BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042758
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 78 PSKF----FMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDE 131
P+KF F +FD N DG I F E+I L VT + AFK++DL+N+G I R+E
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE 120
Query: 132 FKKVMNLM 139
+++ +
Sbjct: 121 MLDIVDAI 128
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDT 338
+G L FQ+ + +F+VFD N+DG I EF++ L R T
Sbjct: 40 SGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGT 96
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 80 KFFMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
+ F FD N DG I F EY+ L + L + FK++D++ NG IDR E ++
Sbjct: 56 QMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115
Query: 138 LMRSENK 144
+R+ N+
Sbjct: 116 AIRAINR 122
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 79 SKFFMLFDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEF---- 132
+ F +FD +N+G I F E+I ++ S E S AF+++DLN++G I DE
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
Query: 133 ---KKVMNLMRSENKQAA 147
K+M M + N+ A
Sbjct: 126 ASVYKMMGSMVTLNEDEA 143
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 72 GELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL--------------SIPESSFSVAFK 117
G L S F L+D N+DG I+F E + V + + PE FK
Sbjct: 95 GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
Query: 118 MFDLNNNGEIDRDEFKK 134
+ D N +G I DEF++
Sbjct: 155 LMDKNEDGYITLDEFRE 171
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARP 341
+G L + DF + + ++ + +F VFD + +G I +EF+ VL R T
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99
Query: 342 R 342
+
Sbjct: 100 K 100
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 85 FDTNNDGLISFPEYILFVTLLSIP--ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
FDTN DG + F E+I V L+ E FK++D + NG ID++E + +++
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQAL 125
Query: 143 NKQ 145
N Q
Sbjct: 126 NGQ 128
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 81 FFMLFDTNNDGLISFPEYI-LFVTLLSI-------PESSFSVAFKMFDLNNNGEIDRDEF 132
+F L+D + +G I E + +F+ + ++ PE ++ F D+NN+GE+ +EF
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 64 FLRGERVPGELLCAPSKFFML----FDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMF 119
F+ + + G+ +P +F L D NNDG ++ E F+ ++ + + +K F
Sbjct: 119 FMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEE---FINGMAKDQDLLEIVYKSF 175
Query: 120 DLNN 123
D +N
Sbjct: 176 DFSN 179
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIP--ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
F FD N DG I F E+I+ +++ S E AF M+DL+ NG I + E +++ +
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 301 SISDNVVDVIFHVFDTNRDGSISPDEFVR 329
S + + IF DTNRDG +S +EF+R
Sbjct: 143 STPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F EY++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 129 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 173
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQ 332
+G +T+++FQ SK + +F FD N DG++ E+V L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F EY++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 129 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 173
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQ 332
+G +T+++FQ SK + +F FD N DG++ E+V L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F EY++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 70 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 130 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 174
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQ 332
+G +T+++FQ SK + +F FD N DG++ E+V L
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 91
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F EY++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 129 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 173
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQ 332
+G +T+++FQ SK + +F FD N DG++ E+V L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 85 FDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
DT+ DG +S PE+ F+ + + + F D N NG+I RDEF +N
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 85 FDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
DT+ DG +S PE+ F+ + + + F D N NG+I RDEF +N
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 81 FFMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEF 132
F FDTN D I F EY+ L + L E FK++D + NG IDR E
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQEL 117
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 304 DNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+ VVD IF + D N DG +S +EFV +R
Sbjct: 147 EEVVDRIFLLVDENGDGQLSLNEFVEGARR 176
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 23 VFEYFASFRTPGGDVLMTPADLMRAIVP-VFPPSESTRVREGFLRGERVPGELLCAPSKF 81
+F+Y A G D +T +R +F E++ R + G V G
Sbjct: 59 LFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNR---VLGPVVKG--------I 107
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEF 132
+ D N DG I+ E+ ++T L + ++ + AF D N NGE+ DE
Sbjct: 108 VGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDEL 158
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 78 PSKF----FMLFDTNNDGLISFPEYILFVTLLSIPE--SSFSVAFKMFDLNNNGEIDRDE 131
PS F F +FD + +G I F E+I +++ S E AF+++DL+NNG I DE
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120
Query: 132 FKKVMNLM 139
++++ +
Sbjct: 121 MLRIVDAI 128
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 14/65 (21%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLL--------------SIPESSFSVAFKMFDLNNNGEI 127
F L+D +N+GLIS+ E + V + PE + F M D N +G++
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQL 164
Query: 128 DRDEF 132
+EF
Sbjct: 165 TLEEF 169
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRER 336
+G L K +FQ+ + + +F+VFD +++G I EF+ L R
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR 94
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD++N G IS E + + ++ D NN+GE+D DEF++++
Sbjct: 447 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 86 DTNNDGLISFPEYILFV----TLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
D + +G I + E++ TLLS AF+MFD +N+G+I E + +
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATIFGV 469
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD++N G IS E + + ++ D NN+GE+D DEF++++
Sbjct: 448 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 86 DTNNDGLISFPEYILFV----TLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
D + +G I + E++ TLLS AF+MFD +N+G+I E + +
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATIFGV 470
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F +Y++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 129 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 173
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESS--FSVAFKMFDLNNNGEIDRDEFKKVMN-L 138
F FD N+DG + F +Y++ + + S +++ AF ++D++ NG I ++E +++ +
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
+ + + +H P++ E I FFGK L + F++
Sbjct: 129 FKMISPEDTKHLPEDE---NTPEKRAEK---IWGFFGKKDDDKLTEKEFIE 173
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD++N G IS E + + ++ D NN+GE+D DEF++++
Sbjct: 424 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 86 DTNNDGLISFPEYILFV----TLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKV 135
D + +G I + E++ TLLS AF+MFD +N+G+I E +
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLS--RERLERAFRMFDSDNSGKISSTELATI 443
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 80 KFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVA-----FKMFDLNNNGEIDRDEFKK 134
++F DT+ G IS PE ++ +P FS+A M+D N++GEI DEFK
Sbjct: 31 EWFRAVDTDGSGAISVPELNAALSSAGVP---FSLATTEKLLHMYDKNHSGEITFDEFKD 87
Query: 135 VMNLMRSENKQAARHRD 151
+ + + S ++ R RD
Sbjct: 88 LHHFILSM-REGFRKRD 103
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 81 FFMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F FDT+++G +SF ++I L + L + + AF ++D+N +G I ++E +M
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIM 164
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARP 341
+GV+ + F+ S+ S +F+ FDT+ +G++S ++F++ L R T +
Sbjct: 79 SGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE 138
Query: 342 R 342
+
Sbjct: 139 K 139
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 307 VDVIFHVFDTNRDGSISPDEFVRVLQRRER 336
V+ F D N+DG ++ DEF+ Q+ E
Sbjct: 188 VETFFQKMDKNKDGVVTIDEFIESCQKDEN 217
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 84 LFDTNNDGLISFPEYILFVTLLSIP---ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140
+FDT+ +G + F E+I V+ S+ E AF+++D++ +G I E +V+ +M
Sbjct: 60 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 141 SEN 143
N
Sbjct: 120 GNN 122
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 84 LFDTNNDGLISFPEYILFVTLLSIP---ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140
+FDT+ +G + F E+I V+ S+ E AF+++D++ +G I E +V+ +M
Sbjct: 61 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 141 SEN 143
N
Sbjct: 121 GNN 123
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 84 LFDTNNDGLISFPEYILFVTLLSIP---ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140
+FDT+ +G + F E+I V+ S+ E AF+++D++ +G I E +V+ +M
Sbjct: 46 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 105
Query: 141 SEN 143
N
Sbjct: 106 GNN 108
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 84 LFDTNNDGLISFPEYILFVTLLSIP---ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140
+FDT+ +G + F E+I V+ S+ E AF+++D++ +G I E +V+ +M
Sbjct: 47 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 106
Query: 141 SEN 143
N
Sbjct: 107 GNN 109
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F FD++N G IS E + + ++ D NN+GE+D DEF++ +
Sbjct: 424 FRXFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 81 FFMLFDTNNDGLISFPEYILFVTLLSI--PESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
F D N DG +S+ E FV+ E + FK D + NGEID++EF K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 139 MRSEN 143
++ ++
Sbjct: 65 IQGQD 69
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 84 LFDTNNDGLISFPE----------YILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFK 133
LFD+NNDG + E ++L + + F+ AF+++D + NG ID +E
Sbjct: 155 LFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELD 214
Query: 134 KVMNLMRSENKQ 145
++ + +NKQ
Sbjct: 215 ALLKDLCEKNKQ 226
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 288 RDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARPREPGFK 347
+D A+K + D++ +FD+N DG + E R+L +E + F+
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLK-----FQ 184
Query: 348 GLITCWK 354
G+ C K
Sbjct: 185 GIKMCGK 191
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 81 FFMLFDTNNDGLISFPEYILFVTLLSI--PESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
F D N DG +S+ E FV+ E + FK D + NGEID++EF K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 139 MRSENKQAARHRDGRRVGFKAPD 161
++ ++ + + G +V +K D
Sbjct: 65 IQGQD--LSDDKIGLKVLYKLMD 85
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 36.6 bits (83), Expect = 0.020, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 18 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 10 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 81 FFMLFDTNNDGLISFPEYILFVTLLSI--PESSFSVAFKMFDLNNNGEIDRDEFKK 134
F D N DG +S+ E FV+ E + FK D + NGEID++EF K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 9 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 68
Score = 28.1 bits (61), Expect = 8.4, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 109 ESSFSVAFKMFDLNNNGEIDRDEFK 133
E S F+MFD N +G ID DE K
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELK 29
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 36.6 bits (83), Expect = 0.024, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 8 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 36.6 bits (83), Expect = 0.024, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 13 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 81 FFMLFDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
F D N DG +S+ E FV+ E + FK D++ NGEID EF K
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 139 MRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDLHEEI 198
++ ++ + + G ++ +K D DG L E F + E
Sbjct: 65 VKEQD--LSDEKVGLKILYKLMDA--------------DGDGKLTKEEVTTFFKKFGYEK 108
Query: 199 LQLEFAHYDCKLRGTISAKDF 219
+ + D G I+ ++F
Sbjct: 109 VVDQIMKADANGDGYITLEEF 129
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F FD+N DG + F EY+ L T AF ++D++ NG I ++E +++
Sbjct: 77 FRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E IL T + E K D NN+G ID DEF K+M
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F ++D N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 98 SDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F +FD N DG I E +L T +I E K D NN+G ID DE+ + M
Sbjct: 98 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 86 DTNNDGLISFPEYILFVT------LLSIPESSFSVAFKMFDLNNNGEIDRDEFK 133
D + G + F E+++ + E S F+MFD N +G ID DE K
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + DG I FPE+++ + + E AF++FD + NG I E + VM
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 402
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 403 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 437
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 81 FFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEF 132
FF DTN D IS EY +F +L + ++ +F D NN+G + +EF
Sbjct: 99 FFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEF 150
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 76 CAPSKFFMLFDTNNDGLISFPEYIL 100
AP+ F + DTNNDGL+S E+++
Sbjct: 129 MAPASFDAI-DTNNDGLLSLEEFVI 152
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVT---LLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + DG I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 411
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 412 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVT---LLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + DG I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 410
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 411 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVT---LLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + DG I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 410
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 411 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 445
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDE 131
S F +FD N DG I E +L T +I E K D NN+G ID DE
Sbjct: 98 SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 86 DTNNDGLISFPEYILFVT------LLSIPESSFSVAFKMFDLNNNGEIDRDEFK 133
D + G + F E+++ + E S F+MFD N +G ID DE K
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
S F + D N DG I E +L T +I E K D NN+G ID DEF + M
Sbjct: 98 SDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + DG I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 56 DADGDGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 110
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 111 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 145
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 203 FAHYDCKLRGTISAKDFALSLVA---SADLSQVNKLLDRVDEIGNEPKLRPIRITYKEF- 258
F +D GTI AK+ +++ A ++ K++ +D+ G+ I ++EF
Sbjct: 34 FDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT------IDFEEFL 87
Query: 259 ----KDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
E + + L +G +T +D +R A K G ++++ + +
Sbjct: 88 TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVA-KELGENLTEEELQEMIAEA 146
Query: 315 DTNRDGSISPDEFVRVLQR 333
D N D I DEF+R++++
Sbjct: 147 DRNDDNEIDEDEFIRIMKK 165
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 67 GERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNN 124
GER E + K F LFD +N G I+ + L ++ E D N++
Sbjct: 95 GERDSREEIL---KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 151
Query: 125 GEIDRDEFKKVM 136
EID DEF ++M
Sbjct: 152 NEIDEDEFIRIM 163
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + DG I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 356 DADGDGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 410
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 411 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 445
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 45 MRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSK-------FFMLFDTNNDGLISFPE 97
+ A+ +F S + +G + E L K F LFDT ++G++ F E
Sbjct: 47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 106
Query: 98 YILFVTLL--SIP-ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSEN 143
+ +++ + P + +F+++DL G I+R E K+++ +E+
Sbjct: 107 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES 155
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFK 259
FA +D GTI+ K+ SL + +++ +++ VD GN I + EF
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 260 DFAELRKQLQFLSLAIFTYGKV-----NGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
+ + Q + KV NG+++ + + + + G ++D+ VD +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEMIREA 128
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG I+ +EFVR++
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLLS------IPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F++L++ E AFK+FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFK 259
FA +D GTI+ K+ SL + +++ +++ VD GN I + EF
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT------IDFPEFL 69
Query: 260 DFAELRKQLQFLSLAIFTYGKV-----NGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
+ + Q + KV NG+++ + + + + G ++D+ VD +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEMIREA 128
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG I+ +EFVR++
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLLS------IPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F++L++ E AFK+FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM 109
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 80 KFFMLFDTNNDGLISFPEYI--LFVTLLSIP-ESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
+ F +FD +G+I F E++ L V S P AFK++DL G I+R+E K+++
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Query: 137 NLMRSENK 144
+ E++
Sbjct: 138 VALLHESE 145
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331
+G++ K +FQ A + + + D IF VFD R+G I EFVR L
Sbjct: 53 DGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSL 100
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S E F+ DL+N+GE+D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTR 173
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 80 KFFMLFDTNNDGLISFPEYI--LFVTLLSIP-ESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
+ F +FD +G+I F E++ L V S P AFK++DL G I+R+E K+++
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Query: 137 NLMRSENK 144
+ E++
Sbjct: 138 VALLHESE 145
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331
+G++ K +FQ A + + + D IF VFD R+G I EFVR L
Sbjct: 53 DGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSL 100
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 45 MRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSK-------FFMLFDTNNDGLISFPE 97
+ A+ +F S + +G + E L K F LFDT ++G++ F E
Sbjct: 16 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 75
Query: 98 YILFVTLL--SIP-ESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
+ +++ + P + +F+++DL G I+R E K+++
Sbjct: 76 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 117
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331
NG ++ + + +++ G +SD VD + DT+ DG ++ +EFVRVL
Sbjct: 97 NGFVSAAELRHVMTRL-GEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 85 FDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141
D + +G + FPE++ + + E AF++FD + NG + E + VM
Sbjct: 55 IDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMT---- 110
Query: 142 ENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
R+G K D+ V+ + DG + +E FV+ L
Sbjct: 111 ------------RLGEKLSDEEVDE---MIRAADTDGDGQVNYEEFVRVL 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM +
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + DQ + + DG + +E FVQ +
Sbjct: 114 ------------GEKLTDEEVDQMIREADI-------DGDGQVNYEEFVQMM 146
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 411
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 412 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 446
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRPIRITY---- 255
F+ +D GTI+ K+ SL + +++ +++ VD GN P +T
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARW 376
Query: 256 -KEFKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
K+ E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 377 MKDTDSEEEIREAFRVFDK------DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 430 DIDGDGQVNYEEFVQMMTAK 449
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 79 SKFFMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
++ F +FD N DG I E I + + + K D NN+G ID DEF K+M
Sbjct: 96 AELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 111
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 112 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 146
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 109 ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRV--GFKAPDQSVEN 166
E + F FD + NG IDR +F M +E AAR G+ + G +A Q +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL-- 60
Query: 167 GGVIEYFFGKDGQTCLRHERF----VQFLRD-------LHEEILQLEFAHYDCKLRGTIS 215
G+ + +DG + E F V+ LRD + L D G ++
Sbjct: 61 AGIAD----RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVT 116
Query: 216 AKDFALSLVA 225
D A +L A
Sbjct: 117 VADTARALTA 126
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 21/108 (19%)
Query: 86 DTNNDGLISFPEYILFVT--LLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSEN 143
D + +G I FPE++ + + AF++FD + NG I E + VM
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMT------ 105
Query: 144 KQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 106 ----------NLGEKLTDEEVDE-MIREANIDGDGQ--VNYEEFVQMM 140
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVT---LLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT----- 411
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 412 -----------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 446
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNE----PKLRPIRITY 255
F+ +D GTI+ K+ SL + +++ +++ VD GN P+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 256 KEFKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFD 315
++ D E ++ + +F NG ++ + + + + G ++D VD + D
Sbjct: 377 MKYTDSEEEIRE----AFRVFDK-DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREAD 430
Query: 316 TNRDGSISPDEFVRVLQRR 334
+ DG ++ +EFV+++ +
Sbjct: 431 IDGDGQVNYEEFVQMMTAK 449
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 111
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 112 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 108
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 109 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 143
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 74 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 127 DIDGDGQVNYEEFVQMMTAK 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 110
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 111 --------------NLGEKLTDEEVDE-MIREANIDGDGQ--VNYEEFVQMM 145
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S + F+ DL+N+G++D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 111
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 112 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 146
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 111
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 112 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 62 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 116
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 117 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 110
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 111 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 145
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S + F+ DL+N+G++D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 58 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 112
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 113 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 147
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 67 GERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNN 124
GER E + K F LFD +N G I+ + L ++ E D N++
Sbjct: 3 GERDSREEIL---KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 59
Query: 125 GEIDRDEFKKVM 136
EID DEF ++M
Sbjct: 60 NEIDEDEFIRIM 71
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G +T +D +R A K G ++++ + + D N D I DEF+R++++
Sbjct: 23 SGTITIKDLRRVA-KELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 110
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 111 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 60 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 114
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 115 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 149
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S + F+ DL+N+G++D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 52 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 106
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 107 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 141
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 71
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 72 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 124
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 125 DIDGDGQVNYEEFVQMMTAK 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 108
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 109 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 143
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 74 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 127 DIDGDGQVNYEEFVQMMTAK 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 53 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 107
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 108 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 142
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 72
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 73 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 125
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG ++ +EFV+++
Sbjct: 126 DIDGDGQVNYEEFVQMM 142
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 357 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 411
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 412 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 446
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 377 MKDTDSEEEIREAFRVFDK------DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 430 DIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 358 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 412
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 413 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 447
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 318 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 377
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 378 MKDTDSEEEIREAFRVFDK------DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 430
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 431 DIDGDGQVNYEEFVQMMTAK 450
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 357 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 411
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 412 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 446
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 377 MKDTDSEEEIREAFRVFDK------DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
Query: 315 DTNRDGSISPDEFVRVLQRR 334
D + DG ++ +EFV+++ +
Sbjct: 430 DIDGDGQVNYEEFVQMMTAK 449
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 54 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 108
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 109 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 143
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 74 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG ++ +EFV+++
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 55 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 109
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 110 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 144
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 74
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 75 MKDTDSEEEIREAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 127
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG ++ +EFV+++
Sbjct: 128 DIDGDGQVNYEEFVQMM 144
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 323 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 377
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 378 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 412
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 153 RRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDLHEEILQLEFAHYDCKLRG 212
+ +GFK E+G ++ + + + L E+ +F + F+ +D G
Sbjct: 248 KGIGFK------EDGNILGHKLEYNTRDQLTEEQIAEF---------KEAFSLFDKDGDG 292
Query: 213 TISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKEFKDF---AEL 264
TI+ K+ SL + +++ +++ VD GN P + + ++ KD E+
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 352
Query: 265 RKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISP 324
R+ + NG ++ + + + + G ++D VD + D + DG ++
Sbjct: 353 REAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 325 DEFVRVLQRR 334
+EFV+++ +
Sbjct: 406 EEFVQMMTAK 415
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEY--ILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD N DG I E I + + + K D NN+G ID DEF K+M
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 323 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 377
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 378 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 412
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 153 RRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDLHEEILQLEFAHYDCKLRG 212
+ +GFK E+G ++ + + + L E+ +F + F+ +D G
Sbjct: 248 KGIGFK------EDGNILGHKLEYNSRDQLTEEQIAEF---------KEAFSLFDKDGDG 292
Query: 213 TISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKEFKDF---AEL 264
TI+ K+ SL + +++ +++ VD GN P + + ++ KD E+
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI 352
Query: 265 RKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISP 324
R+ + NG ++ + + + + G ++D VD + D + DG ++
Sbjct: 353 REAFRVFD------KDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 325 DEFVRVLQRR 334
+EFV+++ +
Sbjct: 406 EEFVQMMTAK 415
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 320 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-- 374
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ V+ + E DGQ + +E FVQ +
Sbjct: 375 --------------NLGEKLTDEEVDE-MIREADIDGDGQ--VNYEEFVQMM 409
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 280 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 339
Query: 258 FKDF---AELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314
KD E+R+ + NG ++ + + + + G ++D VD +
Sbjct: 340 MKDTDSEEEIREAFRVFDK------DGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 392
Query: 315 DTNRDGSISPDEFVRVL 331
D + DG ++ +EFV+++
Sbjct: 393 DIDGDGQVNYEEFVQMM 409
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 62 EGFLRGERVPGEL----LCAPSKFFMLFD---TNNDGLISFPEYILF-VTLLSIPESSFS 113
+G++ E++ L L P F +L D ++ G I + E+I + + +
Sbjct: 66 KGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIY 125
Query: 114 VAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEY 172
AF++FD++N+GEI E + L K RD RV D N G I++
Sbjct: 126 CAFRVFDVDNDGEITTAELAHI--LYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDF 182
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 74 LLCAPSKFFMLFDTNNDGLISFPE--YILFV--TLLSIPESSFSVAFKMF---DLNNNGE 126
+ CA F +FD +NDG I+ E +IL+ +I + + +M D NN+G+
Sbjct: 124 IYCA----FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGK 179
Query: 127 IDRDEFKKVMNL 138
ID EF ++M L
Sbjct: 180 IDFHEFSEMMKL 191
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141
F FD + +G IS E L + ++ D NN+G++D +EF K++ + S
Sbjct: 432 FQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 491
Query: 142 ENK 144
N+
Sbjct: 492 NNE 494
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 86 DTNNDGLISFPEYILFV----TLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141
D + +G I + E++ +LLS + AF+ FD + NG+I DE V L
Sbjct: 400 DFDRNGYIDYSEFVTVAMDRKSLLS--KDKLESAFQKFDQDGNGKISVDELASVFGLDHL 457
Query: 142 ENK 144
E+K
Sbjct: 458 ESK 460
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
F FD++ G I+ E + + + ++ + D NN+GE+D +EF ++M
Sbjct: 403 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S + F+ DL+N G++D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 86 DTNNDGLISFPEYI-LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVM 107
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTN 317
KD E ++ + +F NG ++ + + + + G ++D VD + D +
Sbjct: 76 MKDSEEEIRE----AFRVFDKDG-NGFISAAELRHVMTNL-GEKLTDEEVDEMIREADID 129
Query: 318 RDGSISPDEFVRVLQRR 334
DG ++ +EFV ++ +
Sbjct: 130 GDGQVNYEEFVTMMTSK 146
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F FD++ G I+ E + + + ++ + D NN+GE+D +EF ++M
Sbjct: 129 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 115 AFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
AFK+FD N +G ID DEFK +M + E
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEE 40
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLS---IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138
F +FD N DG+I F E+ + + + ++ A K D + NG ID EF ++
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73
Query: 139 MRSENKQA 146
++ K++
Sbjct: 74 SKNALKES 81
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 109 ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRV--GFKAPDQSVEN 166
E + F FD + NG IDR +F + +E AAR G+ + G +A Q +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGL-- 60
Query: 167 GGVIEYFFGKDGQTCLRHERF----VQFLRD-------LHEEILQLEFAHYDCKLRGTIS 215
G+ + +DG + E F V+ LRD + L D G ++
Sbjct: 61 AGIAD----RDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVT 116
Query: 216 AKDFALSLVA 225
D A +L A
Sbjct: 117 VADTARALTA 126
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.6 bits (70), Expect = 0.78, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141
F FD + +G IS E L + ++ D NN+G++D +EF K++ + S
Sbjct: 149 FQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 208
Query: 142 ENK 144
N+
Sbjct: 209 NNE 211
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 85 FDTNNDGLISFPEYILFV----TLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140
FD N G I + E++ +LLS + AF+ FD + NG+I DE V L
Sbjct: 118 FDRN--GYIDYSEFVTVAMDRKSLLS--KDKLESAFQKFDQDGNGKISVDELASVFGLDH 173
Query: 141 SENK 144
E+K
Sbjct: 174 LESK 177
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILF--VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134
F +FD + G I+ E+ + ++ +S + F+ DL+++G++D DE +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTR 173
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 75
Query: 258 FKDFAELRKQLQFLSLAIFTYGK-VNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
KD K L A + K NG ++ + + + + G ++D VD + D
Sbjct: 76 MKDTDSEEK----LKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADV 130
Query: 317 NRDGSISPDEFVRVLQRR 334
+ DG ++ +EFV+V+ +
Sbjct: 131 DGDGQVNYEEFVQVMMAK 148
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM +
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNL--- 112
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + D+ + V DG + +E FVQ +
Sbjct: 113 ---------GEKLTDEEVDEMIREADV-------DGDGQVNYEEFVQVM 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM +
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--- 112
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + D+ + V DG + +E FVQ +
Sbjct: 113 ---------GEKLTDEEVDEMIREADV-------DGDGQVNYEEFVQVM 145
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 75
Query: 258 FKDFAELRKQLQFLSLAIFTYGK-VNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
KD + L A + K NG ++ + + + + G ++D VD + D
Sbjct: 76 MKD----TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADV 130
Query: 317 NRDGSISPDEFVRVLQRR 334
+ DG ++ +EFV+V+ +
Sbjct: 131 DGDGQVNYEEFVQVMMAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM +
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G + + D+ + + DG + +E FVQ +
Sbjct: 114 ------------GEXLTDEEVDEMIREADI-------DGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I FPE F+T++ + E AF++FD + NG I E + VM +
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G + + D+ + + DG + +E FVQ +
Sbjct: 113 ------------GEXLTDEEVDEMIREADI-------DGDGQVNYEEFVQMM 145
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSG-AGYRLSDQFHDILIRKFDR 121
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 122 QGRGQIAFDDFIQGCIVLQR 141
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G ++ + + A K+ G + ++ I D N DG + +EFVR++ R
Sbjct: 116 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
F FDTN DG IS E + L + + DLN +G +D +EF ++M+
Sbjct: 108 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D G I+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTN 317
KD + ++L+ + +F + NG ++ + + + + G ++D VD + D +
Sbjct: 77 MKD-TDSEEELK-EAFRVFDKDQ-NGFISAAELRHVMTNL-GEKLTDEEVDEMIREADVD 132
Query: 318 RDGSISPDEFVRVLQRR 334
DG I+ DEFV+V+ +
Sbjct: 133 GDGQINYDEFVKVMMAK 149
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 110
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
F +FD + +G IS E +T L + + + D++ +G+I+ DEF KVM
Sbjct: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM +
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--- 109
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + D+ + V DG + +E FVQ +
Sbjct: 110 ---------GEKLTDEEVDEMIREADV-------DGDGQVNYEEFVQVM 142
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D GTI+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 72
Query: 258 FKDFAELRKQLQFLSLAIFTYGK-VNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
KD + L A + K NG ++ + + + + G ++D VD + D
Sbjct: 73 MKD----TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADV 127
Query: 317 NRDGSISPDEFVRVLQRR 334
+ DG ++ +EFV+V+ +
Sbjct: 128 DGDGQVNYEEFVQVMMAK 145
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G ++ + + A K+ G + ++ I D N DG + +EFVR++ R
Sbjct: 102 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
F FDTN DG IS E + L + + DLN +G +D +EF ++M+
Sbjct: 94 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
D + +G I F E F++L+ + E AFK+FD + NG I E + VM
Sbjct: 56 DADGNGTIEFDE---FLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--- 109
Query: 140 RSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
+G K D+ VE + E DGQ + +E FV+ +
Sbjct: 110 -------------INLGEKLTDEEVEQ-MIKEADLDGDGQ--VNYEEFVKMM 145
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 82 FMLFDTNNDGLISFPE--YILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
F +FD + +G IS E +++ + + K DL+ +G+++ +EF K+M +
Sbjct: 89 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
Query: 140 R 140
R
Sbjct: 149 R 149
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/55 (21%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 93 ISFPEYILFVTLLS---IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENK 144
+SF +++ +++ S P+ AF++FD +++G ++R++ +++N + E +
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 163
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 282 NGVLTKRDFQRAASKVCG------ISISD--NVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G L + D R + + G +S S+ ++D I D +RDG+I+ EF V+ R
Sbjct: 143 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLLSIPESSFSV--AFKMFDLNNNGEIDRDEFKK 134
F +FD + G IS E+ + + I S FK DL+N+G++D DE +
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTR 176
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/55 (21%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 93 ISFPEYILFVTLLS---IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENK 144
+SF +++ +++ S P+ AF++FD +++G ++R++ +++N + E +
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 132
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 282 NGVLTKRDFQRAASKVCG------ISISD--NVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G L + D R + + G +S S+ ++D I D +RDG+I+ EF V+ R
Sbjct: 112 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 82 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDR 140
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 141 QGRGQIAFDDFIQGCIVLQR 160
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 60 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS---GYRLSDQFHDILIRKFDR 116
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 117 QGRGQIAFDDFIQGCIVLQR 136
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDR 121
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 122 QGRGQIAFDDFIQGCIVLQR 141
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 81 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDR 139
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 140 QGRGQIAFDDFIQGCIVLQR 159
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 27/124 (21%)
Query: 74 LLCAPSKFFML-----FDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNG 125
L C P++ + D + +G I+FPE++ + E AF++FD + NG
Sbjct: 39 LGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNG 98
Query: 126 EIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHE 185
I E + V +G K D+ V+ + E DGQ + +E
Sbjct: 99 YISAAELRHVXT----------------NLGEKLTDEEVDE-XIREADIDGDGQ--VNYE 139
Query: 186 RFVQ 189
FVQ
Sbjct: 140 EFVQ 143
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 60 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDR 118
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 119 QGRGQIAFDDFIQGCIVLQR 138
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 68 ERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNG 125
ER+ E + + F + DT+N G I+F E + + + ES D++ +G
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61
Query: 126 EIDRDEF 132
ID EF
Sbjct: 62 TIDYGEF 68
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G ++ + + A K+ G + ++ I D N DG + +EFVR++ R
Sbjct: 21 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 72
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
F FDTN DG IS E + L + + DLN +G +D +EF ++M+
Sbjct: 13 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVN-GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316
F +F + K + TY + N G++ K + ++A S G +SD D++ FD
Sbjct: 59 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDR 117
Query: 317 NRDGSISPDEFVR---VLQR 333
G I+ D+F++ VLQR
Sbjct: 118 QGRGQIAFDDFIQGCIVLQR 137
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 109
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE++ + + E AF++FD + NG I E + VM
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 109
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 86 DTNNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136
D + +G I FPE F+T++ + E AF++FD + NG I E + VM
Sbjct: 57 DADGNGTIDFPE---FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 110
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + + E AF++FD + NG I E + VM +
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--- 113
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + D+ + V DG + +E FV+ +
Sbjct: 114 ---------GEKLTDEEVDEMIREADV-------DGDGQINYEEFVKVM 146
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 203 FAHYDCKLRGTISAKDFAL---SLVASADLSQVNKLLDRVDEIGNEPKLRP--IRITYKE 257
F+ +D G I+ K+ SL + +++ +++ VD GN P + + ++
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
Query: 258 FKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTN 317
KD + ++L+ + +F + NG ++ + + + + G ++D VD + D +
Sbjct: 77 MKD-TDSEEELK-EAFRVFDKDQ-NGFISAAELRHVMTNL-GEKLTDEEVDEMIREADVD 132
Query: 318 RDGSISPDEFVRVLQRR 334
DG I+ +EFV+V+ +
Sbjct: 133 GDGQINYEEFVKVMMAK 149
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 115 AFKMFDLNNNGEIDRDEFKKVMNLM 139
AF+++DL+ +G+I R E +V+ LM
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLM 143
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 22/107 (20%)
Query: 86 DTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142
D + +G I FPE++ + E AF++FD + NG I E + V +
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--- 113
Query: 143 NKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189
G ++ + DQ + + DG + +E FVQ
Sbjct: 114 ---------GEKLTDEEVDQXIREADI-------DGDGQVNYEEFVQ 144
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 106 SIPE--SSFSVAFKMFDLNNNGEIDRDEFKKVM 136
++PE ++F + FDLNN GEID K++M
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 307 VDVIFHVFDTNRDGSISPDEFVRVLQ 332
VDV F D N+DG ++ DEF+ Q
Sbjct: 175 VDVFFQKMDKNKDGIVTLDEFLESCQ 200
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSF 112
A K D N DG + F EY++ V L++ ++F
Sbjct: 53 AVDKVMKELDENGDGEVDFQEYVVLVAALTVAXNNF 88
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 106 SIPE--SSFSVAFKMFDLNNNGEIDRDEFKKVM 136
++PE ++F + FDLNN GEID K++M
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 82 FMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMN 137
F FDTN DG IS E + L + + DLN +G +D +EF ++M+
Sbjct: 94 FREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
+G ++ + + A + G + ++ I D N DG + +EFVR++ R
Sbjct: 102 DGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 116 FKMFDLNNNGEIDRDE--FKK---VMNLMRSENKQAARHRD 151
F D+N+NG+I DE +K V+N + + +QA RH+D
Sbjct: 22 FNFLDVNHNGKISLDEXVYKASDIVINNLGATPEQAKRHKD 62
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 307 VDVIFHVFDTNRDGSISPDEFVRVLQR 333
VDV F D N+DG ++ DEF+ Q
Sbjct: 139 VDVFFQKMDKNKDGIVTLDEFLESCQE 165
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 307 VDVIFHVFDTNRDGSISPDEFVRVLQR 333
VDV F D N+DG ++ DEF+ Q
Sbjct: 139 VDVFFQKMDKNKDGIVTLDEFLESCQE 165
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 307 VDVIFHVFDTNRDGSISPDEFVRVLQ 332
VDV F D N+DG ++ DEF+ Q
Sbjct: 142 VDVFFQKMDKNKDGIVTLDEFLESXQ 167
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 77 APSKFFMLFDTNNDGLISFPEYILFVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKK 134
+ + F FD N DG +S E+ S + F+ D++ NGE++ DEF
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 135 VMNLM 139
+ M
Sbjct: 62 CIEKM 66
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 21/95 (22%)
Query: 115 AFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFF 174
AF+++DL+ + +I RDE +V+ +M VG D+ + G + +
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMM---------------VGVNISDEQL--GSIADRTI 160
Query: 175 ---GKDGQTCLRHERFVQFLRDLH-EEILQLEFAH 205
+DG + + FV+ L + E+ + + F H
Sbjct: 161 QEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH 195
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 116 FKMFDLNNNGEIDRDEF-----KKVMNLMRSENKQAARHRD 151
F D+N+NG+I DE V+N + + +QA RH+D
Sbjct: 22 FNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKD 62
>pdb|2CCM|A Chain A, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
pdb|2CCM|B Chain B, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
Length = 191
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 66 RGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNG 125
+GE +P L + F + DT+ D +I EY IP+S AF
Sbjct: 99 KGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKT 158
Query: 126 EIDRDEFKKVMNLMRSENKQAAR 148
+ R+ F ++ N + A+
Sbjct: 159 MVTREIFARLWTEYFVSNDRGAK 181
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 28.5 bits (62), Expect = 6.8, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 82 FMLFDTNNDGLISFPE--YILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
F +FD + +G IS E +++ + + K DL+ +G+++ +EF K+M +
Sbjct: 15 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74
Query: 140 RSENKQAARHRDGRR 154
R R R+
Sbjct: 75 RGGGGGNGWSRLRRK 89
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 75 LCAPSKFFMLFD---TNNDGLISFPEYILF-VTLLSIPESSFSVAFKMFDLNNNGEIDRD 130
L P F +L D ++ G I + E++ + + + AF++FD++N+GEI
Sbjct: 86 LMLPPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTA 145
Query: 131 EFKKVM 136
E V+
Sbjct: 146 ELAHVL 151
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 28.1 bits (61), Expect = 7.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 82 FMLFDTNNDGLISFPE--YILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139
F +FD + +G IS E +++ + + K DL+ +G+++ +EF K+M +
Sbjct: 10 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 69
Query: 140 R 140
R
Sbjct: 70 R 70
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.1 bits (61), Expect = 8.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSF 112
A K D N DG + F EY++ V L++ ++F
Sbjct: 53 AVDKVMKELDENGDGEVDFQEYVVLVAALTVAMNNF 88
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333
G ++ ++ +R A K G +++D + + D + DG +S EF+R++++
Sbjct: 93 TGKISFKNLKRVA-KELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 28.1 bits (61), Expect = 8.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 67 GERVPGELLCAPSKFFMLFDTNNDGLISFPEYI--LFVTLLSIPESSFSVAFKMFDLNNN 124
ER+ E + + F + DT+N G I+F E L + ES D++ +
Sbjct: 14 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 73
Query: 125 GEIDRDEF 132
G ID EF
Sbjct: 74 GTIDYGEF 81
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 283 GVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRV 330
G ++ ++ +R A K G +++D + + FD + DG I+ +EF+ +
Sbjct: 111 GKISIKNLRRVA-KELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 232 VNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQF------LSLAIFTYGKVNGVL 285
V + D+ ++GN+ K + ++ +F E R L + L++ T K +L
Sbjct: 94 VQRAFDKAKDLGNKVK----GVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLL 149
Query: 286 TK-RDFQRAASKV--CGISISDNVVDVIFHVFDTNRDGSISPDEF 327
+ ++F+ A K+ G+ I+D +F+ DTN G ++ DEF
Sbjct: 150 LELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEF 192
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 116 FKMFDLNNNGEIDRDEF-----KKVMNLMRSENKQAARHRD 151
F D+N+NG I DE V+N + + +QA RH+D
Sbjct: 22 FNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKD 62
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 25/141 (17%)
Query: 116 FKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEY--- 172
F+ D NN+G +DRDE + H R G + G IE
Sbjct: 337 FRKLDTNNDGMLDRDELVR------------GYHEFMRLKGVDSNSLIQNEGSTIEDQID 384
Query: 173 ----FFGKDGQTCLRHERFVQFLRD----LHEEILQLEFAHYDCKLRGTISAKDFALSLV 224
DG + + F+ D L E ++ F +D G IS K+ L
Sbjct: 385 SLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL-FKLF 443
Query: 225 ASADLS-QVNKLLDRVDEIGN 244
+ AD S Q+ +L ++++ N
Sbjct: 444 SQADSSIQMEELESIIEQVDN 464
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 21/95 (22%)
Query: 115 AFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFF 174
AF+++DL+ + +I RDE +V+ +M VG D+ + G + +
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMM---------------VGVNISDEQL--GSIADRTI 160
Query: 175 ---GKDGQTCLRHERFVQFLRDLH-EEILQLEFAH 205
+DG + + FV+ L + E+ + + F H
Sbjct: 161 QEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH 195
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 27.7 bits (60), Expect = 9.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331
NG+++ + + + + G ++D+ VD + D + DG I+ +EFVR++
Sbjct: 22 NGLISAAELRHVMTNL-GEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 88 NNDGLISFPEYILFVTLL------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141
+ +G I FP+ F+T++ + E AF++F + NG I + + VM +
Sbjct: 359 DGNGTIDFPQ---FLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL-- 413
Query: 142 ENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFL 191
G ++ + D+ + G+ DG + +E+FVQ +
Sbjct: 414 ----------GEKLTDEEVDEMIREAGI-------DGDGQVNYEQFVQMM 446
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,687,442
Number of Sequences: 62578
Number of extensions: 442446
Number of successful extensions: 2478
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 1816
Number of HSP's gapped (non-prelim): 680
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)