VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
N++ S+ +KL DFG A + + VK+ G+ + APEV G+ G +D+WS
Sbjct: 285 NIMFTTKRSNELKLIDFGLT--AHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWS 341
Query: 164 LGCTIIEMVTG-KPAWEDFGANTLSRIGFSD---ELPRFPTQSSELGRDFLDKCLRREPG 219
+G +++G P + TL + D + F + SE G+DF+ K L +P
Sbjct: 342 VGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF-SGISEDGKDFIRKLLLADPN 400
Query: 220 ERWSCDQLLKHPFL 233
R + Q L+HP+L
Sbjct: 401 TRMTIHQALEHPWL 414
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + Y+H IVH D+K +N+L+ S + +++ DFG + S KI G+
Sbjct: 159 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GT 215
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDEL 195
++APEV+ G + DVWS G + +++G P + GAN L ++ ++ EL
Sbjct: 216 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFEL 272
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLD 254
P++ + SE +D + K L P R S L H ++Q+ + + S +L+
Sbjct: 273 PQWK-KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN 330
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S ++ R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPEVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNA 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + Y+H IVH D+K +N+L+ S + +++ DFG + S KI G+
Sbjct: 158 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GT 214
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDEL 195
++APEV+ G + DVWS G + +++G P + GAN L ++ ++ EL
Sbjct: 215 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFEL 271
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLD 254
P++ + SE +D + K L P R S L H ++Q+ + + S +L+
Sbjct: 272 PQWK-KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN 329
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 34/254 (13%)
Query: 10 IGRGSFGTVNVAVDRFNGDVFAYL---------GDDVSYEAPTTS----SSCRNLH---- 52
+G G+FG V+ +R G+ FA + V E T S + NLH
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 53 --------LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
E++ GG + + + E + + L ++H N VH D+K +
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 105 NVL-VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
N++ S+ +KL DFG A + + VK+ G+ + APEV G+ G +D+WS
Sbjct: 179 NIMFTTKRSNELKLIDFGLT--AHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWS 235
Query: 164 LGCTIIEMVTG-KPAWEDFGANTLSRIGFSD---ELPRFPTQSSELGRDFLDKCLRREPG 219
+G +++G P + TL + D + F + SE G+DF+ K L +P
Sbjct: 236 VGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF-SGISEDGKDFIRKLLLADPN 294
Query: 220 ERWSCDQLLKHPFL 233
R + Q L+HP+L
Sbjct: 295 TRMTIHQALEHPWL 308
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R + ++ ++YLH + I+H D+K N+LVG + +K+ADFG + E SD +
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFKGSD--ALLSN 196
Query: 138 PRGSPLWMAPEVV---RGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDE 194
G+P +MAPE + R G DVW++G T+ V G+ + D L S
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA 256
Query: 195 LPRFPTQS--SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
L FP Q +E +D + + L + P R ++ HP++
Sbjct: 257 L-EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNG----------------DVFAYLGDDVS-------- 38
++ G +G G+FG V V G DV + ++
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 39 -----YEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHS 93
Y+ +T S + +EY+ GG + D N DE R I+S + Y H
Sbjct: 77 HIIKLYQVISTPSDIFMV-MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHR 134
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
+VH D+K +NVL+ + + K+ADFG + +SD ++ GSP + APEV+ G
Sbjct: 135 HMVVHRDLKPENVLLDAHMN-AKIADFGLSN--MMSDGEFLRXSC-GSPNYAAPEVISGR 190
Query: 154 CQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDK 212
GPE D+WS G + ++ G ++D TL + D + P + L
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK-KICDGIFYTPQYLNPSVISLLKH 249
Query: 213 CLRREPGERWSCDQLLKHPFLQSVSPS 239
L+ +P +R + + +H + + P
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPK 276
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + Y+H IVH D+K +N+L+ S + +++ DFG + S KI G+
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GT 197
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDEL 195
++APEV+ G + DVWS G + +++G P + GAN L ++ ++ EL
Sbjct: 198 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFEL 254
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P++ + SE +D + K L P R S L H ++Q+ +
Sbjct: 255 PQWK-KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 295
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 53 LEYLPGGTVSDL---ATTLNAYADE-ITLRSHTYCIVSALKYLHSRN-----IVHCDVKG 103
+EY GG ++ + T Y DE LR T + ALK H R+ ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSDGGHTVLHRDLKP 144
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NV + + VKL DFG A DT K G+P +M+PE + +SD+WS
Sbjct: 145 ANVFLDGKQN-VKLGDFGLA-RILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LGC + E+ P + F L+ + R P + S+ + + + L + R S
Sbjct: 202 LGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 224 CDQLLKHPFL 233
+++L++P +
Sbjct: 262 VEEILENPLI 271
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 114 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 172
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 173 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 230 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 289
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 290 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 349
Query: 260 FEE 262
EE
Sbjct: 350 IEE 352
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 53 LEYLPGGTVSDL---ATTLNAYADE-ITLRSHTYCIVSALKYLHSRN-----IVHCDVKG 103
+EY GG ++ + T Y DE LR T + ALK H R+ ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSDGGHTVLHRDLKP 144
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NV + + VKL DFG A ++ + G+P +M+PE + +SD+WS
Sbjct: 145 ANVFLDGKQN-VKLGDFGLA--RILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LGC + E+ P + F L+ + R P + S+ + + + L + R S
Sbjct: 202 LGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 224 CDQLLKHPFL 233
+++L++P +
Sbjct: 262 VEEILENPLI 271
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPN--SSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ A+ + H +VH D+K +N+L+ + VKLADFG A E V + G+
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGT 187
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R + G D+W+ G + ++ G P + D + L + + P
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 247
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ T + E +D ++K L P +R + + LKHP++ S
Sbjct: 248 WDTVTPE-AKDLINKMLTINPSKRITAAEALKHPWISHRS 286
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S ++ R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMEPEVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
P ++ N G+S E P FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 53 LEYLPGGTVSDL---ATTLNAYADE-ITLRSHTYCIVSALKYLHSRN-----IVHCDVKG 103
+EY GG ++ + T Y DE LR T + ALK H R+ ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSDGGHTVLHRDLKP 144
Query: 104 KNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NV + + VKL DFG A DT K G+P +M+PE + +SD+WS
Sbjct: 145 ANVFLDGKQN-VKLGDFGLA-RILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
LGC + E+ P + F L+ + R P + S+ + + + L + R S
Sbjct: 202 LGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 224 CDQLLKHPFL 233
+++L++P +
Sbjct: 262 VEEILENPLI 271
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 56 LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPNSSF 114
L G L + E L T IV AL YL ++ ++H DVK N+L+
Sbjct: 105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ- 163
Query: 115 VKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRG-ECQGPE----SDVWSLGCTII 169
+KL DFG +G V D K + G +MAPE + + P+ +DVWSLG +++
Sbjct: 164 IKLCDFGISGR-LVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220
Query: 170 EMVTGKPAWEDFGAN--TLSRIGFSDELPRFPTQSSELG--RDFLDKCLRREPGERWSCD 225
E+ TG+ +++ + L+++ +E P P G + F+ CL ++ +R +
Sbjct: 221 ELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN 279
Query: 226 QLLKHPFLQ 234
+LL+H F++
Sbjct: 280 KLLEHSFIK 288
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 84 IVSALKYLHSR-NIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI--QPRG 140
IV AL++LHS+ +++H DVK NVL+ VK DFG +G + + +P
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGA--NTLSRIGFSDELPRF 198
+P + PE+ + +SD+WSLG T IE+ + ++ +G L ++ + P+
Sbjct: 204 APERINPEL-NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV-VEEPSPQL 261
Query: 199 PTQ--SSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
P S+E DF +CL++ ER + +L +HPF
Sbjct: 262 PADKFSAEF-VDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 164
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 165 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 276
Query: 217 EPGERW 222
+ +R+
Sbjct: 277 DLTKRF 282
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 87 ALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMA 146
AL +LHS+ +VH DVK N+ +GP KL DFG E + V+ G P +MA
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVELGTAGAGEVQ---EGDPRYMA 224
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMV------TGKPAWEDFGANTLSRIGFSDELPRFPT 200
PE+++G G +DV+SLG TI+E+ G W+ L P F
Sbjct: 225 PELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP--------PEFTA 275
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
S R L L +P R + + LL P L+
Sbjct: 276 GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 164
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 165 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 276
Query: 217 EPGERW 222
+ +R+
Sbjct: 277 DLTKRF 282
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 66 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 184
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 185 YRDLKPENLLID-QQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 296
Query: 217 EPGERW 222
+ +R+
Sbjct: 297 DLTKRF 302
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 156
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 157 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 268
Query: 217 EPGERW 222
+ +R+
Sbjct: 269 DLTKRF 274
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + ++ E R + IV +YLHS +++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 164
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 165 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 276
Query: 217 EPGERW 222
+ +R+
Sbjct: 277 DLTKRF 282
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V +++ +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+G + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 93 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELK 151
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 152 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 208 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 260
Query: 236 V 236
V
Sbjct: 261 V 261
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 44/274 (16%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAY----------------LGDDVSYEAPTTSSSCRN 50
G+ +G+G FG V +A ++ + + A L ++ +A +
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 51 LH------------LEYLPGGTVSDLATTLNAYADEITLRSHTYC--IVSALKYLHSRNI 96
L+ LEY P G +L L R+ T + AL Y H + +
Sbjct: 88 LYNYFYDRRRIYLILEYAPRG---ELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K +N+L+G +K+ADFG + A + + G+ ++ PE++ G
Sbjct: 145 IHRDIKPENLLLG-LKGELKIADFGWSVHAPSLRRKTMC----GTLDYLPPEMIEGRMHN 199
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+ D+W +G E++ G P +E N R +L +FP +D + K LR
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL-KFPASVPTGAQDLISKLLRH 258
Query: 217 EPGERWSCDQLLKHPFLQSVS-----PSDANTVA 245
P ER Q+ HP++++ S PS +VA
Sbjct: 259 NPSERLPLAQVSAHPWVRANSRRVLPPSALQSVA 292
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 64/221 (28%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS-SFVKLADFGAAGEATVSDTRGVK 135
+R + I+ L LH I+HCD+K +N+L+ S +K+ DFG++
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTX 259
Query: 136 IQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW--EDFG---ANTLSRIG 190
IQ R + APEV+ G G D+WSLGC + E++TG P ED G A + +G
Sbjct: 260 IQSR---FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 191 FSDE-----------------LPRF-------------------------PTQSSELGR- 207
+ PR+ P +S E G
Sbjct: 317 MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA 376
Query: 208 ----------DFLDKCLRREPGERWSCDQLLKHPFLQSVSP 238
DFL +CL +P R + Q L+HP+L+ P
Sbjct: 377 LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 89/222 (40%), Gaps = 64/222 (28%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS-SFVKLADFGAAGEATVSDTRGVK 135
+R + I+ L LH I+HCD+K +N+L+ S +K+ DFG++
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTX 259
Query: 136 IQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW--EDFG---ANTLSRIG 190
IQ R + APEV+ G G D+WSLGC + E++TG P ED G A + +G
Sbjct: 260 IQSR---FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 191 FSDE-----------------LPRF-------------------------PTQSSELGR- 207
+ PR+ P +S E G
Sbjct: 317 MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA 376
Query: 208 ----------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
DFL +CL +P R + Q L+HP+L+ P
Sbjct: 377 LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK 418
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++S + Y H IVH D+K +N+L+ S + +++ DFG + S KI G+
Sbjct: 135 VLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---GT 191
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGAN---TLSRI---GFSDEL 195
++APEV+ G + DVWS G + +++G P + GAN L ++ ++ EL
Sbjct: 192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFEL 248
Query: 196 PRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLD 254
P++ + SE +D + K L P R S L H ++Q+ + + S +L+
Sbjct: 249 PQWK-KVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN 306
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L+ + D + Y ++ +K+LHS I+H D+K N++V +++ +K+ DFG
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+G + EM+ G
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 163
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 275
Query: 216 REPGERW 222
+ +R+
Sbjct: 276 VDLTKRF 282
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 106 ANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-LKILDFG 164
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 165 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 279
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHS 93
+ Y A + N+ LE G +S + I R+ + + SAL+++HS
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 94 RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGE 153
R ++H D+K NV + + VKL D G + T + G+P +M+PE +
Sbjct: 155 RRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLV--GTPYYMSPERIHEN 211
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS---RIGFSDELPRFPTQSSELGRDFL 210
+SD+WSLGC + EM + + N S +I D P SE R +
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 271
Query: 211 DKCLRREPGER 221
+ C+ +P +R
Sbjct: 272 NMCINPDPEKR 282
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+PGG + + + E R + IV +YLHS +++
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 156
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 157 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 268
Query: 217 EPGERW 222
+ +R+
Sbjct: 269 DLTKRF 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + G+ +A D V
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY PGG + + ++ E R + IV +YLHS +++
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 164
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+++ ++K+ DFG A +G G+P ++APE++ +
Sbjct: 165 YRDLKPENLMID-QQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 276
Query: 217 EPGERW 222
+ +R+
Sbjct: 277 DLTKRF 282
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDT-RGVKIQPRG 140
I+ ++ Y HS IVH ++K +N+L+ + + VKLADFG A E S+ G G
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA----G 169
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI---GFSDELP 196
+P +++PEV++ + D+W+ G + ++ G P W++ ++I + P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 229
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E + +D L P +R + DQ LK P++
Sbjct: 230 EWDTVTPE-AKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCIVS-----ALKYLHSRNIVHCDVKGKNVLVG 109
Y+P G++ D + L+ L H C ++ + +LH + +H D+K N+L+
Sbjct: 105 YMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL- 160
Query: 110 PNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+ +F K++DFG A + + + G+ +MAPE +RGE P+SD++S G +
Sbjct: 161 -DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEIT-PKSDIYSFGVVL 218
Query: 169 IEMVTGKPAWED 180
+E++TG PA ++
Sbjct: 219 LEIITGLPAVDE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDT-RGVKIQPRG 140
I+ ++ Y HS IVH ++K +N+L+ + + VKLADFG A E S+ G G
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA----G 169
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI---GFSDELP 196
+P +++PEV++ + D+W+ G + ++ G P W++ ++I + P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 229
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E + +D L P +R + DQ LK P++
Sbjct: 230 EWDTVTPE-AKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 163
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWTLCGTPEYLAPEIILSKGYN 217
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 275
Query: 216 REPGERW 222
+ +R+
Sbjct: 276 VDLTKRF 282
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S C L E++ L D ++ + Y ++ + + H I+H D+K +
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDS-QIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 105 NVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEVVRGECQGPES- 159
N+L+ + + +KLADFG A G S T V LW AP+V+ G + S
Sbjct: 149 NLLINSDGA-LKLADFGLARAFGIPVRSYTHEV------VTLWYRAPDVLMGSKKYSTSV 201
Query: 160 DVWSLGCTIIEMVTGKPAW-----EDFGANTLSRIGFSD--------ELPRFPTQSSEL- 205
D+WS+GC EM+TGKP + +D S +G + ELP + ++ ++
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF 261
Query: 206 ---------------GRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
G D L L +P +R S + HP+ + + P
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ 310
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 115 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 173
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG------- 174
A A S + R + APEV+ G D+WS+GC + EM+ G
Sbjct: 174 LARTAGTSFMMVPFVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 175 ------------------------KPAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
+P + N G+S E P FP S
Sbjct: 231 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 290
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 291 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 350
Query: 260 FEE 262
EE
Sbjct: 351 IEE 353
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDT-RGVKIQPRG 140
I+ ++ Y HS IVH ++K +N+L+ + + VKLADFG A E S+ G G
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA----G 168
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI---GFSDELP 196
+P +++PEV++ + D+W+ G + ++ G P W++ ++I + P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 228
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E + +D L P +R + DQ LK P++
Sbjct: 229 EWDTVTPE-AKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S C L E++ L D ++ + Y ++ + + H I+H D+K +
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDS-QIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 105 NVLVGPNSSFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWM-APEVVRGECQGPES- 159
N+L+ + + +KLADFG A G S T V LW AP+V+ G + S
Sbjct: 149 NLLINSDGA-LKLADFGLARAFGIPVRSYTHEV------VTLWYRAPDVLMGSKKYSTSV 201
Query: 160 DVWSLGCTIIEMVTGKPAW-----EDFGANTLSRIGFSD--------ELPRFPTQSSEL- 205
D+WS+GC EM+TGKP + +D S +G + ELP + ++ ++
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF 261
Query: 206 ---------------GRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
G D L L +P +R S + HP+ + + P
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ 310
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCIVS-----ALKYLHSRNIVHCDVKGKNVLVG 109
Y+P G++ D + L+ L H C ++ + +LH + +H D+K N+L+
Sbjct: 111 YMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL- 166
Query: 110 PNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+ +F K++DFG A + + + G+ +MAPE +RGE P+SD++S G +
Sbjct: 167 -DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEIT-PKSDIYSFGVVL 224
Query: 169 IEMVTGKPAWED 180
+E++TG PA ++
Sbjct: 225 LEIITGLPAVDE 236
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + ++ E R + IV +YLHS ++
Sbjct: 90 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 148
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 149 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWTLCGTPEYLAPEIILSKGYN 202
Query: 157 PESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCL 214
D W+LG I EM G P F A+ +I RFP+ S +D L L
Sbjct: 203 KAVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 259
Query: 215 RREPGERW 222
+ + +R+
Sbjct: 260 QVDLTKRF 267
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 22/137 (16%)
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCIVS-----ALKYLHSRNIVHCDVKGKNVLVG 109
Y+P G++ D + L+ L H C ++ + +LH + +H D+K N+L+
Sbjct: 111 YMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL- 166
Query: 110 PNSSFV-KLADFGAAGEA-----TVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
+ +F K++DFG A + TV +R V G+ +MAPE +RGE P+SD++S
Sbjct: 167 -DEAFTAKISDFGLARASEKFAQTVMXSRIV-----GTTAYMAPEALRGEIT-PKSDIYS 219
Query: 164 LGCTIIEMVTGKPAWED 180
G ++E++TG PA ++
Sbjct: 220 FGVVLLEIITGLPAVDE 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDT-RGVKIQPRG 140
I+ ++ Y HS IVH ++K +N+L+ + + VKLADFG A E S+ G G
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA----G 192
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRI---GFSDELP 196
+P +++PEV++ + D+W+ G + ++ G P W++ ++I + P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 252
Query: 197 RFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ T + E + +D L P +R + DQ LK P++
Sbjct: 253 EWDTVTPE-AKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYC-----IVSALKYLHSRNIVHCDVKGKN 105
L LEYL GG + E T C I AL +LH + I++ D+K +N
Sbjct: 98 LILEYLSGGEL------FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN 151
Query: 106 VLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
+++ + VKL DFG E+ T V G+ +MAPE++ D WSLG
Sbjct: 152 IMLN-HQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 166 CTIIEMVTGKPAWEDFGAN---TLSRI-GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +M+TG P + G N T+ +I LP + TQ + RD L K L+R R
Sbjct: 209 ALMYDMLTGAPPFT--GENRKKTIDKILKCKLNLPPYLTQEA---RDLLKKLLKRNAASR 263
Query: 222 W-----SCDQLLKHPFLQSVS 237
++ HPF + ++
Sbjct: 264 LGAGPGDAGEVQAHPFFRHIN 284
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 96 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 154
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 155 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 210
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 211 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 263
Query: 236 V 236
V
Sbjct: 264 V 264
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYC-----IVSALKYLHSRNIVHCDVKGKN 105
L LEYL GG + E T C I AL +LH + I++ D+K +N
Sbjct: 98 LILEYLSGGEL------FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN 151
Query: 106 VLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
+++ + VKL DFG E+ T V G+ +MAPE++ D WSLG
Sbjct: 152 IMLN-HQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 166 CTIIEMVTGKPAWEDFGAN---TLSRI-GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +M+TG P + G N T+ +I LP + TQ + RD L K L+R R
Sbjct: 209 ALMYDMLTGAPPFT--GENRKKTIDKILKCKLNLPPYLTQEA---RDLLKKLLKRNAASR 263
Query: 222 W-----SCDQLLKHPFLQSVS 237
++ HPF + ++
Sbjct: 264 LGAGPGDAGEVQAHPFFRHIN 284
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 93 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 151
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 152 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 208 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 260
Query: 236 V 236
V
Sbjct: 261 V 261
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 89/222 (40%), Gaps = 64/222 (28%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS-SFVKLADFGAAGEATVSDTRGVK 135
+R + I+ L LH I+HCD+K +N+L+ S +K+ DFG++
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXX 259
Query: 136 IQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW--EDFG---ANTLSRIG 190
IQ R + APEV+ G G D+WSLGC + E++TG P ED G A + +G
Sbjct: 260 IQSR---FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 191 FSDE-----------------LPRF-------------------------PTQSSELGR- 207
+ PR+ P +S E G
Sbjct: 317 MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA 376
Query: 208 ----------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
DFL +CL +P R + Q L+HP+L+ P
Sbjct: 377 LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK 418
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+++ ++K+ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLMID-QQGYIKVTDFGLAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 97 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 155
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 156 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 211
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 212 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 264
Query: 236 V 236
V
Sbjct: 265 V 265
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPN--SSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
I+ A+ + H +VH ++K +N+L+ + VKLADFG A E V + G+
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGT 176
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI----GFSDELPR 197
P +++PEV+R + G D+W+ G + ++ G P + D + L + + P
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 236
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ T + E +D ++K L P +R + + LKHP++ S
Sbjct: 237 WDTVTPE-AKDLINKMLTINPSKRITAAEALKHPWISHRS 275
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+++ ++K+ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLMID-QQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 98 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 156
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 157 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 212
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 213 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 265
Query: 236 V 236
V
Sbjct: 266 V 266
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + + E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 98 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 156
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 157 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 212
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 213 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 265
Query: 236 V 236
V
Sbjct: 266 V 266
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + + E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 97 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 155
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 156 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 211
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 212 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 264
Query: 236 V 236
V
Sbjct: 265 V 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+PGG + + + E R + IV +YLHS ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDL 163
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 275
Query: 216 REPGERW 222
+ +R+
Sbjct: 276 VDLTKRF 282
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 98 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 156
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 157 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 212
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 213 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 265
Query: 236 V 236
V
Sbjct: 266 V 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+PGG + +L + N E R +T +V AL +HS +H DVK N+L+ S
Sbjct: 148 MEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KS 204
Query: 113 SFVKLADFGA----AGEATVSDTRGVKIQPRGSPLWMAPEVVRGE----CQGPESDVWSL 164
+KLADFG E V V G+P +++PEV++ + G E D WS+
Sbjct: 205 GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSV 259
Query: 165 GCTIIEMVTGK-PAWEDFGANTLSRI 189
G + EM+ G P + D T S+I
Sbjct: 260 GVFLYEMLVGDTPFYADSLVGTYSKI 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 85 VSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLW 144
+ ++YLH+ ++H D+K N+ + + VK+ DFG A + R + G+P +
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLC--GTPNY 192
Query: 145 MAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELPRFPTQSS 203
+APEV+ + E D+WSLGC + ++ GKP +E T RI ++ P +
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHIN 250
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ + + L +P R S +LL F S
Sbjct: 251 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 282
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 140 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 198
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 199 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 255 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 307
Query: 236 V 236
V
Sbjct: 308 V 308
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+PGG + +L + N E R +T +V AL +HS +H DVK N+L+ S
Sbjct: 153 MEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KS 209
Query: 113 SFVKLADFGA----AGEATVSDTRGVKIQPRGSPLWMAPEVVRGE----CQGPESDVWSL 164
+KLADFG E V V G+P +++PEV++ + G E D WS+
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 165 GCTIIEMVTGK-PAWEDFGANTLSRI 189
G + EM+ G P + D T S+I
Sbjct: 265 GVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+PGG + +L + N E R +T +V AL +HS +H DVK N+L+ S
Sbjct: 153 MEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KS 209
Query: 113 SFVKLADFGA----AGEATVSDTRGVKIQPRGSPLWMAPEVVRGE----CQGPESDVWSL 164
+KLADFG E V V G+P +++PEV++ + G E D WS+
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 165 GCTIIEMVTGK-PAWEDFGANTLSRI 189
G + EM+ G P + D T S+I
Sbjct: 265 GVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 96/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S ++ R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMEPEVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
P + N G+S E P FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 348
Query: 260 FEE 262
EE
Sbjct: 349 IEE 351
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 140 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 198
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 199 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 255 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 307
Query: 236 V 236
V
Sbjct: 308 V 308
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 85 VSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLW 144
+ ++YLH+ ++H D+K N+ + + VK+ DFG A + R + G+P +
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKXLC--GTPNY 208
Query: 145 MAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELPRFPTQSS 203
+APEV+ + E D+WSLGC + ++ GKP +E T RI ++ P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ + + L +P R S +LL F S
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 34/192 (17%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
+ +T +S +++ + Y H R ++H D+K +N+L+ +K+ADFG A +
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFGLARAFGIPVR- 155
Query: 133 GVKIQPRGSPLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFG-ANTLSRI 189
K LW AP+V+ G + + D+WS+GC EMV G P + A+ L RI
Sbjct: 156 --KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213
Query: 190 ----GFSD--------ELPRF----------PTQS-----SELGRDFLDKCLRREPGERW 222
G + ELP++ P +S E G D L K L+ +P +R
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 223 SCDQLLKHPFLQ 234
+ Q L+H + +
Sbjct: 274 TAKQALEHAYFK 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+L+ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 138 IHRDVKPANILISATNA-VKVVDFGIA--RAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAW 178
SDV+SLGC + E++TG+P +
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 125 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 183
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 184 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 240 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 292
Query: 236 V 236
V
Sbjct: 293 V 293
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY PGG + + + E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+++ ++K+ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLMID-QQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 113 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 172 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F + SSE + + CL P +R + +++ HP++Q
Sbjct: 228 IPFEHDEEIIRGQVFFRQRV------SSEC-QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
Query: 236 V 236
V
Sbjct: 281 V 281
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 85 VSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLW 144
+ ++YLH+ ++H D+K N+ + + VK+ DFG A + R + G+P +
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLC--GTPNY 208
Query: 145 MAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELPRFPTQSS 203
+APEV+ + E D+WSLGC + ++ GKP +E T RI ++ P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ + + L +P R S +LL F S
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 93 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 151
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 152 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 208 IPFEHDEEIIGGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 260
Query: 236 V 236
V
Sbjct: 261 V 261
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 5 VRGKCIGRGSFGTVNVAVDRFNGDVFA----------------YLGDDVSYEAPTTSSSC 48
+ K +GRG F V + + G +A L + E +
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 49 RNLH------------LEYLPGGTVSDLAT-TLNAYADEITLRSHTYCIVSALKYLHSRN 95
NLH LEY GG + L L E + I+ + YLH N
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 96 IVHCDVKGKNVLVGPNSSF--VKLADFGAAGE-ATVSDTRGVKIQPRGSPLWMAPEVVRG 152
IVH D+K +N+L+ +K+ DFG + + + R + G+P ++APE++
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI----MGTPEYLAPEILNY 207
Query: 153 ECQGPESDVWSLGCTIIEMVT------GKPAWEDFGANTLSRIGFSDELPRFPTQSSELG 206
+ +D+W++G ++T G+ E + + + +S+E + S+L
Sbjct: 208 DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET---FSSVSQLA 264
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQ 234
DF+ L + P +R + + L H +LQ
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 112 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 170
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 171 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 227 IPFEHDEEIIRGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 279
Query: 236 V 236
V
Sbjct: 280 V 280
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 34/192 (17%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
+ +T +S +++ + Y H R ++H D+K +N+L+ +K+ADFG A +
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFGLARAFGIPVR- 155
Query: 133 GVKIQPRGSPLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFG-ANTLSRI 189
K LW AP+V+ G + + D+WS+GC EMV G P + A+ L RI
Sbjct: 156 --KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRI 213
Query: 190 ----GFSD--------ELPRF----------PTQS-----SELGRDFLDKCLRREPGERW 222
G + ELP++ P +S E G D L K L+ +P +R
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 223 SCDQLLKHPFLQ 234
+ Q L+H + +
Sbjct: 274 TAKQALEHAYFK 285
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 85 VSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLW 144
+ ++YLH+ ++H D+K N+ + + VK+ DFG A + R + G+P +
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKTLC--GTPNY 208
Query: 145 MAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFSDELPRFPTQSS 203
+APEV+ + E D+WSLGC + ++ GKP +E T RI ++ P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ + + L +P R S +LL F S
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 132 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 190
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 191 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F + SSE + + CL P +R + +++ HP++Q
Sbjct: 247 IPFEHDEEIIRGQVFFRQRV------SSEC-QHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
Query: 236 V 236
V
Sbjct: 300 V 300
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 34/192 (17%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
+ +T +S +++ + Y H R ++H D+K +N+L+ +K+ADFG A +
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFGLARAFGIPVR- 155
Query: 133 GVKIQPRGSPLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFG-ANTLSRI 189
K LW AP+V+ G + + D+WS+GC EMV G P + A+ L RI
Sbjct: 156 --KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213
Query: 190 ----GFSD--------ELPRF----------PTQS-----SELGRDFLDKCLRREPGERW 222
G + ELP++ P +S E G D L K L+ +P +R
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 223 SCDQLLKHPFLQ 234
+ Q L+H + +
Sbjct: 274 TAKQALEHAYFK 285
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY PGG + + ++ E R + IV +YLHS ++++ D+K +N+++
Sbjct: 121 MEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQ 178
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
++K+ DFG A +G G+P ++APE++ + D W+LG I EM
Sbjct: 179 GYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 173 TGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
G P + D +I S ++ RFP+ S +D L L+ + +R+
Sbjct: 234 AGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 151 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 209
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 210 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 324
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 118 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 176
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 177 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 176 -------------------------PAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
P + N G+S E P FP S
Sbjct: 234 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 293
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 294 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 353
Query: 260 FEE 262
EE
Sbjct: 354 IEE 356
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 45/253 (17%)
Query: 10 IGRGSFGTV--------NVAVDRFNGD-----VFAYLGDDVSYEAPTTSS---SCRN--- 50
+GRG+FG V +VA+ + + L P +C N
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC 75
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV--SALKYLHS---RNIVHCDVKGKN 105
L +EY GG++ ++ + ++C+ + YLHS + ++H D+K N
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 106 VLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
+L+ + +K+ DFG A + T +GS WMAPEV G + DV+S G
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 166 CTIIEMVTGKPAWEDFGANTL---------SRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+ E++T + +++ G +R LP+ P +S + +C +
Sbjct: 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK-PIES------LMTRCWSK 243
Query: 217 EPGERWSCDQLLK 229
+P +R S ++++K
Sbjct: 244 DPSQRPSMEEIVK 256
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NVL+
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
++ A+ YLH IVH D+K +N+L S + ++DFG + D G+
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC---GT 185
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPR---F 198
P ++APEV+ + D WS+G ++ G P + D + L E +
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPY 245
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
S+ +DF+ + ++P +R++C+Q +HP++
Sbjct: 246 WDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY PGG + + ++ E R + IV +YLHS ++++ D+K +N+++
Sbjct: 121 MEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQ 178
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
++K+ DFG A +G G+P ++APE++ + D W+LG I EM
Sbjct: 179 GYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 173 TGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
G P + D +I S ++ RFP+ S +D L L+ + +R+
Sbjct: 234 AGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 45/253 (17%)
Query: 10 IGRGSFGTV--------NVAVDRFNGD-----VFAYLGDDVSYEAPTTSS---SCRN--- 50
+GRG+FG V +VA+ + + L P +C N
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC 76
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV--SALKYLHS---RNIVHCDVKGKN 105
L +EY GG++ ++ + ++C+ + YLHS + ++H D+K N
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 106 VLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLG 165
+L+ + +K+ DFG A + T +GS WMAPEV G + DV+S G
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 166 CTIIEMVTGKPAWEDFGANTL---------SRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
+ E++T + +++ G +R LP+ P +S + +C +
Sbjct: 192 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK-PIES------LMTRCWSK 244
Query: 217 EPGERWSCDQLLK 229
+P +R S ++++K
Sbjct: 245 DPSQRPSMEEIVK 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 151 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 209
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 210 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 324
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+PGG + +L + N E + +T +V AL +HS ++H DVK N+L+ +
Sbjct: 154 MEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG 211
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGE----CQGPESDVWSLGCT 167
+KLADFG + +T V G+P +++PEV++ + G E D WS+G
Sbjct: 212 H-LKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 168 IIEMVTGK-PAWEDFGANTLSRIGFSDELPRFPTQS--SELGRDFLDKCL--RREPGERW 222
+ EM+ G P + D T S+I FP + S+ ++ + L R R
Sbjct: 269 LFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRN 328
Query: 223 SCDQLLKHPFLQS 235
+++ +HPF ++
Sbjct: 329 GVEEIKQHPFFKN 341
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 120 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 178
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 179 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 234
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 235 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 287
Query: 236 V 236
V
Sbjct: 288 V 288
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 114 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 172
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 173 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 287
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNGI 137
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+++ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIA--RAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFS----DELP---RFPTQSSELG 206
SDV+SLGC + E++TG+P F ++ + + D +P R S++L
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP---FTGDSPDSVAYQHVREDPIPPSARHEGLSADLD 251
Query: 207 RDFLDKCLRREPGERWSC 224
L K L + P R+
Sbjct: 252 AVVL-KALAKNPENRYQT 268
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 114 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 172
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 173 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 287
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + +A E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 107 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 165
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 166 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 176 -------------------------PAWEDFGANTLSRIGFSDE--LPR--FPTQS---- 202
P + N G+S E P FP S
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 282
Query: 203 --SELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWVNSE 259
+ RD L K L + +R S D+ L+HP++ PS+A P LD
Sbjct: 283 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHT 342
Query: 260 FEE 262
EE
Sbjct: 343 IEE 345
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 112 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 170
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 171 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 285
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 286 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 106 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 164
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 165 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 279
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 171
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 172 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 286
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 107 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 165
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 166 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 280
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 112 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 170
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 171 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 227 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 279
Query: 236 V 236
V
Sbjct: 280 V 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 125 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 183
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 184 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 240 IPFEHDEEIIGGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 292
Query: 236 V 236
V
Sbjct: 293 V 293
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 62 SDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFG 121
++L + D + Y ++ +K+LHS I+H D+K N++V + + +K+ DFG
Sbjct: 107 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 165
Query: 122 AAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGK------ 175
A A S + R + APEV+ G D+WS+GC + EMV K
Sbjct: 166 LARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 176 -------------------------PAWEDFGANTLSRIG------FSDELPRFPTQS-- 202
P ++ N G F D L FP S
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL--FPADSEH 280
Query: 203 ----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ RD L K L +P +R S D L+HP++
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+++ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLMID-QQGYIQVTDFGLAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I + + YL S++ VH D+ +N LVG N VK+ DFG + + +D V
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDELPRFPTQS 202
WM PE + ESDVWSLG + E+ T GK W N + + + P
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
+ + + C +REP R + + H LQ+++ +
Sbjct: 256 PQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAKA 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 113 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 172 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 228 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 280
Query: 236 V 236
V
Sbjct: 281 V 281
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 126 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 184
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 185 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 241 IPFEHDEEIIGGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 293
Query: 236 V 236
V
Sbjct: 294 V 294
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY PGG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+++ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLMID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 125 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 183
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 184 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 240 IPFEHDEEIIGGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 292
Query: 236 V 236
V
Sbjct: 293 V 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 140 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 198
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 199 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 255 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 307
Query: 236 V 236
V
Sbjct: 308 V 308
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 145 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 203
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 204 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 259
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 260 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 312
Query: 236 V 236
V
Sbjct: 313 V 313
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 184
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 185 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 296
Query: 217 EPGERW 222
+ +R+
Sbjct: 297 DLTKRF 302
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY PGG + + + E R + IV +YLHS ++++ D+K +N+++
Sbjct: 121 MEYAPGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQ 178
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
++K+ DFG A +G G+P ++APE++ + D W+LG I EM
Sbjct: 179 GYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 173 TGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
G P + D +I S ++ RFP+ S +D L L+ + +R+
Sbjct: 234 AGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 126 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 184
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 185 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R ++ L R CL P +R + +++ HP++Q
Sbjct: 241 IPFEHDEEIIGGQVFFRQ---RVSSECQHLIR----WCLALRPSDRPTFEEIQNHPWMQD 293
Query: 236 V 236
V
Sbjct: 294 V 294
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 99 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGI 154
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+++ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 155 IHRDVKPANIMISATNA-VKVMDFGIA--RAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAW 178
SDV+SLGC + E++TG+P +
Sbjct: 212 SVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+++ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIA--RAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAW 178
SDV+SLGC + E++TG+P +
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 113 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 172 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 176 PAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+E ++ F R + L R CL P +R + +++ HP++Q
Sbjct: 228 IPFEHDEEIIRGQVFFRQ---RVSXECQHLIR----WCLALRPXDRPTFEEIQNHPWMQD 280
Query: 236 V 236
V
Sbjct: 281 V 281
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+++ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIA--RAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAW 178
SDV+SLGC + E++TG+P +
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 40 EAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIV---SALKYLHSRNI 96
EA T + + +EY+ G T+ D+ T +T + I AL + H I
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVVRGE 153
+H DVK N+++ ++ VK+ DFG A ++D+ Q G+ +++PE RG+
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIA--RAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 154 CQGPESDVWSLGCTIIEMVTGKPAW 178
SDV+SLGC + E++TG+P +
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLV---GPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
+ I ++YLH++ +VH D+K N+L N +++ DFG A + + G+ P
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTP 180
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAW----EDFGANTLSRIG---F 191
+ ++APEV+ + D+WSLG + +TG + +D L+RIG F
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF 240
Query: 192 SDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
S + S+ +D + K L +P +R + +L+HP++
Sbjct: 241 SLS-GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 112 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 168 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 284
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 285 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 331
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 126 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 184
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 185 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 176 PAWED----FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHP 231
+E G R S E + + CL P +R + +++ HP
Sbjct: 241 IPFEHDEEIIGGQVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 232 FLQSV 236
++Q V
Sbjct: 290 WMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 125 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 183
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 184 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 176 PAWED----FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHP 231
+E G R S E + + CL P +R + +++ HP
Sbjct: 240 IPFEHDEEIIGGQVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 232 FLQSV 236
++Q V
Sbjct: 289 WMQDV 293
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 57 PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVK 116
P + D T A +E+ RS + ++ A+++ H+ ++H D+K +N+L+ N +K
Sbjct: 126 PVQDLFDFITERGALQEELA-RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 184
Query: 117 LADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGK 175
L DFG+ A + DT V G+ ++ PE +R G + VWSLG + +MV G
Sbjct: 185 LIDFGSG--ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 176 PAWED----FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHP 231
+E G R S E + + CL P +R + +++ HP
Sbjct: 241 IPFEHDEEIIGGQVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 232 FLQSV 236
++Q V
Sbjct: 290 WMQDV 294
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPN 111
+EY GG + + ++++ R ++S + Y H+ + H D+K +N L+ G
Sbjct: 94 MEYASGGELFERICNAGRFSED-EARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSP 152
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCT 167
+ +K+ADFG + + + QP+ G+P ++APEV+ + E G +DVWS G T
Sbjct: 153 APRLKIADFGYSKASVLHS------QPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 168 IIEMVTGKPAWED------FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ M+ G +ED F + +P + S E R + + +P +R
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKR 265
Query: 222 WSCDQLLKHPFLQSVSPSD 240
S ++ H + P+D
Sbjct: 266 ISIPEIRNHEWFLKNLPAD 284
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I+SA++Y H IVH D+K +N+L+ + + VK+ADFG + ++D +K GSP
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSN--IMTDGNFLKTSC-GSPN 177
Query: 144 WMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+ APEV+ G+ GPE DVWS G + M+ + ++D L + S+ + P
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-NISNGVYTLPKFL 236
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLK 229
S + + L P R S ++++
Sbjct: 237 SPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 118 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 173
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 174 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 230
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 231 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 290
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 291 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 337
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLRQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDA 241
DFLDK LR + R + + ++HP+ +V A
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQA 332
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I+SA++Y H IVH D+K +N+L+ + + VK+ADFG + ++D +K GSP
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSN--IMTDGNFLKTSC-GSPN 176
Query: 144 WMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+ APEV+ G+ GPE DVWS G + M+ + ++D L + S+ + P
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-NISNGVYTLPKFL 235
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLK 229
S + + L P R S ++++
Sbjct: 236 SPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I+SA++Y H IVH D+K +N+L+ + + VK+ADFG + ++D +K GSP
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSN--IMTDGNFLKTSC-GSPN 167
Query: 144 WMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+ APEV+ G+ GPE DVWS G + M+ + ++D L + S+ + P
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-NISNGVYTLPKFL 226
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLK 229
S + + L P R S ++++
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I+SA++Y H IVH D+K +N+L+ + + VK+ADFG + ++D +K GSP
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSN--IMTDGNFLKTSC-GSPN 171
Query: 144 WMAPEVVRGECQ-GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+ APEV+ G+ GPE DVWS G + M+ + ++D L + S+ + P
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-NISNGVYTLPKFL 230
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLK 229
S + + L P R S ++++
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 46 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 164
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 165 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 276
Query: 217 EPGERW 222
+ +R+
Sbjct: 277 DLTKRF 282
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 45/222 (20%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV 236
DFLDK LR + R + + ++HP+ +V
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 45/222 (20%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 112 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 167
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 168 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 284
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV 236
DFLDK LR + R + + ++HP+ +V
Sbjct: 285 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 91 LHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEV 149
LH NIVH D+K +N+L+ + + +KL DFG + + G K++ G+P ++APE+
Sbjct: 127 LHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD----PGEKLREVCGTPSYLAPEI 181
Query: 150 VRGECQ--------GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL----PR 197
+ EC G E D+WS G + ++ G P + + R+ S P
Sbjct: 182 I--ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ S + +D + + L +P +R++ ++ L HPF Q
Sbjct: 240 WDDYSDTV-KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 91 LHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEV 149
LH NIVH D+K +N+L+ + + +KL DFG + + G K++ G+P ++APE+
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD----PGEKLRSVCGTPSYLAPEI 194
Query: 150 VRGECQ--------GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL----PR 197
+ EC G E D+WS G + ++ G P + + R+ S P
Sbjct: 195 I--ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ S + +D + + L +P +R++ ++ L HPF Q
Sbjct: 253 WDDYSDTV-KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 45/222 (20%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV 236
DFLDK LR + R + + ++HP+ +V
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 40/247 (16%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P F A+ +I RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 91 LHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEV 149
LH NIVH D+K +N+L+ + + +KL DFG + + G K++ G+P ++APE+
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD----PGEKLREVCGTPSYLAPEI 194
Query: 150 VRGECQ--------GPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL----PR 197
+ EC G E D+WS G + ++ G P + + R+ S P
Sbjct: 195 I--ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 198 FPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+ S + +D + + L +P +R++ ++ L HPF Q
Sbjct: 253 WDDYSDTV-KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 40/247 (16%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 32 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 92 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 150
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 151 YRDLKPENLLID-EQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P F A+ +I RFP+ S +D L L+
Sbjct: 205 AVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
Query: 216 REPGERW 222
+ +R+
Sbjct: 262 VDLTKRF 268
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 45/222 (20%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 111 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 166
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 167 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 223
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 224 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 283
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV 236
DFLDK LR + R + + ++HP+ +V
Sbjct: 284 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 92/234 (39%), Gaps = 45/234 (19%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ L TL Y +R + Y I+ AL Y HS I+H DVK NV++
Sbjct: 113 FEHVNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A V++ R + PE +V + D+WSLGC + M
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 172 VTGKPAWEDFGAN--TLSRIG-------FSDELPRF-----PTQSSELGR---------- 207
+ K + N L RI D + ++ P + LGR
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
DFLDK LR + R + + ++HP+ V + A+++
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQPCADNA 339
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV-GPNS-SFVKLADFG-AAGEATVSDTRGVK----I 136
+ SAL +LH++ I H D+K +N+L PN S VK+ DFG +G D + +
Sbjct: 120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 137 QPRGSPLWMAPEVV-----RGECQGPESDVWSLGCTIIEMVTGKP----------AWEDF 181
P GS +MAPEVV D+WSLG + +++G P W+
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239
Query: 182 GANTLSRIGFSDELP----RFPTQS----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
A + + + FP + S +D + K L R+ +R S Q+L+HP++
Sbjct: 240 EACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 234 QSVSPSD 240
Q +P +
Sbjct: 300 QGCAPEN 306
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 120 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 175
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 176 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 232
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 233 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRH 291
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 292 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 346
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADEPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E +S + +EY+ GG + + ++ E R + IV +YLHS ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDL 162
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
++ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 163 IYRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 157 PESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 47/236 (19%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
++ Y + A+K LH N++H D+K N+L+ N +K+ DFG A + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA--RIIDESAADNS 170
Query: 137 QPRGSPLWM----------APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGA 183
+P G M APEV+ + + DVWS GC + E+ +P + D+
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 184 NTLSRIG---------------------FSDELPRFPTQSSE--------LGRDFLDKCL 214
L G + LP +P E G D L + L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEK 270
+P +R + + L+HP+LQ+ + E P ++ ++E T+ D K
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF--DHYKEALTTKDLK 344
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + + E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + + E R + IV +YLHS +++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 184
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 185 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 296
Query: 217 EPGERW 222
+ +R+
Sbjct: 297 DLTKRF 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + + E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P F A+ +I RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 40 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + + E R + IV +YLHS +++
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 158
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 159 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P F A+ +I RFP+ S +D L L+
Sbjct: 213 AVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 269
Query: 216 REPGERW 222
+ +R+
Sbjct: 270 VDLTKRF 276
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 47/236 (19%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
++ Y + A+K LH N++H D+K N+L+ N +K+ DFG A + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA--RIIDESAADNS 170
Query: 137 QPRGSPLWM----------APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGA 183
+P G M APEV+ + + DVWS GC + E+ +P + D+
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 184 NTLSRIG---------------------FSDELPRFPTQSSE--------LGRDFLDKCL 214
L G + LP +P E G D L + L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEK 270
+P +R + + L+HP+LQ+ + E P ++ ++E T+ D K
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF--DHYKEALTTKDLK 344
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 47/236 (19%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
++ Y + A+K LH N++H D+K N+L+ N +K+ DFG A + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA--RIIDESAADNS 170
Query: 137 QPRGSPLWM----------APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGA 183
+P G M APEV+ + + DVWS GC + E+ +P + D+
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 184 NTLSRIG---------------------FSDELPRFPTQSSE--------LGRDFLDKCL 214
L G + LP +P E G D L + L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSDANTVAESSPRCVLDWVNSEFEEEGTSDDEK 270
+P +R + + L+HP+LQ+ + E P ++ ++E T+ D K
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF--DHYKEALTTKDLK 344
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 48/242 (19%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 101 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 156
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 157 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 213
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 214 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 272
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSV-SPSDANTV 244
DFLDK LR + ER + + + HP+ Q V + ++ T
Sbjct: 273 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAENSRTR 332
Query: 245 AE 246
AE
Sbjct: 333 AE 334
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 100 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 155
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 212
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 213 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 271
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 272 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + + E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPAWEDFGANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P F A+ +I RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPP---FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 216 REPGERW 222
+ +R+
Sbjct: 275 VDLTKRF 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGS 141
+++AL Y HS+++VH D+K +N+L S S +K+ DFG A E SD G+
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHSTN--AAGT 189
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQ 201
L+MAPEV + + + D+WS G + ++TG + + + E P + +
Sbjct: 190 ALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-PNYAVE 247
Query: 202 SSEL---GRDFLDKCLRREPGERWSCDQLLKH 230
L D L + L ++P R S Q+L H
Sbjct: 248 CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 100 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 155
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 212
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 213 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 271
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 272 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
S +L EY+ L TL Y +R + Y ++ AL Y HS+ I+H DVK
Sbjct: 99 HSKTPSLIFEYVNNTDFKVLYPTLTDY----DIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 105 NVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWS 163
NV++ ++L D+G A V++ R + PE +V + D+WS
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWS 211
Query: 164 LGCTIIEMVTGKPAWEDFG----------ANTLSRIGFSDELPRF-----PTQSSELGR- 207
LGC M+ K + +G A L G + L ++ P + +GR
Sbjct: 212 LGCMFAGMIFRKEPFF-YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRH 270
Query: 208 ----------------------DFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
DFLDK LR + ER + + + HP+ Q V ++
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 80 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 139 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 197
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 198 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 256
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSDANTVAE 246
+P +R + L FL P+D + +
Sbjct: 257 AHKPEDRPTFVAL--RDFLLEAQPTDMRALQD 286
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I S + YL S++ VH D+ +N LVG N VK+ DFG + + +D V
Sbjct: 142 IASGMVYLASQHFVHRDLATRNCLVGAN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDELPRFPTQS 202
WM PE + ESDVWS G + E+ T GK W + + P
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC 260
Query: 203 SELGRDFLDKCLRREPGERWSCDQLLK 229
+ D + C +REP +R + ++ K
Sbjct: 261 PKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EY+P G++ D + ++ L + C + YLH+++ +H D+ +NVL+
Sbjct: 111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--EGMAYLHAQHYIHRDLAARNVLLD 168
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRG-SP-LWMAPEVVRGECQGPESDVWSLGCT 167
N VK+ DFG A +A +++ G SP W APE ++ SDVWS G T
Sbjct: 169 -NDRLVKIGDFGLA-KAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 168 IIEMVT 173
+ E++T
Sbjct: 227 LYELLT 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQ 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I +M G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYQMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 107/266 (40%), Gaps = 40/266 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 86 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 145 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSH 203
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 204 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 262
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSD 240
+P +R + L FL P+D
Sbjct: 263 AHKPEDRPTFVAL--RDFLLEAQPTD 286
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-- 95
S+E+ C L E GT+ ++ LRS I+ L++LH+R
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV-LRSWCRQILKGLQFLHTRTPP 151
Query: 96 IVHCDVKGKNVLV-GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGEC 154
I+H D+K N+ + GP S VK+ D G A S + V G+P + APE E
Sbjct: 152 IIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVI----GTPEFXAPEXYE-EK 205
Query: 155 QGPESDVWSLGCTIIEMVTGKPAWED--FGANTLSRIGFSDELPRFPTQSSELGRDFLDK 212
DV++ G +E T + + + A R+ + F + ++ ++
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
Query: 213 CLRREPGERWSCDQLLKHPFLQ 234
C+R+ ER+S LL H F Q
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+++ ++++ DFG A +G G+P ++APE++ +
Sbjct: 164 YRDLKPENLIID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I + Y+ +N +H D++ NVLV S K+ADFG A + D + P+
Sbjct: 119 IAEGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLA--RVIEDNEYTAREGAKFPI 175
Query: 144 -WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GK-PAWEDFGANTLSRIGFSDELPRFPT 200
W APE + C +SDVWS G + E+VT GK P A+ ++ + +PR
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVEN 235
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
EL D + C + + ER + D +LQSV
Sbjct: 236 CPDEL-YDIMKMCWKEKAEERPTFD------YLQSV 264
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEI---TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL 107
L +EY GG DL T L+ + + I R + IV A+ +H VH D+K N+L
Sbjct: 138 LVMEYYVGG---DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNIL 194
Query: 108 VGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRG-------ECQG 156
+ ++LADFG+ + TV V G+P +++PE+++ G
Sbjct: 195 LD-RCGHIRLADFGSCLKLRADGTVRSLVAV-----GTPDYLSPEILQAVGGGPGTGSYG 248
Query: 157 PESDVWSLGCTIIEMVTGK-PAWEDFGANTLSRIGFSDE---LPRFPTQSSELGRDFLDK 212
PE D W+LG EM G+ P + D A T +I E LP E RDF+ +
Sbjct: 249 PECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQR 308
Query: 213 CL 214
L
Sbjct: 309 LL 310
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 107/266 (40%), Gaps = 40/266 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 76 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 135 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 252
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSD 240
+P +R + L FL P+D
Sbjct: 253 AHKPEDRPTFVAL--RDFLLEAQPTD 276
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P T DL Y D +TL +++ + +++L SR +H D+
Sbjct: 121 STYLRSKRNEFVPYKTPEDL------YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 175 AARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 287 -CWHGEPSQRPTFSELVEH 304
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I + Y+ +N +H D++ NVLV S K+ADFG A + D + P+
Sbjct: 118 IAEGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLA--RVIEDNEYTAREGAKFPI 174
Query: 144 -WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GK-PAWEDFGANTLSRIGFSDELPRFPT 200
W APE + C +S+VWS G + E+VT GK P A+ +S + +PR
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMEN 234
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
EL D + C + + ER + D +LQSV
Sbjct: 235 CPDEL-YDIMKMCWKEKAEERPTFD------YLQSV 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 95 NIVHCDVKGKNVLV-GPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPLWMAPEVVRG 152
+I+HCD+K +N+L+ P S +K+ DFG++ + G +I Q S + +PEV+ G
Sbjct: 179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------GQRIYQXIQSRFYRSPEVLLG 232
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIG 190
D+WSLGC ++EM TG+P + GAN + ++
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFS--GANEVDQMN 268
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 107/266 (40%), Gaps = 40/266 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 86 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 145 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 203
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 204 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 262
Query: 215 RREPGERWSCDQLLKHPFLQSVSPSD 240
+P +R + L FL P+D
Sbjct: 263 AHKPEDRPTFVAL--RDFLLEAQPTD 286
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 71 YADEITLR---SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEAT 127
Y + IT+ S+++ + +++L SR +H D+ +N+L+ N+ VK+ DFG A +
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENN-VVKICDFGLARDIY 250
Query: 128 VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-------GKPAWED 180
+ K R WMAPE + + +SDVWS G + E+ + G ED
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
Query: 181 FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
F + R G P + T E+ + LD C R+P ER
Sbjct: 311 FCSRL--REGMRMRAPEYST--PEIYQIMLD-CWHRDPKER 346
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 95 NIVHCDVKGKNVLV-GPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPLWMAPEVVRG 152
+I+HCD+K +N+L+ P S +K+ DFG++ + G +I Q S + +PEV+ G
Sbjct: 160 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------GQRIYQXIQSRFYRSPEVLLG 213
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIG 190
D+WSLGC ++EM TG+P + GAN + ++
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGEPLFS--GANEVDQMN 249
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 77/303 (25%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAY----LGDDVSYEAPTTSSSCRNL-HLEY 55
M + + + IG G++GTV A +R ++ A L DD + SS+ R + L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKE 57
Query: 56 LPGGTV--------SDLATTL----------------NAYADEITLRSHTYCIVSALKYL 91
L + SD TL N D ++S + ++ L +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 92 HSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-AP 147
HSRN++H D+K +N+L+ N +KLADFG A G+ ++ + LW P
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE-LKLADFGLAR------AFGIPVRCYSAEVVTLWYRPP 170
Query: 148 EVVRG-ECQGPESDVWSLGCTIIEM----------------------VTGKPAWEDFGAN 184
+V+ G + D+WS GC E+ + G P E +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWP-- 228
Query: 185 TLSRIGFSDELPRFPTQSSEL---------GRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
+++++ P +P +S + GRD L L+ P +R S ++ L+HP+
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
Query: 236 VSP 238
P
Sbjct: 289 FCP 291
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPN 111
+EY GG + + ++++ R ++S + Y H+ + H D+K +N L+ G
Sbjct: 93 MEYASGGELFERICNAGRFSED-EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 151
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCT 167
+ +K+ DFG + + + QP+ G+P ++APEV+ + E G +DVWS G T
Sbjct: 152 APRLKICDFGYSKSSVLHS------QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 205
Query: 168 IIEMVTGKPAWED------FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ M+ G +ED F + +P + S E R + + +P +R
Sbjct: 206 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKR 264
Query: 222 WSCDQLLKHPFLQSVSPSD 240
S ++ H + P+D
Sbjct: 265 ISIPEIRNHEWFLKNLPAD 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EY+P G++ D + ++ L + C + YLHS++ +H ++ +NVL+
Sbjct: 94 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--EGMAYLHSQHYIHRNLAARNVLLD 151
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRG-SP-LWMAPEVVRGECQGPESDVWSLGCT 167
N VK+ DFG A +A +++ G SP W APE ++ SDVWS G T
Sbjct: 152 -NDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 168 IIEMVT 173
+ E++T
Sbjct: 210 LYELLT 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN-IVHCDVKGKNVLVGPN 111
+E++ GG++ + +EI L + ++ L YL ++ I+H DVK N+LV
Sbjct: 93 MEHMDGGSLDQVLKEAKRIPEEI-LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR 151
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+KL DFG +G+ S G+ +MAPE ++G +SD+WS+G +++E+
Sbjct: 152 GE-IKLCDFGVSGQLIDSMANSFV----GTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 172 VTGK 175
G+
Sbjct: 207 AVGR 210
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P ++AP ++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 38/251 (15%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA----PTTSSSCRNLHL---------- 53
+ IG+G FG V + R N + +D + +A + + R+ +L
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 54 --------EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
EY+ G++ D L + + L + + A++YL N VH D+ +
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 137
Query: 105 NVLVGPNSSFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVLV ++ K++DFG EA+ DT + ++ W APE +R +SDVWS
Sbjct: 138 NVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWS 190
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
G + E+ + FG RI D +PR D + W
Sbjct: 191 FGILLWEIYS-------FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWH 243
Query: 224 CDQLLKHPFLQ 234
D ++ FLQ
Sbjct: 244 LDAAMRPSFLQ 254
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 76 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 135 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 252
Query: 215 RREPGER 221
+P +R
Sbjct: 253 AHKPEDR 259
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATT 67
K I RG NV + N + + V ++ + + + +EY GG + +
Sbjct: 50 KYIERGEKIAANVKREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFERICN 108
Query: 68 LNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPNSSFVKLADFGAAGEA 126
++++ R ++S + Y H+ + H D+K +N L+ G + +K+ DFG + +
Sbjct: 109 AGRFSED-EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 167
Query: 127 TVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCTIIEMVTGKPAWED-- 180
+ QP+ G+P ++APEV+ + E G +DVWS G T+ M+ G +ED
Sbjct: 168 VLHS------QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 181 ----FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
F + +P + S E R + + +P +R S ++ H +
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEIRNHEWFLKN 280
Query: 237 SPSD 240
P+D
Sbjct: 281 LPAD 284
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 6 RGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD----------------------------V 37
R K +G GSFG V + + +G+ +A D V
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
E +S + +EY+ GG + + ++ E R + IV +YLHS +++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSLDLI 163
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGP 157
+ D+K +N+L+ ++++ DFG A +G G+P +APE++ +
Sbjct: 164 YRDLKPENLLID-QQGYIQVTDFGFAKR-----VKGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 158 ESDVWSLGCTIIEMVTGKPA-WEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRR 216
D W+LG I EM G P + D +I S ++ RFP+ S +D L L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSGKV-RFPSHFSSDLKDLLRNLLQV 275
Query: 217 EPGERW 222
+ +R+
Sbjct: 276 DLTKRF 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 22/146 (15%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SAL YLHS NIV+ D+K +N+L+ V L DFG E ++ G+P
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFC--GTPE 204
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSS 203
++APEV+ + D W LG + EM+ G P P + ++
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP-------------------PFYSRNTA 245
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLK 229
E+ + L+K L+ +P S LL+
Sbjct: 246 EMYDNILNKPLQLKPNITNSARHLLE 271
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 10 IGRGSFGTVNVAVD------RFNGDVFAYLGDDV-----------SYEAPT------TSS 46
IGRGS+G V +AV R + Y +DV S + P T
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 47 SCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
+++L E GG + + + + R ++SA+ Y H N+ H D+K +
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK-DVLSAVAYCHKLNVAHRDLKPE 135
Query: 105 NVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVW 162
N L +S S +KL DFG A K+ G+P +++P+V+ G GPE D W
Sbjct: 136 NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYVSPQVLEG-LYGPECDEW 191
Query: 163 SLGCTIIEMVTGKPAWEDFGANTLSRIGFS--DELPRFPTQS----SELGRDFLDKCLRR 216
S G + ++ G P F A T + + FP + S + + L +
Sbjct: 192 SAGVMMYVLLCGYPP---FSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 217 EPGERWSCDQLLKHP-FLQSVSPSDANTV 244
P +R + Q L+H F + +S S N +
Sbjct: 249 SPKQRITSLQALEHEWFEKQLSSSPRNLL 277
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 9 CIGRGSFGTVNVAVD------RFNGDVFAYLGDDV-----------SYEAPT------TS 45
IGRGS+G V +AV R + Y +DV S + P T
Sbjct: 33 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 46 SSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKG 103
+++L E GG + + + + R ++SA+ Y H N+ H D+K
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK-DVLSAVAYCHKLNVAHRDLKP 151
Query: 104 KNVLVGPNS--SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N L +S S +KL DFG A K+ G+P +++P+V+ G GPE D
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYVSPQVLEG-LYGPECDE 207
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFS--DELPRFPTQS----SELGRDFLDKCLR 215
WS G + ++ G P F A T + + FP + S + + L
Sbjct: 208 WSAGVMMYVLLCGYPP---FSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLT 264
Query: 216 REPGERWSCDQLLKHP-FLQSVSPSDANTV 244
+ P +R + Q L+H F + +S S N +
Sbjct: 265 KSPKQRITSLQALEHEWFEKQLSSSPRNLL 294
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 41/193 (21%)
Query: 81 TYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
Y ++ L+Y+H+ I+H D+K N+ V + +K+ DFG A +A S+ G +
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQAD-SEMXGXVV---- 187
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRIG--------- 190
+ + APEV+ + ++ D+WS+GC + EM+TGK ++ G++ L ++
Sbjct: 188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK--GSDHLDQLKEIMKVTGTP 245
Query: 191 --------FSDE-------LPRFP--------TQSSELGRDFLDKCLRREPGERWSCDQL 227
SDE LP T +S L + L+K L + +R + +
Sbjct: 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 305
Query: 228 LKHPFLQSVSPSD 240
L HP+ +S+ ++
Sbjct: 306 LAHPYFESLHDTE 318
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V +S +K+ DFG A T V +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYV-----AT 191
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 252 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 311
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 312 AYFAQYHDPDDEPVAD 327
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV-GPNS-SFVKLADFG-AAGEATVSDTRGVK----I 136
+ SAL +LH++ I H D+K +N+L PN S VK+ DF +G D + +
Sbjct: 120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 137 QPRGSPLWMAPEVVRGECQ-----GPESDVWSLGCTIIEMVTGKP----------AWEDF 181
P GS +MAPEVV + D+WSLG + +++G P W+
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239
Query: 182 GANTLSRIGFSDELP----RFPTQS----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
A + + + FP + S +D + K L R+ +R S Q+L+HP++
Sbjct: 240 EACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 234 QSVSPSD 240
Q +P +
Sbjct: 300 QGCAPEN 306
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V +S +K+ DFG A T V +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYV-----AT 187
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 248 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 307
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 308 AYFAQYHDPDDEPVAD 323
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYC---IVSALKYLHSRNIVHCDVKGKNVLVGP 110
EY+P G + D N +E+T Y I SA++YL +N +H D+ +N LVG
Sbjct: 108 EYMPYGNLLDYLRECNR--EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 165
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N VK+ADFG + T DT + W APE + +SDVW+ G + E
Sbjct: 166 N-HVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE 223
Query: 171 MVT 173
+ T
Sbjct: 224 IAT 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 170
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 231 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 76 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 135 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 252
Query: 215 RREPGER 221
+P +R
Sbjct: 253 AHKPEDR 259
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 193
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 254 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 284
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 214
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDFG-------------AN 184
+ APE++ + D+WS+GC + E++TG+ P + A+
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAS 274
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
+SR+ + + LP+ P + ++ L D L+K L + +R + + L H
Sbjct: 275 VISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAH 334
Query: 231 PFLQSVSPSDANTVAESSP 249
P+ D + ES P
Sbjct: 335 PYFSQY--HDPDDEPESEP 351
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSC----RNLHL---------- 53
+ IG+G FG V + R N + +D + +A +S R+ +L
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 54 --------EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
EY+ G++ D L + + L + + A++YL N VH D+ +
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 131
Query: 105 NVLVGPNSSFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVLV ++ K++DFG EA+ DT + ++ W APE +R + +SDVWS
Sbjct: 132 NVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWS 184
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
G + E+ + FG RI D +PR D + W
Sbjct: 185 FGILLWEIYS-------FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWH 237
Query: 224 CDQLLKHPFLQ 234
D ++ FLQ
Sbjct: 238 LDAAMRPSFLQ 248
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAG---EATVSDTRGVKIQPRG 140
+V+A+++ HSR +VH D+K +N+L+ KL DFG+ + +D G ++
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY--S 205
Query: 141 SPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPT 200
P W++ R + + VWSLG + +MV G +E + EL FP
Sbjct: 206 PPEWIS----RHQYHALPATVWSLGILLYDMVCGDIPFER------DQEILEAEL-HFPA 254
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQS 235
S + +CL +P R S +++L P++Q+
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA----PTTSSSCRNLHL---------- 53
+ IG+G FG V + R N + +D + +A + + R+ +L
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 54 --------EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
EY+ G++ D L + + L + + A++YL N VH D+ +
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 146
Query: 105 NVLVGPNSSFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVLV ++ K++DFG EA+ DT + ++ W APE +R + +SDVWS
Sbjct: 147 NVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWS 199
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
G + E+ + FG RI D +PR D + W
Sbjct: 200 FGILLWEIYS-------FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWH 252
Query: 224 CDQLLKHPFLQ 234
D ++ FLQ
Sbjct: 253 LDAAMRPSFLQ 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 10 IGRGSFG-------------TVNVAVDRFNGDVFAY---LGDDVSYEAPTTSSSCRNLHL 53
+G GSFG TV+VAV DV + + D + S RNL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 54 EY-----LPGGTVSDLATTLNAYADEI----------TLRSHTYCIVSALKYLHSRNIVH 98
Y P V++LA L + D + TL + + + YL S+ +H
Sbjct: 80 LYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGP 157
D+ +N+L+ VK+ DFG +D V + R P W APE ++
Sbjct: 139 RDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 197
Query: 158 ESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDE-LPRFPTQSSELGRDFLDKCL 214
SD W G T+ EM T G+ W G+ L +I E LPR P + + + +C
Sbjct: 198 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCW 256
Query: 215 RREPGER 221
+P +R
Sbjct: 257 AHKPEDR 263
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 50/238 (21%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ L L + +R + Y ++ AL Y HS+ I+H DVK NV++
Sbjct: 114 FEYINNTDFKQLYQILT----DFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQ 169
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A + V++ R + PE +V + D+WSLGC + M
Sbjct: 170 KKLRLIDWGLAEFYHPAQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
Query: 172 VTGKPAWEDFGANT-----LSRIGFSDEL------------PRFPTQSSELGR------- 207
+ + + N ++++ ++EL P F + R
Sbjct: 227 IFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFI 286
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV-----SPSDANTVAES 247
D LDK LR + +R + + ++HP+ V PS N V S
Sbjct: 287 HSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPSADNAVLSS 344
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 165
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 226 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 168
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 229 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 165
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 226 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 256
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 73/301 (24%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAY----LGDDVSYEAPTTSSSCRNL-HLEY 55
M + + + IG G++GTV A +R ++ A L DD + SS+ R + L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKE 57
Query: 56 LPGGTV--------SDLATTL----------------NAYADEITLRSHTYCIVSALKYL 91
L + SD TL N D ++S + ++ L +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 92 HSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS---PLWM-AP 147
HSRN++H D+K +N+L+ N +KLA+FG A G+ ++ + LW P
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE-LKLANFGLAR------AFGIPVRCYSAEVVTLWYRPP 170
Query: 148 EVVRG-ECQGPESDVWSLGCTIIEMVT-GKPAW-----EDFGANTLSRIGFSDE------ 194
+V+ G + D+WS GC E+ G+P + +D +G E
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 195 --------LPRFPTQSSEL---------GRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
P +P +S + GRD L L+ P +R S ++ L+HP+
Sbjct: 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
Query: 238 P 238
P
Sbjct: 291 P 291
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 165
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 226 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 256
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 162
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 223 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 253
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCIVS-----ALKYLHSRNIVHCDVKGKNVLVG 109
Y P G++ D + L+ L H C ++ + +LH + +H D+K N+L+
Sbjct: 102 YXPNGSLLDRLSCLDGTP---PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILL- 157
Query: 110 PNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+ +F K++DFG A + + G+ + APE +RGE P+SD++S G +
Sbjct: 158 -DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEIT-PKSDIYSFGVVL 215
Query: 169 IEMVTGKPAWED 180
+E++TG PA ++
Sbjct: 216 LEIITGLPAVDE 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 167
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 228 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 258
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N+ +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXXKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EY+P G++ D + ++ L + C + YLH+++ +H ++ +NVL+
Sbjct: 94 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--EGMAYLHAQHYIHRNLAARNVLLD 151
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRG-SP-LWMAPEVVRGECQGPESDVWSLGCT 167
N VK+ DFG A +A +++ G SP W APE ++ SDVWS G T
Sbjct: 152 -NDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 168 IIEMVT 173
+ E++T
Sbjct: 210 LYELLT 215
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 78 RSHTYC--IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
++H Y ++ L+YLHS+ IVH D+K N+L+ + +K++ G A
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT-LKISALGVAEALHPFAADDTC 168
Query: 136 IQPRGSPLWMAPEVVRG--ECQGPESDVWSLGCTIIEMVTGKPAWE-DFGANTLSRIGFS 192
+GSP + PE+ G G + D+WS G T+ + TG +E D IG
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG 228
Query: 193 DELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHP-FLQSVSPSDANTVAESSPRC 251
P D L L EP +R+S Q+ +H F + P++A SP
Sbjct: 229 SY--AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDT 286
Query: 252 VLDW 255
W
Sbjct: 287 KDRW 290
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N+ +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXXKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 95 NIVHCDVKGKNVLV-GPNSSFVKLADFGAAGEATVSDTRGVKI-QPRGSPLWMAPEVVRG 152
+I+HCD+K +N+L+ P +K+ DFG++ + G +I Q S + +PEV+ G
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL------GQRIYQXIQSRFYRSPEVLLG 232
Query: 153 ECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIG 190
D+WSLGC ++EM TG+P + GAN + ++
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFS--GANEVDQMN 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 51 LHLEYLPGGTVSDLATTLN--AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
L L++L GG DL T L+ E ++ + + AL +LHS I++ D+K +N+L+
Sbjct: 104 LILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
Query: 109 GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+KL DFG + E+ + + G+ +MAPEVV +D WS G +
Sbjct: 161 DEEGH-IKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 169 IEMVT------GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
EM+T GK E +++G +P+F + ++ L +R P R
Sbjct: 218 FEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ---SLLRMLFKRNPANRL 270
Query: 223 SC-----DQLLKHPFLQSV 236
+++ +H F ++
Sbjct: 271 GAGPDGVEEIKRHSFFSTI 289
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Query: 53 LEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIE 170
K+ADFG A + D Q P+ W APE +SDVWS G + E
Sbjct: 151 -LVCKVADFGLA--RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 171 MVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
+ T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 51 LHLEYLPGGTVSDLATTLN--AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
L L++L GG DL T L+ E ++ + + AL +LHS I++ D+K +N+L+
Sbjct: 103 LILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 109 GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+KL DFG + E+ + + G+ +MAPEVV +D WS G +
Sbjct: 160 DEEGH-IKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 169 IEMVT------GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
EM+T GK E +++G +P+F + ++ L +R P R
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ---SLLRMLFKRNPANRL 269
Query: 223 SC-----DQLLKHPFLQSV 236
+++ +H F ++
Sbjct: 270 GAGPDGVEEIKRHSFFSTI 288
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 76 TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
T++ + L +LH+ IVH D+K +N+LV + VKLADFG A + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQ----MA 167
Query: 136 IQPRGSPLWM-APEVVRGECQGPESDVWSLGCTIIEMVTGKPAW-----EDFGANTLSRI 189
+ P LW APEV+ D+WS+GC EM KP + D I
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 190 GFSDE--------LPR--FP-----------TQSSELGRDFLDKCLRREPGERWSCDQLL 228
G E LPR FP + E G L + L P +R S + L
Sbjct: 228 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 229 KHPFLQS 235
+H +L
Sbjct: 288 QHSYLHK 294
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 206
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 204
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L I + +KYL + N VH D+ +N+LV NS+
Sbjct: 126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV--NSN 183
Query: 114 FV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
V K++DFG + EAT + T G KI R W APE + SDVWS G
Sbjct: 184 LVCKVSDFGLSRVLEDDPEATYT-TSGGKIPIR----WTAPEAISYRKFTSASDVWSFGI 238
Query: 167 TIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS- 223
+ E++T +P WE + I LP P + +C ++E R
Sbjct: 239 VMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-PMDCPSAIYQLMMQCWQQERARRPKF 297
Query: 224 ------CDQLLKHPFLQSVSPSDANTVAESSPRC 251
D+L++ +P T+A+ PR
Sbjct: 298 ADIVSILDKLIR-------APDSLKTLADFDPRV 324
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 76 TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
T++ + L +LH+ IVH D+K +N+LV + VKLADFG A + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQ----MA 167
Query: 136 IQPRGSPLWM-APEVVRGECQGPESDVWSLGCTIIEMVTGKPAW-----EDFGANTLSRI 189
+ P LW APEV+ D+WS+GC EM KP + D I
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 190 GFSDE--------LPR--FP-----------TQSSELGRDFLDKCLRREPGERWSCDQLL 228
G E LPR FP + E G L + L P +R S + L
Sbjct: 228 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 229 KHPFLQS 235
+H +L
Sbjct: 288 QHSYLHK 294
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 209
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV N VKL DFG + + D+
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLS--RYMEDST 545
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 606 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 636
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 76 TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
T++ + L +LH+ IVH D+K +N+LV + VKLADFG A + +
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQ----MA 175
Query: 136 IQPRGSPLWM-APEVVRGECQGPESDVWSLGCTIIEMVTGKPAW-----EDFGANTLSRI 189
+ P LW APEV+ D+WS+GC EM KP + D I
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
Query: 190 GFSDE--------LPR--FP-----------TQSSELGRDFLDKCLRREPGERWSCDQLL 228
G E LPR FP + E G L + L P +R S + L
Sbjct: 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295
Query: 229 KHPFLQS 235
+H +L
Sbjct: 296 QHSYLHK 302
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 51 LHLEYLPGGTVSDLATTLN--AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
L L++L GG DL T L+ E ++ + + AL +LHS I++ D+K +N+L+
Sbjct: 103 LILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 109 GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+KL DFG + E+ + + G+ +MAPEVV +D WS G +
Sbjct: 160 D-EEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 169 IEMVT------GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
EM+T GK E +++G +P+F + ++ L +R P R
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ---SLLRMLFKRNPANRL 269
Query: 223 SC-----DQLLKHPFLQSV 236
+++ +H F ++
Sbjct: 270 GAGPDGVEEIKRHSFFSTI 288
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARD 193
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 246
Query: 186 LSRIGFSDELPRFPTQ----------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R + + E+ + LD C EP +R + +L++H
Sbjct: 247 YPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 300
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Query: 53 LEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIE 170
K+ADFG A + D Q P+ W APE +SDVWS G + E
Sbjct: 151 -LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 171 MVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
+ T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG A EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLARVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKNTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 122/323 (37%), Gaps = 102/323 (31%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSC------------------- 48
K +G+G++G V ++DR G+V A +++ T +
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 49 ---------RNLHLEYLPGGTVSDLATTLNAYADEITLRSHT-YCIVSALKYLHSRNIVH 98
R+++L + +DL + A E + + Y ++ +KYLHS ++H
Sbjct: 75 LNVLRADNDRDVYLVF--DYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLH 132
Query: 99 CDVKGKNVLVGPNSSFVKLADFGAA-------------------GEATVSDTRGVKIQPR 139
D+K N+L+ VK+ADFG + D + +
Sbjct: 133 RDMKPSNILLNA-ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 140 GSPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRF 198
+ + APE++ G + + D+WSLGC + E++ GKP + G++T++++ + F
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP--GSSTMNQLERIIGVIDF 249
Query: 199 PTQS------------------------------------------------SELGRDFL 210
P+ +E D L
Sbjct: 250 PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLL 309
Query: 211 DKCLRREPGERWSCDQLLKHPFL 233
DK L+ P +R S + LKHPF+
Sbjct: 310 DKLLQFNPNKRISANDALKHPFV 332
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEA----PTTSSSCRNLHL---------- 53
+ IG+G FG V + R N + +D + +A + + R+ +L
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 54 --------EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGK 104
EY+ G++ D L + + L + + A++YL N VH D+ +
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 318
Query: 105 NVLVGPNSSFVKLADFGAAGEAT-VSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
NVLV ++ K++DFG EA+ DT + ++ W APE +R + +SDVWS
Sbjct: 319 NVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWS 371
Query: 164 LGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPR 197
G + E+ + FG RI D +PR
Sbjct: 372 FGILLWEIYS-------FGRVPYPRIPLKDVVPR 398
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +K+ADFG A + D
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTT 263
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 2 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTT--------SSSCRNLHL 53
+ ++ +G + N +++F+ +++ + S + P L
Sbjct: 66 IKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVT 125
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
E+ GG + + + + DE + I+S + YLH NIVH D+K +N+L+ +S
Sbjct: 126 EFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184
Query: 114 F--VKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
+K+ DFG + ++ K++ R G+ ++APEV++ + + DVWS G +
Sbjct: 185 LLNIKIVDFGLSSFF----SKDYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYI 239
Query: 171 MVTGKPAW 178
++ G P +
Sbjct: 240 LLCGYPPF 247
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 76 TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
T++ + L +LH+ IVH D+K +N+LV + VKLADFG A + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQ----MA 167
Query: 136 IQPRGSPLWM-APEVVRGECQGPESDVWSLGCTIIEMVTGKPAW-----EDFGANTLSRI 189
+ P LW APEV+ D+WS+GC EM KP + D I
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 190 GFSDE--------LPR--FP-----------TQSSELGRDFLDKCLRREPGERWSCDQLL 228
G E LPR FP + E G L + L P +R S + L
Sbjct: 228 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 229 KHPFLQS 235
+H +L
Sbjct: 288 QHSYLHK 294
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 82 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 140
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 141 LVCKVADFGLA--RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 199 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 255
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYV-----AT 196
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 257 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 316
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 317 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 355
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 84 IVSALKYLHS-RNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSP 142
++++ Y+H+ +NI H DVK N+L+ N VKL+DFG + +G RG+
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFGESEYMVDKKIKG----SRGTY 214
Query: 143 LWMAPEVVRGEC--QGPESDVWSLGCTIIEMVTGKPAW-------EDFGANTLSRIGFSD 193
+M PE E G + D+WSLG + M + E F I +
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPL 274
Query: 194 ELPRF--PTQS----------SELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
+ F P + S DFL LR+ P ER + + LKH +L + D
Sbjct: 275 DRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIED 333
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 306 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 344
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYV-----AT 190
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 251 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 310
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 311 AYFAQYHDPDDEPVAD 326
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 43 TTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVK 102
T S RN + Y P D T + L +++ + +++L SR +H D+
Sbjct: 123 TYLRSKRNEFVPYKPEDLYKDFLTLEH-------LIXYSFQVAKGMEFLASRKXIHRDLA 175
Query: 103 GKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVW 162
+N+L+ + VK+ DFG A + K R WMAPE + +SDVW
Sbjct: 176 ARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 163 SLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLDK 212
S G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 235 SFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD- 286
Query: 213 CLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYV-----AT 190
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 251 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 310
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 311 AYFAQYHDPDDEPVAD 326
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 111/305 (36%), Gaps = 81/305 (26%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS-SCRNL----HLEY------- 55
+ IG G++G V+ A R G A +++ T + + R L H ++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 56 ------LPGGTVSDLATTLNAYADEIT-------------LRSHTYCIVSALKYLHSRNI 96
+P G + L+ ++ +R Y ++ LKY+HS +
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K N+LV N +K+ DFG A RG+ P +M V +
Sbjct: 180 IHRDLKPSNLLVNENCE-LKIGDFGMA--------RGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 157 PE-----------SDVWSLGCT---------------------IIEMVTGKPAWEDFGAN 184
PE D+WS+GC +I MV G P+ A
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290
Query: 185 TLSRI-GFSDELPR---FPTQSSELGRD-----FLDKCLRREPGERWSCDQLLKHPFLQS 235
R+ + LP P ++ G D L + LR EP R S L+HPFL
Sbjct: 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
Query: 236 VSPSD 240
D
Sbjct: 351 YHDPD 355
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPN 111
+EY GG + + ++++ R ++S + Y HS I H D+K +N L+ G
Sbjct: 95 MEYASGGELYERICNAGRFSED-EARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP 153
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCT 167
+ +K+ DFG + + + QP+ G+P ++APEV+ R E G +DVWS G T
Sbjct: 154 APRLKICDFGYSKSSVLHS------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVT 207
Query: 168 IIEMVTGKPAWED 180
+ M+ G +ED
Sbjct: 208 LYVMLVGAYPFED 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 30/185 (16%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV-GPNS-SFVKLADFGAAGEATVSD-----TRGVKI 136
+ +AL +LH++ I H D+K +N+L P S VK+ DF +++ T
Sbjct: 120 VAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 137 QPRGSPLWMAPEVV-----RGECQGPESDVWSLGCTIIEMVTGKPAWEDF-GAN------ 184
P GS +MAPEVV + D+WSLG + M++G P + GA+
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 185 TLSRI-------GFSDELPRFPTQS----SELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ R+ + FP + S +D + K L R+ +R S Q+L+HP++
Sbjct: 240 EVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 234 QSVSP 238
Q +P
Sbjct: 300 QGQAP 304
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 150
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 151 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 150
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 151 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSP 142
I L+ LH IV+ D+K +N+L+ + ++++D G A V G I+ R G+
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLA----VHVPEGQTIKGRVGTV 349
Query: 143 LWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+MAPEVV+ E D W+LGC + EM+ G+ ++ + R + P +
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEY 408
Query: 203 SE----LGRDFLDKCLRREPGERWSC-----DQLLKHPFLQSVS 237
SE R + L ++P ER C ++ +HP + ++
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L + I S + Y+ N VH D++ N+LVG N
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN- 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 148 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 206 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 81 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 139
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 140 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 198 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 254
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 85 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 143
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 144 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 202 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 258
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 156
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 157 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 209
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 269
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 270 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 328
Query: 251 CVLDWVN 257
DW+N
Sbjct: 329 TTGDWLN 335
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 59/245 (24%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV---GPNSSFVKLADFGAAGEATVSDTRG 133
++S Y I+ + YLH+ ++H D+K N+LV GP VK+AD G A
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 134 VKIQPRGSPLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW----ED------F 181
+ P W APE++ G ++ D+W++GC E++T +P + ED +
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249
Query: 182 GANTLSRI----GFS-----DELPRFPTQSSELGRDF----------------------- 209
+ L RI GF +++ + P S+ L +DF
Sbjct: 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHST-LMKDFRRNTYTNCSLIKYMEKHKVKPDS 308
Query: 210 -----LDKCLRREPGERWSCDQLLKHP-FLQSVSPSDANTVAESSPRCVLDWVNSEFEEE 263
L K L +P +R + +Q ++ P FL+ P+ ++ C + + EF E
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT-----SDVFAGCQIPYPKREFLTE 363
Query: 264 GTSDD 268
DD
Sbjct: 364 EEPDD 368
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 83 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 141
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 142 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 200 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 256
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 316
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 317 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSP 142
I L+ LH IV+ D+K +N+L+ + ++++D G A V G I+ R G+
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLA----VHVPEGQTIKGRVGTV 349
Query: 143 LWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFPTQS 202
+MAPEVV+ E D W+LGC + EM+ G+ ++ + R + P +
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEY 408
Query: 203 SE----LGRDFLDKCLRREPGERWSC-----DQLLKHPFLQSVS 237
SE R + L ++P ER C ++ +HP + ++
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 84 IVSALKYLHSRNIV---HCDVKGKNVLV-------GPNSSFVKLADFGAAGEATVSDTRG 133
I + YLH IV H D+K N+L+ ++ +K+ DFG A E R
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH----RT 169
Query: 134 VKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDF-GANTLSRIGFS 192
K+ G+ WMAPEV+R SDVWS G + E++TG+ + G + +
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Query: 193 DELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKH 230
P+ E ++ C +P R S +L
Sbjct: 230 KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 111/305 (36%), Gaps = 81/305 (26%)
Query: 8 KCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSS-SCRNL----HLEY------- 55
+ IG G++G V+ A R G A +++ T + + R L H ++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 56 ------LPGGTVSDLATTLNAYADEIT-------------LRSHTYCIVSALKYLHSRNI 96
+P G + L+ ++ +R Y ++ LKY+HS +
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 180
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K N+LV N +K+ DFG A RG+ P +M V +
Sbjct: 181 IHRDLKPSNLLVNENCE-LKIGDFGMA--------RGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 157 PE-----------SDVWSLGCT---------------------IIEMVTGKPAWEDFGAN 184
PE D+WS+GC +I MV G P+ A
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 291
Query: 185 TLSRI-GFSDELPR---FPTQSSELGRD-----FLDKCLRREPGERWSCDQLLKHPFLQS 235
R+ + LP P ++ G D L + LR EP R S L+HPFL
Sbjct: 292 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
Query: 236 VSPSD 240
D
Sbjct: 352 YHDPD 356
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L + I S + Y+ N VH D++ N+LVG N
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN- 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 148 LVCKVADFGLA--RLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 206 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 55 YLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSF 114
+L G ++++ + D + Y I+ LKY+HS +I+H D+K N+ V +S
Sbjct: 107 HLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE- 163
Query: 115 VKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVT 173
+K+ DFG T V + + APE++ ++ D+WS+GC + E++T
Sbjct: 164 LKILDFGLCRHTDDEMTGYV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GK---PAWEDF-------------GANTLSRI------GFSDELPRFPTQ--------SS 203
G+ P + GA L +I + L + P ++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAE 246
L D L+K L + +R + Q L H + D VA+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 150
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 151 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 316
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 317 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYAD-----EITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
L +EY GG DL LN + + E +R+ I SAL+YLH I+H D+K +N
Sbjct: 96 LAMEYCEGG---DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 152
Query: 106 VLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
+++ GP K+ D G A E D + + G+ ++APE++ + D WS
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 209
Query: 164 LGCTIIEMVTG----KPAWE 179
G E +TG P W+
Sbjct: 210 FGTLAFECITGFRPFLPNWQ 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 53 LEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+EY+ G + D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 91 MEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 150
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIE 170
K+ADFG A + D Q P+ W APE +SDVWS G + E
Sbjct: 151 -LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 171 MVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
+ T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ + I L I + +KYL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W APE
Sbjct: 146 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTAPEA 198
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+V+ +P WE + + + LP + L +
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQ 258
Query: 208 DFLDKCLRREPGERWSCDQLL 228
LD C ++E R D+++
Sbjct: 259 LMLD-CWQKERNSRPKFDEIV 278
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S TY + ++YL S+ +H D+ +NVLV N + +++ADFG A + D
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMRIADFGLARDINNIDYYKKTT 217
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 316
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 317 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 51 LHLEYLPGGTVSDLATTLNAYAD-----EITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
L +EY GG DL LN + + E +R+ I SAL+YLH I+H D+K +N
Sbjct: 95 LAMEYCEGG---DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151
Query: 106 VLV--GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWS 163
+++ GP K+ D G A E D + + G+ ++APE++ + D WS
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208
Query: 164 LGCTIIEMVTG----KPAWE 179
G E +TG P W+
Sbjct: 209 FGTLAFECITGFRPFLPNWQ 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYV-----AT 192
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 313 AYFAQYHDPDDEPVAD 328
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 45/222 (20%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ L L + +R + Y ++ AL Y HS+ I+H DVK NV++
Sbjct: 119 FEYINNTDFKQLYQILT----DFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQ 174
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPE-VVRGECQGPESDVWSLGCTIIEM 171
++L D+G A + V++ R + PE +V + D+WSLGC + M
Sbjct: 175 KKLRLIDWGLAEFYHPAQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASM 231
Query: 172 VTGKPAWEDFGANT-----LSRIGFSDEL------------PRFPTQSSELGR------- 207
+ + + N ++++ ++EL P F + R
Sbjct: 232 IFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFI 291
Query: 208 -------------DFLDKCLRREPGERWSCDQLLKHPFLQSV 236
D LDK LR + +R + + ++HP+ V
Sbjct: 292 HSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 333
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 51 LHLEYLPGGTVSDLATTLN--AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
L L++L GG DL T L+ E ++ + + L +LHS I++ D+K +N+L+
Sbjct: 107 LILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL 163
Query: 109 GPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
+KL DFG + EA + + G+ +MAPEVV + +D WS G +
Sbjct: 164 D-EEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMAPEVVNRQGHSHSADWWSYGVLM 220
Query: 169 IEMVT------GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERW 222
EM+T GK E +++G +P+F + ++ L +R P R
Sbjct: 221 FEMLTGSLPFQGKDRKETMTLILKAKLG----MPQFLSTEAQ---SLLRALFKRNPANRL 273
Query: 223 -----SCDQLLKHPFLQSV 236
+++ +H F ++
Sbjct: 274 GSGPDGAEEIKRHVFYSTI 292
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYV-----AT 192
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 313 AYFAQYHDPDDEPVAD 328
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMTGYV-----AT 192
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 313 AYFAQYHDPDDEPVAD 328
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 37/198 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAESS 248
+ D VA+ +
Sbjct: 306 AYFAQYHDPDDEPVADPT 323
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGXV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 140 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 192
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 252
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 253 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 311
Query: 251 CVLDWVN 257
DW+N
Sbjct: 312 TTGDWLN 318
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 190
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 251 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 310
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 311 AYFAQYHDPDDEPVAD 326
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 187
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 248 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 307
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 308 AYFAQYHDPDDEPVAD 323
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 192
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 313 AYFAQYHDPDDEPVAD 328
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 181
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 302 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 166 AARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 278 -CWHGEPSQRPTFSELVEH 295
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 39/200 (19%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAESSPR 250
+ D VA+ PR
Sbjct: 306 AYFAQYHDPDDEPVAD--PR 323
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 187
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 248 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 307
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 308 AYFAQYHDPDDEPVAD 323
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 181
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 302 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 190
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 251 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 310
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 311 AYFAQYHDPDDEPVAD 326
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 184
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 244
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 245 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 304
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 305 AYFAQYHDPDDEPVAD 320
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 191
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 252 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 311
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 312 AYFAQYHDPDDEPVAD 327
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARD 193
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 246
Query: 186 LSRIGFSDEL---------PRFPTQSS-ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R P ++ E+ + LD C EP +R + +L++H
Sbjct: 247 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 300
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 205
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 326 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 364
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 399
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 400 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R+EP ER + + L
Sbjct: 458 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL 514
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 166 AARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 278 -CWHGEPSQRPTFSELVEH 295
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 196
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 257 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 316
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 317 AYFAQYHDPDDEPVAD 332
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 183
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 243
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 244 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 303
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 304 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 342
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 208
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 269 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 328
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 329 AYFAQYHDPDDEPVAD 344
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 64/294 (21%)
Query: 1 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNL----HLEYL 56
M ++++ +G G++ TV + ++ A + +E ++ R + L++
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 57 PGGTVSDLATT--------------LNAYADEI-------TLRSHTYCIVSALKYLHSRN 95
T+ D+ T L Y D+ ++ + ++ L Y H +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 96 IVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV-SDTRGVKIQPRGSPLWM-APEVVRGE 153
++H D+K +N+L+ +KLADFG A ++ + T ++ LW P+++ G
Sbjct: 121 VLHRDLKPQNLLINERGE-LKLADFGLARAKSIPTKTYDNEV----VTLWYRPPDILLGS 175
Query: 154 CQ-GPESDVWSLGCTIIEMVTGKPAW------------------------------EDFG 182
+ D+W +GC EM TG+P + E+F
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 183 ANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
+ L P S+ G D L K L+ E R S + +KHPF S+
Sbjct: 236 TYNYPKYRAEALLSHAPRLDSD-GADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 175 AARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 287 -CWHGEPSQRPTFSELVEH 304
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 182
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 243 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 302
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 303 AYFAQYHDPDDEPVAD 318
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 204
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 265 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 324
Query: 231 PFLQSVSPSDANTVA-------ESSPRCVLDWVNSEFEE 262
+ D VA ES + +W + ++E
Sbjct: 325 AYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 363
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 197
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 258 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 317
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 318 AYFAQYHDPDDEPVAD 333
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 197
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 258 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 317
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 318 AYFAQYHDPDDEPVAD 333
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 197
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 258 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 317
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 318 AYFAQYHDPDDEPVAD 333
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 195
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 255
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 256 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 315
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 316 AYFAQYHDPDDEPVAD 331
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 191
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 252 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 311
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 312 AYFAQYHDPDDEPVAD 327
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 182
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 243 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 302
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 303 AYFAQYHDPDDEPVAD 318
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S+ + E++ G++ + I L I + +KYL N
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA-------GEATVSDTRGVKIQPRGSPLWMAPE 148
VH D+ +N+LV NS+ V K++DFG + + T + G KI R W APE
Sbjct: 157 VHRDLAARNILV--NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR----WTAPE 210
Query: 149 VVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELG 206
++ SDVWS G + E+++ +P W+ + ++ I LP S L
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH 270
Query: 207 RDFLDKCLRREPGER-------WSCDQLLKHP-FLQSVSP 238
+ LD C +++ R + D+++++P L++++P
Sbjct: 271 QLMLD-CWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 309
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 181
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 302 AYFAQYHDPDDEPVAD 317
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 191
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 252 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 311
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 312 AYFAQYHDPDDEPVAD 327
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 187
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 248 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 307
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 308 AYFAQYHDPDDEPVAD 323
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 166
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 167 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 219
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 279
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 280 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 338
Query: 251 CVLDWVN 257
DW+N
Sbjct: 339 TTGDWLN 345
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARD 240
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 241 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 293
Query: 186 LSRIGFSDELPRFPTQSS----------ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R + + E+ + LD C EP +R + +L++H
Sbjct: 294 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 347
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESD 160
+N+L+ + VK+ DFG A + D V+ PL WMAPE + +SD
Sbjct: 175 AARNILLS-EKNVVKICDFGLARD-IYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 161 VWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFL 210
VWS G + E+ + GA+ + +E R P ++ E+ + L
Sbjct: 233 VWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 211 DKCLRREPGERWSCDQLLKH 230
D C EP +R + +L++H
Sbjct: 286 D-CWHGEPSQRPTFSELVEH 304
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 204
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 265 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 324
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 325 AYFAQYHDPDDEPVAD 340
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T V +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYV-----AT 205
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 266 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 326 AYFAQYHDPDDEPVAD 341
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 166 AARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 278 -CWHGEPSQRPTFSELVEH 295
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EY+P G++ D ++ L + C + YLH+++ +H + +NVL+
Sbjct: 89 QLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQIC--EGMAYLHAQHYIHRALAARNVLLD 146
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRG-SP-LWMAPEVVRGECQ-GPESDVWSLGC 166
N VK+ DFG A +A +++ G SP W APE ++ EC+ SDVWS G
Sbjct: 147 -NDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLK-ECKFYYASDVWSFGV 203
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 204 TLYELLT 210
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 191 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARD 249
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 250 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 302
Query: 186 LSRIGFSDEL---------PRFPTQSS-ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R P ++ E+ + LD C EP +R + +L++H
Sbjct: 303 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 356
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 50 NLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVG 109
L +EY+P G++ D ++ L + C + YLH+++ +H + +NVL+
Sbjct: 88 QLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQIC--EGMAYLHAQHYIHRALAARNVLLD 145
Query: 110 PNSSFVKLADFGAAGEATVSDTRGVKIQPRG-SP-LWMAPEVVRGECQ-GPESDVWSLGC 166
N VK+ DFG A +A +++ G SP W APE ++ EC+ SDVWS G
Sbjct: 146 -NDRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLK-ECKFYYASDVWSFGV 202
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 203 TLYELLT 209
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 189 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARD 247
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 248 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 300
Query: 186 LSRIGFSDEL---------PRFPTQSS-ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R P ++ E+ + LD C EP +R + +L++H
Sbjct: 301 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 354
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 157 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 211
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 212 AARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 271 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 323
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 324 -CWHGEPSQRPTFSELVEH 341
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 166 AARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 278 -CWHGEPSQRPTFSELVEH 295
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV VKL DFG + + D+
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-VKLGDFGLS--RYMEDST 165
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 226 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 256
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARD 242
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 295
Query: 186 LSRIGFSDEL---------PRFPTQSS-ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R P ++ E+ + LD C EP +R + +L++H
Sbjct: 296 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 349
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 45 SSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDV 101
S+ R+ E++P + + Y D +TL +++ + +++L SR +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPE-----DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 102 KGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
+N+L+ + VK+ DFG A + K R WMAPE + +SDV
Sbjct: 175 AARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 162 WSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDEL---------PRFPTQSS-ELGRDFLD 211
WS G + E+ + GA+ + +E R P ++ E+ + LD
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 212 KCLRREPGERWSCDQLLKH 230
C EP +R + +L++H
Sbjct: 287 -CWHGEPSQRPTFSELVEH 304
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVL 107
L +E+LP G+ L L ++I L+ + I + YL SR VH D+ +NVL
Sbjct: 90 LIMEFLPSGS---LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL 146
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSP-LWMAPEVVRGECQGPESDVWSLGC 166
V VK+ DFG R SP W APE + SDVWS G
Sbjct: 147 VESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGV 205
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 206 TLHELLT 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + EY+ G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLGRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 46/221 (20%)
Query: 81 TYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
Y ++ LKY+HS I+H D+K NV V +S +++ DFG A +A T V
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYV-----A 190
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGANTLSRI-------- 189
+ + APE++ ++ D+WS+GC + E++ GK + D+ + L RI
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-IDQLKRIMEVVGTPS 249
Query: 190 -------------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLL 228
+ LP P + ++ L D L + L + +R S + L
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 229 KHPFL-QSVSPSDA------NTVAESSPRCVLDWVNSEFEE 262
H + Q P D + E+ R + +W ++E
Sbjct: 310 AHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWKELTYQE 350
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 69 NAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE 125
+ Y D +TL +++ + +++L SR +H D+ +N+L+ + VK+ DFG A +
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARD 199
Query: 126 ATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANT 185
K R WMAPE + +SDVWS G + E+ + GA+
Sbjct: 200 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASP 252
Query: 186 LSRIGFSDEL---------PRFPTQSS-ELGRDFLDKCLRREPGERWSCDQLLKH 230
+ +E R P ++ E+ + LD C EP +R + +L++H
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEH 306
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G + D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 150
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 151 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 46/221 (20%)
Query: 81 TYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
Y ++ LKY+HS I+H D+K NV V +S +++ DFG A +A T V
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYV-----A 190
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGANTLSRI-------- 189
+ + APE++ ++ D+WS+GC + E++ GK + D+ + L RI
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-IDQLKRIMEVVGTPS 249
Query: 190 -------------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLL 228
+ LP P + ++ L D L + L + +R S + L
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 229 KHPFL-QSVSPSDA------NTVAESSPRCVLDWVNSEFEE 262
H + Q P D + E+ R + +W ++E
Sbjct: 310 AHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWKELTYQE 350
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRS---HTYCIVSALKYLHSRNIVHCDVKGKNVL 107
L +E+LP G+ L L ++I L+ + I + YL SR VH D+ +NVL
Sbjct: 102 LIMEFLPSGS---LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL 158
Query: 108 VGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSP-LWMAPEVVRGECQGPESDVWSLGC 166
V VK+ DFG R SP W APE + SDVWS G
Sbjct: 159 VESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGV 217
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 218 TLHELLT 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPN 111
+EY GG + + ++++ R ++S + Y H+ + H D+K +N L+ G
Sbjct: 94 MEYASGGELFERICNAGRFSED-EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 152
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCT 167
+ +K+ FG + + + QP+ G+P ++APEV+ + E G +DVWS G T
Sbjct: 153 APRLKICAFGYSKSSVLHS------QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 168 IIEMVTGKPAWED------FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ M+ G +ED F + +P + S E R + + +P +R
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKR 265
Query: 222 WSCDQLLKHPFLQSVSPSD 240
S ++ H + P+D
Sbjct: 266 ISIPEIRNHEWFLKNLPAD 284
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV-GPN 111
+EY GG + + ++++ R ++S + Y H+ + H D+K +N L+ G
Sbjct: 94 MEYASGGELFERICNAGRFSED-EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 152
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGCT 167
+ +K+ FG + + + QP+ G+P ++APEV+ + E G +DVWS G T
Sbjct: 153 APRLKICAFGYSKSSVLHS------QPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 168 IIEMVTGKPAWED------FGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ M+ G +ED F + +P + S E R + + +P +R
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKR 265
Query: 222 WSCDQLLKHPFLQSVSPSD 240
S ++ H + P+D
Sbjct: 266 ISIPEIRNHEWFLKNLPAD 284
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D+ N+LVG N
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGEN- 150
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 151 LVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Query: 73 DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
D +L + Y + +AL YL S+ VH D+ +NVLV VKL DFG + + D+
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-VKLGDFGLS--RYMEDST 545
Query: 133 GVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVTG--KPAWEDFGANTLSRI 189
K P+ WMAPE + SDVW G + E++ KP + + RI
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 190 GFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ LP P L + KC +P R
Sbjct: 606 ENGERLPMPPNCPPTL-YSLMTKCWAYDPSRR 636
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 75 ITLRSHTYCIVSALKYLH--SRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTR 132
I ++ + ++ ++ LH S N+ H D+K NVLV +KL DFG+A + + S+
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN 188
Query: 133 GVKIQPRGSPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWE-DFGANTLSRI 189
I R + APE++ G + D+WS+GC EM+ G+P + D A L I
Sbjct: 189 VAYICSR---YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T + G +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH-TDDEMXGYV----AT 208
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 269 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 328
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 329 AYFAQYHDPDDEPVAD 344
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 19 NVAVDRFNG--DVFAYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSD-LATTLNAYADEI 75
+V + +NG D F Y + S + + + C + +E+ GT+ + D++
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 76 TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK 135
I + Y+HS+ +++ D+K N+ + ++ VK+ DFG T G +
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLV---TSLKNDGKR 178
Query: 136 IQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV-TGKPAWEDFGANTLSRIGFSDE 194
+ +G+ +M+PE + + G E D+++LG + E++ A+E T R G +
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD 238
Query: 195 LPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSP 238
+ F + L L K L ++P +R + ++L+ + SP
Sbjct: 239 I--FDKKEKTL----LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ D+G A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDYGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 63 DLATTLNAYADEITL---RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLAD 119
DLA L+ + TL + +++ L Y+H I+H D+K NVL+ +KLAD
Sbjct: 109 DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLAD 167
Query: 120 FGAAGEATVS-DTRGVKIQPRGSPLWM-APEVVRGECQ-GPESDVWSLGCTIIEMVTGKP 176
FG A +++ +++ + R LW PE++ GE GP D+W GC + EM T P
Sbjct: 168 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
Query: 177 ------------------------AWEDFGANTL---------SRIGFSDELPRFPTQSS 203
W + L + D L +
Sbjct: 228 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 287
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWV 256
L D +DK L +P +R D L H F S PSD + + + +++
Sbjct: 288 AL--DLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYL 339
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 54 EYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D L + Y L I S + Y+ N VH D++ N+LVG N
Sbjct: 259 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN- 317
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG + D Q P+ W APE +SDVWS G + E+
Sbjct: 318 LVCKVADFGLG--RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 172 VT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
T G+ + L ++ +P P + E D + +C R++P ER + + L
Sbjct: 376 TTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL 432
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T + G +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH-TDDEMAGFV----AT 181
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 302 AYFAQYHDPDDEPVAD 317
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 43/218 (19%)
Query: 63 DLATTLNAYADEITL---RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLAD 119
DLA L+ + TL + +++ L Y+H I+H D+K NVL+ +KLAD
Sbjct: 110 DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLAD 168
Query: 120 FGAAGEATVS-DTRGVKIQPRGSPLWM-APEVVRGECQ-GPESDVWSLGCTIIEMVTGKP 176
FG A +++ +++ + R LW PE++ GE GP D+W GC + EM T P
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 177 ------------------------AWEDFGANTL---------SRIGFSDELPRFPTQSS 203
W + L + D L +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 288
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSD 240
L D +DK L +P +R D L H F S PSD
Sbjct: 289 AL--DLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 63 DLATTLNAYADEITL---RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLAD 119
DLA L+ + TL + +++ L Y+H I+H D+K NVL+ +KLAD
Sbjct: 110 DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLAD 168
Query: 120 FGAAGEATVS-DTRGVKIQPRGSPLWM-APEVVRGECQ-GPESDVWSLGCTIIEMVTGKP 176
FG A +++ +++ + R LW PE++ GE GP D+W GC + EM T P
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 177 ------------------------AWEDFGANTL---------SRIGFSDELPRFPTQSS 203
W + L + D L +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 288
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSDANTVAESSPRCVLDWV 256
L D +DK L +P +R D L H F S PSD + + + +++
Sbjct: 289 AL--DLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYL 340
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A D + R
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHT--DDEMXGXVATRW- 207
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 208 --YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 326 AYFAQYHDPDDEPVAD 341
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T + G +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH-TDDEMAGFV----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 43/218 (19%)
Query: 63 DLATTLNAYADEITL---RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLAD 119
DLA L+ + TL + +++ L Y+H I+H D+K NVL+ +KLAD
Sbjct: 110 DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLAD 168
Query: 120 FGAAGEATVS-DTRGVKIQPRGSPLWM-APEVVRGECQ-GPESDVWSLGCTIIEMVTGKP 176
FG A +++ +++ + R LW PE++ GE GP D+W GC + EM T P
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 177 ------------------------AWEDFGANTL---------SRIGFSDELPRFPTQSS 203
W + L + D L +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 288
Query: 204 ELGRDFLDKCLRREPGERWSCDQLLKHPFLQS-VSPSD 240
L D +DK L +P +R D L H F S PSD
Sbjct: 289 AL--DLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DFG A T + G +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH-TDDEMAGFV----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + + + + + + I L +LH R I++ D+K NV++ +
Sbjct: 99 MEYVNGGDLMYHIQQVGKFKEPQAV-FYAAEISIGLFFLHKRGIIYRDLKLDNVMLD-SE 156
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+K+ADFG E + GV + G+P ++APE++ + G D W+ G + EM
Sbjct: 157 GHIKIADFGMCKEHMMD---GVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
Query: 172 VTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSC 224
+ G+P ++ + L + + +P S+ + + P +R C
Sbjct: 214 LAGQPPFDGEDEDELFQ-SIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGC 265
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA--GEATVSDTRGVKIQPRGS 141
+ + YL + +H D+ +N+LVG N K+ADFG + E V T G R
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMG-----RLP 194
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFP 199
WMA E + SDVWS G + E+V+ G P A ++ L + P
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-P 253
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLL 228
+ D + +C R +P ER S Q+L
Sbjct: 254 LNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA--GEATVSDTRGVKIQPRGS 141
+ + YL + +H D+ +N+LVG N K+ADFG + E V T G R
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMG-----RLP 204
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFP 199
WMA E + SDVWS G + E+V+ G P A ++ L + P
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-P 263
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLL 228
+ D + +C R +P ER S Q+L
Sbjct: 264 LNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 53 LEYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 93 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 153 -HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 172 VT 173
T
Sbjct: 211 AT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 53 LEYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 89 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 148
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 149 -HLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 172 VT 173
T
Sbjct: 207 AT 208
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 39 YEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADE-ITLRSHTYCIVS---ALKYLHSR 94
YE C + +E L GG +L + + D+ T R + + S A++YLHS
Sbjct: 80 YENLYAGRKCLLIVMECLDGG---ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 95 NIVHCDVKGKNVLVG---PNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR 151
NI H DVK +N+L PN + +KL DFG A E T
Sbjct: 137 NIAHRDVKPENLLYTSKRPN-AILKLTDFGFAKETT------------------------ 171
Query: 152 GECQGPESDVWSLGCTIIEMVTGKPAWEDF-------GANTLSRIGFSDELPRFP----T 200
GE D+WSLG + ++ G P + G T R+G + FP +
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----FPNPEWS 227
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFL 233
+ SE + + L+ EP +R + + + HP++
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV ++ +K+ADFG A + D
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV ++ +K+ADFG A + D
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 202
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S Y + ++YL S+ +H D+ +NVLV + +K+ADFG A + D
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + +SDVWS G + E+ T
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 102 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 160
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 161 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 219
Query: 173 T 173
T
Sbjct: 220 T 220
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 53 LEYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+E++ G + D N + L I SA++YL +N +H D+ +N LVG N
Sbjct: 86 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 146 -HLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 172 VT 173
T
Sbjct: 204 AT 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 152
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 153 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 173 T 173
T
Sbjct: 212 T 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 152
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 153 HLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 173 T 173
T
Sbjct: 212 T 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 149
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 150 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 173 T 173
T
Sbjct: 209 T 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 177
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 177
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 182
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 149
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 150 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 173 T 173
T
Sbjct: 209 T 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 182
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 53 LEYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+E++ G + D N + L I SA++YL +N +H D+ +N LVG N
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 148 -HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 172 VT 173
T
Sbjct: 206 AT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 148 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 173 T 173
T
Sbjct: 207 T 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 93 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 151
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 152 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210
Query: 173 T 173
T
Sbjct: 211 T 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 148 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 173 T 173
T
Sbjct: 207 T 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 53 LEYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPN 111
+E++ G + D N + L I SA++YL +N +H D+ +N LVG N
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
Query: 112 SSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 148 -HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 172 VT 173
T
Sbjct: 206 AT 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V E T + +E++ G + + I L I + ++YL
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA-----GEATVSDTRGVKIQPRGSPLWMAPEVV 150
VH D+ +N+LV NS+ V K++DFG + V T G KI R W APE +
Sbjct: 167 VHRDLAARNILV--NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR----WTAPEAI 220
Query: 151 RGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRD 208
+ SDVWS G + E+++ +P W+ + + I LP + L +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQL 280
Query: 209 FLDKCLRREPGERWSCDQLL 228
LD C ++E ER +Q++
Sbjct: 281 MLD-CWQKERAERPKFEQIV 299
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTXTAHAGAKFPIK 175
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T+S + E++ G + + I L I S ++YL +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGA-------AGEATVSDTRGVKIQPRGSPLWMAPE 148
VH D+ +N+LV NS+ V K++DFG + + T + + G KI R W APE
Sbjct: 138 VHRDLAARNILV--NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR----WTAPE 191
Query: 149 VVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELG 206
+ SD WS G + E+++ +P W+ + ++ I LP P + L
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 251
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
+ LD C W D+ + F Q VS D
Sbjct: 252 QLMLD-C--------WQKDRNARPRFPQVVSALD 276
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 90 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 148
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 149 HLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 173 T 173
T
Sbjct: 208 T 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S + I ++YL ++VH D+ +N+LV +K++DFG + + D+ +
Sbjct: 152 LISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK-MKISDFGLSRDVYEEDSXVKRS 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDEL 195
Q R WMA E + +SDVWS G + E+VT G + L + +
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR 270
Query: 196 PRFPTQSSELGRDFLDKCLRREPGER 221
P SE + +C ++EP +R
Sbjct: 271 MERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ G +SD T TL + + YL ++H D+ +N LVG
Sbjct: 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N +K++DFG + D + W +PEV +SDVWS G + E
Sbjct: 142 N-QVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 199
Query: 171 MVT-GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
+ + GK +E+ + + GF PR +S ++ C R P +R + +
Sbjct: 200 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWRERPEDRPAFSR 256
Query: 227 LLKH 230
LL+
Sbjct: 257 LLRQ 260
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 54 EYLPGGTVSDLATTLN-AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
E++ G + D N + + L I SA++YL +N +H D+ +N LVG N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN- 149
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
VK+ADFG + T DT + W APE + +SDVW+ G + E+
Sbjct: 150 HLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 173 T 173
T
Sbjct: 209 T 209
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 84/225 (37%), Gaps = 78/225 (34%)
Query: 82 YCI--VSALKYLHSRNIVHCDVKGKNVLVG------------------------PNSSFV 115
YCI + AL YL ++ H D+K +N+L+ S+ +
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 116 KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTG- 174
KL DFG A SD G I R + APEV+ SD+WS GC + E+ TG
Sbjct: 202 KLIDFGCA--TFKSDYHGSIINTRQ---YRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 175 --------------------------------------------KPAWEDFGANTLSRIG 190
K AW + A++++ I
Sbjct: 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE-NASSINSIK 315
Query: 191 FSDE-LPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQ 234
+ LP + EL DFL L+ +P R S +LLKH FL+
Sbjct: 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S + I ++YL +VH D+ +N+LV +K++DFG + + D+ +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK-MKISDFGLSRDVYEEDSXVKRS 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDEL 195
Q R WMA E + +SDVWS G + E+VT G + L + +
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR 270
Query: 196 PRFPTQSSELGRDFLDKCLRREPGER 221
P SE + +C ++EP +R
Sbjct: 271 MERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSD-LATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
S + + + C + +E+ GT+ + D++ I + Y+HS+ +
Sbjct: 98 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL 157
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQG 156
+H D+K N+ + ++ VK+ DFG T G + + +G+ +M+PE + + G
Sbjct: 158 IHRDLKPSNIFL-VDTKQVKIGDFGLV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYG 213
Query: 157 PESDVWSLGCTIIEMV-TGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLR 215
E D+++LG + E++ A+E T R G ++ F + L L K L
Sbjct: 214 KEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI--FDKKEKTL----LQKLLS 267
Query: 216 REPGERWSCDQLLKHPFLQSVSP 238
++P +R + ++L+ + SP
Sbjct: 268 KKPEDRPNTSEILRTLTVWKKSP 290
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 40/189 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ L LH +VH D+ N+L+ N+ + + DF A E T + + R
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNND-ITICDFNLAREDTADANKTHYVTHRW- 198
Query: 142 PLWMAPEVVRGECQGPES--DVWSLGCTIIEM---------------------VTGKPAW 178
+ APE+V + +G D+WS GC + EM V G P
Sbjct: 199 --YRAPELVM-QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 179 E-----------DFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
E D+ N+LS + PT + + D + K L P R S +Q
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 228 LKHPFLQSV 236
L+HP+ +S+
Sbjct: 315 LRHPYFESL 323
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 38/198 (19%)
Query: 78 RSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 137
R Y ++ LKY+HS N++H D+K N+ + +K+ DFG A + +
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 138 PRGSPLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDE- 194
W +P ++ ++ D+W+ GC EM+TGK + GA+ L ++ E
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA--GAHELEQMQLILES 240
Query: 195 ---------------LPRF----------------PTQSSELGRDFLDKCLRREPGERWS 223
+P + P S E DFL++ L P +R +
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISRE-AVDFLEQILTFSPMDRLT 299
Query: 224 CDQLLKHPFLQSVS-PSD 240
++ L HP++ S P D
Sbjct: 300 AEEALSHPYMSIYSFPMD 317
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L S + I ++YL +VH D+ +N+LV +K++DFG + + D+ +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK-MKISDFGLSRDVYEEDSYVKRS 210
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDEL 195
Q R WMA E + +SDVWS G + E+VT G + L + +
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR 270
Query: 196 PRFPTQSSELGRDFLDKCLRREPGER 221
P SE + +C ++EP +R
Sbjct: 271 MERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 40/189 (21%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ L LH +VH D+ N+L+ N+ + + DF A E T + + R
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNND-ITICDFNLAREDTADANKTHYVTHRW- 198
Query: 142 PLWMAPEVVRGECQGPES--DVWSLGCTIIEM---------------------VTGKPAW 178
+ APE+V + +G D+WS GC + EM V G P
Sbjct: 199 --YRAPELVM-QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 179 E-----------DFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQL 227
E D+ N+LS + PT + + D + K L P R S +Q
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 228 LKHPFLQSV 236
L+HP+ +S+
Sbjct: 315 LRHPYFESL 323
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H D+ +N LVG N VK+ADFG + T DT +
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLMT-GDTFTAHAGAKFPIK 175
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 89 TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 148
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 149 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 203
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 204 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 10 IGRGSFGTVNVAVDRFNGDVF-------AYLGDDVSYEAPTTSSSCRNLHLEYLPGG-TV 61
IG G FG V V R V + G + T S CR+ HL L G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 62 SDLATTLNAYADEITLRSHTY-----------------CIVSA--LKYLHSRNIVHCDVK 102
+ + Y + L+ H Y CI +A L YLH+R I+H DVK
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 103 GKNVLVGPNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
N+L+ N FV K+ DFG + + T D + +G+ ++ PE +SDV
Sbjct: 167 SINILLDEN--FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 162 WSLGCTIIEMVTGKPA 177
+S G + E++ + A
Sbjct: 225 YSFGVVLFEVLCARSA 240
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 25/220 (11%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S+ + E++ G++ + I L I + +KYL N
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA-------GEATVSDTRGVKIQPRGSPLWMAPE 148
VH + +N+LV NS+ V K++DFG + + T + G KI R W APE
Sbjct: 131 VHRALAARNILV--NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR----WTAPE 184
Query: 149 VVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELG 206
++ SDVWS G + E+++ +P W+ + ++ I LP S L
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH 244
Query: 207 RDFLDKCLRREPGER-------WSCDQLLKHP-FLQSVSP 238
+ LD C +++ R + D+++++P L++++P
Sbjct: 245 QLMLD-CWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 283
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 291
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 292 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ G +SD T TL + + YL +++H D+ +N LVG
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGE 138
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N +K++DFG + D + W +PEV +SDVWS G + E
Sbjct: 139 N-QVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 196
Query: 171 MVT-GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
+ + GK +E+ + + GF PR +S ++ C + P +R + +
Sbjct: 197 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWKERPEDRPAFSR 253
Query: 227 LLKH 230
LL+
Sbjct: 254 LLRQ 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 279
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 280 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 316
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ DF A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFYLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 291
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 292 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 46/221 (20%)
Query: 81 TYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRG 140
Y ++ LKY+HS I+H D+K NV V + +++ DFG A +A T V
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQADEEMTGYV-----A 182
Query: 141 SPLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGKPAW--EDFGANTLSRI-------- 189
+ + APE++ ++ D+WS+GC + E++ GK + D+ + L RI
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-IDQLKRIMEVVGTPS 241
Query: 190 -------------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLL 228
+ LP P + ++ L D L + L + +R S + L
Sbjct: 242 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 301
Query: 229 KHPFL-QSVSPSDA------NTVAESSPRCVLDWVNSEFEE 262
H + Q P D + E+ R + +W ++E
Sbjct: 302 AHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWKELTYQE 342
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 167 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 225
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 285
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 286 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 322
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 175 VAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 293
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 294 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 330
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA--GEATVSDTRGVKIQPRGS 141
+ + YL + +H ++ +N+LVG N K+ADFG + E V T G R
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMG-----RLP 201
Query: 142 PLWMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFP 199
WMA E + SDVWS G + E+V+ G P A ++ L + P
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-P 260
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLL 228
+ D + +C R +P ER S Q+L
Sbjct: 261 LNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + +L S+N +H DV +NVL+ N K+ DFG A + VK R
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANT----LSRIGFSDELPRF 198
WMAPE + +SDVWS G + E+ + G + N+ L + G+ P F
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 287
Query: 199 PTQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
++ + C EP R + Q+ FLQ + D
Sbjct: 288 APKNI---YSIMQACWALEPTHRPTFQQICS--FLQEQAQED 324
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ FG A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILGFGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + E + G++ +A I L I S +KYL
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 140 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 192
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 252
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 253 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 311
Query: 251 CVLDWVN 257
DW+N
Sbjct: 312 TTGDWLN 318
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 91 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 150
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 151 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 205
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 206 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 59/278 (21%)
Query: 10 IGRGSFGTVNVAVDRFNG-----------------------DVFAY--LGDD---VSYEA 41
IG G FG+V V R +G +V+A+ LG V Y +
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 74
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATT---LNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+ EY GG+++D + + +Y E L+ + L+Y+HS ++VH
Sbjct: 75 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 134
Query: 99 CDVKGKNVLVG----PNSS--------------FVKLADFGAAGEATVSDTRGVKIQPRG 140
D+K N+ + PN++ K+ D G + G
Sbjct: 135 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE------EG 188
Query: 141 SPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFP 199
++A EV++ P++D+++L T++ +P + R G LPR P
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEIRQG---RLPRIP 245
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
S+ + L + +P R S L+KH L S S
Sbjct: 246 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 283
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 95 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 154
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 155 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 209
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 210 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 90 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 149
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 150 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 204
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 205 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 90 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 149
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 150 VLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 204
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 205 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 89 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 148
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 149 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 203
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 204 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 88 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 147
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 148 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 202
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 92 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 151
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 152 VLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 206
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 207 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T+S + E++ G + + I L I S ++YL +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGA-------AGEATVSDTRGVKIQPRGSPLWMAPE 148
VH D+ +N+LV NS+ V K++DFG + + T + + G KI R W APE
Sbjct: 140 VHRDLAARNILV--NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR----WTAPE 193
Query: 149 VVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELG 206
+ SD WS G + E+++ +P W+ + ++ I LP P + L
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 253
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSD 240
+ LD C W D+ + F Q VS D
Sbjct: 254 QLMLD-C--------WQKDRNARPRFPQVVSALD 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + E + G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 90 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 149
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 150 VLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 204
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 205 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ D G A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDAGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 45/188 (23%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-- 141
++ L + H I+H D+K +N+L+ +KL DFG A G+ + S
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQ-LKLGDFGLA------RAFGIPVNTFSSEV 169
Query: 142 -PLWM-APEVVRGECQGPES-DVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFS------ 192
LW AP+V+ G S D+WS GC + EM+TGKP + ++ F
Sbjct: 170 VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN 229
Query: 193 -------DELPRF-----------------PTQSSELG---RDFLDKCLRREPGERWSCD 225
+LP++ P L DFL L+ P R S
Sbjct: 230 ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAK 289
Query: 226 QLLKHPFL 233
Q L HP+
Sbjct: 290 QALHHPWF 297
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 9/181 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
E++ G +SD T TL + + YL ++H D+ +N LVG N
Sbjct: 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN-Q 141
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
+K++DFG + D + W +PEV +SDVWS G + E+ +
Sbjct: 142 VIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 174 -GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLLK 229
GK +E+ + + GF PR +S ++ C R P +R + +LL+
Sbjct: 201 EGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 230 H 230
Sbjct: 258 Q 258
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
+ E T S + E + G++ +A I L I S +KYL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA 168
Query: 97 VHCDVKGKNVLVGPNSSFV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEV 149
VH D+ +N+L+ NS+ V K++DFG + EA + TRG KI R W +PE
Sbjct: 169 VHRDLAARNILI--NSNLVCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIR----WTSPEA 221
Query: 150 VRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGR 207
+ SDVWS G + E+++ +P WE + + + LP + L +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281
Query: 208 DFLDKCLRREPGERWS-------CDQLLKHP----FLQSVSPSDANTVAESSP------R 250
LD C +++ R D+L+++P + S + +N + + S R
Sbjct: 282 LMLD-CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR 340
Query: 251 CVLDWVN 257
DW+N
Sbjct: 341 TTGDWLN 347
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 46 SSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKN 105
+S L ++ +P G + D L + I + YL R +VH D+ +N
Sbjct: 92 TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 151
Query: 106 VLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
VLV VK+ DFG A E G K+ + WMA E + +SDV
Sbjct: 152 VLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDV 206
Query: 162 WSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPRFP 199
WS G T+ E++T G ++ A+ +S I E LP+ P
Sbjct: 207 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 88 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 147
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 148 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 172 VT 173
VT
Sbjct: 205 VT 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 125 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ D G A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDRGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 146
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 147 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 172 VT 173
VT
Sbjct: 204 VT 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G++ + I L I S +KYL + VH D+ +N+LV NS+
Sbjct: 89 EYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV--NSN 146
Query: 114 FV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
V K++DFG + EA + TRG KI R W APE + SDVWS G
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGI 201
Query: 167 TIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS- 223
+ E+++ +P W+ + + I LP L + LD C ++E +R
Sbjct: 202 VMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD-CWQKERSDRPKF 260
Query: 224 ------CDQLLKHP 231
D+L+++P
Sbjct: 261 GQIVNMLDKLIRNP 274
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 89 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 148
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 149 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 172 VT 173
VT
Sbjct: 206 VT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H ++ +N LVG N VK+ADFG + T DT +
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 384
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 104 KNVLVGPNSS----FVKLADFGAAGEATVSDTRGVKIQPRG 140
+N+L GP+ + FV L DF A+G+ T+S T+G K++ G
Sbjct: 32 ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLG 72
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR-GSP 142
+VSA+ YL ++I+H D+K +N+++ + + +KL DFG+A RG G+
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFT-IKLIDFGSAAYL----ERGKLFYTFCGTI 193
Query: 143 LWMAPEVVRGE-CQGPESDVWSLGCTIIEMV 172
+ APEV+ G +GPE ++WSLG T+ +V
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 160 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 219 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 274
Query: 198 FP 199
P
Sbjct: 275 PP 276
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ G +SD T TL + + YL ++H D+ +N LVG
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 138
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N +K++DFG + D + W +PEV +SDVWS G + E
Sbjct: 139 N-QVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 196
Query: 171 MVT-GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
+ + GK +E+ + + GF PR +S ++ C + P +R + +
Sbjct: 197 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWKERPEDRPAFSR 253
Query: 227 LLKH 230
LL+
Sbjct: 254 LLRQ 257
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G++G V +AV+R + A D
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H ++ +N LVG N VK+ADFG + T DT +
Sbjct: 324 ISSAMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 381
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 104 KNVLVGPNSS----FVKLADFGAAGEATVSDTRGVKIQPRG 140
+N+L GP+ + FV L DF A+G+ T+S T+G K++ G
Sbjct: 29 ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLG 69
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G++ + I L I S +KYL + VH D+ +N+LV NS+
Sbjct: 95 EYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV--NSN 152
Query: 114 FV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
V K++DFG + EA + TRG KI R W APE + SDVWS G
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGI 207
Query: 167 TIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS- 223
+ E+++ +P W+ + + I LP L + LD C ++E +R
Sbjct: 208 VMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD-CWQKERSDRPKF 266
Query: 224 ------CDQLLKHP 231
D+L+++P
Sbjct: 267 GQIVNMLDKLIRNP 280
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 146
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 147 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 172 VT 173
VT
Sbjct: 204 VT 205
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ G +SD T TL + + YL ++H D+ +N LVG
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 136
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N +K++DFG + D + W +PEV +SDVWS G + E
Sbjct: 137 N-QVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194
Query: 171 MVT-GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
+ + GK +E+ + + GF PR +S ++ C + P +R + +
Sbjct: 195 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWKERPEDRPAFSR 251
Query: 227 LLKH 230
LL+
Sbjct: 252 LLRQ 255
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 96 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 155
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 156 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 172 VT 173
VT
Sbjct: 213 VT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 152
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 153 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 172 VT 173
VT
Sbjct: 210 VT 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 82 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 141
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 142 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 172 VT 173
VT
Sbjct: 199 VT 200
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 4 WVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD--------------------------V 37
W + +G G++G V +AV+R + A D V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
+ + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQG 156
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 128 HRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 157 PESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 4 WVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD--------------------------V 37
W + +G G++G V +AV+R + A D V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 38 SYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIV 97
+ + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 98 HCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQG 156
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 127 HRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 157 PESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 146
Query: 113 SFVKLADFGAA---GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTII 169
S K+ADFG A +A + G K + W APE + +SDVWS G +
Sbjct: 147 S-CKIADFGLARLIEDAEXTAREGAKFPIK----WTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 170 EMVT 173
E+VT
Sbjct: 202 EIVT 205
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 195 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 250
Query: 198 FP 199
P
Sbjct: 251 PP 252
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 82 YCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS 141
Y I+ LKY+HS +I+H D+K N+ V + +K+ D G A T V +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDGGLARHTDDEMTGYV-----AT 185
Query: 142 PLWMAPEVVRGECQGPES-DVWSLGCTIIEMVTGK---PAWEDF-------------GAN 184
+ APE++ ++ D+WS+GC + E++TG+ P + GA
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 185 TLSRI------GFSDELPRFPTQ--------SSELGRDFLDKCLRREPGERWSCDQLLKH 230
L +I + L + P ++ L D L+K L + +R + Q L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 231 PFLQSVSPSDANTVAE 246
+ D VA+
Sbjct: 306 AYFAQYHDPDDEPVAD 321
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G++ + I L I S +KYL + VH D+ +N+LV NS+
Sbjct: 110 EYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV--NSN 167
Query: 114 FV-KLADFGAA------GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
V K++DFG + EA + TRG KI R W APE + SDVWS G
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGI 222
Query: 167 TIIEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWS- 223
+ E+++ +P W+ + + I LP L + LD C ++E +R
Sbjct: 223 VMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD-CWQKERSDRPKF 281
Query: 224 ------CDQLLKHP 231
D+L+++P
Sbjct: 282 GQIVNMLDKLIRNP 295
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 210 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 265
Query: 198 FP 199
P
Sbjct: 266 PP 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 191 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 246
Query: 198 FP 199
P
Sbjct: 247 PP 248
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 95 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 154
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 155 S-CKIADFGLA--RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 172 VT 173
VT
Sbjct: 212 VT 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 179 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 234
Query: 198 FP 199
P
Sbjct: 235 PP 236
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
Query: 198 FP 199
P
Sbjct: 248 PP 249
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 146
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 147 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 172 VT 173
VT
Sbjct: 204 VT 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + + YL + VH D+ +N LVG VK+ DFG + + +D V +
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQ 201
WM PE + ESDVWS G + E+ T GK W + I EL R P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRA 261
Query: 202 SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
+ C +REP +R S + H LQ+++ +
Sbjct: 262 CPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALAQA 297
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I SA++YL +N +H ++ +N LVG N VK+ADFG + T DT +
Sbjct: 366 ISSAMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 423
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
W APE + +SDVW+ G + E+ T
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 104 KNVLVGPNSS----FVKLADFGAAGEATVSDTRGVKIQPRG 140
+N+L GP+ + FV L DF A+G+ T+S T+G K++ G
Sbjct: 71 ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLG 111
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 198 FP 199
P
Sbjct: 241 PP 242
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
Query: 198 FP 199
P
Sbjct: 244 PP 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 198 FP 199
P
Sbjct: 241 PP 242
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 198 FP 199
P
Sbjct: 241 PP 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV-GPNSSFVKLADFGAA----GEATVSDTRGVKIQP 138
I + YL R +VH D+ +NVLV PN VK+ DFG A G+ + G K+
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPI 183
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKP 176
+ WMA E + +SDVWS G TI E++T GKP
Sbjct: 184 K----WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 92 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 151
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 152 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 172 VT 173
VT
Sbjct: 209 VT 210
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
Query: 198 FP 199
P
Sbjct: 244 PP 245
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
Query: 198 FP 199
P
Sbjct: 243 PP 244
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
Query: 198 FP 199
P
Sbjct: 244 PP 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
Query: 198 FP 199
P
Sbjct: 248 PP 249
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + + YL + VH D+ +N LVG VK+ DFG + + +D V +
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQ 201
WM PE + ESDVWS G + E+ T GK W + I EL R P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRA 255
Query: 202 SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPS 239
+ C +REP +R S + H LQ+++ +
Sbjct: 256 CPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALAQA 291
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 51 LHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L E++ G +SD T TL + + YL ++H D+ +N LVG
Sbjct: 99 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 158
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
N +K++DFG + D + W +PEV +SDVWS G + E
Sbjct: 159 N-QVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 216
Query: 171 MVT-GKPAWEDFGANTLSR---IGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
+ + GK +E+ + + GF PR +S ++ C + P +R + +
Sbjct: 217 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRL---ASTHVYQIMNHCWKERPEDRPAFSR 273
Query: 227 LLKH 230
LL+
Sbjct: 274 LLRQ 277
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 152
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 153 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 172 VT 173
VT
Sbjct: 210 VT 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 198 FP 199
P
Sbjct: 241 PP 242
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
Query: 198 FP 199
P
Sbjct: 243 PP 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
Query: 198 FP 199
P
Sbjct: 248 PP 249
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 51 LHLEYLPGGTVSDL--ATTLNAYADEI--TLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
+ +EY GT+ DL + LN DE R I+ AL Y+HS+ I+H D+K N+
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ----ILEALSYIHSQGIIHRDLKPMNI 147
Query: 107 LVGPNSSFVKLADFGAAGEATVS------DTRGVK------IQPRGSPLWMAPEVVRGEC 154
+ + + VK+ DFG A S D++ + G+ +++A EV+ G
Sbjct: 148 FIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 155 QGPES-DVWSLGCTIIEMV 172
E D++SLG EM+
Sbjct: 207 HYNEKIDMYSLGIIFFEMI 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 182 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 237
Query: 198 FP 199
P
Sbjct: 238 PP 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA----GEATVSDTRGVKIQPR 139
I + YL R +VH D+ +NVLV VK+ DFG A E G K+ +
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 140 GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSRIGFSDE-LPR 197
WMA E + +SDVWS G T+ E++T G ++ A+ +S I E LP+
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 198 FP 199
P
Sbjct: 241 PP 242
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H D++ N+LV
Sbjct: 97 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL 156
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 157 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 172 VT 173
VT
Sbjct: 214 VT 215
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 48/221 (21%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEY----------- 55
GK IG G+FG + + + + + A + + AP LHLEY
Sbjct: 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-------QLHLEYRFYKQLGSGDG 66
Query: 56 -------------------LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
L G ++ DL + T+ ++S ++Y+HS+N+
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 97 VHCDVKGKNVLVG----PNSSFVKLADFGAAGEATVSDTRGVKIQPR------GSPLWMA 146
++ DVK +N L+G + + DFG A E +T+ I R G+ +M+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKK-HIPYREHKSLTGTARYMS 185
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS 187
G+ Q D+ +LG + + G W+ A+TL
Sbjct: 186 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 226
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 79 SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
S +Y + + +L S+N +H D+ +N+L+ + K+ DFG A + VK
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + ESDVWS G + E+ +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 79 SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
S +Y + + +L S+N +H D+ +N+L+ + K+ DFG A + VK
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + ESDVWS G + E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + + YL + VH D+ +N LVG VK+ DFG + + +D V +
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQ 201
WM PE + ESDVWS G + E+ T GK W + I EL R P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRA 284
Query: 202 SSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
+ C +REP +R S + H LQ+++
Sbjct: 285 CPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALA 318
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 59/278 (21%)
Query: 10 IGRGSFGTVNVAVDRFNG-----------------------DVFAY--LGDD---VSYEA 41
IG G FG+V V R +G +V+A+ LG V Y +
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATT---LNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+ EY GG+++D + + +Y E L+ + L+Y+HS ++VH
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 136
Query: 99 CDVKGKNVLVG----PNSS--------------FVKLADFGAAGEATVSDTRGVKIQPRG 140
D+K N+ + PN++ K+ D G + G
Sbjct: 137 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE------EG 190
Query: 141 SPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFP 199
++A EV++ P++D+++L T++ +P + R G LPR P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG---RLPRIP 247
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
S+ + L + +P R S L+KH L S S
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 285
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 79 SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
S +Y + + +L S+N +H D+ +N+L+ + K+ DFG A + VK
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + ESDVWS G + E+ +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 59/278 (21%)
Query: 10 IGRGSFGTVNVAVDRFNG-----------------------DVFAY--LGDD---VSYEA 41
IG G FG+V V R +G +V+A+ LG V Y +
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 78
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATT---LNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+ EY GG+++D + + +Y E L+ + L+Y+HS ++VH
Sbjct: 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 138
Query: 99 CDVKGKNVLVG----PNSS--------------FVKLADFGAAGEATVSDTRGVKIQPRG 140
D+K N+ + PN++ K+ D G + G
Sbjct: 139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE------EG 192
Query: 141 SPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFP 199
++A EV++ P++D+++L T++ +P + R G LPR P
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG---RLPRIP 249
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
S+ + L + +P R S L+KH L S S
Sbjct: 250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 79 SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
S +Y + + +L S+N +H D+ +N+L+ + K+ DFG A + VK
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + ESDVWS G + E+ +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 100/279 (35%), Gaps = 91/279 (32%)
Query: 70 AYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAA------ 123
Y E+ +++ Y ++ +KY+HS I+H D+K N LV + S VK+ DFG A
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS-VKVCDFGLARTVDYP 209
Query: 124 ----------------GEATVSDTRGVKIQPRGSPL---WMAPEVVRGECQGPES-DVWS 163
T T+ +K Q G + + APE++ + E+ DVWS
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS 269
Query: 164 LGCTIIEM---------------------------------------------------- 171
+GC E+
Sbjct: 270 IGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN 329
Query: 172 VTGKPAWEDFGA----------NTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ G P+ ED A + +D RFP S++ L + L P +R
Sbjct: 330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSAD-AIHLLKRMLVFNPNKR 388
Query: 222 WSCDQLLKHPFLQSVSPSDANTVAESSPRCVL-DWVNSE 259
+ ++ L HPF + V ++ T A R DW+N +
Sbjct: 389 ITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMD 427
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 69 NAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAG---- 124
N + E T++ +V AL YL ++ I+H D+K N+L+ + V + DF A
Sbjct: 109 NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPR 167
Query: 125 EATVSDTRGVKIQPRGSPLWMAPEVV---RGECQGPESDVWSLGCTIIEMVTGKPAWEDF 181
E ++ G K +MAPE+ +G D WSLG T E++ G+ +
Sbjct: 168 ETQITTMAGTKP-------YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220
Query: 182 GANTLSRI--GFSDELPRFPTQSSELGRDFLDKCLRREPGERWS 223
+ + I F + +P+ S+ L K L P +R+S
Sbjct: 221 SSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + + + + + + I L +L S+ I++ D+K NV++ +
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SE 478
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+K+ADFG E GV + G+P ++APE++ + G D W+ G + EM
Sbjct: 479 GHIKIADFGMCKENIWD---GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535
Query: 172 VTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSC 224
+ G+ +E + L + + +P S+ + + PG+R C
Sbjct: 536 LAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGC 587
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+EY+ GG + + + + + + I L +L S+ I++ D+K NV++ +
Sbjct: 100 MEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SE 157
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPR-GSPLWMAPEVVRGECQGPESDVWSLGCTIIEM 171
+K+ADFG E GV + G+P ++APE++ + G D W+ G + EM
Sbjct: 158 GHIKIADFGMCKENIWD---GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
Query: 172 VTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSC 224
+ G+ +E + L + + +P S+ + + PG+R C
Sbjct: 215 LAGQAPFEGEDEDELFQ-SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLV-GPNSSFVKLADFGAA----GEATVSDTRGVKIQP 138
I + YL R +VH D+ +NVLV PN VK+ DFG A G+ + G K+
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPI 206
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKP 176
+ WMA E + +SDVWS G TI E++T GKP
Sbjct: 207 K----WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 59/278 (21%)
Query: 10 IGRGSFGTVNVAVDRFNG-----------------------DVFAY--LGDD---VSYEA 41
IG G FG+V V R +G +V+A+ LG V Y +
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 42 PTTSSSCRNLHLEYLPGGTVSDLATT---LNAYADEITLRSHTYCIVSALKYLHSRNIVH 98
+ EY GG+++D + + +Y E L+ + L+Y+HS ++VH
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 136
Query: 99 CDVKGKNVLVG----PNSS--------------FVKLADFGAAGEATVSDTRGVKIQPRG 140
D+K N+ + PN++ K+ D G + G
Sbjct: 137 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE------EG 190
Query: 141 SPLWMAPEVVR-GECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDELPRFP 199
++A EV++ P++D+++L T++ +P + R G LPR P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG---RLPRIP 247
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVS 237
S+ + L + +P R S L+KH L S S
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 285
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 47 SCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
S L +YLP G++ D L + I + YL +VH ++ +NV
Sbjct: 105 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNV 164
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
L+ + S V++ADFG A D + + + + WMA E + +SDVWS G
Sbjct: 165 LLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 223
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 224 TVWELMT 230
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 79 SHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP 138
S +Y + + +L S+N +H D+ +N+L+ + K+ DFG A VK
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 139 RGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
R WMAPE + ESDVWS G + E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 47 SCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
S L +YLP G++ D L + I + YL +VH ++ +NV
Sbjct: 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNV 146
Query: 107 LVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGC 166
L+ + S V++ADFG A D + + + + WMA E + +SDVWS G
Sbjct: 147 LLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 205
Query: 167 TIIEMVT 173
T+ E++T
Sbjct: 206 TVWELMT 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSP 142
I + ++ RN +H D++ N+LV ++S V K+ADFG A + D + P
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILV--SASLVCKIADFGLA--RVIEDNEYTAREGAKFP 348
Query: 143 L-WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSR-IGFSDELPRFP 199
+ W APE + +SDVWS G ++E+VT G+ + + R + +PR P
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-P 407
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
E + + +C + P ER + + ++QSV D T ES
Sbjct: 408 ENCPEELYNIMMRCWKNRPEERPTFE------YIQSVL-DDFYTATESQ 449
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 84 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 142
Query: 114 FVKLADFGAAG---EATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIE 170
VK++DFG + + + +RG K R SP PEV+ +SD+W+ G + E
Sbjct: 143 VVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 171 MVT-GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
+ + GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 199 IYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEY----------- 55
GK IG G+FG + + + + + A + + AP LHLEY
Sbjct: 5 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP-------QLHLEYRFYKQLGSAGE 57
Query: 56 --------------------LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRN 95
L G ++ DL + T+ ++S ++Y+HS+N
Sbjct: 58 GLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 96 IVHCDVKGKNVLVG----PNSSFVKLADFGAAGEATVSDTRGVKIQPR------GSPLWM 145
+++ DVK +N L+G + + DFG A E +T+ I R G+ +M
Sbjct: 118 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKK-HIPYREHKSLTGTARYM 176
Query: 146 APEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS 187
+ G+ Q D+ +LG + + G W+ A+TL
Sbjct: 177 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMA 146
+KYL +N VH D+ +NVL+ N + K++DFG + D+ PL W A
Sbjct: 123 MKYLEEKNFVHRDLAARNVLL-VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVT 173
PE + SDVWS G T+ E ++
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 53 LEYLPGGTVSDLATTLNAYA--DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L+ + GG DL L+ + E +R + I+ L+++H+R +V+ D+K N+L+
Sbjct: 271 LDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGC 166
+ V+++D G A + + K +P G+ +MAPEV+ +G +D +SLGC
Sbjct: 328 HGH-VRISDLGLACDFS-------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 167 TIIEMVTGKPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +++ G + I + ELP + S EL R L+ L+R+ R
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPEL-RSLLEGLLQRDVNRR 436
Query: 222 WSC-----DQLLKHPFLQSV 236
C ++ + PF +S+
Sbjct: 437 LGCLGRGAQEVKESPFFRSL 456
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSP 142
I + ++ RN +H D++ N+LV ++S V K+ADFG A + D + P
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILV--SASLVCKIADFGLA--RVIEDNEYTAREGAKFP 175
Query: 143 L-WMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSR-IGFSDELPRFP 199
+ W APE + +SDVWS G ++E+VT G+ + + R + +PR P
Sbjct: 176 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-P 234
Query: 200 TQSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
E + + +C + P ER + + ++QSV
Sbjct: 235 ENCPEELYNIMMRCWKNRPEERPTFE------YIQSV 265
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 53 LEYLPGGTVSDLATTLNAYA--DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L+ + GG DL L+ + E +R + I+ L+++H+R +V+ D+K N+L+
Sbjct: 270 LDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 326
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGC 166
+ V+++D G A + + K +P G+ +MAPEV+ +G +D +SLGC
Sbjct: 327 HGH-VRISDLGLACDFS-------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 378
Query: 167 TIIEMVTGKPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +++ G + I + ELP + S EL R L+ L+R+ R
Sbjct: 379 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPEL-RSLLEGLLQRDVNRR 435
Query: 222 WSC-----DQLLKHPFLQSV 236
C ++ + PF +S+
Sbjct: 436 LGCLGRGAQEVKESPFFRSL 455
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEI-TLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D A ++ L + + + Y+ N +H D++ N+LVG N
Sbjct: 83 EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-NG 141
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
K+ADFG A + D Q P+ W APE +SDVWS G + E+
Sbjct: 142 LICKIADFGLA--RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 172 VT 173
VT
Sbjct: 200 VT 201
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 10 IGRGSFGTVNVAVDRFNGDVF-------AYLGDDVSYEAPTTSSSCRNLHLEYLPGG-TV 61
IG G FG V V R V + G + T S CR+ HL L G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 62 SDLATTLNAYADEITLRSHTY-----------------CIVSA--LKYLHSRNIVHCDVK 102
+ + Y + L+ H Y CI +A L YLH+R I+H DVK
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 103 GKNVLVGPNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDV 161
N+L+ N FV K+ DFG + + T + +G+ ++ PE +SDV
Sbjct: 167 SINILLDEN--FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 162 WSLGCTIIEMVTGKPA 177
+S G + E++ + A
Sbjct: 225 YSFGVVLFEVLCARSA 240
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 53 LEYLPGGTVSDLATTLNAYA--DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L+ + GG DL L+ + E +R + I+ L+++H+R +V+ D+K N+L+
Sbjct: 271 LDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGC 166
+ V+++D G A + + K +P G+ +MAPEV+ +G +D +SLGC
Sbjct: 328 HGH-VRISDLGLACDFS-------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 167 TIIEMVTGKPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +++ G + I + ELP + S EL R L+ L+R+ R
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPEL-RSLLEGLLQRDVNRR 436
Query: 222 WSC-----DQLLKHPFLQSV 236
C ++ + PF +S+
Sbjct: 437 LGCLGRGAQEVKESPFFRSL 456
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 53 LEYLPGGTVSDLATTLNAYA--DEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGP 110
L+ + GG DL L+ + E +R + I+ L+++H+R +V+ D+K N+L+
Sbjct: 271 LDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Query: 111 NSSFVKLADFGAAGEATVSDTRGVKIQPR---GSPLWMAPEVV-RGECQGPESDVWSLGC 166
+ V+++D G A + + K +P G+ +MAPEV+ +G +D +SLGC
Sbjct: 328 HGH-VRISDLGLACDFS-------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 167 TIIEMVTGKPAWEDFGANTLSRIG-----FSDELPRFPTQSSELGRDFLDKCLRREPGER 221
+ +++ G + I + ELP + S EL R L+ L+R+ R
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPEL-RSLLEGLLQRDVNRR 436
Query: 222 WSC-----DQLLKHPFLQSV 236
C ++ + PF +S+
Sbjct: 437 LGCLGRGAQEVKESPFFRSL 456
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 77 LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKI 136
L Y + +++L ++ VH D+ +NVLV + VK+ DFG A + V+
Sbjct: 174 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLARDIMSDSNYVVRG 232
Query: 137 QPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-------GKPAWEDFGANTLSRI 189
R WMAPE + +SDVWS G + E+ + G P +F L +
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF--YKLIQN 290
Query: 190 GFSDELPRFPTQ 201
GF + P + T+
Sbjct: 291 GFKMDQPFYATE 302
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 75 ITLRSHTYCIVSALKYLHSR-NIVHCDVKGKNVLVG-----PNSSFVKLADFGAAGEATV 128
I ++ + ++ L Y+H R I+H D+K +NVL+ N +K+AD G A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 129 SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSR 188
T ++ + + +PEV+ G G +D+WS C I E++TG +E ++ ++
Sbjct: 191 HYTNSIQTRE-----YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 189 --------IGFSDELPRFPTQSSELGRDFLD 211
I ELP + ++ + R F +
Sbjct: 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 3 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAYLGDD-------------------------- 36
W + +G G+ G V +AV+R + A D
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 37 VSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
V + + + L LEY GG + D + E + + +++ + YLH I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 97 VHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RGECQ 155
H D+K +N+L+ + +K++DFG A ++ + + G+ ++APE++ R E
Sbjct: 126 THRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 156 GPESDVWSLGCTIIEMVTGKPAWE 179
DVWS G + M+ G+ W+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 75 ITLRSHTYCIVSALKYLHSR-NIVHCDVKGKNVLVG-----PNSSFVKLADFGAAGEATV 128
I ++ + ++ L Y+H R I+H D+K +NVL+ N +K+AD G A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 129 SDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSR 188
T ++ + + +PEV+ G G +D+WS C I E++TG +E ++ ++
Sbjct: 191 HYTNSIQTRE-----YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 189 --------IGFSDELPRFPTQSSELGRDFLD 211
I ELP + ++ + R F +
Sbjct: 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 54 EYLPGGTVSDLATTLNAYADEIT-LRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
EY+ G++ D T + I L I + ++ RN +H +++ N+LV
Sbjct: 83 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTL 142
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
S K+ADFG A + D + P+ W APE + +SDVWS G + E+
Sbjct: 143 S-CKIADFGLA--RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 172 VT 173
VT
Sbjct: 200 VT 201
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 134 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 193 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 20 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 79
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 80 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 137 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 178
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 196 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 82
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 83 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 181
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 201 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 88 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 186
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 140 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 199 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 26 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 86 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 143 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 184
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 201 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 88 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 186
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 48/221 (21%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEY----------- 55
GK IG G+FG + + + + + A + + AP LHLEY
Sbjct: 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-------QLHLEYRFYKQLGSGDG 66
Query: 56 -------------------LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
L G ++ DL + T+ ++S ++Y+HS+N+
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 97 VHCDVKGKNVLVG----PNSSFVKLADFGAAGEATVSDTRGVKIQPR------GSPLWMA 146
++ DVK +N L+G + + DF A E +T+ I R G+ +M+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK-HIPYREHKSLTGTARYMS 185
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS 187
G+ Q D+ +LG + + G W+ A+TL
Sbjct: 186 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 226
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 139 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 198 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 25 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 84
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 85 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 142 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 183
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 161 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 220 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 259
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 47 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 106
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 107 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 164 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 200 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 27 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 87 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 185
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 200 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 27 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 87 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 185
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +KYL S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 160 VAKGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 219 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 258
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 46 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 105
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 106 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 163 GMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 204
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 63/210 (30%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--------SFVKLADFGAAGEATVSD--TRG 133
++ AL Y+H VH VK ++L+ + S + + G + V D
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR-QRVVHDFPKYS 195
Query: 134 VKIQPRGSPLWMAPEVVRGECQG--PESDVWSLGCTIIEMVTGKPAWEDFGAN------- 184
VK+ P W++PEV++ QG +SD++S+G T E+ G ++D A
Sbjct: 196 VKVLP-----WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL 250
Query: 185 ------------------------TLSRIGFSDEL------------PRFPTQS--SELG 206
+++ G SD L P P S
Sbjct: 251 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF 310
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
F+++CL+R P R S LL H F + +
Sbjct: 311 HHFVEQCLQRNPDARPSASTLLNHSFFKQI 340
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 48/221 (21%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEY----------- 55
GK IG G+FG + + + + + A + + AP LHLEY
Sbjct: 35 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-------QLHLEYRFYKQLGSGDG 87
Query: 56 -------------------LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
L G ++ DL + T+ ++S ++Y+HS+N+
Sbjct: 88 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 147
Query: 97 VHCDVKGKNVLVG----PNSSFVKLADFGAAGEATVSDTRGVKIQPR------GSPLWMA 146
++ DVK +N L+G + + DF A E +T+ I R G+ +M+
Sbjct: 148 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK-HIPYREHKSLTGTARYMS 206
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS 187
G+ Q D+ +LG + + G W+ A+TL
Sbjct: 207 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 247
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 63/210 (30%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNS--------SFVKLADFGAAGEATVSD--TRG 133
++ AL Y+H VH VK ++L+ + S + + G + V D
Sbjct: 121 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR-QRVVHDFPKYS 179
Query: 134 VKIQPRGSPLWMAPEVVRGECQG--PESDVWSLGCTIIEMVTGKPAWEDFGAN------- 184
VK+ P W++PEV++ QG +SD++S+G T E+ G ++D A
Sbjct: 180 VKVLP-----WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL 234
Query: 185 ------------------------TLSRIGFSDEL------------PRFPTQS--SELG 206
+++ G SD L P P S
Sbjct: 235 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF 294
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFLQSV 236
F+++CL+R P R S LL H F + +
Sbjct: 295 HHFVEQCLQRNPDARPSASTLLNHSFFKQI 324
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 51 LHLEYLPGGTVSDL--ATTLNAYADEI--TLRSHTYCIVSALKYLHSRNIVHCDVKGKNV 106
+ +EY T+ DL + LN DE R I+ AL Y+HS+ I+H D+K N+
Sbjct: 92 IQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ----ILEALSYIHSQGIIHRDLKPMNI 147
Query: 107 LVGPNSSFVKLADFGAAGEATVS------DTRGVK------IQPRGSPLWMAPEVVRGEC 154
+ + + VK+ DFG A S D++ + G+ +++A EV+ G
Sbjct: 148 FIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 155 QGPES-DVWSLGCTIIEMV 172
E D++SLG EM+
Sbjct: 207 HYNEKIDMYSLGIIFFEMI 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 124 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENXYKAQTHGKWPVKWY 181
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 120 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 177
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWE 202
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 118 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 175
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 130 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 187
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 140 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 197
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 140 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 197
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 124 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 181
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGS-PL-WM 145
+KYL N VH D+ +NVL+ + K++DFG + +A +D K Q G P+ W
Sbjct: 138 MKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 195
Query: 146 APEVVRGECQGPESDVWSLGCTIIE 170
APE + +SDVWS G + E
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 157
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 158 VVKVSDFGLS-RYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 217 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFV-KLADFGAAGEATVSDTRGVKIQPRGSP 142
I + ++ RN +H D++ N+LV ++S V K+ADFG A ++ +
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILV--SASLVCKIADFGLA-----------RVGAKFPI 333
Query: 143 LWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWEDFGANTLSR-IGFSDELPRFPT 200
W APE + +SDVWS G ++E+VT G+ + + R + +PR P
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PE 392
Query: 201 QSSELGRDFLDKCLRREPGERWSCDQLLKHPFLQSVSPSDANTVAESS 248
E + + +C + P ER + + ++QSV D T ES
Sbjct: 393 NCPEELYNIMMRCWKNRPEERPTFE------YIQSVL-DDFYTATESQ 433
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 83 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 141
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 142 VVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 201 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 140 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 199 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 26 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 86 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 143 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 184
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 202 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 29 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 89 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 187
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 88 LKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMA 146
+KYL +N VH ++ +NVL+ N + K++DFG + D+ PL W A
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVT 173
PE + SDVWS G T+ E ++
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 147 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 206 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 245
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 33 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 92
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 93 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 150 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 191
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 90 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 148
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 149 VVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 208 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 263
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 201 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 88 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 202 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 29 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 89 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD LDK
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMLDK 187
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 201 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 88 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 186
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 157
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 158 VVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 217 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEA------TVSDTRGVKIQ 137
+ +K+L S+ VH D+ +N ++ + VK+ADFG A + +V + G K+
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 138 PRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT-GKPAWED 180
+ WMA E ++ + +SDVWS G + E++T G P + D
Sbjct: 260 VK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 66 TTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVL--VGPNSSF----VKLAD 119
++L + +E+ R H C+ + +HC VK N + +G S F + + D
Sbjct: 87 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 146
Query: 120 FGAAGEATVSDTRGVKIQPRGSPLWMAPEV--------VRGECQGPE-SDVWSLGCTIIE 170
F V G+ ++ GSPL + P + +R E P D+ G + +
Sbjct: 147 F---SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 171 MVTGKPAWEDFGANTLSRIGFSDELPRFPTQSSELG--RDFLDK 212
+ + + + +R DE +F + ++ G RD DK
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDK 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 137
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 138 VVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 197 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 69 NAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV 128
N + + + + + +KYL N VH D+ +NVL+ + K++DFG + +A
Sbjct: 463 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALR 520
Query: 129 SDTRGVKIQPRGS-PL-WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
+D K Q G P+ W APE + +SDVWS G + E +
Sbjct: 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 75 ITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGV 134
+TL ++ I A+ YL S N VH D+ +N+LV + VKL DFG + + D
Sbjct: 109 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SPECVKLGDFGLS--RYIEDEDYY 165
Query: 135 KIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEMVT--GKPAWEDFGANTLSRIGF 191
K P+ WM+PE + SDVW + E+++ +P + + + +
Sbjct: 166 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK 225
Query: 192 SDELPRFPTQSSELGRDFLDKCLRREPGER 221
D LP+ P + + +C +P +R
Sbjct: 226 GDRLPK-PDLCPPVLYTLMTRCWDYDPSDR 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR---- 139
I A+++LHS+ ++H D+K N+ + VK+ DFG + + P
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 140 ------GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
G+ L+M+PE + G + D++SLG + E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G + + + L + A++YL S+ +H D+ +N LV +
Sbjct: 84 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG 142
Query: 114 FVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
VK++DFG + + D + + W PEV+ +SD+W+ G + E+ +
Sbjct: 143 VVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Query: 174 -GKPAWEDF-GANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQLL 228
GK +E F + T I L R P +SE + C + ER + LL
Sbjct: 202 LGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E P G + +TL ++ I A+ YL S N VH D+ +N+LV +
Sbjct: 91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SP 149
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
VKL DFG + + D K P+ WM+PE + SDVW + E+
Sbjct: 150 ECVKLGDFGLS--RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207
Query: 172 VT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
++ +P + + + + D LP+ P + + +C +P +R
Sbjct: 208 LSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDR 258
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 69 NAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATV 128
N + + + + + +KYL N VH D+ +NVL+ + K++DFG + +A
Sbjct: 464 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL-VTQHYAKISDFGLS-KALR 521
Query: 129 SDTRGVKIQPRGS-PL-WMAPEVVRGECQGPESDVWSLGCTIIEMVT 173
+D K Q G P+ W APE + +SDVWS G + E +
Sbjct: 522 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 53 LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNS 112
+E P G + +TL ++ I A+ YL S N VH D+ +N+LV +
Sbjct: 103 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SP 161
Query: 113 SFVKLADFGAAGEATVSDTRGVKIQPRGSPL-WMAPEVVRGECQGPESDVWSLGCTIIEM 171
VKL DFG + + D K P+ WM+PE + SDVW + E+
Sbjct: 162 ECVKLGDFGLS--RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
Query: 172 VT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGER 221
++ +P + + + + D LP+ P + + +C +P +R
Sbjct: 220 LSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDR 270
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I + ++YL S ++VH D+ +NVLV + VK++D G E +D +
Sbjct: 154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDE 194
WMAPE + +SD+WS G + WE F G+S++
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVL---------WEVFSYGLQPYCGYSNQ 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 78 RSHTYC------IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDT 131
R H C I A+++LHS+ ++H D+K N+ + VK+ DFG +
Sbjct: 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEE 219
Query: 132 RGVKIQPR----------GSPLWMAPEVVRGECQGPESDVWSLGCTIIEMV 172
+ P G+ L+M+PE + G + D++SLG + E++
Sbjct: 220 EQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
I + ++YL S ++VH D+ +NVLV + VK++D G E +D +
Sbjct: 137 IAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREVYAADYYKLLGNSLLPIR 195
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDE 194
WMAPE + +SD+WS G + WE F G+S++
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVL---------WEVFSYGLQPYCGYSNQ 237
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 84 IVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPL 143
+ + + YL R VH D+ +N LVG N VK+ADFG + +D
Sbjct: 183 VAAGMAYLSERKFVHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 144 WMAPEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLSRIGFSDE 194
WM PE + ESDVW+ G + WE F G + E
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVL---------WEIFSYGLQPYYGMAHE 283
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 21/195 (10%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G++ T + + L + + ++YL VH D+ +NVLV N
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL- 188
Query: 114 FVKLADFGAA-----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
K++DFG + T G KI R W APE + SDVWS G +
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 169 IEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
E++ +P W + +S + LP P + C W D+
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDC--------WHKDR 295
Query: 227 LLKHPFLQSVSPSDA 241
+ F Q VS DA
Sbjct: 296 AQRPRFSQIVSVLDA 310
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 50 NLHLEYL-PGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLV 108
NL+L+ L VSD L + I+L I S + +LHS I+H D+K +N+LV
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQ---IASGVAHLHSLKIIHRDLKPQNILV 166
Query: 109 GPNSSF------------VKLADFGAAGEATVSDT--RGVKIQPRGSPLWMAPEVVRGEC 154
+S F + ++DFG + R P G+ W APE++
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST 226
Query: 155 QGPES---DVWSLGCTIIEMVT-GKPAWEDF---GANTLSRIGFSDELPRFPTQS-SELG 206
+ + D++S+GC +++ GK + D +N + I DE+ +S
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEA 286
Query: 207 RDFLDKCLRREPGERWSCDQLLKHPFL 233
D + + + +P +R + ++L+HP
Sbjct: 287 TDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 88/221 (39%), Gaps = 48/221 (21%)
Query: 7 GKCIGRGSFGTVNVAVDRFNGDVFAYLGDDVSYEAPTTSSSCRNLHLEY----------- 55
GK IG G+FG + + + + + A + + AP LHLEY
Sbjct: 9 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP-------QLHLEYRFYKQLSATEG 61
Query: 56 -------------------LPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNI 96
L G ++ DL + T+ +++ ++Y+H++++
Sbjct: 62 VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 121
Query: 97 VHCDVKGKNVLVG----PNSSFVKLADFGAAGEATVSDTRGVKIQPR------GSPLWMA 146
++ DVK +N LVG + + DFG A E +T+ I R G+ +M+
Sbjct: 122 IYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKK-HIPYREHKSLTGTARYMS 180
Query: 147 PEVVRGECQGPESDVWSLGCTIIEMVTGKPAWEDFGANTLS 187
G+ Q D+ +LG + + G W+ A+TL
Sbjct: 181 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 21/195 (10%)
Query: 54 EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSS 113
EY+ G++ T + + L + + ++YL VH D+ +NVLV N
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL- 188
Query: 114 FVKLADFGAA-----GEATVSDTRGVKIQPRGSPLWMAPEVVRGECQGPESDVWSLGCTI 168
K++DFG + T G KI R W APE + SDVWS G +
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 169 IEMVT--GKPAWEDFGANTLSRIGFSDELPRFPTQSSELGRDFLDKCLRREPGERWSCDQ 226
E++ +P W + +S + LP P + C W D+
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDC--------WHKDR 295
Query: 227 LLKHPFLQSVSPSDA 241
+ F Q VS DA
Sbjct: 296 AQRPRFSQIVSVLDA 310
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,451,306
Number of Sequences: 62578
Number of extensions: 523941
Number of successful extensions: 4085
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 1219
Number of HSP's gapped (non-prelim): 1567
length of query: 408
length of database: 14,973,337
effective HSP length: 101
effective length of query: 307
effective length of database: 8,652,959
effective search space: 2656458413
effective search space used: 2656458413
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)