BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042750
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/313 (51%), Positives = 214/313 (68%), Gaps = 54/313 (17%)
Query: 31 SHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEH- 89
+ ++ TSFP++A+A++GILAT FLLVSYY+FVIKCCLNWHRIDIL RFSLSR RRN +
Sbjct: 27 ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86
Query: 90 LIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFG----------ERSFCECAVCLNEFQ 139
L+ +SP L +RGLDE+VIRAIPIF+FKK+ ++ G E+ EC+VCL+EFQ
Sbjct: 87 LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146
Query: 140 ENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTP 199
+ EKLRIIPNC H+FHIDCIDVWLQ+NANCPLCRT +S T+ P DR+ APS++P
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPP-----DRVSAPSTSP 201
Query: 200 QDPSPYTENVINSDEDFVVIELGNHHSTDQT------LLATQERLNSGEL----SGHSIS 249
++ ++ + ++VVIELG+ +D+ LL QER NSG L + +SIS
Sbjct: 202 ENLV-----MLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSIS 256
Query: 250 PSPRKLDQRFVHKRARKLHK-----------------------PIRRSFSMDSSADPKLY 286
PSP+KLD+ + ++ RKLHK PIRRS SMDSSAD +LY
Sbjct: 257 PSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLY 316
Query: 287 LAIQEAVQQKRQV 299
LA+QEA+++ R+V
Sbjct: 317 LAVQEAIRKNREV 329
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 283 bits (725), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 217/357 (60%), Gaps = 59/357 (16%)
Query: 31 SHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHL 90
+ +S T+FP++AIA++GILAT FLLVSYYIFVIKCCLNWH+IDI RR R + L
Sbjct: 34 TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRR---RRRSSDQNPL 90
Query: 91 IAHSPALETRGLDEAVIRAIPIFQFKKK---ASRDFGERSFCECAVCLNEFQENEKLRII 147
+ +SP RGLDE+ IRAIP+F+FKK+ A + ++ EC+VCLNEFQE+EKLRII
Sbjct: 91 MIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRII 150
Query: 148 PNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTPQDPSPYTE 207
PNC HVFHIDCID+WLQ NANCPLCRTS+S + D I APSS P++ SP++
Sbjct: 151 PNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEAS-----FTLDLISAPSS-PRENSPHSR 204
Query: 208 N-------VINSDEDFVVIELGNHHSTDQ------TLLATQERLNSGELSG----HSISP 250
N V+ D+DFVVIELG + ++ L QER+ S E+S S+SP
Sbjct: 205 NRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSP 264
Query: 251 SPRKLDQRFVHKRARKLHK----------------------PIRRSFSMDSSADPKLYLA 288
P K R ++K+ RK HK PIRRS SMDSS D +LYLA
Sbjct: 265 LPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLA 324
Query: 289 IQEAVQQK-RQVTEASPIEGCSSRS-------KRFFFNFGHGSRGSRSAVLPVYSEP 337
+QE + ++ RQ+ A E SS KR FF+FG S++LPVY EP
Sbjct: 325 VQEEISRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSSSILPVYLEP 381
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 9/138 (6%)
Query: 43 IAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETRG- 101
IA++GIL + +LVSYY + K C H+ +L+ N E + + + T G
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNG---EGFFSSTQRISTNGD 115
Query: 102 -LDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCID 160
L+E++I++I ++++K + F + S +C+VCL+EF+ENE LR++P C H FH+ CID
Sbjct: 116 GLNESMIKSITVYKYK--SGDGFVDGS--DCSVCLSEFEENESLRLLPKCNHAFHLPCID 171
Query: 161 VWLQSNANCPLCRTSISS 178
WL+S++NCPLCR ++
Sbjct: 172 TWLKSHSNCPLCRAFVTG 189
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 46/215 (21%)
Query: 41 IAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETR 100
+ IA++GILA+ F+LVSYY + K C HR RR + S + I+ +
Sbjct: 59 LLIALIGILASAFILVSYYTLISKYC---HR----RRHNSSSTSAAAINRISSDYTWQGT 111
Query: 101 G---------------------LDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQ 139
LDE++I++I +++++K F E S +C+VCL+EFQ
Sbjct: 112 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDG--FVESS--DCSVCLSEFQ 167
Query: 140 ENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTP 199
ENE LR++P C H FH+ CID WL+S++NCPLCR I +++ L +I+ +
Sbjct: 168 ENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTEN--- 224
Query: 200 QDPSPYTENVINSDEDFVVI---ELGNHHSTDQTL 231
N I++ +D VV+ +L N S ++T+
Sbjct: 225 --------NSISTGDDSVVVVNLDLENSRSRNETV 251
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 27/189 (14%)
Query: 41 IAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSP----- 95
+ IAI GI AT FLL +YY V K C N D + R ++ L +SP
Sbjct: 61 LVIAIFGIFATAFLLAAYYTLVSKYCAN----DTTNEAASESGRSDI-ILDVNSPERGDQ 115
Query: 96 ----ALE--TRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPN 149
ALE T GLD+ +I+ I F+ KK ++ + + +C++CL EF E+E LR++P
Sbjct: 116 DDPFALESSTAGLDDTLIKKIGFFKLKKH--QNGFKINGTDCSICLGEFNEDESLRLLPK 173
Query: 150 CGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTPQDPSPYTENV 209
C H FH+ CID WL+S++NCPLCR I PTT P ++ + +T NV
Sbjct: 174 CNHTFHVVCIDRWLKSHSNCPLCRAKI----IVPTTQQPEHHVVV-----MNLDRFTSNV 224
Query: 210 INSDEDFVV 218
+++ + VV
Sbjct: 225 GSAEGNVVV 233
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 36/321 (11%)
Query: 25 IFGSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCC--LNWHRIDILRRFSLSR 82
+ G+ + +S F + IAI+G+LA+ FLLVSYY F+ K C ++ R + S
Sbjct: 42 VAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGA 101
Query: 83 NRRNLEHLIAHSPALETR-----------GLDEAVIRAIPIFQFKKKASRDFGERSFCEC 131
++R GLDE +I I + +++ R G +C
Sbjct: 102 AYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYR----RGDGFVHTTDC 157
Query: 132 AVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDR 191
+VCL EF + E LR++P C H FH CID WL+S++NCPLCR +I+ F
Sbjct: 158 SVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANIT-----------FVT 206
Query: 192 IIAPSSTPQDPSPYTENVINSDEDFVVIELGNHHSTDQTLLATQERLNSGELSGHSISPS 251
+ S P+ +P N+ E VV++ + +Q ++ + H
Sbjct: 207 VGLASPEPEGCAPGETGGDNTHEVVVVMDGLENLCEEQQEAVSRASTADDD---HDAKDV 263
Query: 252 PRKLDQRFVHKRARKLHKPIRR-SFSMDSSADPKLYLA--IQEAVQQKRQVT-EASPIEG 307
+++ R+ P +R + S D D ++ +A +QE+++ + E+ + G
Sbjct: 264 AEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESMEDELTAARESGLLAG 323
Query: 308 CSSRSKRFFFNFGHGSRGSRS 328
+ S+R G RG RS
Sbjct: 324 GAGTSRRCHGENSKG-RGGRS 343
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 27 GSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRN 86
GS S +S P +AI ++ +L + F + ++ I+ CL R + N
Sbjct: 49 GSDVSGDSSRFDPTMAILMI-VLVSVFFFLGFFSVYIRRCLE-------RVMGMDYGNPN 100
Query: 87 LEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRI 146
+ + RGLD ++I P FQ+ + G+ + EC+VCLNEF+++E LR+
Sbjct: 101 DAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEAL-ECSVCLNEFEDDETLRL 159
Query: 147 IPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
IP C HVFH CID WL+S+ CPLCR +
Sbjct: 160 IPKCCHVFHPGCIDAWLRSHTTCPLCRADL 189
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 7/110 (6%)
Query: 92 AHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCG 151
A + + +RGLD VI+++P+F F + +D ECAVCL+EF+E+E R++PNC
Sbjct: 85 AATSVVASRGLDPNVIKSLPVFTFSDETHKDP-----IECAVCLSEFEESETGRVLPNCQ 139
Query: 152 HVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDR--IIAPSSTP 199
H FH+DCID+W S++ CPLCR+ + S +T +R +IA S P
Sbjct: 140 HTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 25/202 (12%)
Query: 31 SHNSDTSFPVIAI-----AIVGILATGFLLVSYYIF--VIKCCLNWHRIDILRRFSLS-- 81
S +S +S I+I A++ IL TGF LV+ + V + ++ D ++
Sbjct: 73 SQDSSSSLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEE 132
Query: 82 --RNRRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQ 139
++R ++H I + T GL +++I +I I +K+ ER+ +C VCLNEF+
Sbjct: 133 EFQDREQVDHPIW---LIRTTGLQQSIINSITICNYKRGDG--LIERT--DCPVCLNEFE 185
Query: 140 ENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISS-TTTTPTTFLPFDRIIAPSST 198
E+E LR++P C H FHI CID WL S+ NCPLCR I+ + TTP P + T
Sbjct: 186 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVE------VT 239
Query: 199 PQDPSPYTENVINSDEDFVVIE 220
P + EN +ED IE
Sbjct: 240 PGGSGSHLENDGVDEEDHGEIE 261
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 45 IVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETRGLDE 104
+ +L T F L I+ C + R F RNR A+ + GLD
Sbjct: 49 VFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYF---RNR-------ANDGSSRRGGLDN 98
Query: 105 AVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQ 164
AV+ + P+F + G + ECA+CLNE +++E +R++P C H+FHIDCID WL
Sbjct: 99 AVVESFPVFAYSSVKESKIGSKDL-ECAICLNELEDHETVRLLPICNHLFHIDCIDTWLY 157
Query: 165 SNANCPLCRTSISSTTTTP 183
S+A CP+CR+++++ + P
Sbjct: 158 SHATCPVCRSNLTAKSNKP 176
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
Query: 84 RRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEK 143
+R L+ L L GLD+A+I A+P+F +K+ G + +CAVCL EF E++K
Sbjct: 105 QRQLQQLFH----LHDSGLDQALIDALPVFLYKEIK----GTKEPFDCAVCLCEFSEDDK 156
Query: 144 LRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISS 178
LR++PNC H FHIDCID WL SN+ CPLCR ++ S
Sbjct: 157 LRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 100 RGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCI 159
RGLD +V+ P F + ++ G+ ECA+CLNEF+++E LR++P C HVFH CI
Sbjct: 98 RGLDVSVVETFPTFLYSDVKTQKLGKGEL-ECAICLNEFEDDETLRLLPKCDHVFHPHCI 156
Query: 160 DVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTPQDPSPYTENVINS--DEDFV 217
D WL+++ CP+CR +++ + P P Q E V+ + E V
Sbjct: 157 DAWLEAHVTCPVCRANLAEQVAEGESVEPGG--TEPDLELQQVVVNPEPVVTAPVPEQLV 214
Query: 218 VIELGNHHSTDQTLLATQERLNSGELSGHSISPSPRKLDQRFVHKRARKLHKPIRRSFSM 277
E+ + + + + + +GHS+ P + +RF + + K I + + +
Sbjct: 215 TSEVDSRRLPGVPVDLKRVKFSRSHTTGHSVV-QPGECTERFTLRLPEDVRKRIMKDWKL 273
Query: 278 DSSADPKLYLAIQEAVQQKRQVTEASPIEGCSSRSKRFFF 317
+ + L + +R PI+ +RS R+ F
Sbjct: 274 NRTNS---LLVLPRGGSSRR----GKPIDRSRARSDRWLF 306
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 96 ALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFH 155
A RGLD I P F + + ++ G+ + ECA+CLNEF+++E LR++P C HVFH
Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGKGAL-ECAICLNEFEDDETLRLLPKCDHVFH 148
Query: 156 IDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFD 190
CI WLQ + CP+CRT+++ T P + D
Sbjct: 149 PHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETD 183
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 26/183 (14%)
Query: 9 IHASQALPPIRSPSNSI-FGSRSSHNSDTSFPVIAIAIVGI-LATGFLLVSYYIFVIKCC 66
IH ++AL P S + ++ ++ +S + V+ + I G+ L FL V Y IF
Sbjct: 87 IHETEALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIF----- 141
Query: 67 LNWHRIDILRR----FSLSRNRRNLEHLIAHSPALE------TRGLDEAVIRAIPIFQFK 116
LR+ F + N + SP L+ GLD+ I A+P+F +
Sbjct: 142 ------KFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAIDALPVFLYG 195
Query: 117 KKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
E+ F +CAVCLNEF + +KLR++P C H FH+ CID WL SN+ CPLCR S+
Sbjct: 196 NVTISL--EQPF-DCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
Query: 177 SST 179
S++
Sbjct: 253 STS 255
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 41 IAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILR-RFSLSRNRRNLEHLIAHSPALET 99
I I +V + GF V + F + R R S RR ++ P
Sbjct: 54 IFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFR 113
Query: 100 RGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCI 159
RGLD +R++P++++ K A++ E +C +CL++F+E E +++IP+CGHVFH+DC+
Sbjct: 114 RGLDSQAVRSLPVYRYTK-AAKQRNE----DCVICLSDFEEGETVKVIPHCGHVFHVDCV 168
Query: 160 DVWLQSNANCPLCRTS 175
D WL S CPLCR++
Sbjct: 169 DTWLSSYVTCPLCRSN 184
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query: 89 HLIAHSPALETRGLDEAVIRAIPIFQFKKKASRD---FGERSFC---ECAVCLNEFQENE 142
H ++SP GLD++VI+ +P+F + A G+ S +CAVCL EF+E +
Sbjct: 112 HYSSYSPY----GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGD 167
Query: 143 KLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTP 199
+R +P C H FH++CID WL+S+ NCPLCRT+I + T PF ++AP P
Sbjct: 168 YVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRP 224
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 39 PVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALE 98
PV+ + V L F +V IF + + R I R + E + L
Sbjct: 50 PVVVVITVLFLVI-FFMVFGSIFCRRSNAQFSRSSIFRS-----TDADAESQVVRIRRLT 103
Query: 99 TRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDC 158
RGLD I P F + + + G + ECAVCL EF+++E LR++P C HVFH DC
Sbjct: 104 ARGLDAEAIETFPTFLYSEVKAVRIG-KGGVECAVCLCEFEDDETLRLMPPCCHVFHADC 162
Query: 159 IDVWLQSNANCPLCRTSI 176
+DVWL ++ CPLCR +
Sbjct: 163 VDVWLSEHSTCPLCRADL 180
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 34 SDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAH 93
SD + VI I + I G V C W + S+ N + +
Sbjct: 11 SDLTLLVITIILFAIFIVGLASV---------CFRWTSRQFYSQESI--NPFTDSDVESR 59
Query: 94 SPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHV 153
+ RGLDEA+I + P F + + R G ECAVC+ EF+++E LR++P C HV
Sbjct: 60 TSITAVRGLDEAIINSFPTFLYSEVKERRIGIGGV-ECAVCICEFEDHETLRLMPECCHV 118
Query: 154 FHIDCIDVWLQSNANCPLCRTSI 176
FH DC+ VWL ++ CPLCR +
Sbjct: 119 FHADCVSVWLSDHSTCPLCRVDL 141
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 12/102 (11%)
Query: 84 RRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKK-------KASRDFGERSFCECAVCLN 136
+R L+ L L GLD+A I A+P+F +K+ + F +CAVCL
Sbjct: 94 QRQLQQLFH----LNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPF-DCAVCLC 148
Query: 137 EFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISS 178
EF E +KLR++P C H FH++CID WLQSN+ CPLCR ++ S
Sbjct: 149 EFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS 190
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 21 PSNSIFGSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSL 80
P+NSI + S +S +IAI ++ I + + ++ CCL+ I R +
Sbjct: 37 PTNSIRQTNLSADS-----IIAIVVLAIFIS--------LGMVSCCLHC----IFYREEI 79
Query: 81 SRNRRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQE 140
+++ H A RGL++ VI + P F + + G + ECA+CL+EF++
Sbjct: 80 GAAGQDVLHSRAR------RGLEKEVIESFPTFLYSEVKGLKIG-KGGVECAICLSEFED 132
Query: 141 NEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFD 190
E LR +P C H FH +CIDVWL S + CP+CR ++S +L D
Sbjct: 133 QETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLNMD 182
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 101 GLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCID 160
GLD +VI P F + + G+ + EC VCLNEF+++E LR+IP C HVFH CID
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEAL-ECPVCLNEFEDDETLRLIPQCCHVFHPGCID 147
Query: 161 VWLQSNANCPLCRTSI 176
WL+S CPLCR ++
Sbjct: 148 AWLRSQTTCPLCRANL 163
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 34 SDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAH 93
SD P +AI I G+ + F L + KC N R + R+ R + L
Sbjct: 34 SDLFKPSLAI-ITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNR 92
Query: 94 SPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHV 153
S GLD+ I ++P F+F G + EC+VCL++F++ E LR++P C H
Sbjct: 93 SSRFS--GLDKKAIESLPFFRFSALK----GLKQGLECSVCLSKFEDVEILRLLPKCRHA 146
Query: 154 FHIDCIDVWLQSNANCPLCRTSIS 177
FHI CID WL+ +A CPLCR ++
Sbjct: 147 FHIGCIDQWLEQHATCPLCRNRVN 170
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 93 HSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGH 152
H + T GL + I +I + FKK G EC+VCLNEF+E+E LR++P C H
Sbjct: 101 HVWQIPTVGLHRSAINSITVVGFKKGEGIIDGT----ECSVCLNEFEEDESLRLLPKCSH 156
Query: 153 VFHIDCIDVWLQSNANCPLCRTSISSTTTTP 183
FH++CID WL S+ NCPLCR + T P
Sbjct: 157 AFHLNCIDTWLLSHKNCPLCRAPVLLITEPP 187
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 99 TRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDC 158
+RGL + VI + P F + + G + ECA+CLNEF++ E LR++P C H FH C
Sbjct: 97 SRGLGKDVINSFPSFLYSQVKGLKIG-KGGVECAICLNEFEDEETLRLMPPCSHAFHASC 155
Query: 159 IDVWLQSNANCPLCRTSI 176
IDVWL S + CP+CR S+
Sbjct: 156 IDVWLSSRSTCPVCRASL 173
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 72 IDILRRFSLSRNR---RNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSF 128
+ + RF L R R R L + H + RGL+ VI ++P F + D S
Sbjct: 49 LHLYARFVLRRRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTV---GATDGVAASA 105
Query: 129 CECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLP 188
ECAVCL+ +E +K R +PNC H+FH+DC+D WL + + CP+CRT + P
Sbjct: 106 TECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVE----------P 155
Query: 189 FDRI-IAPSSTPQDPSPYTENVINSDEDFVVIELGNHHSTDQTLLATQERLNS 240
R+ P P +P + ++ + + V + S ++T+++ RLNS
Sbjct: 156 RPRLEPEPREGPVGTAP--QLLVETRLNLTVEAASSSSSDNKTVVSPASRLNS 206
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 102 LDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDV 161
LD V+ IPIF + K E EC+VCL+EF+E+++ R++P CGHVFH+DCID
Sbjct: 88 LDPTVLEKIPIFVYSVKTH----ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDT 143
Query: 162 WLQSNANCPLCRTSI 176
W +S ++CPLCR +
Sbjct: 144 WFRSRSSCPLCRAPV 158
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Query: 69 WHRIDILRRFSLSRNRRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSF 128
++R +LR S NR P+ GL+ ++I+++PIF F + F
Sbjct: 21 YYRWYLLR--SSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTAL-FA---- 73
Query: 129 CECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
EC+VCL+EF++NE R++PNC H FH+ CID+W S+++CPLCR+ I
Sbjct: 74 MECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 20 SPSNSIFGSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFS 79
+PS +I S ++ NSD + A+ I G + VS ++ LRR
Sbjct: 14 TPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVW-------------LRR-- 58
Query: 80 LSRNRRNLEHLIAHSP----ALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCL 135
L+ R + SP A +GL + V++++P F ++ F ECA+CL
Sbjct: 59 LAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPES---EKFAECAICL 115
Query: 136 NEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCR 173
EF ++LR++P CGH FH+ CID WL S+++CP CR
Sbjct: 116 AEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 HNSDTSF-PVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDIL--RRFSLSRNRRNLE 88
HN +S P IA+ I + A L ++V C + + +RF+++R
Sbjct: 48 HNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYY 107
Query: 89 HLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIP 148
+ + G+D +VI ++P+F+F + G + ECAVCL F+ E LR++P
Sbjct: 108 NGGGVVGGRKNSGIDRSVIESLPVFRFGALS----GHKDGLECAVCLARFEPTEVLRLLP 163
Query: 149 NCGHVFHIDCIDVWLQSNANCPLCRTSI 176
C H FH++C+D WL +++ CPLCR +
Sbjct: 164 KCKHAFHVECVDTWLDAHSTCPLCRYRV 191
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 16/145 (11%)
Query: 39 PVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEH----LIAHS 94
P +A+ + G+LA F L + KCC ID LR S R R + S
Sbjct: 35 PSLAV-VTGVLAIMFALTFVLLVYAKCC----HID-LRSGSGDRRRHDRRLRQGIFFNRS 88
Query: 95 PALETR--GLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGH 152
A R GLD+ I ++P+F+F G + +C+VCL++F+ E LR++P C H
Sbjct: 89 TASSDRFSGLDKTAIESLPLFRFSALK----GSKQGLDCSVCLSKFESVEILRLLPKCRH 144
Query: 153 VFHIDCIDVWLQSNANCPLCRTSIS 177
FHI CID WL+ +A CPLCR +S
Sbjct: 145 AFHIGCIDQWLEQHATCPLCRDRVS 169
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 32 HNSDTS--FPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEH 89
H S T+ F + ++ L T F+L++ + +I C + + RR
Sbjct: 35 HRSATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQ----------ARAPPRRAFRS 84
Query: 90 LIAHSPALETRG-------LDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENE 142
+H P LD+ V+ A P + +R + ECAVCL EF +++
Sbjct: 85 TASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSD 144
Query: 143 KLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISS 178
+LR++P C HVFH DCID WL + CPLCR ++++
Sbjct: 145 ELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTA 180
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 80 LSRNRRNLEHLIAHSPA--LETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNE 137
+ RN R + A S L GLD ++++I + FK DF + ECAVCL++
Sbjct: 72 IGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFK---CTDF--KDGLECAVCLSD 126
Query: 138 FQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISSTTTT 182
+ +K R++P C H FH+DCID+W QS++ CPLCR ++ S T
Sbjct: 127 LVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDT 171
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 13/117 (11%)
Query: 72 IDILRRFSLSRNRRNLEHLIAHSPALETR----------GLDEAVIRAIPIFQFKKKASR 121
+ IL +F L+ +R + E + AL+ + G+D+++I +P+F +K
Sbjct: 60 LHILVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGL 119
Query: 122 DFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISS 178
S +C VCL EF+ +KLR++P C H FH++CID WL S++ CPLCR+++ S
Sbjct: 120 KI---SPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS 173
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 33 NSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIA 92
N T+FP + + +LA L F+ K ++R ++ +
Sbjct: 41 NRKTNFPTETVIAIIVLAIFISLSMVACFLHK---TFYRAEV----------EAASQEVF 87
Query: 93 HSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGH 152
HS A RGL++ ++ + PIF + + G + ECA+CL+EF + E LR +P C H
Sbjct: 88 HSRA--RRGLEKELVESFPIFLYSEVKGLKIG-KGGVECAICLSEFVDKETLRWMPPCSH 144
Query: 153 VFHIDCIDVWLQSNANCPLCRTSIS 177
FH +CIDVWL S + CP CR ++S
Sbjct: 145 TFHANCIDVWLSSQSTCPACRANLS 169
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 94 SPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHV 153
SP RGLD I++ P F + + + G EC VCLNEF+++E LR++P C HV
Sbjct: 49 SPRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGEL-ECVVCLNEFKDDETLRLVPPCVHV 107
Query: 154 FHIDCIDVWLQSNANCPLCRTSI 176
FH DC+D+WL ++ CP+CR +
Sbjct: 108 FHADCVDIWLSHSSTCPICRAKV 130
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 97 LETRGLDEAVIRAIPIFQFKKKASRDFGERSF-CECAVCLNEFQENEKLRIIPNCGHVFH 155
L G+D++ I +P+F +K G +++ +CAVCL EF+ +KLR++P C H FH
Sbjct: 103 LHDSGVDQSFIDTLPVFHYKSI----IGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFH 158
Query: 156 IDCIDVWLQSNANCPLCR 173
+DCID WL S++ CPLCR
Sbjct: 159 MDCIDTWLLSHSTCPLCR 176
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 43 IAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETRGL 102
+ I+ +L + I V +C W LRR + SRNR + H A +GL
Sbjct: 29 VLILAVLLCALTCIIGLIAVSRC--AW-----LRRIA-SRNRSDQTH--PPPVAAANKGL 78
Query: 103 DEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVW 162
+ V+R++P + + ECA+CL EF ++LR++P CGH FH+ CID W
Sbjct: 79 KKKVLRSLPKLTYSPDSP---PAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTW 135
Query: 163 LQSNANCPLCRTSISST 179
L S+++CP CR + T
Sbjct: 136 LGSHSSCPSCRQILVVT 152
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 100 RGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCI 159
+ LD+AV+ IPIF + K E+ EC+VCL+EF+E ++ R++P CGH FH+DCI
Sbjct: 79 QALDQAVLDKIPIFVYSSKNPPPPEEKE--ECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136
Query: 160 DVWLQSNANCPLCRTSI 176
D W +S + CPLCR +
Sbjct: 137 DTWFRSRSTCPLCRAPV 153
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 101 GLDEAVIRAIPIFQFKKKASRDFGERSF----CECAVCLNEFQENEKLRIIPNCGHVFHI 156
GLD+AVI + P F F K S + C++CL E++E E LR++P C H FH+
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 157 DCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRII 193
C+D WL+ N +CP+CR S T T+ P ++
Sbjct: 164 CCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVV 200
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 30/178 (16%)
Query: 19 RSPSNSIFGSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRF 78
RS +S+FG S+ + + AI IV +A F+L+ + + L W RID L++
Sbjct: 5 RSTHSSMFGDLSTEEVTSKIILTAI-IVLFMAVLFVLILH----LYAKLYWWRIDQLQQQ 59
Query: 79 S--------------------LSRNRRNLEHLIAHSPALETRGLDEAVIRAIPIFQFKKK 118
++R +R + AL GL + ++PI F++
Sbjct: 60 QQQQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQD 119
Query: 119 ASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
+ +D EC++CL+E + +K R++P C H FH++CID+W QS++ CP+CR ++
Sbjct: 120 SCKDG-----LECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 89 HLIAHSPALETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIP 148
H + HS RG+D+ VI + P F + + + G ECA+CL EF++ E LR +P
Sbjct: 81 HEVLHSRV--RRGIDKDVIESFPAFLYSEVKAFKIGNGGV-ECAICLCEFEDEEPLRWMP 137
Query: 149 NCGHVFHIDCIDVWLQSNANCPLCRTSIS 177
C H FH +CID WL S + CP+CR ++S
Sbjct: 138 PCSHTFHANCIDEWLSSRSTCPVCRANLS 166
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 98 ETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHID 157
E G+ V+R+IPI F K DF + EC VCL+E + +K R++P+C H FH++
Sbjct: 60 ERVGIKPYVLRSIPIVDFNTK---DF--KYVLECVVCLSELADGDKARVLPSCDHWFHVE 114
Query: 158 CIDVWLQSNANCPLCRTSI 176
CID WLQSN+ CP+CR +
Sbjct: 115 CIDSWLQSNSTCPICRKRV 133
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 97 LETRGLDEAVIRAIPIFQFKKKASRDFGER-SFCECAVCLNEFQENEKLRIIPNCGHVFH 155
L +D++ I A+P+ +K G R +CAVCL EF ++LR++P C H FH
Sbjct: 91 LHDAEIDQSFIDALPLLHYKTM----IGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFH 146
Query: 156 IDCIDVWLQSNANCPLCR 173
++CID WL +N+ CPLCR
Sbjct: 147 VECIDTWLLTNSTCPLCR 164
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 100 RGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCI 159
RGLD VI ++P F K + + ECAVCL+ +E + R++PNC HVFH+ C+
Sbjct: 74 RGLDSLVIASLPTFVVGIK-----NDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCV 128
Query: 160 DVWLQSNANCPLCRT 174
D WL + + CP+CRT
Sbjct: 129 DTWLTTQSTCPVCRT 143
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 38 FPVIAIAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRN-LEHLIAHSPA 96
FP +++ + +L TG LL + IF L + + R F+ +R LI +
Sbjct: 16 FPSVSMPVTVVL-TGVLL--FVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATP 72
Query: 97 LETRGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHI 156
E GLD +IR+ P+F + ++ G ECA+CL+EF + + +R+I C H FH
Sbjct: 73 PENTGLDPFIIRSFPVFHYSSATKKNHGT----ECAICLSEFSDEDTVRLITVCRHPFHS 128
Query: 157 DCIDVWLQSNANCPLCRTSI 176
+CID+W + + CP+CR +
Sbjct: 129 NCIDLWFELHKTCPVCRCEL 148
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 105 AVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQ 164
+V+ ++PIF+F R S +CAVCL++F+ ++LR++P C H FH DCID+WL
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNS-GDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 150
Query: 165 SNANCPLCRT 174
SN CPLCR+
Sbjct: 151 SNQTCPLCRS 160
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 23/116 (19%)
Query: 101 GLDEAVIRAIPIFQFKKKASRDF-------GERSFCECAVCLNEFQENEKLRIIPNCGHV 153
GLD +VI + P F F K + GE C++CL E+ E E LR++P C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHY 158
Query: 154 FHIDCIDVWLQSNANCPLCRTSISSTTTTPTTFLPFDRIIAPSSTPQDPSPYTENV 209
FH+ C+D WL+ N +CP+CR S PT P STPQ +P +E V
Sbjct: 159 FHVYCLDAWLKLNGSCPVCRNS-----PLPT----------PQSTPQS-TPLSEVV 198
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 36/177 (20%)
Query: 11 ASQALPPI-------RSPSNSIFGSRSSHNSDTSFPVIAIAIVGILATGFLLVSYYIFVI 63
A+QA P I R+ +S+ +++ + DT +I A++ L + S V+
Sbjct: 7 ATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCVL 66
Query: 64 KCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETRGLDEAVIRAIPIFQF----KKKA 119
+C RRF+ + + + +A +G+ + ++ IP+ + K KA
Sbjct: 67 RC---------TRRFTPNEDPVDTNANVA-------KGIKKRALKVIPVDSYSPELKMKA 110
Query: 120 SRDFGERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
+ EC +CL +F E E +R++P C H FH+ CID WL S+++CP CR S+
Sbjct: 111 T---------ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 32 HNSDTSFPVIAIAIV----GILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNL 87
HN+ +F V ++ + +L+S I I CCL H I R +L R+ R +
Sbjct: 34 HNTQRAFAVAPSPLITHENNLSGNVMMLLSILICGIICCLGLHYII---RCALRRSTRFM 90
Query: 88 EHLIAHSPALET------RGLDEAVIRAIPIFQFKKKASRDFGERSFCECAVCLNEFQEN 141
+ P+L + +G+ + +R P+ + + + + EC +CL++F
Sbjct: 91 --ISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDE---ECVICLSDFVSG 145
Query: 142 EKLRIIPNCGHVFHIDCIDVWLQSNANCPLCRTSISST 179
E+LR++P C H FH+ CID WLQ + CP CR + T
Sbjct: 146 EQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVET 183
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 43 IAIVGILATGFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRRNLEHLIAHSPALETRGL 102
+ I+ L + V+ V++C W LRRF+ + SP+ +GL
Sbjct: 29 VVILSALLCALICVAGLAAVVRC--AW-----LRRFTAGGD----------SPS-PNKGL 70
Query: 103 DEAVIRAIPIFQFKKKASRDFG---ERSFCECAVCLNEFQENEKLRIIPNCGHVFHIDCI 159
+ ++++P F S E ECA+CL +F + E++R++P CGH FH++CI
Sbjct: 71 KKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECI 130
Query: 160 DVWLQSNANCPLCR 173
D WL S ++CP CR
Sbjct: 131 DKWLVSRSSCPSCR 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,246,767
Number of Sequences: 539616
Number of extensions: 4845915
Number of successful extensions: 13252
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 12648
Number of HSP's gapped (non-prelim): 609
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)