BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042754
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5I0K7|ALG13_RAT UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus
norvegicus GN=Alg13 PE=1 SV=1
Length = 165
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
+KR FVTVGTT FD LV V + Q L GY HL++Q+GRGT VP E
Sbjct: 1 MKR-AFVTVGTTSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FT 57
Query: 70 VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
+D + + S+ + L+ A LVISHAG+GS E+L GKPL+VVVNE LM+NHQ ELA++L
Sbjct: 58 LDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117
Query: 130 ARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGF 175
HL+ L ++ MDL +L Y PG + +++ +G
Sbjct: 118 KEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVGL 163
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Query: 12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
+ VFVTVGTT FD L+ V + Q++ GY L++Q+GRGT VP E +D
Sbjct: 2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLD 59
Query: 72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
+ + S+ + ++ A LVISHAG+GS ETL GKPL+VV+NE LM+NHQ ELA++L
Sbjct: 60 VYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKE 119
Query: 132 KHL-YC 136
HL YC
Sbjct: 120 GHLFYC 125
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
+KR FVTVGTT FD LV V + Q L GY HL++Q+GRGT VP E
Sbjct: 1 MKR-AFVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FT 57
Query: 70 VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
+D + + S+ + L+ A LVISHAG+GS E+L GKPL+VVVNE LM+NHQ ELA++L
Sbjct: 58 LDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117
Query: 130 ARKHL-YC 136
HL YC
Sbjct: 118 KEGHLFYC 125
>sp|O14190|ALG13_SCHPO UDP-N-acetylglucosamine transferase subunit alg13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=alg13 PE=3 SV=1
Length = 162
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 15 FVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--TYVPTKSLGEDGLMAVDY 72
FVTVG+T FD L++AV E + L + G L++Q G+G + KS+ ++ DY
Sbjct: 4 FVTVGSTQFDDLIRAVLKPEFQHCLVKHGINQLIVQYGKGKQAFGDPKSVAGLTILGFDY 63
Query: 73 FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARK 132
+ I ++ AS+VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +LA+
Sbjct: 64 ---APEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMN 120
Query: 133 HLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLIN 170
+L +L + + + + L P+ D + K++
Sbjct: 121 YLVTCSTSNLVEGLEELYPKILTPFPKSDCSTFQKVMQ 158
>sp|Q6C3P1|ALG13_YARLI UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=ALG13 PE=3 SV=1
Length = 196
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 13 IVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGT-YVPTKSLGEDGLMAV 70
+V VT G T F+AL++ V + E L++ G++ + +Q GRG ++ TK ++G+M++
Sbjct: 29 LVLVTTGGTVPFEALIELVLSHESITTLSQLGFSKMRVQYGRGNRHIFTKH-HKEGVMSI 87
Query: 71 DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
F ++ +A + A LVISHAG+GS+ + LR GK +VVVN LMDNHQ E+AEEL
Sbjct: 88 TGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIEIAEELFR 147
Query: 131 RKHLYCA 137
++HL +
Sbjct: 148 KRHLLVS 154
>sp|Q4WQN1|ALG13_ASPFU UDP-N-acetylglucosamine transferase subunit alg13 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=alg13 PE=3 SV=2
Length = 197
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 12 RIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV------------- 57
++ FVTVG T F+ LV+A L GY+HLL+Q G+ +
Sbjct: 5 KVCFVTVGATASFEELVRAALDPSFVTALEENGYSHLLVQYGKNAVIYENFLKQYPPERR 64
Query: 58 PTKSLGEDGLMAVDY-----FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVV 112
P + + G ++ F + + RS LVISHAGSG+I E LR G PLIVV
Sbjct: 65 PWRRINISGFSFHEHGLGGDFALAQADISKGRSGGLVISHAGSGTILEVLRMGIPLIVVP 124
Query: 113 NEDLMDNHQSELAEELAARKHLYCAHPQSLHQVI 146
N L DNHQ ELA +L + ++ +H Q+L Q +
Sbjct: 125 NPSLQDNHQEELARQLQKQGYVVASHYQNLCQAL 158
>sp|P53178|ALG13_YEAST UDP-N-acetylglucosamine transferase subunit ALG13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ALG13 PE=1
SV=1
Length = 202
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 11 KRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--------------- 54
++ +FVT G T F LV V + E QEL + G+ L+IQ GR
Sbjct: 6 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQ 65
Query: 55 ---TYVPTKSLG----------EDGLMAVDYFTFSSSIADHLRSAS-LVISHAGSGSIFE 100
+P G +G + V F FS+ + +R S LVISHAG+GSI +
Sbjct: 66 RESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILD 125
Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM---DLESLLPY 157
+LR KPLIV VN+ LMDNHQ ++A++ +++ P +IAG+ E L P+
Sbjct: 126 SLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETG-LIAGLRASQTEKLKPF 184
>sp|Q750J3|ALG13_ASHGO UDP-N-acetylglucosamine transferase subunit ALG13 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=ALG13 PE=3 SV=1
Length = 203
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 4 TRDSVSLKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG-------- 54
T+ + + V VT G T F LV AV V EL + G++ +++Q GRG
Sbjct: 5 TKSKMEGPKTVVVTCGATVPFPGLVNAVLDRRVLAELAQCGFSRVMVQYGRGFAAEFERQ 64
Query: 55 ---TYVPTKSLGEDGLMAVDY------------FTFSSSIADHL-RSASLVISHAGSGSI 98
+ +GL D F F + + + SA+LV+SHAG+GSI
Sbjct: 65 VGAAGAVRAACDAEGLEGCDAHAWRWQGLEIIGFAFHAQMESLIGTSAALVVSHAGTGSI 124
Query: 99 FETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMDLESLLP 156
+ LR KPLIV VNE L+DNHQ ++A A HL+ A L +A E+L P
Sbjct: 125 LDALRQQKPLIVCVNEALLDNHQEQIARRFEALGHLWAIRADVDELAGALARSTRETLAP 184
Query: 157 YQPGDATPVAKLIN 170
P A+L+
Sbjct: 185 LPPAYKQGFAELLQ 198
>sp|Q6FVR6|ALG13_CANGA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=ALG13 PE=3 SV=1
Length = 198
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 88/176 (50%), Gaps = 34/176 (19%)
Query: 15 FVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG------------TYVPTKS 61
FVT G T F ALV+AV E L+R GY L +Q GRG T +P +S
Sbjct: 4 FVTCGATVPFPALVEAVLAPEFVGCLSREGYRVLCVQFGRGYDFEAQFTSVTCTRMPLES 63
Query: 62 ---------LGEDGLMAVDY---------FTFSSSIADHL-RSASLVISHAGSGSIFETL 102
+ ++ + + Y F +S++I + R +VISHAG+GSI ++L
Sbjct: 64 AEVSELRQLVRDERVTVMGYKVQDVVVLGFAYSNNILQIIDRYGDVVISHAGTGSILDSL 123
Query: 103 RHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDL--ESLLP 156
R K LIVVVN LMDNHQ ++AE+ H+ +P ++ A L E L+P
Sbjct: 124 RLNKKLIVVVNHTLMDNHQKQIAEKFQNLGHILATNPTAIELCDAMKRLKHEDLIP 179
>sp|Q6CXY0|ALG13_KLULA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=ALG13 PE=3 SV=1
Length = 197
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Query: 10 LKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG-------------- 54
+ V VT G T F LV+ V V ++L GY ++IQ GRG
Sbjct: 1 MNNTVLVTCGATVSFPRLVETVLDRSVTEKLKVLGYGRIVIQYGRGFSDTFLQLVEKHLG 60
Query: 55 TYVPTKSLGEDGLMAVDY-------------FTFSSSIADHL-RSASLVISHAGSGSIFE 100
+ KS G L ++ F FS I + + LVISHAG+GSI +
Sbjct: 61 LFTEKKSCGIKVLDKIENLKVISVDGIEICGFEFSHDIEKLIANNIDLVISHAGTGSILD 120
Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQS 141
+LR GK LIVVVN+ LMDNHQ +A++ +K L+ H +
Sbjct: 121 SLRVGKKLIVVVNDTLMDNHQQLIADKFEQQKLLWSVHANT 161
>sp|Q5ABE5|ALG13_CANAL UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=ALG13 PE=3
SV=1
Length = 293
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 37/181 (20%)
Query: 7 SVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMG---RGTYVPTKSLG 63
++ +K I+ T T F++L++ + + + L R L+IQ G + + ++S
Sbjct: 71 NIIMKSILITTGATITFESLIQIIVSPQFLNNLIRLKINKLIIQYGHEIKNSINLSESFF 130
Query: 64 EDGLMAVDY----------------------------------FTFSSSIADHLRSASLV 89
+ + D F++SS+I ++ + L+
Sbjct: 131 NETINKYDLINLFNLEIEETPIGDDDDDEGIRLFKNSDIEILAFSYSSNINKYIENVDLI 190
Query: 90 ISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM 149
ISHAG+GSI + L KPLIV+VN+ LMDNHQ E+A++ + + L Q +
Sbjct: 191 ISHAGTGSIIDCLHLNKPLIVIVNDKLMDNHQLEIAQQFTKLNYCIYYSIKELEQYVNNN 250
Query: 150 D 150
D
Sbjct: 251 D 251
>sp|Q6BST1|ALG13_DEBHA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=ALG13 PE=3 SV=2
Length = 212
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 73 FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARK 132
F FS+ I + + +VISHAG+GSI +TLR KPLIVV N+ LM+ HQ E+A+EL
Sbjct: 103 FPFSNDIGSFISESDVVISHAGTGSIIDTLRLEKPLIVVTNDKLMNKHQEEVADELVK-- 160
Query: 133 HLYCAHPQSLH 143
L C ++
Sbjct: 161 -LGCCRKMTIE 170
>sp|P0CN88|ALG13_CRYNJ UDP-N-acetylglucosamine transferase subunit ALG13 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=ALG13 PE=3 SV=1
Length = 200
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 14 VFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE--------D 65
+ VTVG+T F +L V L G L++Q GR + + D
Sbjct: 7 LLVTVGSTLFPSLTSHVLLPTFLSLLQSLGVQRLVVQYGRAELKLQDDVKQTLNIDSQGD 66
Query: 66 GL------------------MAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKP 107
G+ M V+ F++ + + VISHAGSGSI LR P
Sbjct: 67 GIGVWSDNDGDRVRDEKQNGMVVEVMRFTNDFEGLVGKSDAVISHAGSGSILTVLRRAPP 126
Query: 108 --LIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVI 146
L+VV N LMD+HQSELA+ L ++ A + L + +
Sbjct: 127 IPLLVVPNRSLMDDHQSELADALYKDGYVMVASVEDLEEKV 167
>sp|P0CN89|ALG13_CRYNB UDP-N-acetylglucosamine transferase subunit ALG13 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=ALG13 PE=3 SV=1
Length = 200
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 14 VFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE--------D 65
+ VTVG+T F +L V L G L++Q GR + + D
Sbjct: 7 LLVTVGSTLFPSLTSHVLLPTFLSLLQSLGVQRLVVQYGRAELKLQDDVKQTLNIDSQGD 66
Query: 66 GL------------------MAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKP 107
G+ M V+ F++ + + VISHAGSGSI LR P
Sbjct: 67 GIGVWSDNDGDRVRDEKQNGMVVEVMRFTNDFEGLVGKSDAVISHAGSGSILTVLRRAPP 126
Query: 108 --LIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVI 146
L+VV N LMD+HQSELA+ L ++ A + L + +
Sbjct: 127 IPLLVVPNRSLMDDHQSELADALYKDGYVMVASVEDLEEKV 167
>sp|Q39YL9|MURG_GEOMG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=murG PE=3 SV=1
Length = 364
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G S E+ +A D F S+AD R A LV+ AG+ +I E GKP I
Sbjct: 222 QTGENDLEDVTSAYEEQGVAADVVAFIDSMADAYRWADLVVCRAGATTIAEITACGKPCI 281
Query: 110 VVVNEDLMDNHQSELAEELAARKHLYCAHPQSL 142
+ +D+HQ AE L R + Q L
Sbjct: 282 FIPYPHAVDDHQRRNAEALLKRGAGFVIIEQEL 314
>sp|Q748D6|MURG_GEOSL UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=murG PE=3 SV=1
Length = 364
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 59 TKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMD 118
T + E G A D F S+AD R A L++ AG+ ++ E GKP I + +D
Sbjct: 232 TAAYEEQGFTA-DVVAFIDSMADAYRWADLIVCRAGATTLAEVTACGKPCIFIPYPHAVD 290
Query: 119 NHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLL 155
+HQ AE L R + Q L + + L+
Sbjct: 291 DHQRRNAESLLKRGAGFVIIEQELSGEVLAQAIRDLM 327
>sp|Q7V388|MURG_PROMP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=murG PE=3 SV=1
Length = 364
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
F++ IA +++ LVIS +G+G+I E ++ GKP I++ + +NHQ + A L++
Sbjct: 240 FTNQIASLMQNCELVISRSGAGTINELIQTGKPSILIPYPNSKNNHQEKNAMILSS 295
>sp|A7H2Z9|MURG_CAMJD UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=murG PE=3
SV=1
Length = 342
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G+ + K + + D F FSS++ + +++A L IS AG+ ++FE + P I
Sbjct: 204 QCGKNDFEKCKKHYQSLNIQADVFDFSSNLGEKMKNADLAISRAGASTLFELCANTLPAI 263
Query: 110 VVVNEDLMDNHQ 121
+ NHQ
Sbjct: 264 FIPYPYATKNHQ 275
>sp|B1ZU31|MURG_OPITP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=murG PE=3 SV=1
Length = 377
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 70 VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQ 121
+ + TF + + L +A LV+S AG+G+I E +R P I+V D+HQ
Sbjct: 244 IQFLTFCDCVPELLSAADLVLSRAGAGTIAELVRCETPAILVPFPQAADDHQ 295
>sp|B4RFS0|MURG_PHEZH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Phenylobacterium zucineum (strain HLK1)
GN=murG PE=3 SV=1
Length = 365
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 64 EDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSE 123
D L+ + F IA LR A LV+ AG+G++ E GKP I+V +D+ Q +
Sbjct: 238 RDALVDAEIAPFFRDIAGRLREAHLVVGRAGAGTVCEFAIAGKPSILVPLAIALDDDQGQ 297
Query: 124 LAEELA 129
A LA
Sbjct: 298 NARLLA 303
>sp|Q58652|Y1255_METJA Uncharacterized glycosyltransferase MJ1255 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1255 PE=3 SV=2
Length = 394
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 45 THLLIQMGRGTYVPTKSLGEDGLMA------VDYFTFSSSIADHLRSASLVISHAGSGSI 98
+L +++ G+Y K L D + V+ ++++ + +++A L++SH G +I
Sbjct: 221 NNLNVKLVCGSYEVAKKLMRDLNLNSYKNENVEIIPITTNMKELIKNAELIVSHGGHSTI 280
Query: 99 FETLRHGKPLIVV 111
E L GKPLIV+
Sbjct: 281 MEALSFGKPLIVI 293
>sp|Q9RNM6|MURG_ZYMMO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=murG PE=3 SV=2
Length = 387
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 68 MAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEE 127
+ D T+ + + L + LVIS AG+ +I E G+P I++ MDNHQ A E
Sbjct: 243 IPADISTYMADLPQRLGWSHLVISRAGASTIAELGVAGRPAILIPYPAAMDNHQYANARE 302
Query: 128 L 128
L
Sbjct: 303 L 303
>sp|A2BUH4|MURG_PROM5 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9515)
GN=murG PE=3 SV=1
Length = 364
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
F++ IA +++ LVIS +G+G+I E ++ KP I+V + +NHQ + A L++
Sbjct: 240 FTNQIASLMQNCDLVISRSGAGTINELIQTKKPSILVPYPNSKNNHQEKNAIILSS 295
>sp|Q1CSB1|MURG_HELPH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain HPAG1)
GN=murG PE=3 SV=1
Length = 353
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 38 ELTRRGY--THLLIQMGRGTYVPTKSLGED-GLM-AVDYFTFSSSIADHLRSASLVISHA 93
+LT++G TH+ G +Y + ++ GL+ ++ F F ++I + + A L +S A
Sbjct: 199 KLTKQGIKITHI---CGPNSYEQVRFFYQELGLLDKIELFAFHNNITEVMHRADLCVSRA 255
Query: 94 GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-----PQSLHQVIAG 148
G+ S++E +G P I + +NHQ E Y A P+ L +VI
Sbjct: 256 GASSVWELCANGLPTIFIPYPFASNNHQYYNVLEFEKENLCYVAPQNELLPKKLFEVIRK 315
Query: 149 MD 150
++
Sbjct: 316 LN 317
>sp|Q4ULT6|MURG_RICFE UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=murG PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 71 DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
++ F ++A + A LVIS AG+ +I E G P I + DNHQ A+ LA
Sbjct: 244 EFAEFFDNMALKYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAKLLAD 303
Query: 131 RKHLYCAHPQSL 142
+K +C S+
Sbjct: 304 KKAGWCLEQNSI 315
>sp|Q31CY4|MURG_PROM9 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9312)
GN=murG PE=3 SV=1
Length = 363
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
F++ IA +++ LVIS +G+G+I E + KP I++ D +NHQ + A LA
Sbjct: 239 FTNEIAALIQNCDLVISRSGAGTINELIEAEKPSILIPYPDSKNNHQEKNALILA 293
>sp|B6JMZ5|MURG_HELP2 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain P12) GN=murG
PE=3 SV=1
Length = 353
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 64 EDGLM-AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQS 122
E GL+ ++ F F ++I + +R A L +S AG+ S++E +G P I + +NHQ
Sbjct: 225 ELGLLDKIELFAFHNNIIEVMRRADLCVSRAGASSVWELCANGLPTIFIPYPFASNNHQY 284
Query: 123 ELAEELAARKHLYCAH-----PQSLHQVIAGMD 150
E Y P+ L +VI ++
Sbjct: 285 YNVLEFEKENLCYVVPQNELLPKKLFEVIRKLN 317
>sp|Q11RH5|MURG_CYTH3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469) GN=murG PE=3 SV=1
Length = 369
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 32 TLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS---ASL 88
++E E + +L Q G+ Y K + + D+ IAD R+ A +
Sbjct: 212 SIERNLEQLKNAGIQVLWQTGKFYYEGLKQYNSETIKVTDF------IADMNRAYAMADV 265
Query: 89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH----PQSLHQ 144
++S AG+ SI E GKP I+V + ++ ++HQ++ A L+ ++ + P+ L Q
Sbjct: 266 IVSRAGALSISELSIVGKPCILVPSPNVAEDHQTKNALALSEKQAAWMVKDMNAPEELVQ 325
>sp|A6Q722|MURG_SULNB UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Sulfurovum sp. (strain NBC37-1) GN=murG
PE=3 SV=1
Length = 338
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 28 KAVD--TLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS 85
KA++ LE+ +L RG ++ Q G + ED + + F F++ +AD+++
Sbjct: 181 KAINKLALEIAPKLKERG-IRIIHQAGEKNIDEVRKDYEDIGIEAEVFGFTTKLADYMKE 239
Query: 86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSL--H 143
A L I+ AG+ +++E P + + + +HQ A+ L + + +
Sbjct: 240 ADLAIARAGASTLWELSATALPTLFIPYPYAVSDHQYYNAQFLVEKDLAWIMREGEIDTQ 299
Query: 144 QVIA--GMDLES 153
+V+A G DLE+
Sbjct: 300 KVLALLGEDLET 311
>sp|Q68WW7|MURG_RICTY UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=murG PE=3 SV=1
Length = 385
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 71 DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
++ F +IA + A+LVIS AG+ +I E G P I + DNHQ A+ LA
Sbjct: 267 EFAEFFDNIALQYKVANLVISRAGASTIEELTYIGLPTIFIPLPSAADNHQYYNAKLLAD 326
Query: 131 RKHLYCAHPQSL 142
K +C ++
Sbjct: 327 NKAGWCLEQNNI 338
>sp|Q5HU62|MURG_CAMJR UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Campylobacter jejuni (strain RM1221)
GN=murG PE=3 SV=1
Length = 342
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G+ + K + + D F FS ++ + +++A L IS AG+ ++FE + P I
Sbjct: 204 QCGKNDFEKCKKHYQSLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPAI 263
Query: 110 VVVNEDLMDNHQ 121
+ NHQ
Sbjct: 264 FIPYPYAAKNHQ 275
>sp|A3PAR5|MURG_PROM0 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9301)
GN=murG PE=3 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
F++ IA +++ LVIS +G+G+I E + KP I++ + +NHQ + A LA
Sbjct: 239 FTNEIAALIQNCDLVISRSGAGTINELIESEKPSILIPYPNSKNNHQEKNAMILA 293
>sp|A1W027|MURG_CAMJJ UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=murG PE=3 SV=1
Length = 342
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G+ + K + + D F FS ++ + +++A L IS AG+ ++FE + P I
Sbjct: 204 QCGKNDFEKCKKHYQSLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTI 263
Query: 110 VVVNEDLMDNHQ 121
+ NHQ
Sbjct: 264 FIPYPYAAKNHQ 275
>sp|Q9PNQ2|MURG_CAMJE UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=murG PE=3 SV=1
Length = 342
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G+ + K + + D F FS ++ + +++A L IS AG+ ++FE + P I
Sbjct: 204 QCGKNDFEKCKKHYQSLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTI 263
Query: 110 VVVNEDLMDNHQ 121
+ NHQ
Sbjct: 264 FIPYPYAAKNHQ 275
>sp|A8FM88|MURG_CAMJ8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=murG PE=3
SV=1
Length = 342
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 50 QMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLI 109
Q G+ + K + + D F FS ++ + +++A L IS AG+ ++FE + P I
Sbjct: 204 QCGKNDFEKCKKHYQSLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTI 263
Query: 110 VVVNEDLMDNHQ 121
+ NHQ
Sbjct: 264 FIPYPYAAKNHQ 275
>sp|A6LLF1|MURG_THEM4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=murG PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 64 EDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSE 123
E+ L A+DY ++AD+ +S + I+ G+ ++ E L P IV+ E ++HQ E
Sbjct: 220 EENLRAIDYI---ENMADYYQSVNCAITRGGATTVSELLYFQVPSIVIPWEGATESHQIE 276
Query: 124 LAEEL 128
A+E+
Sbjct: 277 NAKEI 281
>sp|Q0BXU2|MURG_HYPNA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=murG PE=3 SV=1
Length = 366
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 74 TFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
F + + L +A LVI+ +G+G++ E G+P I++ MD+HQ+ AE L A
Sbjct: 250 AFFGDMPERLAAAHLVIARSGAGTVSELATVGRPSILIPLAIAMDDHQAANAEALTA 306
>sp|A8G2K3|MURG_PROM2 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9215)
GN=murG PE=3 SV=1
Length = 362
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
F++ +A +++ LVIS +G+G+I E + KP I++ D +NHQ + A +A
Sbjct: 239 FTNEVAALIQNCDLVISRSGAGTINELIEAEKPSILIPYPDSKNNHQEKNAMIIA 293
>sp|A6L071|MURG_BACV8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=murG PE=3 SV=1
Length = 376
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELA 125
F S +A +A L+IS AG+GSI E KP+I+V + ++ ++HQ++ A
Sbjct: 255 FISDMAAAYSAADLIISRAGAGSISEFCLLQKPVILVPSPNVAEDHQTKNA 305
>sp|A2BNZ2|MURG_PROMS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain AS9601)
GN=murG PE=3 SV=1
Length = 363
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
F++ IA +++ LVIS +G+G+I E + KP I++ +NHQ + A LAA
Sbjct: 239 FTNEIAALIQNCDLVISRSGAGTINELMEAEKPSILIPYPYSKNNHQEKNAMILAA 294
>sp|O25770|MURG_HELPY UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=murG PE=3 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 38 ELTRRGY--THLLIQMGRGTYVPTKSLGED-GLM-AVDYFTFSSSIADHLRSASLVISHA 93
+LT++G TH+ G +Y + ++ GL+ ++ F F ++I + + A L +S A
Sbjct: 199 KLTKQGIKITHI---CGPNSYEQVRFFYQELGLLDKIELFAFHNNITEIMHRADLCVSRA 255
Query: 94 GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-----PQSLHQVIAG 148
G+ S++E +G P I + +NHQ E Y P+ L +VI
Sbjct: 256 GASSVWELCANGLPTIFIPYPFASNNHQYYNVLEFEKENLCYVVPQNELLPKKLFEVIRK 315
Query: 149 MD 150
++
Sbjct: 316 LN 317
>sp|Q9ZK59|MURG_HELPJ UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain J99) GN=murG
PE=3 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 38 ELTRRGY--THLLIQMGRGTYVPTKSLGED-GLM-AVDYFTFSSSIADHLRSASLVISHA 93
+LT++G TH+ G +Y + ++ GL+ ++ F F ++I + + A L +S A
Sbjct: 199 KLTKQGIKITHI---CGPNSYEQVRFFYQELGLLDKIELFAFHNNITEVMHRADLCVSRA 255
Query: 94 GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-----PQSLHQVIAG 148
G+ S++E +G P I + +NHQ E Y P+ L +VI
Sbjct: 256 GASSVWELCANGLPTIFIPYPFASNNHQYYNVLEFEKENLCYVVPQNELLPKKLFEVIRK 315
Query: 149 MD 150
++
Sbjct: 316 LN 317
>sp|Q2RVU4|MURG_RHORT UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rhodospirillum rubrum (strain ATCC 11170
/ NCIB 8255) GN=murG PE=3 SV=1
Length = 387
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 49 IQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPL 108
I+ R TY ++ G D L++ F S + + LR A LVI +G+ ++ E G+P
Sbjct: 241 IEAVRATY---EAQGIDALLS----AFFSDLPERLRDAHLVICRSGASTVGELAALGRPA 293
Query: 109 IVVVNEDLMDNHQSELAEEL 128
I+V +D+HQ+ A L
Sbjct: 294 ILVPFPHAIDDHQTANARGL 313
>sp|B2UUR4|MURG_HELPS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain Shi470)
GN=murG PE=3 SV=1
Length = 353
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 64 EDGLM-AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQS 122
E GL+ V+ F F ++I + + A L +S AG+ S++E +G P I + +NHQ
Sbjct: 225 ELGLLDKVELFAFHNNITEVMHRADLCVSRAGASSVWELCANGLPTIFIPYPFASNNHQY 284
Query: 123 ELAEELAARKHLYCAH-----PQSLHQVIAGMD 150
E Y P+ L +VI ++
Sbjct: 285 YNVLEFEKENLCYVVPQNELLPKKLFEVIRKLN 317
>sp|A8GRZ6|MURG_RICRS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=murG PE=3 SV=1
Length = 376
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL 134
F ++A + A LVIS AG+ +I E G P I + DNHQ A+ LA K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLADEKTG 323
Query: 135 YCAHPQSL 142
+C ++
Sbjct: 324 WCLEQNNI 331
>sp|B0BXF6|MURG_RICRO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia rickettsii (strain Iowa)
GN=murG PE=3 SV=1
Length = 376
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL 134
F ++A + A LVIS AG+ +I E G P I + DNHQ A+ LA K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLADEKTG 323
Query: 135 YCAHPQSL 142
+C ++
Sbjct: 324 WCLEQNNI 331
>sp|B5Z8F1|MURG_HELPG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain G27) GN=murG
PE=3 SV=1
Length = 353
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 64 EDGLM-AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQS 122
E GL+ V+ F F ++I + + A L +S AG+ S++E +G P I + +NHQ
Sbjct: 225 ELGLLDKVELFAFHNNIIEVMHRADLCVSRAGASSVWELCANGLPTIFIPYPFASNNHQY 284
Query: 123 ELAEELAARKHLYCAH-----PQSLHQVIAGMD 150
E Y P+ L +VI ++
Sbjct: 285 YNVLEFEKENLCYVVPQNELLPKKLFEVIRKLN 317
>sp|A5GW69|MURG_SYNR3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Synechococcus sp. (strain RCC307) GN=murG
PE=3 SV=1
Length = 360
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQS 122
FS I L+ A L IS AG+GS+ E G P ++V D+HQS
Sbjct: 236 FSEEIPALLQHADLAISRAGAGSLSELAVCGTPAVLVPFPQAADDHQS 283
>sp|Q17WB5|MURG_HELAH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter acinonychis (strain Sheeba)
GN=murG PE=3 SV=1
Length = 353
Score = 36.6 bits (83), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 38 ELTRRGY--THLLIQMGRGTYVPTKSLGED-GLM-AVDYFTFSSSIADHLRSASLVISHA 93
+LT++G TH+ G +Y + ++ GL+ + F F ++I + ++ A L +S A
Sbjct: 199 KLTKQGIEITHI---CGPNSYERVRFFYQELGLLDKIVLFAFHNNIIEVMQKADLCVSRA 255
Query: 94 GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-----PQSLHQVIAG 148
G+ S++E +G P I + +NHQ E Y P+ L +VI
Sbjct: 256 GASSVWELCANGLPTIFIPYPFASNNHQYHNVLEFEKENLCYVVPQNELLPKKLFEVIRK 315
Query: 149 MD 150
++
Sbjct: 316 LN 317
>sp|A6LEU3|MURG_PARD8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=murG PE=3 SV=1
Length = 368
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 45 THLLIQMGRGTYV-PTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLR 103
++ Q GR Y +K L M V F + + +A LVIS AG+ SI E
Sbjct: 222 VQVIWQTGRYYYSDASKHLKAYRGMPVWCSDFITRMDYAYSAADLVISRAGASSISELCL 281
Query: 104 HGKPLIVVVNEDLMDNHQSELA 125
GKP+++V + ++ ++HQ++ A
Sbjct: 282 LGKPVVLVPSPNVAEDHQTKNA 303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,062,436
Number of Sequences: 539616
Number of extensions: 2430743
Number of successful extensions: 7827
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 7611
Number of HSP's gapped (non-prelim): 257
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)