BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042751
MGTSSRKLKAIFSSLAVTLLFMISHSQVAFSFDFEDVDEEEVYVLDRPVPDHSPRSRLLL
SSIRKGAQCSADHKNICNGVSANNGTSLLHCCKMHCRNILGDKNNCGKCGSKCKFGQLCC
NGTCTNVFDNEAHCGKCNKKCPRGVRCEFGNCGYA

High Scoring Gene Products

Symbol, full name Information P value
GRI
GRIM REAPER
protein from Arabidopsis thaliana 5.0e-28
AT4G26880 protein from Arabidopsis thaliana 1.0e-11
AT1G50650 protein from Arabidopsis thaliana 1.2e-10
AT5G55110 protein from Arabidopsis thaliana 1.2e-10
AT1G11925 protein from Arabidopsis thaliana 2.0e-10
AT1G50720 protein from Arabidopsis thaliana 6.6e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042751
        (155 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037037 - symbol:GRI "GRIM REAPER" species:370...   313  5.0e-28   1
TAIR|locus:2116407 - symbol:AT4G26880 "AT4G26880" species...   159  1.0e-11   1
TAIR|locus:2008006 - symbol:AT1G50650 "AT1G50650" species...   149  1.2e-10   1
TAIR|locus:2161605 - symbol:AT5G55110 "AT5G55110" species...   149  1.2e-10   1
TAIR|locus:504956323 - symbol:AT1G11925 "AT1G11925" speci...   147  2.0e-10   1
TAIR|locus:2015863 - symbol:AT1G50720 "AT1G50720" species...   142  6.6e-10   1


>TAIR|locus:2037037 [details] [associations]
            symbol:GRI "GRIM REAPER" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0005615 "extracellular space" evidence=IDA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=IMP]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=IMP] [GO:0010193 "response to ozone" evidence=IMP]
            [GO:0010942 "positive regulation of cell death" evidence=IMP]
            [GO:0042742 "defense response to bacterium" evidence=IMP]
            [GO:0048316 "seed development" evidence=IMP] [GO:0080141
            "regulation of jasmonic acid biosynthetic process" evidence=IMP]
            [GO:0080142 "regulation of salicylic acid biosynthetic process"
            evidence=IMP] EMBL:CP002684 GO:GO:0005615 GO:GO:0042742
            GO:GO:0010193 GO:GO:0048316 GO:GO:0010942 EMBL:AC022520
            GO:GO:0009867 GO:GO:0009863 GO:GO:0080141 GO:GO:0080142
            InterPro:IPR006969 Pfam:PF04885 UniGene:At.16238 UniGene:At.66953
            EMBL:AK176040 IPI:IPI00525247 PIR:H96571 RefSeq:NP_175721.1
            STRING:Q9LNN7 PRIDE:Q9LNN7 EnsemblPlants:AT1G53130.1 GeneID:841747
            KEGG:ath:AT1G53130 TAIR:At1g53130 HOGENOM:HOG000153056
            InParanoid:Q9LNN7 OMA:NCGRCGH PhylomeDB:Q9LNN7
            ProtClustDB:CLSN2914308 Genevestigator:Q9LNN7 Uniprot:Q9LNN7
        Length = 168

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 53/91 (58%), Positives = 60/91 (65%)

Query:    65 KGAQCSADHKNICNGVSANNGTSLLHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTC 124
             KG +C  +  NICNGV AN GTSLLHCCK HCRN+LGD+NN           Q CC G C
Sbjct:    78 KGMRCHVESYNICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVC 137

Query:   125 TNVFDNEAHCGKCNKKCPRGVRCEFGNCGYA 155
             T V  N  HCGKC +KC  GV+CE+G CGYA
Sbjct:   138 TYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168


>TAIR|locus:2116407 [details] [associations]
            symbol:AT4G26880 "AT4G26880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161566 EMBL:AL035440
            InterPro:IPR006969 Pfam:PF04885 HOGENOM:HOG000237715
            ProtClustDB:CLSN2686054 IPI:IPI00542746 PIR:T04811
            RefSeq:NP_194418.1 UniGene:At.65424 STRING:Q9SZ28
            EnsemblPlants:AT4G26880.1 GeneID:828795 KEGG:ath:AT4G26880
            TAIR:At4g26880 eggNOG:NOG277916 InParanoid:Q9SZ28 OMA:TIREYTS
            PhylomeDB:Q9SZ28 ArrayExpress:Q9SZ28 Genevestigator:Q9SZ28
            Uniprot:Q9SZ28
        Length = 152

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 31/90 (34%), Positives = 39/90 (43%)

Query:    70 SADHKN----ICNGVSANNGTSLLHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTCT 125
             +ADH N    IC         S + CC   C ++  D NN           Q CC G C 
Sbjct:    63 AADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCV 122

Query:   126 NVFDNEAHCGKCNKKCPRGVRCEFGNCGYA 155
              V  ++ HCG+CN  C  G  C +G C YA
Sbjct:   123 YVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152


>TAIR|locus:2008006 [details] [associations]
            symbol:AT1G50650 "AT1G50650" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC079279 InterPro:IPR006969
            Pfam:PF04885 IPI:IPI00545061 PIR:B96543 RefSeq:NP_175480.1
            UniGene:At.65999 STRING:Q9C6P6 EnsemblPlants:AT1G50650.1
            GeneID:841487 KEGG:ath:AT1G50650 TAIR:At1g50650 eggNOG:NOG118106
            HOGENOM:HOG000152179 InParanoid:Q9C6P6 OMA:RMRCCRN PhylomeDB:Q9C6P6
            ProtClustDB:CLSN2682908 ArrayExpress:Q9C6P6 Genevestigator:Q9C6P6
            Uniprot:Q9C6P6
        Length = 174

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 23/67 (34%), Positives = 35/67 (52%)

Query:    89 LHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTCTNVFDNEAHCGKCNKKCPRGVRCE 148
             + CC+  C ++L D N+             CC+G C +   + ++CG+C  +C  G  CE
Sbjct:    72 MRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCE 131

Query:   149 FGNCGYA 155
             FG CGYA
Sbjct:   132 FGMCGYA 138


>TAIR|locus:2161605 [details] [associations]
            symbol:AT5G55110 "AT5G55110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB010071 InterPro:IPR006969
            Pfam:PF04885 HOGENOM:HOG000237715 ProtClustDB:CLSN2686054
            IPI:IPI00537676 RefSeq:NP_200322.1 UniGene:At.55560 STRING:Q9FLQ0
            PRIDE:Q9FLQ0 EnsemblPlants:AT5G55110.1 GeneID:835602
            KEGG:ath:AT5G55110 TAIR:At5g55110 eggNOG:NOG290349
            InParanoid:Q9FLQ0 OMA:ANATMAC PhylomeDB:Q9FLQ0
            Genevestigator:Q9FLQ0 Uniprot:Q9FLQ0
        Length = 163

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/88 (31%), Positives = 42/88 (47%)

Query:    69 CSADHKNICNGVSANNGTSL-LHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTCTNV 127
             C+ D++ IC+    + G +  + CC   C ++  D  N           Q CC G C  V
Sbjct:    77 CNKDNE-ICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYV 135

Query:   128 FDNEAHCGKCNKKCPRGVRCEFGNCGYA 155
               ++ HCG+CN +C  G  C +G C YA
Sbjct:   136 AYDKRHCGECNHRCDLGEFCVYGLCNYA 163


>TAIR|locus:504956323 [details] [associations]
            symbol:AT1G11925 "AT1G11925" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC002131
            EMBL:DQ912187 IPI:IPI00543839 PIR:A86254 RefSeq:NP_683300.2
            UniGene:At.65902 STRING:O65387 EnsemblPlants:AT1G11925.1
            GeneID:837743 KEGG:ath:AT1G11925 TAIR:At1g11925 OMA:KGRSCAY
            PhylomeDB:O65387 ProtClustDB:CLSN2920586 Genevestigator:O65387
            InterPro:IPR006969 Pfam:PF04885 Uniprot:O65387
        Length = 140

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 29/91 (31%), Positives = 44/91 (48%)

Query:    66 GAQCSADHKN-ICNGVSANNGTSLLHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTC 124
             GA  + D  + +C  +  + G +   CC+  C ++  +K N           ++CCNG C
Sbjct:    54 GATLTCDKSSKVCR-LKGSPGRN---CCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYC 109

Query:   125 TNVFDNEAHCGKCNKKCPRGVRCEFGNCGYA 155
              N   +  HCG C KKC +G  C +G C YA
Sbjct:   110 VNPMFDRRHCGGCFKKCKKGRSCAYGMCSYA 140


>TAIR|locus:2015863 [details] [associations]
            symbol:AT1G50720 "AT1G50720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR006969
            Pfam:PF04885 EMBL:AC079027 EMBL:DQ056490 IPI:IPI00541294 PIR:A96544
            RefSeq:NP_175487.1 UniGene:At.62376 STRING:Q9C6T5
            EnsemblPlants:AT1G50720.1 GeneID:841494 KEGG:ath:AT1G50720
            TAIR:At1g50720 HOGENOM:HOG000237715 InParanoid:Q9C6T5 OMA:MAKATIL
            PhylomeDB:Q9C6T5 ProtClustDB:CLSN2686054 ArrayExpress:Q9C6T5
            Genevestigator:Q9C6T5 Uniprot:Q9C6T5
        Length = 154

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/90 (33%), Positives = 40/90 (44%)

Query:    70 SADHKN----ICNGVSANNGTSLLHCCKMHCRNILGDKNNXXXXXXXXXXXQLCCNGTCT 125
             +ADH N    IC      N T  + CC   C ++  D +N           Q CC G C 
Sbjct:    67 AADHCNKEEEICKSQGMYNST--MACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECV 124

Query:   126 NVFDNEAHCGKCNKKCPRGVRCEFGNCGYA 155
              +  ++ HCG+CN  C  G  C +G C YA
Sbjct:   125 YLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.134   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      155       115   0.00091  102 3  11 22  0.44    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  136 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Total cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Start:  Fri May 10 22:30:59 2013   End:  Fri May 10 22:31:00 2013

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