Query 042758
Match_columns 364
No_of_seqs 270 out of 2711
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 09:08:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042758.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042758hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2643 Ca2+ binding protein, 100.0 9.2E-52 2E-56 361.0 24.1 358 1-363 120-484 (489)
2 KOG0751 Mitochondrial aspartat 99.9 1E-20 2.2E-25 168.5 19.9 276 20-335 35-316 (694)
3 COG5126 FRQ1 Ca2+-binding prot 99.8 1.1E-17 2.4E-22 131.6 14.9 131 197-335 20-158 (160)
4 KOG0027 Calmodulin and related 99.8 1.8E-17 4E-22 133.3 15.6 130 197-333 8-149 (151)
5 KOG0037 Ca2+-binding protein, 99.7 5.3E-17 1.1E-21 131.5 14.5 160 21-223 57-218 (221)
6 KOG0027 Calmodulin and related 99.7 1.8E-17 4E-22 133.3 10.8 132 20-192 10-148 (151)
7 KOG0037 Ca2+-binding protein, 99.7 7.2E-16 1.6E-20 124.9 16.8 128 110-263 57-187 (221)
8 COG5126 FRQ1 Ca2+-binding prot 99.7 6.4E-17 1.4E-21 127.3 10.4 128 22-191 24-154 (160)
9 KOG4223 Reticulocalbin, calume 99.7 9.2E-17 2E-21 137.5 11.9 224 69-329 70-301 (325)
10 KOG0044 Ca2+ sensor (EF-Hand s 99.7 9.5E-17 2.1E-21 130.9 10.8 112 15-143 20-133 (193)
11 KOG0028 Ca2+-binding protein ( 99.7 1.4E-15 3E-20 116.7 14.8 132 195-333 31-170 (172)
12 PTZ00184 calmodulin; Provision 99.7 4.2E-15 9E-20 119.7 15.4 131 197-334 11-149 (149)
13 PTZ00183 centrin; Provisional 99.6 1.1E-14 2.4E-19 118.5 16.4 129 198-333 18-154 (158)
14 KOG4223 Reticulocalbin, calume 99.5 1.4E-14 2.9E-19 124.3 8.2 199 6-241 62-288 (325)
15 KOG0028 Ca2+-binding protein ( 99.5 5.9E-14 1.3E-18 107.8 10.7 132 20-192 35-169 (172)
16 KOG0034 Ca2+/calmodulin-depend 99.5 1.5E-13 3.2E-18 112.3 12.4 141 20-226 32-176 (187)
17 PTZ00183 centrin; Provisional 99.5 1.1E-13 2.3E-18 112.7 11.2 88 34-139 29-119 (158)
18 KOG0031 Myosin regulatory ligh 99.5 9.6E-13 2.1E-17 100.4 15.0 129 195-334 30-166 (171)
19 KOG0034 Ca2+/calmodulin-depend 99.5 4.4E-13 9.5E-18 109.6 13.9 131 198-335 34-177 (187)
20 PTZ00184 calmodulin; Provision 99.5 7.7E-13 1.7E-17 106.4 12.5 63 77-139 12-76 (149)
21 KOG0030 Myosin essential light 99.4 1.8E-12 3.9E-17 97.2 11.2 131 197-333 11-151 (152)
22 KOG2643 Ca2+ binding protein, 99.4 1E-11 2.2E-16 110.4 17.2 248 34-364 211-489 (489)
23 KOG4251 Calcium binding protei 99.4 3.7E-12 7.9E-17 104.6 9.3 227 73-330 98-342 (362)
24 KOG0044 Ca2+ sensor (EF-Hand s 99.3 6.2E-11 1.4E-15 97.0 15.6 152 105-335 21-177 (193)
25 KOG0036 Predicted mitochondria 99.3 4.5E-11 9.8E-16 105.7 13.9 128 198-334 15-147 (463)
26 KOG0036 Predicted mitochondria 99.3 1.9E-11 4.1E-16 108.1 10.7 156 22-221 18-179 (463)
27 KOG0031 Myosin regulatory ligh 99.2 5.6E-10 1.2E-14 85.5 13.0 125 110-263 32-164 (171)
28 cd05022 S-100A13 S-100A13: S-1 99.2 1.6E-10 3.4E-15 83.0 8.0 70 266-335 5-77 (89)
29 KOG0030 Myosin essential light 99.1 1.2E-09 2.7E-14 82.1 12.4 125 108-260 9-147 (152)
30 PF13499 EF-hand_7: EF-hand do 99.1 9.8E-11 2.1E-15 80.1 6.1 60 271-331 2-66 (66)
31 PF13833 EF-hand_8: EF-hand do 99.1 1.8E-10 3.8E-15 75.3 5.7 53 281-334 1-54 (54)
32 KOG2562 Protein phosphatase 2 99.1 9.3E-09 2E-13 92.7 17.5 237 79-329 142-420 (493)
33 cd05027 S-100B S-100B: S-100B 99.1 1E-09 2.3E-14 78.9 8.8 70 266-335 5-81 (88)
34 cd05029 S-100A6 S-100A6: S-100 99.1 1.1E-09 2.4E-14 78.8 8.8 69 266-334 7-80 (88)
35 KOG4251 Calcium binding protei 99.0 1.7E-09 3.7E-14 89.2 9.4 176 16-225 96-309 (362)
36 cd05026 S-100Z S-100Z: S-100Z 99.0 2.1E-09 4.6E-14 78.5 8.9 70 265-334 6-82 (93)
37 KOG0377 Protein serine/threoni 99.0 1.2E-08 2.6E-13 91.1 13.1 140 198-342 465-626 (631)
38 cd05031 S-100A10_like S-100A10 98.9 1.1E-08 2.4E-13 75.0 8.5 69 266-334 5-80 (94)
39 cd05023 S-100A11 S-100A11: S-1 98.9 1.3E-08 2.9E-13 73.3 8.5 69 266-334 6-81 (89)
40 cd05025 S-100A1 S-100A1: S-100 98.8 1.5E-08 3.3E-13 74.0 7.9 70 266-335 6-82 (92)
41 KOG0038 Ca2+-binding kinase in 98.8 5E-08 1.1E-12 74.0 10.0 63 273-335 112-179 (189)
42 PF13499 EF-hand_7: EF-hand do 98.8 1.4E-08 2.9E-13 69.3 6.2 58 79-136 3-66 (66)
43 cd00052 EH Eps15 homology doma 98.8 2.3E-08 5E-13 68.4 6.9 60 272-334 2-62 (67)
44 cd00213 S-100 S-100: S-100 dom 98.8 5.3E-08 1.1E-12 70.6 8.3 70 266-335 5-81 (88)
45 smart00027 EH Eps15 homology d 98.7 5.6E-08 1.2E-12 71.6 8.1 65 268-335 9-74 (96)
46 cd05030 calgranulins Calgranul 98.7 5.7E-08 1.2E-12 70.1 7.9 69 267-335 6-81 (88)
47 PLN02964 phosphatidylserine de 98.7 1.2E-07 2.6E-12 91.7 11.2 100 197-335 143-245 (644)
48 PLN02964 phosphatidylserine de 98.7 7.1E-08 1.5E-12 93.2 9.4 100 21-139 143-244 (644)
49 cd00051 EFh EF-hand, calcium b 98.7 8E-08 1.7E-12 64.2 7.1 59 272-331 3-62 (63)
50 KOG0038 Ca2+-binding kinase in 98.7 5.5E-08 1.2E-12 73.8 6.1 63 79-141 74-139 (189)
51 cd00052 EH Eps15 homology doma 98.6 2.9E-07 6.3E-12 62.8 7.6 61 79-139 2-62 (67)
52 KOG0751 Mitochondrial aspartat 98.5 6.3E-06 1.4E-10 75.1 16.6 194 107-328 30-239 (694)
53 cd05022 S-100A13 S-100A13: S-1 98.5 4.1E-07 8.9E-12 65.4 7.5 65 77-141 9-78 (89)
54 cd00252 SPARC_EC SPARC_EC; ext 98.5 3.9E-07 8.5E-12 68.8 7.2 58 269-331 48-106 (116)
55 smart00027 EH Eps15 homology d 98.5 6.9E-07 1.5E-11 65.8 7.8 66 77-142 11-76 (96)
56 PF14658 EF-hand_9: EF-hand do 98.5 4.7E-07 1E-11 59.9 6.0 61 274-334 3-65 (66)
57 cd05024 S-100A10 S-100A10: A s 98.5 1.4E-06 3E-11 62.1 8.9 69 266-334 5-77 (91)
58 KOG0377 Protein serine/threoni 98.5 3.5E-06 7.6E-11 75.7 13.1 100 105-225 459-575 (631)
59 KOG0041 Predicted Ca2+-binding 98.5 9.4E-07 2E-11 71.0 8.2 78 255-335 87-165 (244)
60 cd05026 S-100Z S-100Z: S-100Z 98.5 8.2E-07 1.8E-11 64.8 7.3 63 78-140 12-83 (93)
61 PF00036 EF-hand_1: EF hand; 98.4 2.1E-07 4.6E-12 51.5 3.0 28 306-333 1-28 (29)
62 cd00252 SPARC_EC SPARC_EC; ext 98.4 7.2E-07 1.6E-11 67.4 6.8 58 77-136 49-106 (116)
63 cd05027 S-100B S-100B: S-100B 98.4 1.1E-06 2.4E-11 63.2 7.5 64 77-140 9-81 (88)
64 cd00051 EFh EF-hand, calcium b 98.4 1.9E-06 4.2E-11 57.3 7.0 58 79-136 3-62 (63)
65 KOG2562 Protein phosphatase 2 98.3 1.1E-05 2.4E-10 73.3 13.2 189 113-344 142-354 (493)
66 PF00036 EF-hand_1: EF hand; 98.3 6.3E-07 1.4E-11 49.6 2.7 26 79-104 3-28 (29)
67 PF13833 EF-hand_8: EF-hand do 98.3 3.2E-06 6.9E-11 54.9 6.0 50 89-138 1-53 (54)
68 cd05031 S-100A10_like S-100A10 98.3 4.6E-06 1E-10 61.1 7.6 62 78-139 10-80 (94)
69 cd05025 S-100A1 S-100A1: S-100 98.2 5.2E-06 1.1E-10 60.5 7.1 65 77-141 10-83 (92)
70 cd00213 S-100 S-100: S-100 dom 98.2 9.1E-06 2E-10 58.7 7.6 63 77-139 9-80 (88)
71 cd05029 S-100A6 S-100A6: S-100 98.2 8E-06 1.7E-10 58.7 7.1 62 79-140 13-81 (88)
72 cd05023 S-100A11 S-100A11: S-1 98.2 1E-05 2.2E-10 58.3 7.5 62 79-140 12-82 (89)
73 cd05024 S-100A10 S-100A10: A s 98.0 5.8E-06 1.3E-10 58.9 3.0 68 20-105 10-77 (91)
74 PF14788 EF-hand_10: EF hand; 97.9 2.7E-05 5.8E-10 48.5 4.8 48 285-333 2-49 (51)
75 PF13202 EF-hand_5: EF hand; P 97.9 1.5E-05 3.2E-10 42.4 2.6 25 307-331 1-25 (25)
76 PF12763 EF-hand_4: Cytoskelet 97.8 5E-05 1.1E-09 56.2 5.9 61 271-334 12-72 (104)
77 KOG0041 Predicted Ca2+-binding 97.8 0.00044 9.5E-09 56.0 10.7 72 184-262 87-161 (244)
78 PF13405 EF-hand_6: EF-hand do 97.7 3.6E-05 7.8E-10 43.5 2.8 27 111-137 1-27 (31)
79 KOG4666 Predicted phosphate ac 97.7 5.3E-05 1.1E-09 65.7 5.1 64 77-140 260-326 (412)
80 PF13202 EF-hand_5: EF hand; P 97.7 4.2E-05 9.1E-10 40.7 2.8 23 79-101 2-24 (25)
81 cd05030 calgranulins Calgranul 97.7 0.00021 4.5E-09 51.5 7.1 62 79-140 11-81 (88)
82 PRK12309 transaldolase/EF-hand 97.5 0.00016 3.5E-09 66.6 6.0 56 74-140 332-387 (391)
83 PF13405 EF-hand_6: EF-hand do 97.5 0.0001 2.2E-09 41.6 2.8 28 306-333 1-28 (31)
84 KOG0040 Ca2+-binding actin-bun 97.5 0.0011 2.4E-08 68.4 11.8 119 199-331 2255-2396(2399)
85 PF14658 EF-hand_9: EF-hand do 97.5 0.00041 8.9E-09 46.1 5.7 59 80-138 2-64 (66)
86 PF12763 EF-hand_4: Cytoskelet 97.5 0.00027 5.9E-09 52.3 5.4 61 79-140 13-73 (104)
87 PRK12309 transaldolase/EF-hand 97.4 0.00034 7.4E-09 64.5 6.3 50 271-334 336-386 (391)
88 PF10591 SPARC_Ca_bdg: Secrete 97.3 0.00011 2.3E-09 55.5 1.8 58 77-134 55-112 (113)
89 KOG0040 Ca2+-binding actin-bun 97.2 0.0049 1.1E-07 63.9 11.9 134 110-260 2253-2394(2399)
90 KOG4666 Predicted phosphate ac 97.1 0.00033 7.1E-09 60.9 2.6 169 157-335 181-361 (412)
91 PF09279 EF-hand_like: Phospho 97.0 0.00096 2.1E-08 47.5 4.0 72 271-342 2-78 (83)
92 PF14788 EF-hand_10: EF hand; 97.0 0.0026 5.6E-08 39.8 5.2 48 92-139 1-50 (51)
93 KOG1029 Endocytic adaptor prot 96.9 0.0035 7.6E-08 60.7 7.4 60 111-191 196-255 (1118)
94 PF10591 SPARC_Ca_bdg: Secrete 96.8 0.0011 2.4E-08 50.0 3.3 58 22-100 55-112 (113)
95 KOG0169 Phosphoinositide-speci 96.8 0.037 7.9E-07 54.2 13.5 138 198-341 137-282 (746)
96 smart00054 EFh EF-hand, calciu 96.6 0.0025 5.3E-08 34.4 3.0 27 307-333 2-28 (29)
97 KOG0046 Ca2+-binding actin-bun 96.3 0.013 2.9E-07 54.5 7.3 65 269-334 19-86 (627)
98 KOG4065 Uncharacterized conser 96.3 0.012 2.6E-07 43.2 5.5 56 275-330 73-142 (144)
99 smart00054 EFh EF-hand, calciu 96.3 0.0068 1.5E-07 32.5 3.3 25 79-103 3-27 (29)
100 KOG4065 Uncharacterized conser 95.6 0.0046 1E-07 45.4 0.9 77 19-101 64-142 (144)
101 KOG0169 Phosphoinositide-speci 95.6 0.19 4E-06 49.5 11.8 59 80-138 140-200 (746)
102 PF05517 p25-alpha: p25-alpha 94.9 0.034 7.5E-07 44.5 4.0 86 273-359 6-98 (154)
103 KOG0046 Ca2+-binding actin-bun 94.1 0.15 3.3E-06 47.8 6.5 71 111-198 20-90 (627)
104 KOG1955 Ral-GTPase effector RA 93.4 0.14 3.1E-06 47.6 5.1 59 274-335 236-295 (737)
105 KOG1029 Endocytic adaptor prot 93.0 0.14 3E-06 50.2 4.6 62 271-335 197-259 (1118)
106 KOG4578 Uncharacterized conser 92.4 0.08 1.7E-06 46.5 2.0 62 77-138 334-398 (421)
107 KOG0998 Synaptic vesicle prote 91.9 0.19 4E-06 51.7 4.2 250 77-335 12-347 (847)
108 KOG3555 Ca2+-binding proteogly 91.5 0.22 4.8E-06 44.2 3.7 61 77-139 251-311 (434)
109 KOG4347 GTPase-activating prot 91.2 0.2 4.3E-06 48.3 3.4 55 77-132 556-612 (671)
110 PLN02952 phosphoinositide phos 91.1 1.8 4E-05 42.4 9.9 85 250-334 14-111 (599)
111 KOG1707 Predicted Ras related/ 91.1 0.63 1.4E-05 44.7 6.4 67 197-268 315-381 (625)
112 PF09279 EF-hand_like: Phospho 90.1 0.59 1.3E-05 32.9 4.3 59 78-137 2-68 (83)
113 PF08976 DUF1880: Domain of un 89.9 0.23 4.9E-06 36.9 2.0 34 301-334 3-36 (118)
114 PF05042 Caleosin: Caleosin re 89.3 1.5 3.3E-05 35.3 6.4 29 197-225 96-124 (174)
115 KOG4578 Uncharacterized conser 88.8 0.34 7.4E-06 42.7 2.6 56 280-335 345-400 (421)
116 KOG1955 Ral-GTPase effector RA 88.5 0.7 1.5E-05 43.2 4.5 61 79-139 234-294 (737)
117 PF05042 Caleosin: Caleosin re 87.9 4.9 0.00011 32.5 8.4 58 271-330 98-163 (174)
118 PF05517 p25-alpha: p25-alpha 87.5 0.79 1.7E-05 36.7 3.8 69 21-105 2-70 (154)
119 cd07313 terB_like_2 tellurium 87.1 2.7 5.9E-05 30.9 6.4 74 280-359 11-85 (104)
120 KOG2243 Ca2+ release channel ( 86.5 5.8 0.00013 42.1 9.8 60 273-334 4061-4121(5019)
121 KOG3555 Ca2+-binding proteogly 86.1 0.83 1.8E-05 40.7 3.4 57 274-335 255-312 (434)
122 KOG1707 Predicted Ras related/ 85.0 8.3 0.00018 37.4 9.6 66 197-263 195-264 (625)
123 PF08726 EFhand_Ca_insen: Ca2+ 83.6 0.6 1.3E-05 31.6 1.2 53 269-329 6-65 (69)
124 KOG3866 DNA-binding protein of 83.3 2.5 5.4E-05 37.2 5.0 21 171-191 302-322 (442)
125 PF08726 EFhand_Ca_insen: Ca2+ 82.6 1.3 2.8E-05 29.9 2.5 30 18-49 3-32 (69)
126 cd07316 terB_like_DjlA N-termi 79.8 16 0.00035 26.7 8.0 76 280-359 11-86 (106)
127 PLN02952 phosphoinositide phos 79.5 11 0.00023 37.3 8.4 52 89-141 13-68 (599)
128 PF11116 DUF2624: Protein of u 77.2 17 0.00037 25.7 6.6 50 284-334 14-63 (85)
129 KOG2243 Ca2+ release channel ( 76.1 4.4 9.4E-05 43.0 4.8 55 201-261 4061-4117(5019)
130 PF09069 EF-hand_3: EF-hand; 74.9 25 0.00054 25.2 7.2 63 271-335 5-77 (90)
131 KOG1265 Phospholipase C [Lipid 73.2 69 0.0015 33.0 12.0 126 206-335 157-301 (1189)
132 PF14513 DAG_kinase_N: Diacylg 72.8 21 0.00046 27.9 7.0 38 280-317 44-81 (138)
133 KOG4347 GTPase-activating prot 72.4 8.1 0.00018 37.8 5.4 22 197-219 591-612 (671)
134 PF12174 RST: RCD1-SRO-TAF4 (R 72.2 9.8 0.00021 25.8 4.4 20 280-299 37-56 (70)
135 KOG3866 DNA-binding protein of 70.0 26 0.00056 31.1 7.5 26 167-192 246-271 (442)
136 KOG0035 Ca2+-binding actin-bun 70.0 13 0.00028 38.1 6.5 67 268-335 746-818 (890)
137 KOG0042 Glycerol-3-phosphate d 68.5 10 0.00022 36.7 5.0 65 270-335 594-659 (680)
138 KOG0035 Ca2+-binding actin-bun 67.8 9.5 0.00021 39.0 5.1 97 20-134 749-848 (890)
139 PF05819 NolX: NolX protein; 67.6 73 0.0016 30.4 10.3 25 199-224 370-394 (624)
140 PF00404 Dockerin_1: Dockerin 67.6 8.6 0.00019 19.3 2.5 15 86-100 1-15 (21)
141 PRK09430 djlA Dna-J like membr 66.9 32 0.0007 30.3 7.8 75 280-359 67-142 (267)
142 KOG1954 Endocytosis/signaling 63.3 13 0.00028 34.2 4.5 56 271-329 446-501 (532)
143 PF12174 RST: RCD1-SRO-TAF4 (R 63.0 24 0.00052 24.0 4.8 49 282-334 6-54 (70)
144 PF07308 DUF1456: Protein of u 58.8 41 0.00089 22.7 5.4 45 285-330 14-58 (68)
145 PLN02228 Phosphoinositide phos 58.6 55 0.0012 32.2 8.3 64 271-335 26-94 (567)
146 KOG0998 Synaptic vesicle prote 58.6 5.3 0.00011 41.4 1.5 64 79-142 286-349 (847)
147 KOG4004 Matricellular protein 57.4 5.2 0.00011 32.9 1.0 59 25-103 191-249 (259)
148 PF05099 TerB: Tellurite resis 57.3 8.9 0.00019 29.8 2.4 56 280-335 35-91 (140)
149 KOG0039 Ferric reductase, NADH 57.3 26 0.00056 35.3 6.1 48 89-141 1-48 (646)
150 PLN02222 phosphoinositide phos 53.3 55 0.0012 32.4 7.3 65 270-335 26-92 (581)
151 PF08461 HTH_12: Ribonuclease 52.5 31 0.00068 23.0 4.0 38 280-318 9-46 (66)
152 PF09068 EF-hand_2: EF hand; 51.8 1.1E+02 0.0024 23.6 8.2 51 91-141 13-74 (127)
153 PF01320 Colicin_Pyocin: Colic 49.5 37 0.0008 24.0 4.1 58 285-342 10-82 (85)
154 KOG4004 Matricellular protein 49.0 5.8 0.00013 32.6 0.1 53 84-136 195-248 (259)
155 KOG0042 Glycerol-3-phosphate d 46.4 53 0.0012 32.0 5.8 61 79-139 596-658 (680)
156 PLN02230 phosphoinositide phos 46.0 92 0.002 31.0 7.6 65 270-334 30-103 (598)
157 COG4103 Uncharacterized protei 44.5 92 0.002 24.4 5.9 56 280-335 40-96 (148)
158 PF01023 S_100: S-100/ICaBP ty 43.4 54 0.0012 19.9 3.7 29 268-296 5-36 (44)
159 PRK00523 hypothetical protein; 42.3 95 0.0021 21.1 5.0 39 275-314 30-68 (72)
160 PLN02223 phosphoinositide phos 41.7 1.1E+02 0.0023 30.0 7.2 66 270-335 17-94 (537)
161 PF03672 UPF0154: Uncharacteri 41.4 1.1E+02 0.0023 20.4 5.0 34 280-314 27-60 (64)
162 PF12419 DUF3670: SNF2 Helicas 40.7 53 0.0012 25.7 4.3 51 280-330 79-138 (141)
163 PF02761 Cbl_N2: CBL proto-onc 40.4 62 0.0013 22.9 4.0 50 281-331 19-68 (85)
164 PF08976 DUF1880: Domain of un 38.1 11 0.00024 28.2 0.1 25 79-103 10-34 (118)
165 KOG1264 Phospholipase C [Lipid 38.1 1.7E+02 0.0037 30.1 8.0 142 199-344 146-304 (1267)
166 KOG1954 Endocytosis/signaling 37.8 53 0.0011 30.4 4.3 49 91-139 458-506 (532)
167 PF11020 DUF2610: Domain of un 37.1 56 0.0012 22.6 3.3 41 292-332 36-76 (82)
168 COG3763 Uncharacterized protei 36.4 1.4E+02 0.0029 20.2 5.1 35 280-315 34-68 (71)
169 PF07862 Nif11: Nitrogen fixat 36.0 1E+02 0.0023 18.8 5.2 21 286-307 28-48 (49)
170 PRK01844 hypothetical protein; 35.4 1.4E+02 0.0031 20.3 5.0 39 275-314 29-67 (72)
171 PF02761 Cbl_N2: CBL proto-onc 35.3 1.3E+02 0.0028 21.3 5.0 62 79-141 10-73 (85)
172 KOG4286 Dystrophin-like protei 35.1 78 0.0017 31.9 5.2 165 7-192 405-579 (966)
173 KOG1265 Phospholipase C [Lipid 33.8 77 0.0017 32.7 5.0 82 10-103 213-298 (1189)
174 PF14513 DAG_kinase_N: Diacylg 31.4 63 0.0014 25.3 3.3 51 91-141 6-63 (138)
175 smart00288 VHS Domain present 30.3 74 0.0016 24.6 3.6 45 293-337 4-48 (133)
176 PF08414 NADPH_Ox: Respiratory 29.5 1.5E+02 0.0032 21.7 4.6 25 198-224 31-55 (100)
177 TIGR00135 gatC glutamyl-tRNA(G 29.5 1E+02 0.0022 22.0 4.0 30 285-315 1-30 (93)
178 TIGR01639 P_fal_TIGR01639 Plas 28.0 1.4E+02 0.003 19.5 4.0 35 280-315 5-39 (61)
179 KOG4070 Putative signal transd 27.5 1.4E+02 0.0031 23.6 4.5 73 18-105 12-86 (180)
180 PF03979 Sigma70_r1_1: Sigma-7 26.9 92 0.002 21.7 3.3 36 280-318 17-52 (82)
181 PF09069 EF-hand_3: EF-hand; 26.7 2.4E+02 0.0053 20.2 6.7 57 79-138 6-75 (90)
182 PF09373 PMBR: Pseudomurein-bi 26.6 64 0.0014 18.1 1.9 18 318-335 1-18 (33)
183 COG5562 Phage envelope protein 25.6 54 0.0012 25.3 1.9 26 309-334 76-101 (137)
184 TIGR01848 PHA_reg_PhaR polyhyd 25.5 1.8E+02 0.004 21.5 4.6 59 278-336 12-80 (107)
185 PRK00034 gatC aspartyl/glutamy 25.3 1.4E+02 0.003 21.4 4.1 31 284-315 2-32 (95)
186 PF09068 EF-hand_2: EF hand; 24.3 77 0.0017 24.4 2.7 65 36-105 57-126 (127)
187 COG4359 Uncharacterized conser 24.0 4.3E+02 0.0092 22.0 7.1 29 209-237 9-37 (220)
188 PF12631 GTPase_Cys_C: Catalyt 24.0 1.8E+02 0.0039 19.7 4.2 29 286-314 41-72 (73)
189 PF10437 Lip_prot_lig_C: Bacte 23.5 1.4E+02 0.0031 20.8 3.8 43 286-331 43-86 (86)
190 KOG4403 Cell surface glycoprot 23.0 3.7E+02 0.0081 25.4 7.0 52 88-139 40-97 (575)
191 PHA02335 hypothetical protein 22.7 1.8E+02 0.0039 21.4 4.0 34 177-212 20-53 (118)
192 cd03569 VHS_Hrs_Vps27p VHS dom 22.6 1.8E+02 0.004 22.8 4.6 48 290-337 5-52 (142)
193 PF13592 HTH_33: Winged helix- 21.6 1.9E+02 0.004 18.7 3.8 35 282-316 2-36 (60)
194 cd03565 VHS_Tom1 VHS domain fa 21.3 2.1E+02 0.0045 22.4 4.7 63 294-356 6-70 (141)
195 TIGR03573 WbuX N-acetyl sugar 20.9 2.4E+02 0.0052 25.9 5.6 45 280-331 298-342 (343)
196 PLN02228 Phosphoinositide phos 20.5 3.5E+02 0.0077 26.8 6.9 60 77-138 25-92 (567)
197 cd07176 terB tellurite resista 20.5 1.5E+02 0.0033 21.5 3.6 17 280-296 14-30 (111)
198 COG0721 GatC Asp-tRNAAsn/Glu-t 20.2 2.1E+02 0.0045 20.8 4.0 31 284-315 2-32 (96)
No 1
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-52 Score=361.02 Aligned_cols=358 Identities=37% Similarity=0.625 Sum_probs=309.1
Q ss_pred CcchhhHHhhhhhhhcCCChHHHHHhhhcccc----CCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccC
Q 042758 1 SYRRRVFFNYEKRIRMQSPPEKVFEYFASFRT----PGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLC 76 (364)
Q Consensus 1 ~~~~~~~~~~e~~~r~~~~~~~~f~~f~~~~~----~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 76 (364)
+||++++|+||+|||.+++|+++|++|+++.. ..+..+|||+||.++|.+..|+.+..-++.-..-.+..+.++..
T Consensus 120 ~~r~r~~~~yE~rlr~~s~P~kiFryFAtvk~~~~~~~~evyMTP~DFlrSi~p~~~qpe~~gld~~k~~~~~~~~~~~~ 199 (489)
T KOG2643|consen 120 GFRERKIMEYENRLRLYSTPDKIFRYFATVKYKNDSGKGEVYMTPEDFLRSITPGAKQPERLGLDKLKDIDEKLKKELPK 199 (489)
T ss_pred chhhhHhhhhhhhhhhcCCHHHHHHHhheeeeeccCCCceEEeCHHHHHHhcCCCCCCchhhhhHHHhhhchhccccCcc
Confidence 58999999999999999999999999999972 35889999999999999998887543332222222233333433
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccC
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVG 156 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~ 156 (364)
.+..-.-.++.+.+|.|||.||+-++..|+.|+..++.+|++||.||+|.|+.+||..+...+..+...+..|+++...+
T Consensus 200 ~~~~~siF~~lg~~GLIsfSdYiFLlTlLS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~ 279 (489)
T KOG2643|consen 200 FSDGDSIFYKLGESGLISFSDYIFLLTLLSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTG 279 (489)
T ss_pred CCCCCeeEEEcCCCCeeeHHHHHHHHHHHccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCcccc
Confidence 33443445678899999999999999999999999999999999999999999999999998888888888888776665
Q ss_pred CCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHHHHHHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc--ChHHHHH
Q 042758 157 FKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDLHEEILQLEFAHYDCKLRGTISAKDFALSLVASA--DLSQVNK 234 (364)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~--~~~~~~~ 234 (364)
..... .-...+..++|+.++++++++++|.+++.+++.+++...|..+|+..+|.|+..+|..+|..+. +......
T Consensus 280 ~s~~~--~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~ 357 (489)
T KOG2643|consen 280 NSFKV--EVNSALLTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHK 357 (489)
T ss_pred ceehh--hhhhhHHHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHH
Confidence 55432 3345577888999999999999999999999999999999999999999999999999998876 5555667
Q ss_pred HHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q 042758 235 LLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314 (364)
Q Consensus 235 l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~ 314 (364)
+++++...... .+..||+++|..|+.++.++..+..|+..|-..++.|+..+|++++..++|+.||+..++-+|..|
T Consensus 358 ~lkrvk~kf~~---~~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IF 434 (489)
T KOG2643|consen 358 YLKRVKEKFKD---DGKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIF 434 (489)
T ss_pred HHHHHHHhccC---CCCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEE
Confidence 88888775331 367999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHHHHhcccC-CCCCCchhHHHHHHHHHHhhhhccCC
Q 042758 315 DTNRDGSISPDEFVRVLQRRERD-TARPREPGFKGLITCWKNCATATKCS 363 (364)
Q Consensus 315 D~d~dg~Is~~EF~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
|.|+||.||++||+.+|++|++. ++.|...+..+-|+|+|||+++++..
T Consensus 435 D~N~Dg~LS~~EFl~Vmk~Rmhrgl~~p~~~gl~~~~~~v~kc~k~~~~a 484 (489)
T KOG2643|consen 435 DENNDGTLSHKEFLAVMKRRMHRGLELPKDTGLLRYMKAVKKCIKEVSSA 484 (489)
T ss_pred ccCCCCcccHHHHHHHHHHHhhccccCCcccchHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999977 89999999999999999999887754
No 2
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=99.87 E-value=1e-20 Score=168.54 Aligned_cols=276 Identities=23% Similarity=0.364 Sum_probs=226.3
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYI 99 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~ 99 (364)
.+.+|..|++.+. +|.-+|++++|.+....++..++.+. . .++-+-...|..+||.|||+||+
T Consensus 35 Lr~if~~~as~e~-~ge~~mt~edFv~~ylgL~~e~~~n~------------~----~v~Lla~iaD~tKDglisf~eF~ 97 (694)
T KOG0751|consen 35 LRSIFLKYASIEK-NGESYMTPEDFVRRYLGLYNESNFND------------K----IVRLLASIADQTKDGLISFQEFR 97 (694)
T ss_pred HHHHHHHHhHHhh-ccccccCHHHHHHHHHhhcccccCCh------------H----HHHHHHhhhhhcccccccHHHHH
Confidence 4457899999988 99999999999999887776655322 1 22444557788999999999999
Q ss_pred HHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCC
Q 042758 100 LFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQ 179 (364)
Q Consensus 100 ~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d 179 (364)
.+-..++.++.....+|+.||..++|.+|.+++..++.....+. +.+++ ..++.+...|..+..
T Consensus 98 afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~----------~~~f~------~d~efI~~~Fg~~~~ 161 (694)
T KOG0751|consen 98 AFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHH----------HIPFN------WDSEFIKLHFGDIRK 161 (694)
T ss_pred HHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhcccccc----------CCCcc------CCcchHHHHhhhHHH
Confidence 99988999999999999999999999999999999997653321 12333 567888889999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHH
Q 042758 180 TCLRHERFVQFLRDLHEEILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYK 256 (364)
Q Consensus 180 g~is~~eF~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~ 256 (364)
..++|.+|.+++..++.+...++|+..|+.++|.||.-+|+.++.... ....++..+-.+... .....+|+.
T Consensus 162 r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg-----~~~H~vSf~ 236 (694)
T KOG0751|consen 162 RHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGG-----NDSHQVSFS 236 (694)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCC-----CCccccchH
Confidence 999999999999999999999999999999999999999999887532 233333333333221 156799999
Q ss_pred HHHHHHHHHHhhHHHHHHHhhhc--ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCC-CCCCcCHHHHHHHHHh
Q 042758 257 EFKDFAELRKQLQFLSLAIFTYG--KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTN-RDGSISPDEFVRVLQR 333 (364)
Q Consensus 257 ~F~~~~~~~~~~~~~~~a~~~~d--~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d-~dg~Is~~EF~~~l~~ 333 (364)
.|..+..++.+|+.+++.+..+. ..+-.|+++++..+... .+ ..|+.+++.+|...|.. ..|.++++++.++...
T Consensus 237 yf~afnslL~~melirk~y~s~~~~~~d~~~~kdq~~~~a~~-~~-q~t~~~idilf~la~~~~~~~~ltl~Di~~I~p~ 314 (694)
T KOG0751|consen 237 YFNAFNSLLNNMELIRKIYSSLAGTRKDVEVTKDQFSLAAQT-SK-QVTPLEIDILFQLADLYHPMGRLTLADIERIAPL 314 (694)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhcccccchhhhHHHHHHHHHH-hh-ccCchhhhhhhhhhhcccccccccHHHHHhhCCh
Confidence 99999999999999999999876 66778999999988776 43 58999999999999875 6889999999988776
Q ss_pred cc
Q 042758 334 RE 335 (364)
Q Consensus 334 ~~ 335 (364)
..
T Consensus 315 ~~ 316 (694)
T KOG0751|consen 315 NY 316 (694)
T ss_pred hh
Confidence 64
No 3
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.78 E-value=1.1e-17 Score=131.57 Aligned_cols=131 Identities=20% Similarity=0.375 Sum_probs=114.7
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH----hhH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRK----QLQ 269 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~----~~~ 269 (364)
+.++.+|..+|++++|.|+..++..++..++ +...+..++..++. +.+.|+|.+|..+..... .-+
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-------~~~~idf~~Fl~~ms~~~~~~~~~E 92 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-------GNETVDFPEFLTVMSVKLKRGDKEE 92 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-------CCCccCHHHHHHHHHHHhccCCcHH
Confidence 4688899999999999999999999998665 55667777766654 468999999999877554 245
Q ss_pred HHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 270 FLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 270 ~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
.+..||+.|| +++|+|+..|++.++.. +|..+++++++.+++.+|.|+||.|+|++|++.+....
T Consensus 93 el~~aF~~fD~d~dG~Is~~eL~~vl~~-lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~ 158 (160)
T COG5126 93 ELREAFKLFDKDHDGYISIGELRRVLKS-LGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP 158 (160)
T ss_pred HHHHHHHHhCCCCCceecHHHHHHHHHh-hcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence 6999999999 99999999999999999 99999999999999999999999999999999887543
No 4
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.77 E-value=1.8e-17 Score=133.34 Aligned_cols=130 Identities=19% Similarity=0.321 Sum_probs=117.5
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH-------
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRK------- 266 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~------- 266 (364)
..++.+|..+|.+++|.|+..|+..++..++ +..++..++..++.. ++|.|++.+|..+.....
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~d------g~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLD------GDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHhhhccccccc
Confidence 4578899999999999999999999998765 678888999999887 899999999999766442
Q ss_pred -hhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 267 -QLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 267 -~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
....+..||+.|| +++|+||..||+.++.. +|.++++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~-lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTS-LGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHH-hCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 2347999999999 99999999999999999 999999999999999999999999999999999875
No 5
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.74 E-value=5.3e-17 Score=131.46 Aligned_cols=160 Identities=19% Similarity=0.333 Sum_probs=133.2
Q ss_pred HHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHH
Q 042758 21 EKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYIL 100 (364)
Q Consensus 21 ~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~ 100 (364)
-++..+|.++|+ ++.|+|+..|+++++...- .++--++ .++.|+..||.+.+|+|.+.||..
T Consensus 57 ~~~~~~f~~vD~-d~sg~i~~~eLq~aLsn~~----------------~~~Fs~~-TcrlmI~mfd~~~~G~i~f~EF~~ 118 (221)
T KOG0037|consen 57 PQLAGWFQSVDR-DRSGRILAKELQQALSNGT----------------WSPFSIE-TCRLMISMFDRDNSGTIGFKEFKA 118 (221)
T ss_pred HHHHHHHHhhCc-cccccccHHHHHHHhhcCC----------------CCCCCHH-HHHHHHHHhcCCCCCccCHHHHHH
Confidence 367778888887 9999999999999986321 1111111 568999999999999999999999
Q ss_pred HHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCc
Q 042758 101 FVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQT 180 (364)
Q Consensus 101 ~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg 180 (364)
+|..+ ..|+.+|+.+|.|++|.|+..||+.+|..+ |..++. ...+++.+.+|.-+.|
T Consensus 119 Lw~~i----~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~----------------Gy~Lsp---q~~~~lv~kyd~~~~g 175 (221)
T KOG0037|consen 119 LWKYI----NQWRNVFRTYDRDRSGTIDSSELRQALTQL----------------GYRLSP---QFYNLLVRKYDRFGGG 175 (221)
T ss_pred HHHHH----HHHHHHHHhcccCCCCcccHHHHHHHHHHc----------------CcCCCH---HHHHHHHHHhccccCC
Confidence 99988 899999999999999999999999999988 455544 6788888889988899
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc--CHHHHHHHH
Q 042758 181 CLRHERFVQFLRDLHEEILQLEFAHYDCKLRGTI--SAKDFALSL 223 (364)
Q Consensus 181 ~is~~eF~~~~~~~~~~~~~~~F~~~D~~~~G~i--~~~ef~~~l 223 (364)
.|.|++|++++..++ .+..+|+.+|++..|.| ++++|..+.
T Consensus 176 ~i~FD~FI~ccv~L~--~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 176 RIDFDDFIQCCVVLQ--RLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ceeHHHHHHHHHHHH--HHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 999999999999886 78899999999999855 567765543
No 6
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.74 E-value=1.8e-17 Score=133.32 Aligned_cols=132 Identities=23% Similarity=0.374 Sum_probs=105.5
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYI 99 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~ 99 (364)
..++|..|+. +|+|+|+..||..++. .+|..++..++ ..++..+|.+++|.|++.||+
T Consensus 10 l~~~F~~fD~----d~~G~i~~~el~~~lr--------------~lg~~~t~~el----~~~~~~~D~dg~g~I~~~eF~ 67 (151)
T KOG0027|consen 10 LKEAFQLFDK----DGDGKISVEELGAVLR--------------SLGQNPTEEEL----RDLIKEIDLDGDGTIDFEEFL 67 (151)
T ss_pred HHHHHHHHCC----CCCCcccHHHHHHHHH--------------HcCCCCCHHHH----HHHHHHhCCCCCCeEcHHHHH
Confidence 4566777775 9999999999999885 45555666655 799999999999999999999
Q ss_pred HHHHHhC---C----ChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhh
Q 042758 100 LFVTLLS---I----PESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEY 172 (364)
Q Consensus 100 ~~~~~l~---~----~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (364)
.++.... . ..++++.+|+.+|.|++|+||..||+.++..++.. .+ ...+..+..
T Consensus 68 ~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~----------------~~---~~e~~~mi~ 128 (151)
T KOG0027|consen 68 DLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK----------------LT---DEECKEMIR 128 (151)
T ss_pred HHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc----------------CC---HHHHHHHHH
Confidence 9988751 2 24599999999999999999999999999988552 22 355666667
Q ss_pred hcCCCCCccccHHHHHHHHH
Q 042758 173 FFGKDGQTCLRHERFVQFLR 192 (364)
Q Consensus 173 ~~d~~~dg~is~~eF~~~~~ 192 (364)
.+|.|+||.|+|++|+.++.
T Consensus 129 ~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 129 EVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred hcCCCCCCeEeHHHHHHHHh
Confidence 77777777777777776654
No 7
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.71 E-value=7.2e-16 Score=124.95 Aligned_cols=128 Identities=19% Similarity=0.290 Sum_probs=107.4
Q ss_pred hhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHH
Q 042758 110 SSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189 (364)
Q Consensus 110 ~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~ 189 (364)
..+...|...|.|++|.|+.+|+..+|..... .++ ..+.|.+|..++|.+.+|+|.+.||..
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~-------------~~F-----s~~TcrlmI~mfd~~~~G~i~f~EF~~ 118 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTW-------------SPF-----SIETCRLMISMFDRDNSGTIGFKEFKA 118 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCC-------------CCC-----CHHHHHHHHHHhcCCCCCccCHHHHHH
Confidence 46667899999999999999999999964422 133 357899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHH
Q 042758 190 FLRDLHEEILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAE 263 (364)
Q Consensus 190 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~ 263 (364)
+|..++ .|+.+|+.+|.|++|.|+..|++++|...+ +++-.+.++++++.. ..+.|.|++|..++.
T Consensus 119 Lw~~i~--~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~------~~g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 119 LWKYIN--QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRF------GGGRIDFDDFIQCCV 187 (221)
T ss_pred HHHHHH--HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccc------cCCceeHHHHHHHHH
Confidence 999886 899999999999999999999999999865 777777888877764 466777777776665
No 8
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.71 E-value=6.4e-17 Score=127.29 Aligned_cols=128 Identities=22% Similarity=0.386 Sum_probs=96.0
Q ss_pred HHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHHH
Q 042758 22 KVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILF 101 (364)
Q Consensus 22 ~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~ 101 (364)
+.|..|+ . +++|.|+..+|...++ ++|..++..+ +..+|..+|. |.|.|+|.+|+.+
T Consensus 24 eaF~l~D---~-d~~G~I~~~el~~ilr--------------~lg~~~s~~e----i~~l~~~~d~-~~~~idf~~Fl~~ 80 (160)
T COG5126 24 EAFQLFD---R-DSDGLIDRNELGKILR--------------SLGFNPSEAE----INKLFEEIDA-GNETVDFPEFLTV 80 (160)
T ss_pred HHHHHhC---c-CCCCCCcHHHHHHHHH--------------HcCCCCcHHH----HHHHHHhccC-CCCccCHHHHHHH
Confidence 4455555 3 9999999999998874 3344455554 4899999999 9999999999999
Q ss_pred HHHh---CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCC
Q 042758 102 VTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDG 178 (364)
Q Consensus 102 ~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 178 (364)
+... ..+.++++.+|+.||.|++|+|+..++..++..++. ..+ .+..+.+...+|.++
T Consensus 81 ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge----------------~~~---deev~~ll~~~d~d~ 141 (160)
T COG5126 81 MSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGE----------------RLS---DEEVEKLLKEYDEDG 141 (160)
T ss_pred HHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc----------------cCC---HHHHHHHHHhcCCCC
Confidence 9875 567899999999999999999999999999987744 222 234444455555555
Q ss_pred CccccHHHHHHHH
Q 042758 179 QTCLRHERFVQFL 191 (364)
Q Consensus 179 dg~is~~eF~~~~ 191 (364)
+|.|+|++|.+.+
T Consensus 142 dG~i~~~eF~~~~ 154 (160)
T COG5126 142 DGEIDYEEFKKLI 154 (160)
T ss_pred CceEeHHHHHHHH
Confidence 5555555555543
No 9
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=9.2e-17 Score=137.50 Aligned_cols=224 Identities=15% Similarity=0.142 Sum_probs=152.6
Q ss_pred cCCCcccCChhHHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhc
Q 042758 69 RVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQA 146 (364)
Q Consensus 69 ~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~ 146 (364)
+++.+.+..+..++..+|.++||.|+-.|...++... .....+....|..+|.|.+|.|+.+|............ .
T Consensus 70 l~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~--~ 147 (325)
T KOG4223|consen 70 LTPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLP--D 147 (325)
T ss_pred hCcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCc--c
Confidence 4444555566899999999999999999999988654 23345667788899999999999999998886542200 0
Q ss_pred cccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHH-----HHHHHHHHHHHhcccCCCCCccCHHHHHH
Q 042758 147 ARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLR-----DLHEEILQLEFAHYDCKLRGTISAKDFAL 221 (364)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~-----~~~~~~~~~~F~~~D~~~~G~i~~~ef~~ 221 (364)
...... .+..... .....+..++.+|.|++|.+|.+||..++. .+..-+++....-.|+|++|+|+.+||..
T Consensus 148 ~~~d~e--~~~~~~k-m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfig 224 (325)
T KOG4223|consen 148 EFPDEE--DNEEYKK-MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIG 224 (325)
T ss_pred ccccch--hcHHHHH-HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHh
Confidence 000000 0000000 112233445567888888899998888884 23333566677778888888888888877
Q ss_pred HHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCC
Q 042758 222 SLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGI 300 (364)
Q Consensus 222 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~ 300 (364)
-+........-...+ .. .-.+.+..+| +++|+++.+|++..+.. .+.
T Consensus 225 d~~~~~~~~~epeWv---------------~~----------------Ere~F~~~~DknkDG~L~~dEl~~WI~P-~~~ 272 (325)
T KOG4223|consen 225 DLYSHEGNEEEPEWV---------------LT----------------EREQFFEFRDKNKDGKLDGDELLDWILP-SEQ 272 (325)
T ss_pred HHhhccCCCCCcccc---------------cc----------------cHHHHHHHhhcCCCCccCHHHHhcccCC-CCc
Confidence 665432100000000 00 0112233344 99999999999999888 788
Q ss_pred CCCHHHHHHHHHhhcCCCCCCcCHHHHHH
Q 042758 301 SISDNVVDVIFHVFDTNRDGSISPDEFVR 329 (364)
Q Consensus 301 ~ls~~e~~~lf~~~D~d~dg~Is~~EF~~ 329 (364)
.....|+.+|+...|.|+||++|++|.+.
T Consensus 273 d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 273 DHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred cHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 89999999999999999999999999875
No 10
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.70 E-value=9.5e-17 Score=130.89 Aligned_cols=112 Identities=21% Similarity=0.448 Sum_probs=97.3
Q ss_pred hcCCChHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccC
Q 042758 15 RMQSPPEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLIS 94 (364)
Q Consensus 15 r~~~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~ 94 (364)
.+..+.+++-.||..+...-..|.|+.++|...+...+|.+.... .+..+|+.+|.|+||.|+
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~-----------------y~~~vF~~fD~~~dg~i~ 82 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASK-----------------YAELVFRTFDKNKDGTID 82 (193)
T ss_pred hcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHH-----------------HHHHHHHHhcccCCCCcC
Confidence 466788999999998877345677899999999999999766443 568999999999999999
Q ss_pred HHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhh
Q 042758 95 FPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSEN 143 (364)
Q Consensus 95 ~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~ 143 (364)
|.||+.+++.+ +..++.++++|+.+|.|++|+|+.+|+..++..+....
T Consensus 83 F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~ 133 (193)
T KOG0044|consen 83 FLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMT 133 (193)
T ss_pred HHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHc
Confidence 99999999886 67789999999999999999999999999999887653
No 11
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.4e-15 Score=116.65 Aligned_cols=132 Identities=20% Similarity=0.441 Sum_probs=116.6
Q ss_pred HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHH----HHh
Q 042758 195 HEEILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAEL----RKQ 267 (364)
Q Consensus 195 ~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~----~~~ 267 (364)
+...++.+|..+|++++|+|+.+|+...+.+.+ ...++..++..++.. +.|.|+|++|...... ...
T Consensus 31 q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~------~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 31 QKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKE------GSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred HHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhc------cCceechHHHHHHHHHHHhccCc
Confidence 334678889999999999999999998888875 557778888888887 8899999999987442 234
Q ss_pred hHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 268 LQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 268 ~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
.+.+..+|+.+| +.+|.||+.+|+.++.. +|..++++++..++..+|.|+||.|+-+||+.+|+.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvake-LgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKE-LGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHH-hCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 567999999999 99999999999999999 999999999999999999999999999999999875
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.66 E-value=4.2e-15 Score=119.66 Aligned_cols=131 Identities=19% Similarity=0.352 Sum_probs=103.5
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHH----HhhH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELR----KQLQ 269 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~----~~~~ 269 (364)
+.+...|..+|.+++|.|+..||..++.... ....+..++..++.+ ++|.|+|++|..+.... ..-.
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l~~~~~~~~~~~ 84 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD------GNGTIDFPEFLTLMARKMKDTDSEE 84 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHHHHhccCCcHHH
Confidence 3456677888888888888888887776432 344566677666655 67788888887765432 1223
Q ss_pred HHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 270 FLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 270 ~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
.+..+|+.+| +++|.|+.+||..++.. .|..++..++..+++.+|.+++|.|+|+||+.++..+
T Consensus 85 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 149 (149)
T PTZ00184 85 EIKEAFKVFDRDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149 (149)
T ss_pred HHHHHHHhhCCCCCCeEeHHHHHHHHHH-HCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhcC
Confidence 5778899999 99999999999999998 7989999999999999999999999999999988653
No 13
>PTZ00183 centrin; Provisional
Probab=99.64 E-value=1.1e-14 Score=118.50 Aligned_cols=129 Identities=22% Similarity=0.404 Sum_probs=101.2
Q ss_pred HHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH----hhHH
Q 042758 198 ILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRK----QLQF 270 (364)
Q Consensus 198 ~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~----~~~~ 270 (364)
.+..+|..+|++++|.|+..||..++...+ +...+..++..++.+ ++|.|+|.+|........ .-..
T Consensus 18 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~------~~g~i~~~eF~~~~~~~~~~~~~~~~ 91 (158)
T PTZ00183 18 EIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKD------GSGKIDFEEFLDIMTKKLGERDPREE 91 (158)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHHHhcCCCcHHH
Confidence 456667777777777777777777776533 444566666666655 677777777776544321 1245
Q ss_pred HHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 271 LSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 271 ~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
+..+|+.+| +++|.|+..||..++.. +|..+++.++..+|..+|.|++|.|+|+||+.++..
T Consensus 92 l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 92 ILKAFRLFDDDKTGKISLKNLKRVAKE-LGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 778888888 99999999999999998 899999999999999999999999999999999876
No 14
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.55 E-value=1.4e-14 Score=124.33 Aligned_cols=199 Identities=16% Similarity=0.162 Sum_probs=140.2
Q ss_pred hHHhhhhhhhcCCChHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHH
Q 042758 6 VFFNYEKRIRMQSPPEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLF 85 (364)
Q Consensus 6 ~~~~~e~~~r~~~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~ 85 (364)
..+.|+..++...+-+++-..+..++. +++|+|+..|+..|+...+ ...+...+.+-+..+
T Consensus 62 e~~~~fd~l~~ee~~~rl~~l~~~iD~-~~Dgfv~~~El~~wi~~s~------------------k~~v~~~~~~~~~~~ 122 (325)
T KOG4223|consen 62 EFADEFDQLTPEESQERLGKLVPKIDS-DSDGFVTESELKAWIMQSQ------------------KKYVVEEAARRWDEY 122 (325)
T ss_pred hhhhhhhhhCcchhHHHHHHHHhhhcC-CCCCceeHHHHHHHHHHHH------------------HHHHHHHHHHHHHHh
Confidence 456777788888888888888888886 9999999999999986311 111222446778889
Q ss_pred cCCCCcccCHHHHHHHHHHhC---------C-------ChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhcccc
Q 042758 86 DTNNDGLISFPEYILFVTLLS---------I-------PESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARH 149 (364)
Q Consensus 86 D~d~dG~I~~~Ef~~~~~~l~---------~-------~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~ 149 (364)
|.|.||.|+|+|+........ . ....-+.-|+..|.|++|.++.+||..+|.---.
T Consensus 123 d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~-------- 194 (325)
T KOG4223|consen 123 DKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEH-------- 194 (325)
T ss_pred ccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhc--------
Confidence 999999999999998765320 0 0123466799999999999999999999842110
Q ss_pred ccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHHHHH---------HHHHHHHHhcccCCCCCccCHHHHH
Q 042758 150 RDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDLH---------EEILQLEFAHYDCKLRGTISAKDFA 220 (364)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~~~~---------~~~~~~~F~~~D~~~~G~i~~~ef~ 220 (364)
.-+ ....+..-..-.|+|+||.|+++||+.-+-... ...-...+..+|.|++|+++.+|++
T Consensus 195 -----p~M-----~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~ 264 (325)
T KOG4223|consen 195 -----PHM-----KDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELL 264 (325)
T ss_pred -----chH-----HHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHh
Confidence 000 012233334457999999999999998653211 1123466778999999999999999
Q ss_pred HHHHHhc---ChHHHHHHHHHHHh
Q 042758 221 LSLVASA---DLSQVNKLLDRVDE 241 (364)
Q Consensus 221 ~~l~~~~---~~~~~~~l~~~~~~ 241 (364)
.|+.... ...+...++...+.
T Consensus 265 ~WI~P~~~d~A~~EA~hL~~eaD~ 288 (325)
T KOG4223|consen 265 DWILPSEQDHAKAEARHLLHEADE 288 (325)
T ss_pred cccCCCCccHHHHHHHHHhhhhcc
Confidence 9987543 33455566654444
No 15
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=5.9e-14 Score=107.82 Aligned_cols=132 Identities=21% Similarity=0.310 Sum_probs=105.9
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYI 99 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~ 99 (364)
+++.|..|+. ++.|+|..+||.-++ +++|.++..+++ ..+...+|.+|.|.|+|++|+
T Consensus 35 i~e~f~lfd~----~~~g~iD~~EL~vAm--------------ralGFE~~k~ei----~kll~d~dk~~~g~i~fe~f~ 92 (172)
T KOG0028|consen 35 IKEAFELFDP----DMAGKIDVEELKVAM--------------RALGFEPKKEEI----LKLLADVDKEGSGKITFEDFR 92 (172)
T ss_pred HHHHHHhhcc----CCCCcccHHHHHHHH--------------HHcCCCcchHHH----HHHHHhhhhccCceechHHHH
Confidence 5566777773 999999999996655 355666666655 689999999999999999999
Q ss_pred HHHHHh---CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCC
Q 042758 100 LFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGK 176 (364)
Q Consensus 100 ~~~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 176 (364)
..++.. ..+.++++.+|+.+|.|++|.|++.+|+.+...++. ++++ +....+...+|.
T Consensus 93 ~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLge----------------nltD---~El~eMIeEAd~ 153 (172)
T KOG0028|consen 93 RVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGE----------------NLTD---EELMEMIEEADR 153 (172)
T ss_pred HHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCc----------------cccH---HHHHHHHHHhcc
Confidence 987653 568999999999999999999999999999998844 3332 445555667888
Q ss_pred CCCccccHHHHHHHHH
Q 042758 177 DGQTCLRHERFVQFLR 192 (364)
Q Consensus 177 ~~dg~is~~eF~~~~~ 192 (364)
+++|.|+-+||...+.
T Consensus 154 d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 154 DGDGEVNEEEFIRIMK 169 (172)
T ss_pred cccccccHHHHHHHHh
Confidence 8888888888887664
No 16
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.53 E-value=1.5e-13 Score=112.32 Aligned_cols=141 Identities=23% Similarity=0.459 Sum_probs=107.6
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcc-cCHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGL-ISFPEY 98 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~-I~~~Ef 98 (364)
.+.+...|.+++.+++.|+||.+||.........+ ...+++..+|.+++|. |+|.+|
T Consensus 32 I~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np----------------------~~~rI~~~f~~~~~~~~v~F~~F 89 (187)
T KOG0034|consen 32 IERLYERFKKLDRNNGDGYLTKEEFLSIPELALNP----------------------LADRIIDRFDTDGNGDPVDFEEF 89 (187)
T ss_pred HHHHHHHHHHhccccccCccCHHHHHHHHHHhcCc----------------------HHHHHHHHHhccCCCCccCHHHH
Confidence 44567777777773399999999999886322211 4479999999999998 999999
Q ss_pred HHHHHHh---CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcC
Q 042758 99 ILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFG 175 (364)
Q Consensus 99 ~~~~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 175 (364)
+.++... ....++++-+|+.+|.+++|.|+.+|+..++..+... ..+ .
T Consensus 90 v~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~---------------~~~----~---------- 140 (187)
T KOG0034|consen 90 VRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGE---------------NDD----M---------- 140 (187)
T ss_pred HHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHcc---------------CCc----c----------
Confidence 9999876 3444589999999999999999999999999988442 100 0
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHHhcccCCCCCccCHHHHHHHHHHh
Q 042758 176 KDGQTCLRHERFVQFLRDLHEEILQLEFAHYDCKLRGTISAKDFALSLVAS 226 (364)
Q Consensus 176 ~~~dg~is~~eF~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~ 226 (364)
.......++...|..+|.+++|.|+++||..++...
T Consensus 141 ---------------~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 141 ---------------SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred ---------------hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 011133456677888899999999999998888653
No 17
>PTZ00183 centrin; Provisional
Probab=99.52 E-value=1.1e-13 Score=112.68 Aligned_cols=88 Identities=23% Similarity=0.356 Sum_probs=63.1
Q ss_pred CCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHHHHHHh---CCChh
Q 042758 34 GGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL---SIPES 110 (364)
Q Consensus 34 ~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l---~~~~~ 110 (364)
+++|.|+..||..++... +..++.. .+..+|..+|.+++|.|+|.||..++... ..+..
T Consensus 29 ~~~G~i~~~e~~~~l~~~--------------g~~~~~~----~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 90 (158)
T PTZ00183 29 DGSGTIDPKELKVAMRSL--------------GFEPKKE----EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPRE 90 (158)
T ss_pred CCCCcccHHHHHHHHHHh--------------CCCCCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHH
Confidence 788888888888777532 1112222 34688888888888888888888776543 24456
Q ss_pred hHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 111 SFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 111 ~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
.++.+|+.+|.+++|.|+..||..++...
T Consensus 91 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 91 EILKAFRLFDDDKTGKISLKNLKRVAKEL 119 (158)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 78888888888888888888888888655
No 18
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.52 E-value=9.6e-13 Score=100.37 Aligned_cols=129 Identities=14% Similarity=0.227 Sum_probs=110.8
Q ss_pred HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHH-HHHhh--
Q 042758 195 HEEILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAE-LRKQL-- 268 (364)
Q Consensus 195 ~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~-~~~~~-- 268 (364)
|-..++.+|...|.|++|.|+.++++..+.+++ +.+++..|++. ..|.|+|.-|+...- .+...
T Consensus 30 QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----------a~gPINft~FLTmfGekL~gtdp 99 (171)
T KOG0031|consen 30 QIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----------APGPINFTVFLTMFGEKLNGTDP 99 (171)
T ss_pred HHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----------CCCCeeHHHHHHHHHHHhcCCCH
Confidence 334688999999999999999999999998876 66777787763 677899998887543 23222
Q ss_pred -HHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 269 -QFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 269 -~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+.|..||+.|| +++|.|..+.|+.+|.. .|..++++||+.+|+.+-.|..|.|+|.+|+.+|...
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt-~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG 166 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTT-MGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHG 166 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHH-hcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHcc
Confidence 34889999999 99999999999999999 8999999999999999999999999999999999843
No 19
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.51 E-value=4.4e-13 Score=109.57 Aligned_cols=131 Identities=22% Similarity=0.344 Sum_probs=104.0
Q ss_pred HHHHHHhcccCC-CCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCc-ccHHHHHHHHHHHHh---h-HHH
Q 042758 198 ILQLEFAHYDCK-LRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIR-ITYKEFKDFAELRKQ---L-QFL 271 (364)
Q Consensus 198 ~~~~~F~~~D~~-~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-i~~~~F~~~~~~~~~---~-~~~ 271 (364)
.+...|..+|.+ ++|.++.+||..+.. .....-...++..++.. +++. |+|.+|.....+... . ..+
T Consensus 34 ~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~~Np~~~rI~~~f~~~------~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl 106 (187)
T KOG0034|consen 34 RLYERFKKLDRNNGDGYLTKEEFLSIPE-LALNPLADRIIDRFDTD------GNGDPVDFEEFVRLLSVFSPKASKREKL 106 (187)
T ss_pred HHHHHHHHhccccccCccCHHHHHHHHH-HhcCcHHHHHHHHHhcc------CCCCccCHHHHHHHHhhhcCCccHHHHH
Confidence 455668889988 899999999998883 33333445777777776 4444 999999887665432 1 357
Q ss_pred HHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCC--HH----HHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 272 SLAIFTYG-KVNGVLTKRDFQRAASKVCGISIS--DN----VVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 272 ~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls--~~----e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+-||+.|| +++|.|+.+|+.+++..+.|...+ ++ .++.+|..+|.|+||.||++||++++.+.+
T Consensus 107 ~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P 177 (187)
T KOG0034|consen 107 RFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQP 177 (187)
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCc
Confidence 88999999 999999999999999998886666 43 477899999999999999999999998874
No 20
>PTZ00184 calmodulin; Provisional
Probab=99.47 E-value=7.7e-13 Score=106.37 Aligned_cols=63 Identities=29% Similarity=0.355 Sum_probs=50.8
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
.....|..+|.+++|.|++.||..++..+ ......+..+|+.+|.+++|.|++++|..++...
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~ 76 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARK 76 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHh
Confidence 34688888999999999999998887765 3455678888999998889999999988877544
No 21
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.44 E-value=1.8e-12 Score=97.20 Aligned_cols=131 Identities=17% Similarity=0.264 Sum_probs=104.8
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHh------
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQ------ 267 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~------ 267 (364)
+.++.+|..||..++|+|+..+...+|.+.+ +..++.+.+....... .....++|+.|....+.+.+
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~----~~~~rl~FE~fLpm~q~vaknk~q~t 86 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRRE----MNVKRLDFEEFLPMYQQVAKNKDQGT 86 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccch----hhhhhhhHHHHHHHHHHHHhccccCc
Confidence 5678899999999999999999999988775 4444545554333211 13478999999887765543
Q ss_pred hHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 268 LQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 268 ~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
.+.+-.-++.|| .++|.|...|++++|.. +|..++++|++.+.+-. .|.+|.|.|+.|++.|-.
T Consensus 87 ~edfvegLrvFDkeg~G~i~~aeLRhvLtt-lGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 87 YEDFVEGLRVFDKEGNGTIMGAELRHVLTT-LGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIMS 151 (152)
T ss_pred HHHHHHHHHhhcccCCcceeHHHHHHHHHH-HHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHhc
Confidence 345777788889 99999999999999999 99999999999999887 468899999999998753
No 22
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.43 E-value=1e-11 Score=110.42 Aligned_cols=248 Identities=17% Similarity=0.205 Sum_probs=169.3
Q ss_pred CCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHHHHHHhC------C
Q 042758 34 GGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLLS------I 107 (364)
Q Consensus 34 ~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~------~ 107 (364)
+..|.||..|-+-.+.-+..| +.....-|+.+|.||||.|+.+||..++.... .
T Consensus 211 g~~GLIsfSdYiFLlTlLS~p--------------------~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~ 270 (489)
T KOG2643|consen 211 GESGLISFSDYIFLLTLLSIP--------------------ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGV 270 (489)
T ss_pred CCCCeeeHHHHHHHHHHHccC--------------------cccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccce
Confidence 567788999976544322111 11335678999999999999999998775430 0
Q ss_pred ----------C-hhhHHH--HHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhc
Q 042758 108 ----------P-ESSFSV--AFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFF 174 (364)
Q Consensus 108 ----------~-~~~~~~--~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (364)
+ ...+.. .-..|-.++++.++.+||.+++..+.. +..++-+..+
T Consensus 271 ~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~-----------------------Eil~lEF~~~ 327 (489)
T KOG2643|consen 271 RHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQE-----------------------EILELEFERF 327 (489)
T ss_pred ecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHH-----------------------HHHHHHHHHh
Confidence 0 011111 223478899999999999999998843 4455556678
Q ss_pred CCCCCccccHHHHHHHHHHHH-------HHHHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCC
Q 042758 175 GKDGQTCLRHERFVQFLRDLH-------EEILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPK 247 (364)
Q Consensus 175 d~~~dg~is~~eF~~~~~~~~-------~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 247 (364)
|....|.|+-.+|..++-... ...++.+=+.++.++. .||++||.....-..+..+....+.-+..
T Consensus 328 ~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~-gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~------ 400 (489)
T KOG2643|consen 328 DKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGK-GISLQEFKAFFRFLNNLNDFDIALRFYHM------ 400 (489)
T ss_pred CcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCC-CcCHHHHHHHHHHHhhhhHHHHHHHHHHH------
Confidence 888889999999999875332 2245666666766544 59999999887655555555555544433
Q ss_pred CCCCcccHHHHHHHHHHHHhhH----HHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCc
Q 042758 248 LRPIRITYKEFKDFAELRKQLQ----FLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSI 322 (364)
Q Consensus 248 ~~~~~i~~~~F~~~~~~~~~~~----~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~I 322 (364)
....|+..+|..........+ .+..+|..|| |+||.|+.+||..+++.=+ .
T Consensus 401 -Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rm---------------h-------- 456 (489)
T KOG2643|consen 401 -AGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRM---------------H-------- 456 (489)
T ss_pred -cCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHh---------------h--------
Confidence 456788888887766554433 3777899999 9999999999999998721 0
Q ss_pred CHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHhhhhccCCC
Q 042758 323 SPDEFVRVLQRRERDTARPREPGFKGLITCWKNCATATKCSF 364 (364)
Q Consensus 323 s~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
+.-+.+...-...++..+|||.+.|.++-+..|
T Consensus 457 ---------rgl~~p~~~gl~~~~~~v~kc~k~~~~a~~~~~ 489 (489)
T KOG2643|consen 457 ---------RGLELPKDTGLLRYMKAVKKCIKEVSSAWPLPF 489 (489)
T ss_pred ---------ccccCCcccchHHHHHHHHHHHHhhhhhccCCC
Confidence 001233333445577889999999998876543
No 23
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.36 E-value=3.7e-12 Score=104.64 Aligned_cols=227 Identities=17% Similarity=0.179 Sum_probs=148.4
Q ss_pred cccCChhHHHHHHcCCCCcccCHHHHHHHHHHh-----CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhcc
Q 042758 73 ELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL-----SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAA 147 (364)
Q Consensus 73 ~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l-----~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~ 147 (364)
..++.+..+|+..|.|.||.|+-.|.++++... ....++-+..|+..|.|++|.|+.+|+..-+.....+.....
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 344566789999999999999999999977542 233455677899999999999999999988876644322211
Q ss_pred ccccccccCCCCCCCcccchhhHhhhc------C-CCCCccccHHHHHHHHH-----HHHHHHHHHHHhcccCCCCCccC
Q 042758 148 RHRDGRRVGFKAPDQSVENGGVIEYFF------G-KDGQTCLRHERFVQFLR-----DLHEEILQLEFAHYDCKLRGTIS 215 (364)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------d-~~~dg~is~~eF~~~~~-----~~~~~~~~~~F~~~D~~~~G~i~ 215 (364)
.........+++.+ +....+.... | ...+-.+|-.||..++. .....++..+...+|++|+..++
T Consensus 178 adairlneelkVDe---EtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlS 254 (362)
T KOG4251|consen 178 ADAIRLNEELKVDE---ETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLS 254 (362)
T ss_pred HHHhhccCcccccH---HHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeec
Confidence 11111122233322 2222222221 1 12345677799998884 22335677788889999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHHHHhhhc-ccCCCcCHHHHHHHH
Q 042758 216 AKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSLAIFTYG-KVNGVLTKRDFQRAA 294 (364)
Q Consensus 216 ~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l 294 (364)
-.+|...........+.+.+-..- ... +....-...| +.+|.+|.+|+..++
T Consensus 255 vpeFislpvGTVenqqgqdiddnw------------------------vkd---RkkEFeElIDsNhDGivTaeELe~y~ 307 (362)
T KOG4251|consen 255 VPEFISLPVGTVENQQGQDIDDNW------------------------VKD---RKKEFEELIDSNHDGIVTAEELEDYV 307 (362)
T ss_pred chhhhcCCCcchhhhhccchHHHH------------------------HHH---HHHHHHHHhhcCCccceeHHHHHhhc
Confidence 999976554322111111111000 000 1111111223 999999999999997
Q ss_pred HHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHH
Q 042758 295 SKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRV 330 (364)
Q Consensus 295 ~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~ 330 (364)
.. .+..++-.++..++..-|.|++..++.+|.+..
T Consensus 308 dP-~n~~~alne~~~~ma~~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 308 DP-QNFRLALNEVNDIMALTDANNDEKLSLEELLER 342 (362)
T ss_pred Cc-hhhhhhHHHHHHHHhhhccCCCcccCHHHHHHH
Confidence 77 677788899999999999999999999998763
No 24
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.34 E-value=6.2e-11 Score=96.97 Aligned_cols=152 Identities=18% Similarity=0.291 Sum_probs=95.8
Q ss_pred hCCChhhHHHHHhhhccC-CCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCcccc
Q 042758 105 LSIPESSFSVAFKMFDLN-NNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLR 183 (364)
Q Consensus 105 l~~~~~~~~~~F~~~D~d-~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is 183 (364)
...+..+++..++-|=.+ .+|.++.++|+.++..+... ..+......++..+|.|++|.|+
T Consensus 21 t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~------------------gd~~~y~~~vF~~fD~~~dg~i~ 82 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPD------------------GDASKYAELVFRTFDKNKDGTID 82 (193)
T ss_pred cCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCC------------------CCHHHHHHHHHHHhcccCCCCcC
Confidence 345667777777766444 48888888888888776321 11233455556666777777777
Q ss_pred HHHHHHHHHHH----HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHH
Q 042758 184 HERFVQFLRDL----HEEILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFK 259 (364)
Q Consensus 184 ~~eF~~~~~~~----~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~ 259 (364)
+.||+..+..+ ..+.+.-+|+.||.|++|.|+..|+..++.+.. .++... ..
T Consensus 83 F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~------~m~~~~-~~----------------- 138 (193)
T KOG0044|consen 83 FLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIY------QMTGSK-AL----------------- 138 (193)
T ss_pred HHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHH------HHcccc-cC-----------------
Confidence 77766655422 234556668888888888888888777665411 111000 00
Q ss_pred HHHHHHHhhHHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 260 DFAELRKQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 260 ~~~~~~~~~~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
. . ...-..+-++.+|+.+|.|+||.||++||+.....-.
T Consensus 139 --------------------~-~----------------~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 139 --------------------P-E----------------DEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred --------------------C-c----------------ccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 0 0 0012334488999999999999999999999887654
No 25
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.31 E-value=4.5e-11 Score=105.71 Aligned_cols=128 Identities=20% Similarity=0.285 Sum_probs=109.2
Q ss_pred HHHHHHhcccCCCCCccCHHHHHHHHHHhc----ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHH
Q 042758 198 ILQLEFAHYDCKLRGTISAKDFALSLVASA----DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSL 273 (364)
Q Consensus 198 ~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~ 273 (364)
.++.+|+.+|.+++|.++..++.+.+.... ..+-.+.++..++.+ .++.++|.+|..+.. .+-..+..
T Consensus 15 r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~------~dg~vDy~eF~~Y~~--~~E~~l~~ 86 (463)
T KOG0036|consen 15 RIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDAN------RDGRVDYSEFKRYLD--NKELELYR 86 (463)
T ss_pred HHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccC------cCCcccHHHHHHHHH--HhHHHHHH
Confidence 578889999999999999999998887654 335566777788877 899999999998765 23334666
Q ss_pred HHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 274 AIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 274 a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
.|...| +.||.|...|+.+.++. +|++|+++++..+|+.+|.++++.|+++||-.++.--
T Consensus 87 ~F~~iD~~hdG~i~~~Ei~~~l~~-~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 87 IFQSIDLEHDGKIDPNEIWRYLKD-LGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY 147 (463)
T ss_pred HHhhhccccCCccCHHHHHHHHHH-hCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC
Confidence 777777 99999999999999999 8999999999999999999999999999998876544
No 26
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.30 E-value=1.9e-11 Score=108.05 Aligned_cols=156 Identities=19% Similarity=0.250 Sum_probs=118.6
Q ss_pred HHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHHH
Q 042758 22 KVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILF 101 (364)
Q Consensus 22 ~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~ 101 (364)
.+|..|++ +++|+++..++.+.+...--+. +... .+..+|+.+|.|.||.++|+||...
T Consensus 18 ~lf~~lD~----~~~g~~d~~~l~k~~~~l~~~~-------------~~~~----~~~~l~~~~d~~~dg~vDy~eF~~Y 76 (463)
T KOG0036|consen 18 CLFKELDS----KNDGQVDLDQLEKGLEKLDHPK-------------PNYE----AAKMLFSAMDANRDGRVDYSEFKRY 76 (463)
T ss_pred HHHHHhcc----CCCCceeHHHHHHHHHhcCCCC-------------CchH----HHHHHHHhcccCcCCcccHHHHHHH
Confidence 56777776 8999999999998876543221 1111 4479999999999999999999998
Q ss_pred HHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCcc
Q 042758 102 VTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTC 181 (364)
Q Consensus 102 ~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~ 181 (364)
+. ..+.++..+|+.+|.++||.|+..|+...+..++ .+++. +..+.+.+.+|+++++.
T Consensus 77 ~~---~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g----------------i~l~d---e~~~k~~e~~d~~g~~~ 134 (463)
T KOG0036|consen 77 LD---NKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG----------------IQLSD---EKAAKFFEHMDKDGKAT 134 (463)
T ss_pred HH---HhHHHHHHHHhhhccccCCccCHHHHHHHHHHhC----------------CccCH---HHHHHHHHHhccCCCee
Confidence 75 3567889999999999999999999999999884 34433 55566778899999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHH------HhcccCCCCCccCHHHHHH
Q 042758 182 LRHERFVQFLRDLHEEILQLE------FAHYDCKLRGTISAKDFAL 221 (364)
Q Consensus 182 is~~eF~~~~~~~~~~~~~~~------F~~~D~~~~G~i~~~ef~~ 221 (364)
|+++||..++.....+.+..+ +..+|-..+..|. +++..
T Consensus 135 I~~~e~rd~~ll~p~s~i~di~~~W~h~~~idigE~~~iP-dg~s~ 179 (463)
T KOG0036|consen 135 IDLEEWRDHLLLYPESDLEDIYDFWRHVLLIDIGEDAVLP-DGDSK 179 (463)
T ss_pred eccHHHHhhhhcCChhHHHHHHHhhhhheEEEccccccCC-cchHH
Confidence 999999998865444444433 2246777777776 45543
No 27
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.20 E-value=5.6e-10 Score=85.46 Aligned_cols=125 Identities=19% Similarity=0.320 Sum_probs=98.6
Q ss_pred hhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHH
Q 042758 110 SSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189 (364)
Q Consensus 110 ~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~ 189 (364)
++++++|..+|.|+||.|+.++++.++..++.. +++ +....+. ....|.|+|--|+.
T Consensus 32 qEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~----------------~~d---~elDaM~----~Ea~gPINft~FLT 88 (171)
T KOG0031|consen 32 QEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKI----------------ASD---EELDAMM----KEAPGPINFTVFLT 88 (171)
T ss_pred HHHHHHHHHHhccCCCcccHHHHHHHHHHcCCC----------------CCH---HHHHHHH----HhCCCCeeHHHHHH
Confidence 688999999999999999999999999888542 222 2333333 25678999999999
Q ss_pred HHHHH-----HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHH
Q 042758 190 FLRDL-----HEEILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDF 261 (364)
Q Consensus 190 ~~~~~-----~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~ 261 (364)
++..- .++.+..+|..||++++|.|..+.++.+|...+ ++++++.+++.+-.. ..|.++|..|...
T Consensus 89 mfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d------~~G~~dy~~~~~~ 162 (171)
T KOG0031|consen 89 MFGEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPID------KKGNFDYKAFTYI 162 (171)
T ss_pred HHHHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcc------cCCceeHHHHHHH
Confidence 88532 357799999999999999999999999998765 778888888766554 5677777777655
Q ss_pred HH
Q 042758 262 AE 263 (364)
Q Consensus 262 ~~ 263 (364)
..
T Consensus 163 it 164 (171)
T KOG0031|consen 163 IT 164 (171)
T ss_pred HH
Confidence 43
No 28
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.16 E-value=1.6e-10 Score=83.03 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=62.2
Q ss_pred HhhHHHHHHHhhhc--ccCCCcCHHHHHHHHHHHhCCCCCH-HHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 266 KQLQFLSLAIFTYG--KVNGVLTKRDFQRAASKVCGISISD-NVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~~g~Is~~Ef~~~l~~~~~~~ls~-~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
..+..+..+|+.|| +++|+|+..||+.++...+|..+++ .+++.+++.+|.|+||.|+|+||+.+|..-.
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 45667888999998 4999999999999999866777898 9999999999999999999999999987653
No 29
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.15 E-value=1.2e-09 Score=82.13 Aligned_cols=125 Identities=18% Similarity=0.300 Sum_probs=91.6
Q ss_pred ChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhh--cCCC--CCcccc
Q 042758 108 PESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYF--FGKD--GQTCLR 183 (364)
Q Consensus 108 ~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~--~dg~is 183 (364)
+..+++.+|..||..++|.|+..+...+|+.++ .+|++ .+..... ...+ +-..|+
T Consensus 9 ~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG----------------~nPT~-----aeV~k~l~~~~~~~~~~~rl~ 67 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRTGDGKISGSQVGDVLRALG----------------QNPTN-----AEVLKVLGQPKRREMNVKRLD 67 (152)
T ss_pred hHHHHHHHHHHHhccCcccccHHHHHHHHHHhc----------------CCCcH-----HHHHHHHcCcccchhhhhhhh
Confidence 347899999999999999999999999999884 34443 2222222 2222 337899
Q ss_pred HHHHHHHHHHHHHH-------HHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcc
Q 042758 184 HERFVQFLRDLHEE-------ILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRI 253 (364)
Q Consensus 184 ~~eF~~~~~~~~~~-------~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i 253 (364)
|++|+-++..+... ..-.-.+.||++++|.|...|++.+|...+ +..++..++..... .+|.|
T Consensus 68 FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~eD-------~nG~i 140 (152)
T KOG0030|consen 68 FEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQED-------SNGCI 140 (152)
T ss_pred HHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccccc-------cCCcC
Confidence 99999999876542 244457889999999999999999998765 66777777764333 56677
Q ss_pred cHHHHHH
Q 042758 254 TYKEFKD 260 (364)
Q Consensus 254 ~~~~F~~ 260 (364)
.|+.|+.
T Consensus 141 ~YE~fVk 147 (152)
T KOG0030|consen 141 NYEAFVK 147 (152)
T ss_pred cHHHHHH
Confidence 7777664
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.15 E-value=9.8e-11 Score=80.06 Aligned_cols=60 Identities=37% Similarity=0.626 Sum_probs=52.0
Q ss_pred HHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHH----HHHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 271 LSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDN----VVDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 271 ~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~----e~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
+..+|+.+| +++|+|+.+||..++.. ++..+++. .+..+|+.+|.|+||.|+++||+.++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 567888999 99999999999999999 77666554 45556999999999999999999875
No 31
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=99.11 E-value=1.8e-10 Score=75.28 Aligned_cols=53 Identities=49% Similarity=0.809 Sum_probs=49.3
Q ss_pred cCCCcCHHHHHHHHHHHhCCC-CCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 281 VNGVLTKRDFQRAASKVCGIS-ISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 281 ~~g~Is~~Ef~~~l~~~~~~~-ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
.+|.|+.++|+.++.. +|.. ++++++..||..+|.|++|.|+|+||+.++..+
T Consensus 1 ~~G~i~~~~~~~~l~~-~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~~ 54 (54)
T PF13833_consen 1 KDGKITREEFRRALSK-LGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQRR 54 (54)
T ss_dssp SSSEEEHHHHHHHHHH-TTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHH-hCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHhC
Confidence 4799999999999966 8999 999999999999999999999999999998753
No 32
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=99.09 E-value=9.3e-09 Score=92.67 Aligned_cols=237 Identities=14% Similarity=0.195 Sum_probs=168.7
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh-CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCC
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL-SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGF 157 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l-~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (364)
..+|.+++.+..|.|+...|...+... ......+.+++..++..+.|++..++|...|..+-... ++
T Consensus 142 ~~~f~k~~~d~~g~it~~~Fi~~~~~~~~l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Th------------pl 209 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKFINYWMRGLMLTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATH------------PL 209 (493)
T ss_pred hhhhhhhccCcCCceeHHHHHHHHHhhhhHHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcC------------Cc
Confidence 478899999999999999999987664 66777888899999999999999999999998764421 11
Q ss_pred CCCCC-c-------ccchhhHhhhcCCCCCccccHHHHHH--HHHHH---HH----------------HHHHHHHhcccC
Q 042758 158 KAPDQ-S-------VENGGVIEYFFGKDGQTCLRHERFVQ--FLRDL---HE----------------EILQLEFAHYDC 208 (364)
Q Consensus 158 ~~~~~-~-------~~~~~~~~~~~d~~~dg~is~~eF~~--~~~~~---~~----------------~~~~~~F~~~D~ 208 (364)
..... + ......++-+++..+.|.|+..+..+ ++..+ .+ -++-..|..+|+
T Consensus 210 ~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~ 289 (493)
T KOG2562|consen 210 EFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDT 289 (493)
T ss_pred hhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhcc
Confidence 11110 0 01133444457889999999999765 22221 11 113334888999
Q ss_pred CCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhh---HHHHHHHhhhc-ccCCC
Q 042758 209 KLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQL---QFLSLAIFTYG-KVNGV 284 (364)
Q Consensus 209 ~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~---~~~~~a~~~~d-~~~g~ 284 (364)
|++|.|+.+++...-....+..-+++++..+... .....+|.++|++|+.|.-.+..- ..+.=-|+-.| +++|.
T Consensus 290 Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~--~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~ 367 (493)
T KOG2562|consen 290 DHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRG--FTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGI 367 (493)
T ss_pred ccccccCHHHHHHHhccchhhHHHHHHHhhcccc--ceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCc
Confidence 9999999999998877766666666666633321 122378899999999986644322 22555667777 99999
Q ss_pred cCHHHHHHHHHHHh------CC-CC-CHHHHHHHHHhhcCCCCCCcCHHHHHH
Q 042758 285 LTKRDFQRAASKVC------GI-SI-SDNVVDVIFHVFDTNRDGSISPDEFVR 329 (364)
Q Consensus 285 Is~~Ef~~~l~~~~------~~-~l-s~~e~~~lf~~~D~d~dg~Is~~EF~~ 329 (364)
|+..|++......+ |. .+ =++.+..++..+.+-..|+|+..+|..
T Consensus 368 Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 368 LTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 99999998766633 21 22 355577788888877789999999876
No 33
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.07 E-value=1e-09 Score=78.91 Aligned_cols=70 Identities=19% Similarity=0.264 Sum_probs=61.9
Q ss_pred HhhHHHHHHHhhhc--ccCC-CcCHHHHHHHHHH----HhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 266 KQLQFLSLAIFTYG--KVNG-VLTKRDFQRAASK----VCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~~g-~Is~~Ef~~~l~~----~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
..+..+..+|+.|| +++| .|+.+||+.+|+. ++|...++++++.+++.+|.|++|.|+|+||+.++....
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 45667888999996 7999 5999999999997 567788999999999999999999999999999987653
No 34
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=99.06 E-value=1.1e-09 Score=78.78 Aligned_cols=69 Identities=19% Similarity=0.361 Sum_probs=59.2
Q ss_pred HhhHHHHHHHhhhc--cc-CCCcCHHHHHHHHHHH--hCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 266 KQLQFLSLAIFTYG--KV-NGVLTKRDFQRAASKV--CGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~-~g~Is~~Ef~~~l~~~--~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+.+..+-..|..|+ ++ +|+|+.+||+.++... +|..+++++++.+++.+|.|++|.|+|+||+.+|..-
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 44556677788887 55 7899999999999742 5888999999999999999999999999999998754
No 35
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.03 E-value=1.7e-09 Score=89.15 Aligned_cols=176 Identities=16% Similarity=0.144 Sum_probs=108.4
Q ss_pred cCCChHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCH
Q 042758 16 MQSPPEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISF 95 (364)
Q Consensus 16 ~~~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~ 95 (364)
+..+.+++-..|...+- |.+++||..|+.++|... +.+.. ++.....+..|+..|+||||.|++
T Consensus 96 prrsrrklmviFsKvDV-NtDrkisAkEmqrwImek--------taEHf-------qeameeSkthFraVDpdgDGhvsW 159 (362)
T KOG4251|consen 96 PRRSRRKLMVIFSKVDV-NTDRKISAKEMQRWIMEK--------TAEHF-------QEAMEESKTHFRAVDPDGDGHVSW 159 (362)
T ss_pred hhHHHHHHHHHHhhccc-CccccccHHHHHHHHHHH--------HHHHH-------HHHHhhhhhheeeeCCCCCCceeh
Confidence 34456677778888887 999999999999998632 11111 111224467899999999999999
Q ss_pred HHHHHHHHHh-CCChhhH---------------HHHHhhhccCCCCC---------ccHHHHHHHHHHHhhhhhhccccc
Q 042758 96 PEYILFVTLL-SIPESSF---------------SVAFKMFDLNNNGE---------IDRDEFKKVMNLMRSENKQAARHR 150 (364)
Q Consensus 96 ~Ef~~~~~~l-~~~~~~~---------------~~~F~~~D~d~~G~---------Is~~Ef~~~l~~~~~~~~~~~~~~ 150 (364)
+||..-+... +.++.+. ...|..-+.+..|. ++..||..+|.--.+
T Consensus 160 dEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhS--------- 230 (362)
T KOG4251|consen 160 DEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS--------- 230 (362)
T ss_pred hhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh---------
Confidence 9998755433 2222221 12222223333333 333666665532111
Q ss_pred cccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHHH-------------HHHHHHHHHHhcccCCCCCccCHH
Q 042758 151 DGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRD-------------LHEEILQLEFAHYDCKLRGTISAK 217 (364)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~~-------------~~~~~~~~~F~~~D~~~~G~i~~~ 217 (364)
+.++ ......+..-+|.|+|.+++.++|+..... ..+...+..=..+|.|.+|.+|.+
T Consensus 231 ---rgmL------rfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTae 301 (362)
T KOG4251|consen 231 ---RGML------RFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAE 301 (362)
T ss_pred ---hhhH------HHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHH
Confidence 1111 123444556689999999999999886521 111223333346799999999999
Q ss_pred HHHHHHHH
Q 042758 218 DFALSLVA 225 (364)
Q Consensus 218 ef~~~l~~ 225 (364)
|+...+..
T Consensus 302 ELe~y~dP 309 (362)
T KOG4251|consen 302 ELEDYVDP 309 (362)
T ss_pred HHHhhcCc
Confidence 99877543
No 36
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.02 E-value=2.1e-09 Score=78.47 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=59.0
Q ss_pred HHhhHHHHHHHhhhc--ccCC-CcCHHHHHHHHHHHhC----CCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 265 RKQLQFLSLAIFTYG--KVNG-VLTKRDFQRAASKVCG----ISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 265 ~~~~~~~~~a~~~~d--~~~g-~Is~~Ef~~~l~~~~~----~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
-..+..+..+|..|| +++| .|+..||+.++...++ ...++.+++.+++.+|.|+||.|+|+||+.+|.+-
T Consensus 6 e~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 6 EGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 355677888899998 6888 4999999999977332 34588899999999999999999999999998764
No 37
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.97 E-value=1.2e-08 Score=91.14 Aligned_cols=140 Identities=24% Similarity=0.311 Sum_probs=101.0
Q ss_pred HHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHH-HHHhcCCCCCCCCCcccHHHHHHHHHH------------
Q 042758 198 ILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLD-RVDEIGNEPKLRPIRITYKEFKDFAEL------------ 264 (364)
Q Consensus 198 ~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~i~~~~F~~~~~~------------ 264 (364)
.+...|+.+|++++|+|+......++.......--=.++. .+.. ...+|.+.|.........
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~-----~s~d~~v~Y~~~~~~l~~e~~~~ea~~slv 539 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLAN-----GSDDGKVEYKSTLDNLDTEVILEEAGSSLV 539 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccC-----CCcCcceehHhHHHHhhhhhHHHHHHhHHH
Confidence 4778899999999999999999999876532111101111 1111 115677777776544221
Q ss_pred ---HHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHH---hCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccC
Q 042758 265 ---RKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKV---CGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERD 337 (364)
Q Consensus 265 ---~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~---~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~ 337 (364)
.++-..+...|+..| |++|.||.+||+.+...+ ++.+++++++-.+-+.+|.|+||.|+++||+...+-..++
T Consensus 540 etLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~ 619 (631)
T KOG0377|consen 540 ETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRR 619 (631)
T ss_pred HHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcch
Confidence 111223777888888 999999999999998773 3467999999999999999999999999999998877533
Q ss_pred --CCCCC
Q 042758 338 --TARPR 342 (364)
Q Consensus 338 --~~~~~ 342 (364)
.+.|+
T Consensus 620 ~~~~~p~ 626 (631)
T KOG0377|consen 620 RSTGRPS 626 (631)
T ss_pred hhcCCCc
Confidence 34554
No 38
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.89 E-value=1.1e-08 Score=75.04 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=58.9
Q ss_pred HhhHHHHHHHhhhc--cc-CCCcCHHHHHHHHHHH----hCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 266 KQLQFLSLAIFTYG--KV-NGVLTKRDFQRAASKV----CGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~-~g~Is~~Ef~~~l~~~----~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
..+..+..+|..|| ++ +|.|+.+||+.++... +|..+++.+++.+++.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 5 HAMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34566788899997 54 6999999999999753 3567899999999999999999999999999998765
No 39
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.88 E-value=1.3e-08 Score=73.26 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=57.2
Q ss_pred HhhHHHHHHHhhhc--ccCC-CcCHHHHHHHHHHHh----CCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 266 KQLQFLSLAIFTYG--KVNG-VLTKRDFQRAASKVC----GISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~~g-~Is~~Ef~~~l~~~~----~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
..+..+..+|+.|. +++| .|+.+||+.++...+ +...++.+++.+++.+|.|+||.|+|+||+.+|..-
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 45566777888844 6765 999999999998843 345678999999999999999999999999988754
No 40
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.84 E-value=1.5e-08 Score=74.02 Aligned_cols=70 Identities=19% Similarity=0.254 Sum_probs=58.7
Q ss_pred HhhHHHHHHHhhhc--ccCCC-cCHHHHHHHHHHHhCC----CCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 266 KQLQFLSLAIFTYG--KVNGV-LTKRDFQRAASKVCGI----SISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 266 ~~~~~~~~a~~~~d--~~~g~-Is~~Ef~~~l~~~~~~----~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
..+..+..+|+.|| +++|+ |+..||+.+++..+|. .+++++++.+++.+|.|++|.|+|+||+.++.+..
T Consensus 6 ~~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 34566788888884 89994 9999999999753443 46899999999999999999999999999988653
No 41
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.82 E-value=5e-08 Score=73.99 Aligned_cols=63 Identities=22% Similarity=0.344 Sum_probs=56.2
Q ss_pred HHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHH----HHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 273 LAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVD----VIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 273 ~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~----~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
-||+.|| +++++|..+++.+.+..+....||++|+. .++...|.||||+|++.||-.+|.+.+
T Consensus 112 YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raP 179 (189)
T KOG0038|consen 112 YAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAP 179 (189)
T ss_pred heeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCc
Confidence 3788899 99999999999999999888889999864 677788999999999999999998764
No 42
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.81 E-value=1.4e-08 Score=69.34 Aligned_cols=58 Identities=31% Similarity=0.461 Sum_probs=50.0
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHhCC------ChhhHHHHHhhhccCCCCCccHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLLSI------PESSFSVAFKMFDLNNNGEIDRDEFKKVM 136 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~------~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l 136 (364)
+.+|+.+|.|++|.|+.+||..++..+.. ..+.+..+|+.+|.|++|.|+++||..++
T Consensus 3 ~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 3 KEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 68999999999999999999999988732 23456667999999999999999998764
No 43
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.79 E-value=2.3e-08 Score=68.39 Aligned_cols=60 Identities=18% Similarity=0.376 Sum_probs=53.2
Q ss_pred HHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 272 SLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 272 ~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+.+|..+| +++|.|+.+|+..++.. .| +++.++..+++.+|.+++|.|+++||+.++.-.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~-~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGK-SG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 35677777 99999999999999988 56 589999999999999999999999999988643
No 44
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.76 E-value=5.3e-08 Score=70.56 Aligned_cols=70 Identities=19% Similarity=0.320 Sum_probs=59.5
Q ss_pred HhhHHHHHHHhhhcc---cCCCcCHHHHHHHHHHHhCCCC----CHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 266 KQLQFLSLAIFTYGK---VNGVLTKRDFQRAASKVCGISI----SDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 266 ~~~~~~~~a~~~~d~---~~g~Is~~Ef~~~l~~~~~~~l----s~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+.+..+..+|..||. ++|.|+.+||..+++..+|..+ +..+++.+++.+|.|++|.|+|+||+.++....
T Consensus 5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 456668888888884 9999999999999976455444 599999999999999999999999999988653
No 45
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.74 E-value=5.6e-08 Score=71.63 Aligned_cols=65 Identities=17% Similarity=0.271 Sum_probs=58.4
Q ss_pred hHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 268 LQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 268 ~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
...+..+|..+| +++|.|+.+|++.+++. .| ++++++..+++.+|.+++|.|+++||+.++....
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 445777888888 99999999999999988 55 7899999999999999999999999999988774
No 46
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.74 E-value=5.7e-08 Score=70.10 Aligned_cols=69 Identities=23% Similarity=0.401 Sum_probs=57.6
Q ss_pred hhHHHHHHHhhhc-c--cCCCcCHHHHHHHHHHHhCCCCC----HHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 267 QLQFLSLAIFTYG-K--VNGVLTKRDFQRAASKVCGISIS----DNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 267 ~~~~~~~a~~~~d-~--~~g~Is~~Ef~~~l~~~~~~~ls----~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
.+..+...|..|+ . .+|.|+.+||+.++...+|..++ +.+++.+|+.+|.|++|.|+|+||+.++....
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 4455666777777 3 47899999999999754666677 99999999999999999999999999988653
No 47
>PLN02964 phosphatidylserine decarboxylase
Probab=98.70 E-value=1.2e-07 Score=91.74 Aligned_cols=100 Identities=19% Similarity=0.254 Sum_probs=76.4
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhc--ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHHH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASA--DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSLA 274 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~a 274 (364)
+.++.+|..+|++++|.+ +..++.+.+ .+.+.. ...+..+
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e----------------------------------~~fi~~m 184 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETE----------------------------------RSFARRI 184 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHH----------------------------------HHHHHHH
Confidence 567888999999999997 444444432 111100 0012334
Q ss_pred Hhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 275 IFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 275 ~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
|+.+| +++|.|+.+||..++.. ++...+++++..+|+.+|.|++|.|+++||..++..+.
T Consensus 185 f~~~D~DgdG~IdfdEFl~lL~~-lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 185 LAIVDYDEDGQLSFSEFSDLIKA-FGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHhCCCCCCeEcHHHHHHHHHH-hccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 44455 99999999999999998 77778999999999999999999999999999999964
No 48
>PLN02964 phosphatidylserine decarboxylase
Probab=98.69 E-value=7.1e-08 Score=93.25 Aligned_cols=100 Identities=20% Similarity=0.327 Sum_probs=74.1
Q ss_pred HHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHH
Q 042758 21 EKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYIL 100 (364)
Q Consensus 21 ~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~ 100 (364)
+++.+.|+.+|. ||+|.+ ...+..++.. ..++..+. ..++.+|..+|.|++|.|+++||+.
T Consensus 143 ~elkeaF~lfD~-dgdG~i-Lg~ilrslG~----------------~~pte~e~-~fi~~mf~~~D~DgdG~IdfdEFl~ 203 (644)
T PLN02964 143 ESACESFDLLDP-SSSNKV-VGSIFVSCSI----------------EDPVETER-SFARRILAIVDYDEDGQLSFSEFSD 203 (644)
T ss_pred HHHHHHHHHHCC-CCCCcC-HHHHHHHhCC----------------CCCCHHHH-HHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 445555555555 999976 3333333310 12333321 1358999999999999999999999
Q ss_pred HHHHhC--CChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 101 FVTLLS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 101 ~~~~l~--~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
++..+. .++++++.+|+.+|.|++|.|+.+||..++...
T Consensus 204 lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 204 LIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 998773 677889999999999999999999999999764
No 49
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.69 E-value=8e-08 Score=64.22 Aligned_cols=59 Identities=20% Similarity=0.417 Sum_probs=54.3
Q ss_pred HHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 272 SLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 272 ~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
..+|..+| +++|.|+..|+..++.. ++...+...+..+|..+|.+++|.|++++|+.++
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKS-LGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 45677777 99999999999999998 8889999999999999999999999999999876
No 50
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.66 E-value=5.5e-08 Score=73.77 Aligned_cols=63 Identities=17% Similarity=0.450 Sum_probs=53.0
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh---CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
+++-..+..||.|.++|++|+.+++.+ ...+-...-+|+.+|.|+++.|..+++...+..+..
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr 139 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTR 139 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhh
Confidence 567778899999999999999998876 233445666899999999999999999999988744
No 51
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.58 E-value=2.9e-07 Score=62.84 Aligned_cols=61 Identities=30% Similarity=0.540 Sum_probs=56.0
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
+.+|..+|.+++|.|+.+|+..++..++.+.+.++.+|+.+|.+++|.|+++||..++..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4789999999999999999999988877788899999999999999999999999988765
No 52
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.54 E-value=6.3e-06 Score=75.13 Aligned_cols=194 Identities=17% Similarity=0.215 Sum_probs=129.4
Q ss_pred CChhhHHHHHhh---hccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCcccc
Q 042758 107 IPESSFSVAFKM---FDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLR 183 (364)
Q Consensus 107 ~~~~~~~~~F~~---~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is 183 (364)
...++++.+|-. .+.++....+.++|......+... ++...+...++....|..+||.|+
T Consensus 30 a~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e-----------------~~~n~~~v~Lla~iaD~tKDglis 92 (694)
T KOG0751|consen 30 ADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNE-----------------SNFNDKIVRLLASIADQTKDGLIS 92 (694)
T ss_pred CChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhccc-----------------ccCChHHHHHHHhhhhhccccccc
Confidence 445677777654 478888999999998877655432 111134556666678889999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhc---------ChHHHHHHHHHHHhcCCCCCCCCCc
Q 042758 184 HERFVQFLRDL--HEEILQLEFAHYDCKLRGTISAKDFALSLVASA---------DLSQVNKLLDRVDEIGNEPKLRPIR 252 (364)
Q Consensus 184 ~~eF~~~~~~~--~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~ 252 (364)
|+||..+-.-+ .......+|..||..++|.+|.+++..++.... +.+-++..+. .. ....
T Consensus 93 f~eF~afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg---~~------~~r~ 163 (694)
T KOG0751|consen 93 FQEFRAFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFG---DI------RKRH 163 (694)
T ss_pred HHHHHHHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhh---hH------HHHh
Confidence 99998865422 234567899999999999999999999987643 1122222222 21 3446
Q ss_pred ccHHHHHHHHHHHHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHH-HHHhhcCCCCCCcCHHHHH
Q 042758 253 ITYKEFKDFAELRKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDV-IFHVFDTNRDGSISPDEFV 328 (364)
Q Consensus 253 i~~~~F~~~~~~~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~-lf~~~D~d~dg~Is~~EF~ 328 (364)
++|.+|..+..-.. .+.-.++|+..| .++|.||.=+|+.++-. ...++....++. +......+....+|+..|.
T Consensus 164 ~ny~~f~Q~lh~~~-~E~~~qafr~~d~~~ng~is~Ldfq~imvt-~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~ 239 (694)
T KOG0751|consen 164 LNYAEFTQFLHEFQ-LEHAEQAFREKDKAKNGFISVLDFQDIMVT-IRIHLLTPFVEENLVSVAGGNDSHQVSFSYFN 239 (694)
T ss_pred ccHHHHHHHHHHHH-HHHHHHHHHHhcccCCCeeeeechHhhhhh-hhhhcCCHHHhhhhhhhcCCCCccccchHHHH
Confidence 67777776544222 233778899999 99999999999999877 344444444554 4444444444466665553
No 53
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.54 E-value=4.1e-07 Score=65.35 Aligned_cols=65 Identities=14% Similarity=0.259 Sum_probs=56.9
Q ss_pred ChhHHHHHHcC-CCCcccCHHHHHHHHHH-hC--CCh-hhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 77 APSKFFMLFDT-NNDGLISFPEYILFVTL-LS--IPE-SSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 77 ~~~~lf~~~D~-d~dG~I~~~Ef~~~~~~-l~--~~~-~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
.+...|..+|. +++|.|+..||..++.. ++ .+. +++..+++.+|.|++|.|+++||..++..+..
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 34689999999 99999999999999987 63 344 78999999999999999999999999987643
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.51 E-value=3.9e-07 Score=68.84 Aligned_cols=58 Identities=19% Similarity=0.365 Sum_probs=50.5
Q ss_pred HHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 269 QFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 269 ~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
..+.-+|..+| +++|.|+.+|+..+. .......+..+|..+|.|+||.||++||+..+
T Consensus 48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~-----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 48 DPVGWMFNQLDGNYDGKLSHHELAPIR-----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHH-----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 44667888888 999999999999775 23457789999999999999999999999999
No 55
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.48 E-value=6.9e-07 Score=65.77 Aligned_cols=66 Identities=24% Similarity=0.473 Sum_probs=60.0
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhh
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~ 142 (364)
.+..+|..+|.+++|.|++.|+..++..++.+.+++..+|..+|.+++|.|+++||..++..+...
T Consensus 11 ~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~ 76 (96)
T smart00027 11 KYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK 76 (96)
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence 447899999999999999999999998887788999999999999999999999999999877543
No 56
>PF14658 EF-hand_9: EF-hand domain
Probab=98.48 E-value=4.7e-07 Score=59.94 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=55.1
Q ss_pred HHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCC-CCcCHHHHHHHHHhc
Q 042758 274 AIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRD-GSISPDEFVRVLQRR 334 (364)
Q Consensus 274 a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~d-g~Is~~EF~~~l~~~ 334 (364)
+|..+| ++.|.|...++..+|+.+.+...++.+++.|.+.+|+++. |.|+++.|+.+|+.|
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 567777 9999999999999999943448999999999999999987 999999999999976
No 57
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.48 E-value=1.4e-06 Score=62.09 Aligned_cols=69 Identities=19% Similarity=0.300 Sum_probs=56.5
Q ss_pred HhhHHHHHHHhhhcccCCCcCHHHHHHHHHHHhC----CCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 266 KQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCG----ISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 266 ~~~~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~----~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
..|..+-..|..|....+.+++.||+.++..-++ ..-.+..++.+|+.+|.|+||.|+|.||+.+|-.-
T Consensus 5 ~ai~~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 5 HSMEKMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3455566778888756679999999999977443 33468889999999999999999999999998764
No 58
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.47 E-value=3.5e-06 Score=75.71 Aligned_cols=100 Identities=15% Similarity=0.212 Sum_probs=73.1
Q ss_pred hCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhH-hhhcCCCCCcccc
Q 042758 105 LSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVI-EYFFGKDGQTCLR 183 (364)
Q Consensus 105 l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~dg~is 183 (364)
+.....++...|+.+|.+.+|.|+.......+..+..- +++ +..+ -+.+..+.+|.|.
T Consensus 459 l~s~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L-------------~LP--------Wr~L~~kla~~s~d~~v~ 517 (631)
T KOG0377|consen 459 LRSHRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGL-------------NLP--------WRLLRPKLANGSDDGKVE 517 (631)
T ss_pred HHhhhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcC-------------CCc--------HHHhhhhccCCCcCccee
Confidence 34566788999999999999999999999999887442 221 2222 2335566788888
Q ss_pred HHHHHHHHHH--HH--------------HHHHHHHHhcccCCCCCccCHHHHHHHHHH
Q 042758 184 HERFVQFLRD--LH--------------EEILQLEFAHYDCKLRGTISAKDFALSLVA 225 (364)
Q Consensus 184 ~~eF~~~~~~--~~--------------~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~ 225 (364)
|.+-.+.+.. +. ...+..+|+..|.|++|.|+.+||...+.-
T Consensus 518 Y~~~~~~l~~e~~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l 575 (631)
T KOG0377|consen 518 YKSTLDNLDTEVILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKL 575 (631)
T ss_pred hHhHHHHhhhhhHHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHH
Confidence 8876665521 00 123778999999999999999999988764
No 59
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.45 E-value=9.4e-07 Score=70.99 Aligned_cols=78 Identities=22% Similarity=0.395 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 255 YKEFKDFAELRKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 255 ~~~F~~~~~~~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
|.+|..|.. ..++.+...|+.|| +.||+|+..|++.+|.. +|.+-|.--++.++...|.|.||+||+.||+-+.+.
T Consensus 87 yteF~eFsr--kqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEK-LgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 87 YTEFSEFSR--KQIKDAESMFKQYDEDRDGFIDLMELKRMMEK-LGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred hhhhhHHHH--HHHHHHHHHHHHhcccccccccHHHHHHHHHH-hCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 455665544 56778888999999 99999999999999999 898888888999999999999999999999998887
Q ss_pred cc
Q 042758 334 RE 335 (364)
Q Consensus 334 ~~ 335 (364)
..
T Consensus 164 aa 165 (244)
T KOG0041|consen 164 AA 165 (244)
T ss_pred Hh
Confidence 64
No 60
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.45 E-value=8.2e-07 Score=64.80 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=53.7
Q ss_pred hhHHHHHHc-CCCCc-ccCHHHHHHHHHHh-------CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 78 PSKFFMLFD-TNNDG-LISFPEYILFVTLL-------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 78 ~~~lf~~~D-~d~dG-~I~~~Ef~~~~~~l-------~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
+..+|..|| .||+| .|+..|+..++... .....++..+++.+|.|++|.|+++||..++..+.
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 357799999 78998 59999999998652 23567899999999999999999999999998764
No 61
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.44 E-value=2.1e-07 Score=51.51 Aligned_cols=28 Identities=29% Similarity=0.585 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 306 VVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 306 e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
|++.+|+.+|.|+||.|+++||+.+|++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 5789999999999999999999999874
No 62
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.44 E-value=7.2e-07 Score=67.42 Aligned_cols=58 Identities=28% Similarity=0.345 Sum_probs=52.6
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l 136 (364)
.+.-.|..+|.|+||.|+.+|+..+. +...+..+..+|+.+|.|++|.||.+||...+
T Consensus 49 ~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 49 PVGWMFNQLDGNYDGKLSHHELAPIR--LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHH--ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 45788999999999999999999876 55667888999999999999999999999999
No 63
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.43 E-value=1.1e-06 Score=63.21 Aligned_cols=64 Identities=17% Similarity=0.270 Sum_probs=55.7
Q ss_pred ChhHHHHHHc-CCCCc-ccCHHHHHHHHHH-----hC--CChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 77 APSKFFMLFD-TNNDG-LISFPEYILFVTL-----LS--IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 77 ~~~~lf~~~D-~d~dG-~I~~~Ef~~~~~~-----l~--~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
.+...|..+| .+|+| .|+..|+..++.. ++ .+.+++..+++.+|.|++|.|+++||..++..+.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3478999998 79999 5999999999987 53 4567799999999999999999999999887653
No 64
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.36 E-value=1.9e-06 Score=57.30 Aligned_cols=58 Identities=31% Similarity=0.489 Sum_probs=52.5
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l 136 (364)
..+|..+|.+++|.|++.||..++..+ ..+.+.+..+|+.+|.+++|.|+.++|..++
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 678999999999999999999999876 5677889999999999999999999998765
No 65
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.35 E-value=1.1e-05 Score=73.30 Aligned_cols=189 Identities=19% Similarity=0.299 Sum_probs=110.7
Q ss_pred HHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHH
Q 042758 113 SVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLR 192 (364)
Q Consensus 113 ~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~ 192 (364)
-..|..++.+..|.|+...|.......... .......+....+..+.+-+.-.+|...+.
T Consensus 142 ~~~f~k~~~d~~g~it~~~Fi~~~~~~~~l--------------------~~t~~~~~v~~l~~~~~~yl~q~df~~~Lq 201 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKFINYWMRGLML--------------------THTRLEQFVNLLIQAGCSYLRQDDFKPYLQ 201 (493)
T ss_pred hhhhhhhccCcCCceeHHHHHHHHHhhhhH--------------------HHHHHHHHHHHHhccCccceeccccHHHHH
Confidence 457889999999999999999887654221 122333344455566666666666655553
Q ss_pred HHH-------------------HHHHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcc
Q 042758 193 DLH-------------------EEILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRI 253 (364)
Q Consensus 193 ~~~-------------------~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 253 (364)
.+. .-++..+|-..++.++|.|+..++.....- .-+..++..... .......
T Consensus 202 eli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll--------~~l~~l~eEed~-nq~~~~F 272 (493)
T KOG2562|consen 202 ELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLL--------DALLELDEEEDI-NQVTRYF 272 (493)
T ss_pred HHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHH--------HHHHHHHHHhhh-hhhhhhe
Confidence 221 134677888999999999999998764321 111111110000 0012233
Q ss_pred cHHHHHHHHHHHHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhh----cCCCCCCcCHHHHH
Q 042758 254 TYKEFKDFAELRKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF----DTNRDGSISPDEFV 328 (364)
Q Consensus 254 ~~~~F~~~~~~~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~----D~d~dg~Is~~EF~ 328 (364)
+|+.|....- + |-..| +.+|.|+++++...... .++.-.++.||... -.-.+|+++|++|+
T Consensus 273 S~e~f~viy~---k-------FweLD~Dhd~lidk~~L~ry~d~----tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv 338 (493)
T KOG2562|consen 273 SYEHFYVIYC---K-------FWELDTDHDGLIDKEDLKRYGDH----TLTERIVDRIFSQVPRGFTVKVEGRMDYKDFV 338 (493)
T ss_pred eHHHHHHHHH---H-------HhhhccccccccCHHHHHHHhcc----chhhHHHHHHHhhccccceeeecCcccHHHHH
Confidence 3444332211 1 11123 88888888888876443 46677778888733 33467888888888
Q ss_pred HHHHhcccCCCCCCch
Q 042758 329 RVLQRRERDTARPREP 344 (364)
Q Consensus 329 ~~l~~~~~~~~~~~~~ 344 (364)
.+|---+....+|+..
T Consensus 339 ~FilA~e~k~t~~Sle 354 (493)
T KOG2562|consen 339 DFILAEEDKDTPASLE 354 (493)
T ss_pred HHHHHhccCCCccchh
Confidence 8877666444444443
No 66
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.30 E-value=6.3e-07 Score=49.59 Aligned_cols=26 Identities=31% Similarity=0.528 Sum_probs=17.8
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTL 104 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~ 104 (364)
+.+|+.+|.|+||.|+++||+.++..
T Consensus 3 ~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 3 KEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 56677777777777777777766653
No 67
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.26 E-value=3.2e-06 Score=54.92 Aligned_cols=50 Identities=30% Similarity=0.463 Sum_probs=44.8
Q ss_pred CCcccCHHHHHHHHHHh--C-CChhhHHHHHhhhccCCCCCccHHHHHHHHHH
Q 042758 89 NDGLISFPEYILFVTLL--S-IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138 (364)
Q Consensus 89 ~dG~I~~~Ef~~~~~~l--~-~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~ 138 (364)
.+|.|+.++|..++..+ . .+.+++..+|..+|.+++|.|+++||..++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 36999999999999665 4 77899999999999999999999999998854
No 68
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.26 E-value=4.6e-06 Score=61.09 Aligned_cols=62 Identities=16% Similarity=0.206 Sum_probs=53.8
Q ss_pred hhHHHHHHcC-CC-CcccCHHHHHHHHHH-----h--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 78 PSKFFMLFDT-NN-DGLISFPEYILFVTL-----L--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 78 ~~~lf~~~D~-d~-dG~I~~~Ef~~~~~~-----l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
+...|..+|. |+ +|.|+..|+..++.. + ..+.+++..+++.+|.+++|.|+++||..++...
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4688999997 97 699999999998864 2 3467889999999999999999999999888765
No 69
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.22 E-value=5.2e-06 Score=60.54 Aligned_cols=65 Identities=20% Similarity=0.242 Sum_probs=55.9
Q ss_pred ChhHHHHHHc-CCCCc-ccCHHHHHHHHHH-h------CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 77 APSKFFMLFD-TNNDG-LISFPEYILFVTL-L------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 77 ~~~~lf~~~D-~d~dG-~I~~~Ef~~~~~~-l------~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
.+...|..+| .+++| .|+..|+..++.. + ..+.++++.+|+.+|.+++|.|+++||..++..+..
T Consensus 10 ~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 10 TLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 4478999997 99999 5999999999864 3 236788999999999999999999999999887643
No 70
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.18 E-value=9.1e-06 Score=58.74 Aligned_cols=63 Identities=17% Similarity=0.277 Sum_probs=54.7
Q ss_pred ChhHHHHHHcC--CCCcccCHHHHHHHHHH-hC------CChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 77 APSKFFMLFDT--NNDGLISFPEYILFVTL-LS------IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 77 ~~~~lf~~~D~--d~dG~I~~~Ef~~~~~~-l~------~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
.+..+|..+|. +++|.|+..|+..++.. ++ .+..++..++..+|.+++|.|++++|..++...
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 34788999999 89999999999999865 22 247889999999999999999999999988765
No 71
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.17 E-value=8e-06 Score=58.73 Aligned_cols=62 Identities=11% Similarity=0.261 Sum_probs=54.3
Q ss_pred hHHHHHHcC-CC-CcccCHHHHHHHHHH---h--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 79 SKFFMLFDT-NN-DGLISFPEYILFVTL---L--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 79 ~~lf~~~D~-d~-dG~I~~~Ef~~~~~~---l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
-.+|.+||. || +|.|+.+||..++.. + ..+.+++..+++.+|.|++|.|+++||..++..+.
T Consensus 13 i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 13 VAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 588999998 77 899999999999963 3 35788999999999999999999999999887764
No 72
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.17 E-value=1e-05 Score=58.26 Aligned_cols=62 Identities=21% Similarity=0.348 Sum_probs=52.9
Q ss_pred hHHHHH-HcCCCCc-ccCHHHHHHHHHHh-------CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 79 SKFFML-FDTNNDG-LISFPEYILFVTLL-------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 79 ~~lf~~-~D~d~dG-~I~~~Ef~~~~~~l-------~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
..+|.. +|.+|+| .|+.+||..++... ......+..+++.+|.|++|.|+++||..++..+.
T Consensus 12 ~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 12 IAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 578888 7788986 99999999998763 23457899999999999999999999999887763
No 73
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.97 E-value=5.8e-06 Score=58.95 Aligned_cols=68 Identities=24% Similarity=0.371 Sum_probs=50.4
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYI 99 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~ 99 (364)
.-.+|..|+. ..+.|+..||...+..-+|. .++....|. .+..+|..+|.|+||.|+|.||+
T Consensus 10 lI~~FhkYaG-----~~~tLsk~Elk~Ll~~Elp~---------~l~~~~d~~----~vd~im~~LD~n~Dg~vdF~EF~ 71 (91)
T cd05024 10 MMLTFHKFAG-----EKNYLNRDDLQKLMEKEFSE---------FLKNQNDPM----AVDKIMKDLDDCRDGKVGFQSFF 71 (91)
T ss_pred HHHHHHHHcC-----CCCcCCHHHHHHHHHHHhHH---------HHcCCCCHH----HHHHHHHHhCCCCCCcCcHHHHH
Confidence 3467888883 34579999999988755542 222223333 45899999999999999999999
Q ss_pred HHHHHh
Q 042758 100 LFVTLL 105 (364)
Q Consensus 100 ~~~~~l 105 (364)
.++..+
T Consensus 72 ~Lv~~l 77 (91)
T cd05024 72 SLIAGL 77 (91)
T ss_pred HHHHHH
Confidence 988765
No 74
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.92 E-value=2.7e-05 Score=48.54 Aligned_cols=48 Identities=17% Similarity=0.407 Sum_probs=39.8
Q ss_pred cCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 285 LTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 285 Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
++..|++.+|+. +++.+++.-+..||+.+|.+++|.+.-+||..+.+.
T Consensus 2 msf~Evk~lLk~-~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKM-MNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHH-TT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 578999999999 899999999999999999999999999999998763
No 75
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.86 E-value=1.5e-05 Score=42.43 Aligned_cols=25 Identities=44% Similarity=0.728 Sum_probs=21.2
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 307 VDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 307 ~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
++.+|+.+|.|+||.||++||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4578899999999999999998764
No 76
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.82 E-value=5e-05 Score=56.18 Aligned_cols=61 Identities=15% Similarity=0.269 Sum_probs=51.7
Q ss_pred HHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 271 LSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 271 ~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+...|...+.++|.|+.++.+.++.. . .|+.+.+..||...|.|+||.++.+||+-+|.=.
T Consensus 12 y~~~F~~l~~~~g~isg~~a~~~f~~-S--~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 12 YDQIFQSLDPQDGKISGDQAREFFMK-S--GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHHHHCTSSSTTEEEHHHHHHHHHH-T--TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEeHHHHHHHHHH-c--CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 45567776778899999999999877 4 5899999999999999999999999998876643
No 77
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.76 E-value=0.00044 Score=55.96 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCccCHHHHHHHHHHhcCh---HHHHHHHHHHHhcCCCCCCCCCcccHHHHHH
Q 042758 184 HERFVQFLRDLHEEILQLEFAHYDCKLRGTISAKDFALSLVASADL---SQVNKLLDRVDEIGNEPKLRPIRITYKEFKD 260 (364)
Q Consensus 184 ~~eF~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~ 260 (364)
|.+|..+-+. +-+.+...|..||.+.||+|++.|++.+|..++.+ --++.|++.++.+ .+|.+||.+|.-
T Consensus 87 yteF~eFsrk-qIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded------~dgklSfreflL 159 (244)
T KOG0041|consen 87 YTEFSEFSRK-QIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDED------FDGKLSFREFLL 159 (244)
T ss_pred hhhhhHHHHH-HHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcc------cccchhHHHHHH
Confidence 5566644333 33567888999999999999999999999987743 3457888888876 677777777665
Q ss_pred HH
Q 042758 261 FA 262 (364)
Q Consensus 261 ~~ 262 (364)
+.
T Consensus 160 If 161 (244)
T KOG0041|consen 160 IF 161 (244)
T ss_pred HH
Confidence 43
No 78
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.71 E-value=3.6e-05 Score=43.46 Aligned_cols=27 Identities=37% Similarity=0.691 Sum_probs=18.6
Q ss_pred hHHHHHhhhccCCCCCccHHHHHHHHH
Q 042758 111 SFSVAFKMFDLNNNGEIDRDEFKKVMN 137 (364)
Q Consensus 111 ~~~~~F~~~D~d~~G~Is~~Ef~~~l~ 137 (364)
+++.+|+.+|.|++|+|+.+||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 356677777777777777777777775
No 79
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.71 E-value=5.3e-05 Score=65.70 Aligned_cols=64 Identities=20% Similarity=0.351 Sum_probs=56.6
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhC---CChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLS---IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~---~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
.+..+|..||.+++|.++|.|....++.++ ....-++-+|+.|+.+.||.+...+|..++....
T Consensus 260 ~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l 326 (412)
T KOG4666|consen 260 KLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL 326 (412)
T ss_pred hhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc
Confidence 457999999999999999999999888874 4467889999999999999999999999887653
No 80
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.70 E-value=4.2e-05 Score=40.67 Aligned_cols=23 Identities=43% Similarity=0.696 Sum_probs=13.0
Q ss_pred hHHHHHHcCCCCcccCHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILF 101 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~ 101 (364)
+..|+.+|.|+||.||++||..+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 34555566666666666665543
No 81
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.68 E-value=0.00021 Score=51.49 Aligned_cols=62 Identities=16% Similarity=0.288 Sum_probs=52.0
Q ss_pred hHHHHHHcCC--CCcccCHHHHHHHHHH-h--CCC----hhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 79 SKFFMLFDTN--NDGLISFPEYILFVTL-L--SIP----ESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 79 ~~lf~~~D~d--~dG~I~~~Ef~~~~~~-l--~~~----~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
-.+|..++.. .+|.|+.+|+..++.. + ..+ ..++..+|+.+|.+++|.|+++||..++..+.
T Consensus 11 ~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 11 INVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 5788888866 4799999999999963 2 122 78899999999999999999999999887663
No 82
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.54 E-value=0.00016 Score=66.63 Aligned_cols=56 Identities=27% Similarity=0.510 Sum_probs=48.6
Q ss_pred ccCChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 74 LLCAPSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 74 ~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
++..+..+|+.+|.|+||.|+.+||.. ...+|..+|.|++|.|+.+||...+....
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-----------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-----------SDAVFDALDLNHDGKITPEEMRAGLGAAL 387 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-----------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 344668999999999999999999953 46789999999999999999999997653
No 83
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.51 E-value=0.0001 Score=41.58 Aligned_cols=28 Identities=29% Similarity=0.539 Sum_probs=23.6
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 306 VVDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 306 e~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
++..+|+.+|.|+||.|+.+||..+|+.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4678899999999999999999999874
No 84
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.51 E-value=0.0011 Score=68.36 Aligned_cols=119 Identities=15% Similarity=0.254 Sum_probs=92.0
Q ss_pred HHHHHhcccCCCCCccCHHHHHHHHHHhc----------ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHH---
Q 042758 199 LQLEFAHYDCKLRGTISAKDFALSLVASA----------DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELR--- 265 (364)
Q Consensus 199 ~~~~F~~~D~~~~G~i~~~ef~~~l~~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~--- 265 (364)
...+|..||.+.+|.++..+|..+|.+.+ ..+.++.++..+|++ .+|.|+..+|.+|..-.
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~------r~G~Vsl~dY~afmi~~ETe 2328 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPN------RDGYVSLQDYMAFMISKETE 2328 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCC------CcCcccHHHHHHHHHhcccc
Confidence 56789999999999999999999999764 335788888888887 89999999999986532
Q ss_pred --HhhHHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCC--------CCCcCHHHHHHHH
Q 042758 266 --KQLQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNR--------DGSISPDEFVRVL 331 (364)
Q Consensus 266 --~~~~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~--------dg~Is~~EF~~~l 331 (364)
..-+.|.-||+..+.+..+|++.++.+ .||+++++-.+..+-+-. -+.+.|.+|++-+
T Consensus 2329 NI~s~~eIE~AfraL~a~~~yvtke~~~~--------~ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2329 NILSSEEIEDAFRALDAGKPYVTKEELYQ--------NLTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred cccchHHHHHHHHHhhcCCccccHHHHHh--------cCCHHHHHHHHHHhhhhcccccCCCccccccHHHHHHHH
Confidence 223468888888888888899888764 367788777766663322 2457888888765
No 85
>PF14658 EF-hand_9: EF-hand domain
Probab=97.48 E-value=0.00041 Score=46.07 Aligned_cols=59 Identities=24% Similarity=0.386 Sum_probs=52.8
Q ss_pred HHHHHHcCCCCcccCHHHHHHHHHHh---CCChhhHHHHHhhhccCCC-CCccHHHHHHHHHH
Q 042758 80 KFFMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNN-GEIDRDEFKKVMNL 138 (364)
Q Consensus 80 ~lf~~~D~d~dG~I~~~Ef~~~~~~l---~~~~~~~~~~F~~~D~d~~-G~Is~~Ef~~~l~~ 138 (364)
..|..+|.++.|.|....+..++..+ ..++.+++.+-+.+|.++. |.|+.+.|..+++.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 46889999999999999999999887 3467899999999999998 99999999999864
No 86
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.47 E-value=0.00027 Score=52.27 Aligned_cols=61 Identities=26% Similarity=0.481 Sum_probs=54.6
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHh
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMR 140 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~ 140 (364)
..+|..+|. ++|.|+-.+-..++...+.+.+.+..+|...|.+++|.++.+||.-++..+.
T Consensus 13 ~~~F~~l~~-~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~ 73 (104)
T PF12763_consen 13 DQIFQSLDP-QDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLIN 73 (104)
T ss_dssp HHHHHCTSS-STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHH
T ss_pred HHHHHhcCC-CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHH
Confidence 688888885 6899999999998888788999999999999999999999999999998764
No 87
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.40 E-value=0.00034 Score=64.53 Aligned_cols=50 Identities=26% Similarity=0.471 Sum_probs=44.5
Q ss_pred HHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 271 LSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 271 ~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+..+|+.+| +++|.|+.+||.. ++.+|..+|.|+||.|+++||...+..-
T Consensus 336 l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 336 AQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 677899999 9999999999942 5789999999999999999999988754
No 88
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.32 E-value=0.00011 Score=55.50 Aligned_cols=58 Identities=28% Similarity=0.360 Sum_probs=46.1
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKK 134 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~ 134 (364)
.+.=.|..+|.|+||.|+..|+..+...+..++..++..|+..|.|+||.||..|...
T Consensus 55 ~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 55 VVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 5577899999999999999999988776777888899999999999999999999764
No 89
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.17 E-value=0.0049 Score=63.88 Aligned_cols=134 Identities=16% Similarity=0.306 Sum_probs=94.2
Q ss_pred hhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHH
Q 042758 110 SSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQ 189 (364)
Q Consensus 110 ~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~ 189 (364)
.++..+|+.||.+.+|.++..+|...|+.++-.. |+--.+.|....+.+....|++.+|.|+.++|.+
T Consensus 2253 ~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~l------------pmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2253 KEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDL------------PMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMA 2320 (2399)
T ss_pred HHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCC------------cccccCCCChhHHHHHHhcCCCCcCcccHHHHHH
Confidence 3567789999999999999999999999875421 1111111334566777789999999999999999
Q ss_pred HHHH------HHHHHHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCC--CCCCCcccHHHHHH
Q 042758 190 FLRD------LHEEILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEP--KLRPIRITYKEFKD 260 (364)
Q Consensus 190 ~~~~------~~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~i~~~~F~~ 260 (364)
++.. +..+.+..+|+.+|. +.-+|+..+..+.| ++.+....+.++....... ..-...+.|.+|..
T Consensus 2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~l----treqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~ 2394 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNL----TREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVN 2394 (2399)
T ss_pred HHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcC----CHHHHHHHHHHhhhhcccccCCCccccccHHHHHH
Confidence 9853 122468899999998 78899998876444 5566677777766532211 11334666666654
No 90
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.09 E-value=0.00033 Score=60.94 Aligned_cols=169 Identities=14% Similarity=0.097 Sum_probs=101.7
Q ss_pred CCCCCCcccchhhHhhhcCCCCCccccHHHHHHHHHHH-------HHHHHHHHHhcccCCCCCccCHHHHHHHHHHhcCh
Q 042758 157 FKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQFLRDL-------HEEILQLEFAHYDCKLRGTISAKDFALSLVASADL 229 (364)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~~~~~-------~~~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~ 229 (364)
..+++-+.+.|.++..+-+.--.-.-++.||.+..+.+ .......++... ..+.+.|-..||...+.-..+
T Consensus 181 ~~vtd~t~edc~l~vs~gql~lpm~a~l~eF~~~~r~lkL~~~gl~k~ld~y~~var-~~kg~~igi~efa~~l~vpvs- 258 (412)
T KOG4666|consen 181 TEVTDRTGEDCSLHVSYGQLLLPMSASLPEFVAKRRVLKLPLVGLIKKLDGYVYVAR-EAKGPDIGIVEFAVNLRVPVS- 258 (412)
T ss_pred CCCCCCchHHHHHHHhhccEecccccchHHHHHHHhccCCChHHHHHHHhhHHHHHH-hccCCCcceeEeeeeeecchh-
Confidence 33444345566666655554444455566666655421 111111111111 234555666666544432111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH----hhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCH
Q 042758 230 SQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRK----QLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISD 304 (364)
Q Consensus 230 ~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~----~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~ 304 (364)
..+..++..++.. ++|.++|.+...-..++- ....|+-||++|+ +-||.+...+|-.+++..+|+ ..
T Consensus 259 d~l~~~f~LFde~------~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv--~~ 330 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG------TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGV--EV 330 (412)
T ss_pred hhhhhhhheecCC------CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCc--ce
Confidence 3334444445444 566666666554433332 2344677999999 999999999999999987764 34
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 305 NVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 305 ~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
-.+.-+|...+...||+|+|++|-+++....
T Consensus 331 l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 331 LRVPVLFPSIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred eeccccchhhhcccCcceeHHHHHHHHHhCc
Confidence 4477899999999999999999999887663
No 91
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=97.01 E-value=0.00096 Score=47.47 Aligned_cols=72 Identities=18% Similarity=0.353 Sum_probs=58.1
Q ss_pred HHHHHhhhcccCCCcCHHHHHHHHHHHhCC-CCCHHHHHHHHHhhcCC----CCCCcCHHHHHHHHHhcccCCCCCC
Q 042758 271 LSLAIFTYGKVNGVLTKRDFQRAASKVCGI-SISDNVVDVIFHVFDTN----RDGSISPDEFVRVLQRRERDTARPR 342 (364)
Q Consensus 271 ~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~-~ls~~e~~~lf~~~D~d----~dg~Is~~EF~~~l~~~~~~~~~~~ 342 (364)
+..+|..|..+.+.||.++|.+.|...-+. .++++++..++..+..+ ..+.+|+++|..+|.+.......|.
T Consensus 2 i~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~N~~~~~~ 78 (83)
T PF09279_consen 2 IEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDENSIFDPE 78 (83)
T ss_dssp HHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTTCBSS-HH
T ss_pred HHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCcCCCCChH
Confidence 455677776778999999999999885555 57999999999999765 4799999999999998876665554
No 92
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.99 E-value=0.0026 Score=39.77 Aligned_cols=48 Identities=17% Similarity=0.376 Sum_probs=38.5
Q ss_pred ccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 92 LISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 92 ~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
+++|.|...++..+ ...+.-...+|+..|.+++|.+..+||..+.+.+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 37899999988876 5667778899999999999999999999988764
No 93
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.86 E-value=0.0035 Score=60.71 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=47.8
Q ss_pred hHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHH
Q 042758 111 SFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQF 190 (364)
Q Consensus 111 ~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~ 190 (364)
.++.+|+.+|...+|++|-..-+.+|...+ + +......|..+.|.|+||+++.+||+-.
T Consensus 196 KY~QlFNa~DktrsG~Lsg~qaR~aL~qS~----------------L-----pq~~LA~IW~LsDvd~DGkL~~dEfila 254 (1118)
T KOG1029|consen 196 KYRQLFNALDKTRSGYLSGQQARSALGQSG----------------L-----PQNQLAHIWTLSDVDGDGKLSADEFILA 254 (1118)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhcC----------------C-----chhhHhhheeeeccCCCCcccHHHHHHH
Confidence 467899999999999999999888886542 2 2344566777889999999999999865
Q ss_pred H
Q 042758 191 L 191 (364)
Q Consensus 191 ~ 191 (364)
+
T Consensus 255 m 255 (1118)
T KOG1029|consen 255 M 255 (1118)
T ss_pred H
Confidence 5
No 94
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.83 E-value=0.0011 Score=49.98 Aligned_cols=58 Identities=28% Similarity=0.429 Sum_probs=40.2
Q ss_pred HHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHH
Q 042758 22 KVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYIL 100 (364)
Q Consensus 22 ~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~ 100 (364)
.+-..|..+|. |++|+|+..|+......+.|+.. -+..+++..|.|+||.||..|+..
T Consensus 55 ~~~W~F~~LD~-n~d~~L~~~El~~l~~~l~~~e~--------------------C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 55 VVHWKFCQLDR-NKDGVLDRSELKPLRRPLMPPEH--------------------CARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHH---T-SSEE-TTTTGGGGSTTSTTGG--------------------GHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhHhhhcC-CCCCccCHHHHHHHHHHHhhhHH--------------------HHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34566888888 99999999999877665433322 347899999999999999999864
No 95
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=96.76 E-value=0.037 Score=54.22 Aligned_cols=138 Identities=18% Similarity=0.227 Sum_probs=102.1
Q ss_pred HHHHHHhcccCCCCCccCHHHHHHHHHHhc---ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhhHHHHHH
Q 042758 198 ILQLEFAHYDCKLRGTISAKDFALSLVASA---DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQLQFLSLA 274 (364)
Q Consensus 198 ~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~~~~~~a 274 (364)
-+...|...|.+++|.++..+...++.... +..-+..+++..+.. .++.+...+|..+..-+..-..+...
T Consensus 137 wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~------~~~k~~~~~~~~~~~~~~~rpev~~~ 210 (746)
T KOG0169|consen 137 WIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNS------QTGKLEEEEFVKFRKELTKRPEVYFL 210 (746)
T ss_pred HHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhh------ccceehHHHHHHHHHhhccCchHHHH
Confidence 356678888888888888888777766432 444455666666443 67788888888877665554477777
Q ss_pred HhhhcccCCCcCHHHHHHHHHHHhC-CCCCHHHHHHHHHhhcCC----CCCCcCHHHHHHHHHhcccCCCCC
Q 042758 275 IFTYGKVNGVLTKRDFQRAASKVCG-ISISDNVVDVIFHVFDTN----RDGSISPDEFVRVLQRRERDTARP 341 (364)
Q Consensus 275 ~~~~d~~~g~Is~~Ef~~~l~~~~~-~~ls~~e~~~lf~~~D~d----~dg~Is~~EF~~~l~~~~~~~~~~ 341 (364)
|..+..+.+.++.+++...+...-| ...+.+.+..|++.+... ..+.++.+.|..+|.....+...|
T Consensus 211 f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~~~~fdp 282 (746)
T KOG0169|consen 211 FVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSPDCNPFDP 282 (746)
T ss_pred HHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCccCCCCCc
Confidence 7777777999999999999998543 347888899999888543 557799999999999887554433
No 96
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.64 E-value=0.0025 Score=34.36 Aligned_cols=27 Identities=33% Similarity=0.644 Sum_probs=23.8
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 042758 307 VDVIFHVFDTNRDGSISPDEFVRVLQR 333 (364)
Q Consensus 307 ~~~lf~~~D~d~dg~Is~~EF~~~l~~ 333 (364)
+..+|+.+|.+++|.|++.||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567899999999999999999998864
No 97
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.34 E-value=0.013 Score=54.52 Aligned_cols=65 Identities=17% Similarity=0.236 Sum_probs=54.7
Q ss_pred HHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCC---CCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 269 QFLSLAIFTYGKVNGVLTKRDFQRAASKVCGIS---ISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 269 ~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~---ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
..+..+|...|+++|+|+..|+..++.. .+.. ...++++.++...+.|.+|.|+++||+..+-+-
T Consensus 19 ~~l~~kF~~~d~~~G~v~~~~l~~~f~k-~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 19 RELKEKFNKLDDQKGYVTVYELPDAFKK-AKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred HHHHHHHHhhcCCCCeeehHHhHHHHHH-hcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 3455577777799999999999999998 5532 468999999999999999999999999976554
No 98
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.31 E-value=0.012 Score=43.23 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=40.1
Q ss_pred Hhhhc-ccCCCcCHHHHHHHHHHHh-----CC---C-CCHHHHHH----HHHhhcCCCCCCcCHHHHHHH
Q 042758 275 IFTYG-KVNGVLTKRDFQRAASKVC-----GI---S-ISDNVVDV----IFHVFDTNRDGSISPDEFVRV 330 (364)
Q Consensus 275 ~~~~d-~~~g~Is~~Ef~~~l~~~~-----~~---~-ls~~e~~~----lf~~~D~d~dg~Is~~EF~~~ 330 (364)
|++-| +++|.|+--|+..++.-.- |. + .|+.|++. +.+.-|.|+||.|+|.||++.
T Consensus 73 F~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 73 FSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 33444 9999999999999887621 21 2 35666554 455558899999999999864
No 99
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.26 E-value=0.0068 Score=32.50 Aligned_cols=25 Identities=36% Similarity=0.659 Sum_probs=16.8
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVT 103 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~ 103 (364)
+.+|..+|.+++|.|++.||..++.
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 4566677777777777777766554
No 100
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.62 E-value=0.0046 Score=45.38 Aligned_cols=77 Identities=23% Similarity=0.339 Sum_probs=51.3
Q ss_pred ChHHH-HHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhcc-ccCccCCCcccCChhHHHHHHcCCCCcccCHH
Q 042758 19 PPEKV-FEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGF-LRGERVPGELLCAPSKFFMLFDTNNDGLISFP 96 (364)
Q Consensus 19 ~~~~~-f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~ 96 (364)
+|+++ |-+|..-+- |++++|+--|+..+|.-.-...+. +. -..-++..++...+..+.+.-|.|+||.|+|.
T Consensus 64 tpeqlqfHYF~MHDl-dknn~lDGiEl~kAiTH~H~~h~~-----ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYg 137 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDL-DKNNFLDGIELLKAITHTHDAHDS-----GHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYG 137 (144)
T ss_pred CHHHHhhhhhhhhcc-CcCCcchHHHHHHHHHHHhhhhhc-----CCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHH
Confidence 35554 667776676 999999999999998633110000 00 01113445566677778888899999999999
Q ss_pred HHHHH
Q 042758 97 EYILF 101 (364)
Q Consensus 97 Ef~~~ 101 (364)
||+..
T Consensus 138 EflK~ 142 (144)
T KOG4065|consen 138 EFLKR 142 (144)
T ss_pred HHHhh
Confidence 99753
No 101
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=95.60 E-value=0.19 Score=49.50 Aligned_cols=59 Identities=29% Similarity=0.423 Sum_probs=28.3
Q ss_pred HHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHH
Q 042758 80 KFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138 (364)
Q Consensus 80 ~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~ 138 (364)
.+|...|++++|.+++.+-..++..+ ......++..|+..|..+++.+...++..+...
T Consensus 140 ~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~ 200 (746)
T KOG0169|consen 140 SIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKE 200 (746)
T ss_pred HHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHh
Confidence 44455555555555555555444433 233344444454444445555555555544433
No 102
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=94.92 E-value=0.034 Score=44.51 Aligned_cols=86 Identities=19% Similarity=0.337 Sum_probs=56.1
Q ss_pred HHHhhhc-ccCCCcCHHHHHHHHHHHhCC---CCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccCCCC--CCch-h
Q 042758 273 LAIFTYG-KVNGVLTKRDFQRAASKVCGI---SISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTAR--PREP-G 345 (364)
Q Consensus 273 ~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~---~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~~~~--~~~~-~ 345 (364)
.+|..|. .+...++...|.+++++ +|+ .++...++.+|..+-..+...|+|++|+.+|...-..... +... .
T Consensus 6 ~~f~~fG~~~~~~m~~~~F~Kl~kD-~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~~~~~~~~~ 84 (154)
T PF05517_consen 6 KAFASFGKKNGTEMDSKNFAKLCKD-CGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGKDKSSAEEL 84 (154)
T ss_dssp HHHHCSSTSTSSEEEHHHHHHHHHH-TSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSCCCTHHHHH
T ss_pred HHHHHhcCCccccccHHHHHHHHHH-cCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 3443343 66777999999999999 663 5899999999999877777789999999999865322222 2222 3
Q ss_pred HHHHHHHHHHhhhh
Q 042758 346 FKGLITCWKNCATA 359 (364)
Q Consensus 346 ~~~~~~~~~~~~~~ 359 (364)
...+..|..+.++.
T Consensus 85 ~~kl~~~~~P~~~g 98 (154)
T PF05517_consen 85 KEKLTAGGGPSASG 98 (154)
T ss_dssp HHHHHTT--SSSSS
T ss_pred HHHHHccCcccccc
Confidence 33334665555543
No 103
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=94.10 E-value=0.15 Score=47.83 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=50.0
Q ss_pred hHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccccccCCCCCCCcccchhhHhhhcCCCCCccccHHHHHHH
Q 042758 111 SFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDGRRVGFKAPDQSVENGGVIEYFFGKDGQTCLRHERFVQF 190 (364)
Q Consensus 111 ~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~is~~eF~~~ 190 (364)
+++..|..+| |++|+|+..++..++...... ......+..+.+....+.|.+|.|+|++|+..
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~----------------~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~ 82 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLP----------------LGYFVREEIKEILGEVGVDADGRVEFEEFVGI 82 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhccc----------------ccchhHHHHHHHHhccCCCcCCccCHHHHHHH
Confidence 5667788888 888888888888888776432 00101234455555678899999999999998
Q ss_pred HHHHHHHH
Q 042758 191 LRDLHEEI 198 (364)
Q Consensus 191 ~~~~~~~~ 198 (364)
+..++...
T Consensus 83 ~~~l~s~~ 90 (627)
T KOG0046|consen 83 FLNLKSKD 90 (627)
T ss_pred HHhhhhhh
Confidence 87665443
No 104
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.45 E-value=0.14 Score=47.55 Aligned_cols=59 Identities=17% Similarity=0.254 Sum_probs=50.1
Q ss_pred HHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 274 AIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 274 a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
.|+... |-+|+|+-.--+.++.. ..|+-.|+.+||+..|.|.||.++..|||..+.-..
T Consensus 236 QFrtvQpDp~gfisGsaAknFFtK---Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 236 QFRTVQPDPHGFISGSAAKNFFTK---SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred hhhcccCCcccccccHHHHhhhhh---ccCchHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 444445 99999999888777755 368999999999999999999999999999987664
No 105
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.97 E-value=0.14 Score=50.19 Aligned_cols=62 Identities=21% Similarity=0.333 Sum_probs=52.7
Q ss_pred HHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 271 LSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 271 ~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+.+.|...| ..+|++|-..-+.+|-. ..|+...+.+|+...|.|+||+++-+||+-.|.-..
T Consensus 197 Y~QlFNa~DktrsG~Lsg~qaR~aL~q---S~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~lie 259 (1118)
T KOG1029|consen 197 YRQLFNALDKTRSGYLSGQQARSALGQ---SGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHLIE 259 (1118)
T ss_pred HHHHhhhcccccccccccHHHHHHHHh---cCCchhhHhhheeeeccCCCCcccHHHHHHHHHHHH
Confidence 445555566 99999999999988765 358999999999999999999999999998877665
No 106
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=92.43 E-value=0.08 Score=46.53 Aligned_cols=62 Identities=27% Similarity=0.400 Sum_probs=52.9
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHh---CCChhhHHHHHhhhccCCCCCccHHHHHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~ 138 (364)
.+.=.|..+|.|.++.|+..|+..+-..+ ..+....+.+|+..|.|+|..||.+|+..-|..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 55677999999999999999987765544 567788899999999999999999999998854
No 107
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.90 E-value=0.19 Score=51.66 Aligned_cols=250 Identities=15% Similarity=0.209 Sum_probs=145.6
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhhhccccccc-ccc
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENKQAARHRDG-RRV 155 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~~~~~~~~~-~~~ 155 (364)
...++|+.+|..++|.|+-.+=..++..-..+...+-.+|...|..+.|++...+|...++........-...... .+.
T Consensus 12 ~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~L~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~~~~~ 91 (847)
T KOG0998|consen 12 LFDQYFKSADPQGDGRITGAEAVAFLSKSGLPDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKKVLPA 91 (847)
T ss_pred hHHHhhhccCcccCCcccHHHhhhhhhccccchhhhhccccccccccCCccccccccccchHhhhhhcccCcCccccccc
Confidence 4479999999999999999999888877778888888999999999999999999999998764322100000000 000
Q ss_pred ---------------CCCCC--------CCcccchh--hHhhhcC--CCCCccccHHHHHHHHH--HHHHHHHHHHHhcc
Q 042758 156 ---------------GFKAP--------DQSVENGG--VIEYFFG--KDGQTCLRHERFVQFLR--DLHEEILQLEFAHY 206 (364)
Q Consensus 156 ---------------~~~~~--------~~~~~~~~--~~~~~~d--~~~dg~is~~eF~~~~~--~~~~~~~~~~F~~~ 206 (364)
..... .......+ .....|. ..++|.++-+.-...+. .+....+..+|..-
T Consensus 92 ~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~~g~~sg~~~~pil~~s~Lp~~~l~~iw~l~ 171 (847)
T KOG0998|consen 92 SAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPSNGLLSGDKAKPILLNSKLPSDVLGRIWELS 171 (847)
T ss_pred cCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCCCCccccchhhhhhhcCCCChhhhccccccc
Confidence 00000 00000000 0000111 12233333333332222 22234566778888
Q ss_pred cCCCCCccCHHHHHHHHHHhcChHHHHHHHHH-HHh------------cCCC-CCCC-----------------------
Q 042758 207 DCKLRGTISAKDFALSLVASADLSQVNKLLDR-VDE------------IGNE-PKLR----------------------- 249 (364)
Q Consensus 207 D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~-~~~------------~~~~-~~~~----------------------- 249 (364)
|.+.+|.++..||.-.+.... .++.. ... .... ...+
T Consensus 172 d~d~~g~Ld~~ef~~am~l~~------~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (847)
T KOG0998|consen 172 DIDKDGNLDRDEFAVAMHLIN------DLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSS 245 (847)
T ss_pred cccccCCCChhhhhhhhhHHH------HHhhcccCCCCccCCcccCCcchhcccccCccccccccccccccccccccccc
Confidence 999999999999987775321 11110 000 0000 0000
Q ss_pred ---------CCcccHHHHHHHHH-------H--HHhhHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHH
Q 042758 250 ---------PIRITYKEFKDFAE-------L--RKQLQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVI 310 (364)
Q Consensus 250 ---------~~~i~~~~F~~~~~-------~--~~~~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~l 310 (364)
.+.++-..+..-.. . ......+.+.|...+ +.+|.|+-.+.+..+.. . .++...+.++
T Consensus 246 l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~-~--gl~~~~l~~~ 322 (847)
T KOG0998|consen 246 LVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLP-F--GLSKPRLAHV 322 (847)
T ss_pred ccchhcccCCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCccccccccccccc-C--CCChhhhhhh
Confidence 00000000000000 0 011122444566666 99999999999988766 3 5889999999
Q ss_pred HHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 311 FHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 311 f~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+...|+.+.|.|++.+|+-.+....
T Consensus 323 w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 323 WLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred hhhcchhccCcccccccchhhhhhh
Confidence 9999999999999999987776554
No 108
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=91.53 E-value=0.22 Score=44.16 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=53.0
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
.+.=||..+|.|.||.++..|+..+-. ...+..++.+|+..|...+|.|+-.|...-+...
T Consensus 251 s~gWMFnklD~N~Dl~Ld~sEl~~I~l--dknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 251 SLGWMFNKLDTNYDLLLDQSELRAIEL--DKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred hhhhhhhccccccccccCHHHhhhhhc--cCchhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 456899999999999999999987543 6677899999999999999999999998877543
No 109
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=91.20 E-value=0.2 Score=48.33 Aligned_cols=55 Identities=24% Similarity=0.477 Sum_probs=48.7
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEF 132 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef 132 (364)
.+..+|+..|.+++|.|+|.+++..+..+ ...-+.++-+|+.+|.+++ ..+.++.
T Consensus 556 ~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 556 FLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 56899999999999999999999999887 4556788999999999998 8888887
No 110
>PLN02952 phosphoinositide phospholipase C
Probab=91.13 E-value=1.8 Score=42.43 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=58.2
Q ss_pred CCcccHHHHHHHHHHHHh-----hHHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCC-CCHHHHHHHHHhhc-------C
Q 042758 250 PIRITYKEFKDFAELRKQ-----LQFLSLAIFTYGKVNGVLTKRDFQRAASKVCGIS-ISDNVVDVIFHVFD-------T 316 (364)
Q Consensus 250 ~~~i~~~~F~~~~~~~~~-----~~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~-ls~~e~~~lf~~~D-------~ 316 (364)
.|.++|.+|..|...+.. -.++..+|..|..+.+.++.++|...|...-+.. .+.+.+..|+..+- .
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 356677777666554432 2356677777765557899999999999865543 67777777766441 1
Q ss_pred CCCCCcCHHHHHHHHHhc
Q 042758 317 NRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 317 d~dg~Is~~EF~~~l~~~ 334 (364)
.+.+.++++.|..+|...
T Consensus 94 ~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred ccccCcCHHHHHHHHcCc
Confidence 133569999999999864
No 111
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=91.05 E-value=0.63 Score=44.70 Aligned_cols=67 Identities=13% Similarity=0.064 Sum_probs=42.7
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhh
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRKQL 268 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~~~ 268 (364)
..+..+|..+|.++||.++..|++.+........-. .......... ...|.++++-|...-.+...+
T Consensus 315 ~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~----~~~~~~~t~~-~~~G~ltl~g~l~~WsL~Tll 381 (625)
T KOG1707|consen 315 RFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWT----SSPYKDSTVK-NERGWLTLNGFLSQWSLMTLL 381 (625)
T ss_pred HHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCC----CCccccccee-cccceeehhhHHHHHHHHhhc
Confidence 347788999999999999999999888765422200 0000000000 157888888888766554433
No 112
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=90.09 E-value=0.59 Score=32.95 Aligned_cols=59 Identities=10% Similarity=0.301 Sum_probs=47.5
Q ss_pred hhHHHHHHcCCCCcccCHHHHHHHHHHh----CCChhhHHHHHhhhccC----CCCCccHHHHHHHHH
Q 042758 78 PSKFFMLFDTNNDGLISFPEYILFVTLL----SIPESSFSVAFKMFDLN----NNGEIDRDEFKKVMN 137 (364)
Q Consensus 78 ~~~lf~~~D~d~dG~I~~~Ef~~~~~~l----~~~~~~~~~~F~~~D~d----~~G~Is~~Ef~~~l~ 137 (364)
+..+|..+-. +.+.|+.++|..++..- ....+.++.++..+..+ ..+.++.++|..+|.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 3688999955 78899999999999764 23577888888888544 479999999999994
No 113
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=89.90 E-value=0.23 Score=36.92 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 301 SISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 301 ~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
-|||++++.|+..+-.|..|.|.|.||+.-+...
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e 36 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSSE 36 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT---
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcccc
Confidence 3899999999999999999999999999988754
No 114
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=89.31 E-value=1.5 Score=35.31 Aligned_cols=29 Identities=10% Similarity=0.149 Sum_probs=24.2
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHHH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLVA 225 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~~ 225 (364)
+....+|..++..+.+.+|..|+..++..
T Consensus 96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 96 QKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 35677888899888899999999988875
No 115
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=88.82 E-value=0.34 Score=42.72 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=45.2
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+.++.|.+.|++-+-+.++...-...-...+++.+|.|+|..||+.|+...|--..
T Consensus 345 N~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~ 400 (421)
T KOG4578|consen 345 NSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEK 400 (421)
T ss_pred cccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcccc
Confidence 99999999998766554333334556688899999999999999999999987765
No 116
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.55 E-value=0.7 Score=43.17 Aligned_cols=61 Identities=21% Similarity=0.336 Sum_probs=53.3
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
-.-|+.+-.|-.|.|+=.--+.++.....+..++..+|+..|.|.||.++..||+.++..+
T Consensus 234 vnQFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 234 VNQFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred HhhhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 3557788888899998888788887777888999999999999999999999999998765
No 117
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=87.88 E-value=4.9 Score=32.46 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=29.3
Q ss_pred HHHHHhhhc-ccCCCcCHHHHHHHHHHHhCC-------CCCHHHHHHHHHhhcCCCCCCcCHHHHHHH
Q 042758 271 LSLAIFTYG-KVNGVLTKRDFQRAASKVCGI-------SISDNVVDVIFHVFDTNRDGSISPDEFVRV 330 (364)
Q Consensus 271 ~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~-------~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~ 330 (364)
++..|.+|+ .+.+.+|..|+..+++. -.. --+--|...++..+ .+.||.++-+.-..+
T Consensus 98 Fe~iF~kya~~~~d~LT~~E~~~m~~~-nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~v 163 (174)
T PF05042_consen 98 FEEIFSKYAKTGPDALTLRELWRMLKG-NRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGV 163 (174)
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHHh-ccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhh
Confidence 334455555 45566777777666655 111 12334444555544 345666665554443
No 118
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=87.52 E-value=0.79 Score=36.71 Aligned_cols=69 Identities=19% Similarity=0.291 Sum_probs=48.1
Q ss_pred HHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHH
Q 042758 21 EKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYIL 100 (364)
Q Consensus 21 ~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~ 100 (364)
+++|..|+++-. .+...|+...|..++... +.+...++.. .+..+|..+-..+...|+|++|+.
T Consensus 2 ~~~F~~f~~fG~-~~~~~m~~~~F~Kl~kD~-----------~i~d~k~t~t----dvDiiF~Kvk~k~~~~I~f~~F~~ 65 (154)
T PF05517_consen 2 EAVFKAFASFGK-KNGTEMDSKNFAKLCKDC-----------GIIDKKLTST----DVDIIFSKVKAKGARKITFEQFLE 65 (154)
T ss_dssp HHHHHHHHCSST-STSSEEEHHHHHHHHHHT-----------SS--SSS-HH----HHHHHHHHHT-SS-SEEEHHHHHH
T ss_pred HHHHHHHHHhcC-CccccccHHHHHHHHHHc-----------CCCCCCCchH----HHHHHHHHhhcCCCcccCHHHHHH
Confidence 678999987764 666679999999988632 2233334444 447899998777777899999999
Q ss_pred HHHHh
Q 042758 101 FVTLL 105 (364)
Q Consensus 101 ~~~~l 105 (364)
++..+
T Consensus 66 aL~~l 70 (154)
T PF05517_consen 66 ALAEL 70 (154)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 119
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=87.15 E-value=2.7 Score=30.91 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=54.0
Q ss_pred ccCCCcCHHHHHHHHHHHhC-CCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHhhh
Q 042758 280 KVNGVLTKRDFQRAASKVCG-ISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARPREPGFKGLITCWKNCAT 358 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~-~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (364)
..||.++..|...+-..+.. ..+++.+.+.++..+..-.....++.+|++.+.... .......++++.|.++-
T Consensus 11 ~aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~~l~~L~~vA~ 84 (104)
T cd07313 11 RADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHF------DYEERLELVEALWEVAY 84 (104)
T ss_pred HHcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC------CHHHHHHHHHHHHHHHH
Confidence 56888998888877655333 368899999999988877777789999999887644 22234567777777765
Q ss_pred h
Q 042758 359 A 359 (364)
Q Consensus 359 ~ 359 (364)
+
T Consensus 85 A 85 (104)
T cd07313 85 A 85 (104)
T ss_pred h
Confidence 4
No 120
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=86.49 E-value=5.8 Score=42.14 Aligned_cols=60 Identities=15% Similarity=0.362 Sum_probs=51.3
Q ss_pred HHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 273 LAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 273 ~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
..|+.|| ++.|.|++.+|.+++.. ..+.|+.|++-+..-...|.+..++|++|+.-...-
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~--~k~ytqse~dfllscae~dend~~~y~dfv~rfhep 4121 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEG--HKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHEP 4121 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhc--cccchhHHHHHHHHhhccCccccccHHHHHHHhcCc
Confidence 3577788 99999999999999865 456899999999999999999999999999866543
No 121
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=86.08 E-value=0.83 Score=40.70 Aligned_cols=57 Identities=19% Similarity=0.360 Sum_probs=47.6
Q ss_pred HHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 274 AIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 274 a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
.|.+.| +.+|.|+..|++.+-.. -.+.-++.+|..+|...||.||-.|++..+...-
T Consensus 255 MFnklD~N~Dl~Ld~sEl~~I~ld-----knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 255 MFNKLDTNYDLLLDQSELRAIELD-----KNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred hhhccccccccccCHHHhhhhhcc-----CchhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence 455666 99999999999976433 3566689999999999999999999999887764
No 122
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=85.01 E-value=8.3 Score=37.41 Aligned_cols=66 Identities=17% Similarity=0.159 Sum_probs=40.7
Q ss_pred HHHHHHHhcccCCCCCccCHHHHHHHHH----HhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDFALSLV----ASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAE 263 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef~~~l~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~ 263 (364)
..+..+|..-|.|++|.++-.|+-..=. ....+.++..+..-++..... ......++..-|..+..
T Consensus 195 ~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~-gv~~~~ltl~GFLfL~~ 264 (625)
T KOG1707|consen 195 KALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPD-GVYERGLTLPGFLFLNT 264 (625)
T ss_pred HHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCc-hhhhccccccchHHHHH
Confidence 3577889999999999999877644322 223566666665555554432 22344555555665543
No 123
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=83.64 E-value=0.6 Score=31.56 Aligned_cols=53 Identities=11% Similarity=0.187 Sum_probs=37.4
Q ss_pred HHHHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCC-------CCCcCHHHHHH
Q 042758 269 QFLSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNR-------DGSISPDEFVR 329 (364)
Q Consensus 269 ~~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~-------dg~Is~~EF~~ 329 (364)
+.+..+|+...++.++||.+||++. |++++++-+...+..-. .|.++|..|+.
T Consensus 6 eqv~~aFr~lA~~KpyVT~~dLr~~--------l~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRALAGGKPYVTEEDLRRS--------LTPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHHCTSSSCEEHHHHHHH--------S-CCCHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHHHcCCCcccHHHHHHH--------cCcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 3456677777788999999999986 45566677887775532 26788888875
No 124
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=83.28 E-value=2.5 Score=37.19 Aligned_cols=21 Identities=10% Similarity=0.025 Sum_probs=12.2
Q ss_pred hhhcCCCCCccccHHHHHHHH
Q 042758 171 EYFFGKDGQTCLRHERFVQFL 191 (364)
Q Consensus 171 ~~~~d~~~dg~is~~eF~~~~ 191 (364)
+...|+|.|..||.+||+..-
T Consensus 302 Mk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 302 MKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred HHhcccchhhhhhHHHHHhhh
Confidence 334566666666666665543
No 125
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=82.64 E-value=1.3 Score=29.94 Aligned_cols=30 Identities=33% Similarity=0.538 Sum_probs=24.6
Q ss_pred CChHHHHHhhhccccCCCceeeCHHHHHHhcC
Q 042758 18 SPPEKVFEYFASFRTPGGDVLMTPADLMRAIV 49 (364)
Q Consensus 18 ~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~ 49 (364)
.+++++...|..+ . +|..|||.+||.+.+.
T Consensus 3 ~s~eqv~~aFr~l-A-~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-A-GGKPYVTEEDLRRSLT 32 (69)
T ss_dssp STCHHHHHHHHHH-C-TSSSCEEHHHHHHHS-
T ss_pred CCHHHHHHHHHHH-H-cCCCcccHHHHHHHcC
Confidence 4678888888887 3 7999999999999875
No 126
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=79.81 E-value=16 Score=26.70 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=45.9
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHhhhh
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARPREPGFKGLITCWKNCATA 359 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (364)
.-||.++..|...+-..+....+++.+...+...+..-.+...++.+|...+..... ........++.|.|.++-+
T Consensus 11 ~aDG~v~~~E~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~r~~~l~~l~~vA~A 86 (106)
T cd07316 11 KADGRVSEAEIQAARALMDQMGLDAEARREAIRLFNEGKESDFGLEEYARQFRRACG----GRPELLLQLLEFLFQIAYA 86 (106)
T ss_pred hccCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHH
Confidence 568888888887766654444555555555555554333333678888888877541 1122334567777776654
No 127
>PLN02952 phosphoinositide phospholipase C
Probab=79.47 E-value=11 Score=37.32 Aligned_cols=52 Identities=17% Similarity=0.416 Sum_probs=41.8
Q ss_pred CCcccCHHHHHHHHHHhC----CChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 89 NDGLISFPEYILFVTLLS----IPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 89 ~dG~I~~~Ef~~~~~~l~----~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
+.|.++|.+|..+...+. .+..++..+|..+-. +.+.++.++|..+|.....
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~ 68 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQD 68 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCC
Confidence 358999999988777663 356899999999953 4578999999999987643
No 128
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=77.20 E-value=17 Score=25.66 Aligned_cols=50 Identities=14% Similarity=0.241 Sum_probs=38.6
Q ss_pred CcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 284 VLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 284 ~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
.||.+||.++.+. .|+++|+.+++.+...+-.+.=...+-+|=..++..-
T Consensus 14 ~iT~~eLlkyskq-y~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkei 63 (85)
T PF11116_consen 14 NITAKELLKYSKQ-YNISITKKQAEQIANILRGKNINIFNEQERKKLLKEI 63 (85)
T ss_pred cCCHHHHHHHHHH-hCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 4899999999999 8999999999999999966654455555555555443
No 129
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=76.10 E-value=4.4 Score=42.99 Aligned_cols=55 Identities=27% Similarity=0.364 Sum_probs=42.6
Q ss_pred HHHhcccCCCCCccCHHHHHHHHHHhc--ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHH
Q 042758 201 LEFAHYDCKLRGTISAKDFALSLVASA--DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDF 261 (364)
Q Consensus 201 ~~F~~~D~~~~G~i~~~ef~~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~ 261 (364)
..|+.||++|.|.|+..+|++.+.... ++.++..++.-.... .....+|.+|..-
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~ytqse~dfllscae~d------end~~~y~dfv~r 4117 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEAD------ENDMFDYEDFVDR 4117 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccccchhHHHHHHHHhhccC------ccccccHHHHHHH
Confidence 458899999999999999999998643 667777776544444 5667888888763
No 130
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=74.91 E-value=25 Score=25.23 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=39.2
Q ss_pred HHHHHhhhcccCCCcCHHHHHHHHHHHhCC----------CCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 271 LSLAIFTYGKVNGVLTKRDFQRAASKVCGI----------SISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 271 ~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~----------~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
++-+|..+.|++|.++...|...|.+++.+ .-.+.-+...|... ..+-.|+.++|+..|...+
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~eP 77 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSEP 77 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT--
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhCC
Confidence 444555556999999999999988885421 12566677788776 3566899999999998774
No 131
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=73.23 E-value=69 Score=33.03 Aligned_cols=126 Identities=21% Similarity=0.268 Sum_probs=82.8
Q ss_pred ccCCCCCccCHHHHHHHHHHhcChHHHHHHHHHHHhcCCCCCCCCCcccHHHH--HHHHHHHHhh---HHHHHHHhhhc-
Q 042758 206 YDCKLRGTISAKDFALSLVASADLSQVNKLLDRVDEIGNEPKLRPIRITYKEF--KDFAELRKQL---QFLSLAIFTYG- 279 (364)
Q Consensus 206 ~D~~~~G~i~~~ef~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F--~~~~~~~~~~---~~~~~a~~~~d- 279 (364)
.-.+..|.|-...+.+...+......+...+.. +..+..+...|..++| ..|..++.++ -++..+|..+.
T Consensus 157 mqvn~~grip~knI~k~F~~~k~~KrVe~al~~----~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~~ 232 (1189)
T KOG1265|consen 157 MQVNFEGRIPVKNIIKTFSADKKEKRVEKALEA----CGLPSGKNDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKISG 232 (1189)
T ss_pred hcccccccccHHHHHHHhhcCCchhHHHHHHHh----cCCCCCCcCccChhhccHHHHHHHHHhcCCchhHHHHHHHhcc
Confidence 345677888777766666543332222222222 2222223344555543 3355555554 45888888887
Q ss_pred ccCCCcCHHHHHHHHHHHh---------CCCCCHHHHHHHHHhhcCC----CCCCcCHHHHHHHHHhcc
Q 042758 280 KVNGVLTKRDFQRAASKVC---------GISISDNVVDVIFHVFDTN----RDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~---------~~~ls~~e~~~lf~~~D~d----~dg~Is~~EF~~~l~~~~ 335 (364)
+..-++|.++|..+++.-- -..+.+..+..|+..+..| .+|.+|-+-|++++..-+
T Consensus 233 ~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~gdE 301 (1189)
T KOG1265|consen 233 KKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMGDE 301 (1189)
T ss_pred CCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhCCc
Confidence 6668999999999988721 1346889999999999887 579999999999998854
No 132
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=72.83 E-value=21 Score=27.87 Aligned_cols=38 Identities=8% Similarity=0.236 Sum_probs=28.3
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCC
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTN 317 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d 317 (364)
+..+.|+.+-|+..|+.++...++++-..+||..|-..
T Consensus 44 ~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~ 81 (138)
T PF14513_consen 44 NPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKK 81 (138)
T ss_dssp EETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS---
T ss_pred CCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCc
Confidence 56668999999999999999999999999999999554
No 133
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=72.37 E-value=8.1 Score=37.80 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=15.2
Q ss_pred HHHHHHHhcccCCCCCccCHHHH
Q 042758 197 EILQLEFAHYDCKLRGTISAKDF 219 (364)
Q Consensus 197 ~~~~~~F~~~D~~~~G~i~~~ef 219 (364)
+.+.-.|+.+|+.++ ..+.++.
T Consensus 591 ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 591 EKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHhhccCCcc-ccccccc
Confidence 345666777787777 7776666
No 134
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=72.18 E-value=9.8 Score=25.83 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=11.9
Q ss_pred ccCCCcCHHHHHHHHHHHhC
Q 042758 280 KVNGVLTKRDFQRAASKVCG 299 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~ 299 (364)
-..+.|+++||.+.++.+.|
T Consensus 37 ~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 37 FKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred HHHCCCCHHHHHHHHHHHHH
Confidence 55566666666666666544
No 135
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=69.99 E-value=26 Score=31.11 Aligned_cols=26 Identities=4% Similarity=0.048 Sum_probs=17.6
Q ss_pred hhhHhhhcCCCCCccccHHHHHHHHH
Q 042758 167 GGVIEYFFGKDGQTCLRHERFVQFLR 192 (364)
Q Consensus 167 ~~~~~~~~d~~~dg~is~~eF~~~~~ 192 (364)
-..++...|.|+||.++-.|.-+++.
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaLFt 271 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEALFT 271 (442)
T ss_pred cchheeeeccCCcccccHHHHHHHHH
Confidence 34455567778888887777766554
No 136
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=69.98 E-value=13 Score=38.10 Aligned_cols=67 Identities=15% Similarity=0.069 Sum_probs=52.6
Q ss_pred hHHHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCH-----HHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 268 LQFLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISD-----NVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 268 ~~~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~-----~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
+..++..|..++ ...|.++.++|.+++.. +|...-. .++-.|+...|.+.-|.+++.+|...|.++.
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lms-lg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMS-LGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHh-cCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 345777888888 88888999999999999 8876653 2344455555777789999999999999884
No 137
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=68.45 E-value=10 Score=36.69 Aligned_cols=65 Identities=9% Similarity=0.098 Sum_probs=56.6
Q ss_pred HHHHHHhhhc-ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 270 FLSLAIFTYG-KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 270 ~~~~a~~~~d-~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
....-|...| ++.|+++.....+++.. .+..++.+.+..+.+..|.+..|.+...||..++....
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~-~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKS-ENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 3445566667 79999999999999999 67889999999999999999999999999999887654
No 138
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=67.82 E-value=9.5 Score=39.05 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=64.3
Q ss_pred hHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHH
Q 042758 20 PEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYI 99 (364)
Q Consensus 20 ~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~ 99 (364)
.+..|..|+.. ..+.+++++|.+++...-+.-.. ..+....+..+....|.++-|.+++.+|.
T Consensus 749 lrAle~~~~~~----d~~aa~~e~~~~~Lmslg~~~e~-------------ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ 811 (890)
T KOG0035|consen 749 LRALENEQDKI----DGGAASPEELLRCLMSLGYNTEE-------------EEQGIAEWFRLVNKKNPLIQGQVQLLEFE 811 (890)
T ss_pred HHHHHhHHHHh----hcccCCHHHHHHHHHhcCcccch-------------hHHHHHHHHHHHhccCcccccceeHHHHH
Confidence 44567777764 33568999999998643211110 12222344567777888888999999999
Q ss_pred HHHHHh---CCChhhHHHHHhhhccCCCCCccHHHHHH
Q 042758 100 LFVTLL---SIPESSFSVAFKMFDLNNNGEIDRDEFKK 134 (364)
Q Consensus 100 ~~~~~l---~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~ 134 (364)
..+..- .....++...|..+-.+.. +|..+|+..
T Consensus 812 ddl~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 812 DDLEREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hHhhhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 988763 3455666667777754433 788888877
No 139
>PF05819 NolX: NolX protein; InterPro: IPR008718 This family consists of Rhizobium NolX and Xanthomonas HrpF proteins. The interaction between the plant pathogen Xanthomonas campestris pv. vesicatoria (strain 85-10) and its host plants is controlled by hrp genes (hypersensitive reaction and pathogenicity), which encode a type III protein secretion system. Among type III-secreted proteins are avirulence proteins, effectors involved in the induction of plant defence reactions. HrpF is dispensable for protein secretion but required for AvrBs3 recognition in planta, is thought to function as a translocator of effector proteins into the host cell []. NolX, a Glycine max (Soybean) cultivar specificity protein, is secreted by a type III secretion system (TTSS) and shows homology to HrpF. It is not known whether NolX functions at the bacterium-plant interface or acts inside the host cell. NolX is expressed in planta only during the early stages of nodule development [].; GO: 0009877 nodulation
Probab=67.60 E-value=73 Score=30.41 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=14.7
Q ss_pred HHHHHhcccCCCCCccCHHHHHHHHH
Q 042758 199 LQLEFAHYDCKLRGTISAKDFALSLV 224 (364)
Q Consensus 199 ~~~~F~~~D~~~~G~i~~~ef~~~l~ 224 (364)
++++|++-| .=-..++.+.|++++.
T Consensus 370 ~RELYrYSd-yLPK~L~~~~f~~IVd 394 (624)
T PF05819_consen 370 MRELYRYSD-YLPKNLSLEDFKQIVD 394 (624)
T ss_pred HHHHHHhhh-ccccccCHHHHHhHhc
Confidence 455555444 2334577788887775
No 140
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=67.60 E-value=8.6 Score=19.25 Aligned_cols=15 Identities=33% Similarity=0.514 Sum_probs=7.8
Q ss_pred cCCCCcccCHHHHHH
Q 042758 86 DTNNDGLISFPEYIL 100 (364)
Q Consensus 86 D~d~dG~I~~~Ef~~ 100 (364)
|.|+||.|+--++..
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 455666665555543
No 141
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=66.93 E-value=32 Score=30.33 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=48.1
Q ss_pred ccCCCcCHHHHHHHHHHHh-CCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHhhh
Q 042758 280 KVNGVLTKRDFQRAASKVC-GISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARPREPGFKGLITCWKNCAT 358 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~-~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (364)
..||.|+..|.. +++.++ ...+++++-..+.+.|..-.....++.+|+..++... ..+...++.||++.|.++-
T Consensus 67 kADG~Vse~Ei~-~~~~l~~~~~l~~~~r~~a~~lf~~~k~~~~~l~~~~~~~~~~~----~~r~~l~~~lL~~l~~vA~ 141 (267)
T PRK09430 67 KAKGRVTEADIR-IASQLMDRMNLHGEARRAAQQAFREGKEPDFPLREKLRQFRSVC----GGRFDLLRMFLEIQIQAAF 141 (267)
T ss_pred hcCCCcCHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh----cccHHHHHHHHHHHHHHHH
Confidence 668889999988 434422 2456777744444444443444578999999888765 2334456677777777765
Q ss_pred h
Q 042758 359 A 359 (364)
Q Consensus 359 ~ 359 (364)
+
T Consensus 142 A 142 (267)
T PRK09430 142 A 142 (267)
T ss_pred h
Confidence 4
No 142
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=63.28 E-value=13 Score=34.16 Aligned_cols=56 Identities=23% Similarity=0.462 Sum_probs=45.9
Q ss_pred HHHHHhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHH
Q 042758 271 LSLAIFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVR 329 (364)
Q Consensus 271 ~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~ 329 (364)
+...|-....-+|+||-..-+.-+ .+..|+...+-.+|+..|.|.||.++-+||.-
T Consensus 446 yde~fy~l~p~~gk~sg~~ak~~m---v~sklpnsvlgkiwklad~d~dg~ld~eefal 501 (532)
T KOG1954|consen 446 YDEIFYTLSPVNGKLSGRNAKKEM---VKSKLPNSVLGKIWKLADIDKDGMLDDEEFAL 501 (532)
T ss_pred hHhhhhcccccCceeccchhHHHH---HhccCchhHHHhhhhhhcCCcccCcCHHHHHH
Confidence 555666666888999987766654 44579999999999999999999999999963
No 143
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=62.98 E-value=24 Score=23.95 Aligned_cols=49 Identities=22% Similarity=0.294 Sum_probs=37.1
Q ss_pred CCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 282 ~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
+-.++..-+-.++.. .++++.+..|...|+.=..++|+.+||++.++.-
T Consensus 6 sp~~~F~~L~~~l~~----~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 6 SPWMPFPMLFSALSK----HLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred CCcccHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 344555666666666 4788888888888877788999999999988764
No 144
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=58.84 E-value=41 Score=22.66 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=22.9
Q ss_pred cCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHH
Q 042758 285 LTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRV 330 (364)
Q Consensus 285 Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~ 330 (364)
++-+++..++.. .|..+|+.++..+++.=|..+--..+-..+..+
T Consensus 14 l~d~~m~~if~l-~~~~vs~~el~a~lrke~~~~y~~c~D~~L~~F 58 (68)
T PF07308_consen 14 LKDDDMIEIFAL-AGFEVSKAELSAWLRKEDEKGYKECSDQLLRNF 58 (68)
T ss_pred CChHHHHHHHHH-cCCccCHHHHHHHHCCCCCccccccChHHHHHH
Confidence 344555555555 556666666666666544433333333333333
No 145
>PLN02228 Phosphoinositide phospholipase C
Probab=58.60 E-value=55 Score=32.24 Aligned_cols=64 Identities=23% Similarity=0.342 Sum_probs=45.7
Q ss_pred HHHHHhhhcccCCCcCHHHHHHHHHHHhCCC-CCHHHHHHHHHhhcCC----CCCCcCHHHHHHHHHhcc
Q 042758 271 LSLAIFTYGKVNGVLTKRDFQRAASKVCGIS-ISDNVVDVIFHVFDTN----RDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 271 ~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~-ls~~e~~~lf~~~D~d----~dg~Is~~EF~~~l~~~~ 335 (364)
+..+|..+.. ++.++.++|.+.|...-|.. .+.+.+..++..+... ..|.++.+.|..+|.+..
T Consensus 26 i~~if~~~s~-~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~~ 94 (567)
T PLN02228 26 IKRLFEAYSR-NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSDT 94 (567)
T ss_pred HHHHHHHhcC-CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCcc
Confidence 3334444432 35799999999998855543 4567788888888643 347899999999998764
No 146
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.58 E-value=5.3 Score=41.38 Aligned_cols=64 Identities=28% Similarity=0.442 Sum_probs=56.1
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhh
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSE 142 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~ 142 (364)
.++|...|.+.+|.|+..++...+..-+.....+..+|...|.++.|.|+..+|.-.+..+...
T Consensus 286 ~~if~q~d~~~dG~I~s~~~~~~f~~~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 286 SKIFSQVDKDNDGSISSNEARNIFLPFGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred HHHHHhccccCCCcccccccccccccCCCChhhhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 5689999999999999999998877667788899999999999999999999988888766443
No 147
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=57.36 E-value=5.2 Score=32.86 Aligned_cols=59 Identities=20% Similarity=0.307 Sum_probs=42.4
Q ss_pred HhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCHHHHHHHHH
Q 042758 25 EYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISFPEYILFVT 103 (364)
Q Consensus 25 ~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~ 103 (364)
.+|-.++..--+|++|..|+.-.-.++.|-.. -...+|...|.|+||.|+.+|+..-+.
T Consensus 191 wqf~qld~~p~d~~~sh~el~pl~ap~ipme~--------------------c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 191 WQFGQLDQHPIDGYLSHTELAPLRAPLIPMEH--------------------CTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eeeccccCCCccccccccccccccCCcccHHh--------------------hchhhhhcccCCCCCceeHHHhhcccC
Confidence 45666665446778899998776666554432 226788899999999999999976543
No 148
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=57.31 E-value=8.9 Score=29.83 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=35.3
Q ss_pred ccCCCcCHHHHHHHHHHH-hCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 280 KVNGVLTKRDFQRAASKV-CGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~-~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
-.||.|+.+|...+...+ ....+++.+...++..++.-....+++.+++..+.+..
T Consensus 35 ~aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (140)
T PF05099_consen 35 KADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQEPIDLEELLRELRDSL 91 (140)
T ss_dssp HTTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHHHCCHHHHHHHHHCTS-
T ss_pred HcCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhccccHHHHHHHHHHhh
Confidence 567778888877666553 23446677777777777665555677777777766643
No 149
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.29 E-value=26 Score=35.32 Aligned_cols=48 Identities=23% Similarity=0.407 Sum_probs=40.1
Q ss_pred CCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 89 NDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 89 ~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
++| |+++||. ...+..+..++..|..+|. ++|.++.+++..++.....
T Consensus 1 ~~~-~~~~~~~---~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~ 48 (646)
T KOG0039|consen 1 GEG-ISFQELK---ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSIS 48 (646)
T ss_pred CCC-cchhhhc---ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHH
Confidence 357 9999998 2237788999999999997 8999999999999987644
No 150
>PLN02222 phosphoinositide phospholipase C 2
Probab=53.28 E-value=55 Score=32.38 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=48.2
Q ss_pred HHHHHHhhhcccCCCcCHHHHHHHHHHHhCCC-CCHHHHHHHHHhhcC-CCCCCcCHHHHHHHHHhcc
Q 042758 270 FLSLAIFTYGKVNGVLTKRDFQRAASKVCGIS-ISDNVVDVIFHVFDT-NRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 270 ~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~~-ls~~e~~~lf~~~D~-d~dg~Is~~EF~~~l~~~~ 335 (364)
++..+|..|.+ ++.++.++|...|...-|.. .+.+.+..|+..+.. -..+.++.+.|..+|.+..
T Consensus 26 ei~~if~~~~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s~~ 92 (581)
T PLN02222 26 EIKTIFEKYSE-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFGDN 92 (581)
T ss_pred HHHHHHHHhcC-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcCCC
Confidence 34555555544 57999999999999865543 577888888888643 2467799999999998753
No 151
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=52.48 E-value=31 Score=23.00 Aligned_cols=38 Identities=11% Similarity=0.221 Sum_probs=34.7
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCC
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNR 318 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~ 318 (364)
..++.++..++...+.. .|..+|+..+....+.++.+|
T Consensus 9 ~~~~P~g~~~l~~~L~~-~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 9 ESDKPLGRKQLAEELKL-RGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred HcCCCCCHHHHHHHHHh-cChhhhHHHHHHHHHHHHHCC
Confidence 67788999999999999 799999999999999999776
No 152
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=51.77 E-value=1.1e+02 Score=23.56 Aligned_cols=51 Identities=18% Similarity=0.285 Sum_probs=33.0
Q ss_pred cccCHHHHHHHHHHh---------CCChhhHHHHHhhhccCC--CCCccHHHHHHHHHHHhh
Q 042758 91 GLISFPEYILFVTLL---------SIPESSFSVAFKMFDLNN--NGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 91 G~I~~~Ef~~~~~~l---------~~~~~~~~~~F~~~D~d~--~G~Is~~Ef~~~l~~~~~ 141 (364)
+.|-|.-|..++..- ..+-..+..+|+....+. +..|+..++..++..++.
T Consensus 13 n~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~ 74 (127)
T PF09068_consen 13 NNIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYE 74 (127)
T ss_dssp TT-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHH
T ss_pred hhHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHH
Confidence 348888888776541 233456677787765543 467999999999998864
No 153
>PF01320 Colicin_Pyocin: Colicin immunity protein / pyocin immunity protein; InterPro: IPR023802 Bacterial colicin and pyocin immunity proteins [, ] can bind specifically to the DNase-type colicins and pyocins and inhibit their bactericidal activity. The 1.8-angstrom crystal structure of the ImmE7 protein consists of four antiparallel alpha-helices []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. Pyocin protects a cell that harbours the plasmid ColE2 encoding colicin E2 against colicin E2; it is thus essential both for autonomous replication and colicin E2 immunity []. This entry represents the structural domain of colicin and pyocin immunity proteins.; GO: 0015643 toxin binding, 0030153 bacteriocin immunity; PDB: 1GXH_A 1GXG_A 1MZ8_C 2ERH_A 1ZNV_C 1AYI_A 1UNK_A 2JBG_A 7CEI_A 1CEI_A ....
Probab=49.50 E-value=37 Score=24.02 Aligned_cols=58 Identities=14% Similarity=0.307 Sum_probs=38.6
Q ss_pred cCHHHHHHHHHHHhCCC-CCHHHHHHHHHhhcC-----C---------CCCCcCHHHHHHHHHhcccCCCCCC
Q 042758 285 LTKRDFQRAASKVCGIS-ISDNVVDVIFHVFDT-----N---------RDGSISPDEFVRVLQRRERDTARPR 342 (364)
Q Consensus 285 Is~~Ef~~~l~~~~~~~-ls~~e~~~lf~~~D~-----d---------~dg~Is~~EF~~~l~~~~~~~~~~~ 342 (364)
.|..||..++..++... -++++.+.+...|.. + .+..-|.+.-+..+..|.++.+.|-
T Consensus 10 yTE~EFl~~v~~i~~~~~~~ee~~d~lv~hF~~iteHP~gSDLIfYP~~~~edsPegIv~~vKeWRa~nG~pg 82 (85)
T PF01320_consen 10 YTESEFLEFVKEIFNAELKTEEEHDELVDHFEKITEHPDGSDLIFYPEDGREDSPEGIVKEVKEWRASNGKPG 82 (85)
T ss_dssp SBHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHHHH--TTTTHHHHS-STTSTSSHHHHHHHHHHHHHHTT---
T ss_pred hhHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCCCCCCCceeeeCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 56788888888866655 567777777777632 2 2344588888888888887766653
No 154
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=48.97 E-value=5.8 Score=32.60 Aligned_cols=53 Identities=26% Similarity=0.301 Sum_probs=40.4
Q ss_pred HHcCC-CCcccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHH
Q 042758 84 LFDTN-NDGLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVM 136 (364)
Q Consensus 84 ~~D~d-~dG~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l 136 (364)
.+|.. -||.+|-.|+.-+-..+-..+..+...|.-.|.|++|+|+.+|....+
T Consensus 195 qld~~p~d~~~sh~el~pl~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 195 QLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred cccCCCccccccccccccccCCcccHHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 34444 478888888876555444445677889999999999999999988766
No 155
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=46.44 E-value=53 Score=32.02 Aligned_cols=61 Identities=16% Similarity=0.265 Sum_probs=52.2
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
..-|..+|.|+.|.++...-+..+... .-+++.+.+..+..|.+-+|.+...||.++...+
T Consensus 596 ~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 596 KTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 467889999999999999999888765 4567788888888998889999999999888765
No 156
>PLN02230 phosphoinositide phospholipase C 4
Probab=46.00 E-value=92 Score=30.95 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=45.6
Q ss_pred HHHHHHhhhcccCCCcCHHHHHHHHHHHhCC--CCCHHHHHHHHHhhcC-------CCCCCcCHHHHHHHHHhc
Q 042758 270 FLSLAIFTYGKVNGVLTKRDFQRAASKVCGI--SISDNVVDVIFHVFDT-------NRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 270 ~~~~a~~~~d~~~g~Is~~Ef~~~l~~~~~~--~ls~~e~~~lf~~~D~-------d~dg~Is~~EF~~~l~~~ 334 (364)
++..+|..|..+++.++.++|.+.|...-+. ..+.+++..++..+-. -+.+.++.+.|..+|.+.
T Consensus 30 ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 30 DVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred HHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCc
Confidence 3555666665555899999999999985433 2466777777765421 134569999999999875
No 157
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.54 E-value=92 Score=24.38 Aligned_cols=56 Identities=14% Similarity=0.227 Sum_probs=38.5
Q ss_pred ccCCCcCHHHHHHHHHHHh-CCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcc
Q 042758 280 KVNGVLTKRDFQRAASKVC-GISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~-~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~ 335 (364)
..||.++..|..+...-+. ...++..+++.+......-+...+++-.|...|+..+
T Consensus 40 ~ADG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~L 96 (148)
T COG4103 40 EADGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHL 96 (148)
T ss_pred hcccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 6677777777655433311 2457888888888877766777788888888887654
No 158
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=43.39 E-value=54 Score=19.85 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=16.5
Q ss_pred hHHHHHHHhhhc---ccCCCcCHHHHHHHHHH
Q 042758 268 LQFLSLAIFTYG---KVNGVLTKRDFQRAASK 296 (364)
Q Consensus 268 ~~~~~~a~~~~d---~~~g~Is~~Ef~~~l~~ 296 (364)
+..+-..|..|. .....+++.||+..+..
T Consensus 5 i~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 5 IETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 333444555554 33445777777777665
No 159
>PRK00523 hypothetical protein; Provisional
Probab=42.27 E-value=95 Score=21.13 Aligned_cols=39 Identities=10% Similarity=0.065 Sum_probs=32.7
Q ss_pred HhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q 042758 275 IFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314 (364)
Q Consensus 275 ~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~ 314 (364)
++.+-..+-.|+.+-++.++.. .|..+|+..+..+++.+
T Consensus 30 ~~k~l~~NPpine~mir~M~~Q-MGqKPSekki~Q~m~~m 68 (72)
T PRK00523 30 FKKQIRENPPITENMIRAMYMQ-MGRKPSESQIKQVMRSV 68 (72)
T ss_pred HHHHHHHCcCCCHHHHHHHHHH-hCCCccHHHHHHHHHHH
Confidence 3333366788999999999999 89999999999999887
No 160
>PLN02223 phosphoinositide phospholipase C
Probab=41.71 E-value=1.1e+02 Score=29.98 Aligned_cols=66 Identities=9% Similarity=-0.126 Sum_probs=47.2
Q ss_pred HHHHHHhhhcccCCCcCHHHHHHHH---HHHhC-CCCCHHHHHHHHHhhcCC--------CCCCcCHHHHHHHHHhcc
Q 042758 270 FLSLAIFTYGKVNGVLTKRDFQRAA---SKVCG-ISISDNVVDVIFHVFDTN--------RDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 270 ~~~~a~~~~d~~~g~Is~~Ef~~~l---~~~~~-~~ls~~e~~~lf~~~D~d--------~dg~Is~~EF~~~l~~~~ 335 (364)
.+..+|..|..++|..+.+.+.+.+ ...-| ...+.++++.|+..+-.. ..+.++.+.|..+|.+..
T Consensus 17 ~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~s~~ 94 (537)
T PLN02223 17 LILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLFSTE 94 (537)
T ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhcCcc
Confidence 3555666666888899999999888 55334 346777777777765322 236799999999998864
No 161
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=41.35 E-value=1.1e+02 Score=20.42 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=29.9
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~ 314 (364)
..+-.|+.+-++.++.. .|..+|+..+..+++.+
T Consensus 27 ~~NPpine~mir~M~~Q-MG~kpSekqi~Q~m~~m 60 (64)
T PF03672_consen 27 KENPPINEKMIRAMMMQ-MGRKPSEKQIKQMMRSM 60 (64)
T ss_pred HHCCCCCHHHHHHHHHH-hCCCccHHHHHHHHHHH
Confidence 45778999999999998 89999999999998875
No 162
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=40.69 E-value=53 Score=25.74 Aligned_cols=51 Identities=10% Similarity=0.228 Sum_probs=40.2
Q ss_pred ccCCCcCHHHHHHHHHHHhC--------CCCCHHHHHHHHHhhcCCCCCC-cCHHHHHHH
Q 042758 280 KVNGVLTKRDFQRAASKVCG--------ISISDNVVDVIFHVFDTNRDGS-ISPDEFVRV 330 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~--------~~ls~~e~~~lf~~~D~d~dg~-Is~~EF~~~ 330 (364)
-|+..||.+||.+.+..-.+ +.+.++++..+-+.+...+.+. +|..|-+++
T Consensus 79 lGd~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~~~~~~~~~~~lt~~e~Lr~ 138 (141)
T PF12419_consen 79 LGDEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALAFLEKAPKGEKLTLAEALRA 138 (141)
T ss_pred ECCEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHHHHHhccccCCCCHHHHHHH
Confidence 67778999999988876222 3479999999999998877664 999988765
No 163
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=40.40 E-value=62 Score=22.87 Aligned_cols=50 Identities=22% Similarity=0.145 Sum_probs=35.4
Q ss_pred cCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 281 VNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 281 ~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
..-.|.-.+|+..+....++..+ .+...|=..+|.-.+|.||.-||--+.
T Consensus 19 ~r~IVPW~~F~~~L~~~h~~~~~-~~~~aLk~TiDlT~n~~iS~FeFdvFt 68 (85)
T PF02761_consen 19 KRTIVPWSEFRQALQKVHPISSG-LEAMALKSTIDLTCNDYISNFEFDVFT 68 (85)
T ss_dssp T-SEEEHHHHHHHHHHHS--SSH-HHHHHHHHHH-TTSSSEEEHHHHHHHH
T ss_pred CCeEeeHHHHHHHHHHhcCCCch-HHHHHHHHHHhcccCCccchhhhHHHH
Confidence 33458888888888885555444 666888888999999999988886554
No 164
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=38.13 E-value=11 Score=28.21 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=17.8
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVT 103 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~ 103 (364)
+.++..+-.|-.|.|.|.||+.-+.
T Consensus 10 drLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 10 DRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp HHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred hhhhhhCcCCccCCEeHHHHHHHcc
Confidence 6888888999999999999987554
No 165
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=38.09 E-value=1.7e+02 Score=30.14 Aligned_cols=142 Identities=20% Similarity=0.178 Sum_probs=80.0
Q ss_pred HHHHHhcccCCCCCccCHHHHHHHHHHhc-ChHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH---hhHHHHHH
Q 042758 199 LQLEFAHYDCKLRGTISAKDFALSLVASA-DLSQVNKLLDRVDEIGNEPKLRPIRITYKEFKDFAELRK---QLQFLSLA 274 (364)
Q Consensus 199 ~~~~F~~~D~~~~G~i~~~ef~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~F~~~~~~~~---~~~~~~~a 274 (364)
++..+-..|...-..|+..+++..+.... .....+.+...+..... ..+.++|+.|..+..-+- ....+...
T Consensus 146 lrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~ted~~----~k~dlsf~~f~~ly~~lmfs~~~a~l~e~ 221 (1267)
T KOG1264|consen 146 LRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTEDGA----RKDDLSFEQFHLLYKKLMFSQQKAILLEF 221 (1267)
T ss_pred HHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhHhhh----ccccccHHHHHHHHHHHhhccchhhhhcc
Confidence 44556666766666788888887776432 11222233333333222 677888888887655321 11111111
Q ss_pred Hhhhc-cc-----CCCcCHHHHHHHHHHHhCCCC--CHHHHHHHHHhhcCC-----CCCCcCHHHHHHHHHhcccCCCCC
Q 042758 275 IFTYG-KV-----NGVLTKRDFQRAASKVCGISI--SDNVVDVIFHVFDTN-----RDGSISPDEFVRVLQRRERDTARP 341 (364)
Q Consensus 275 ~~~~d-~~-----~g~Is~~Ef~~~l~~~~~~~l--s~~e~~~lf~~~D~d-----~dg~Is~~EF~~~l~~~~~~~~~~ 341 (364)
...+- .. --.+++.||++.|...-+... ....+..+++.|=.| ..-.+...||+.+|-+++.+++.|
T Consensus 222 ~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFSreNslWd~ 301 (1267)
T KOG1264|consen 222 KKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFSRENSLWDS 301 (1267)
T ss_pred cchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhhcccccccc
Confidence 11111 11 135899999999876332221 122466666666333 344679999999999998776655
Q ss_pred Cch
Q 042758 342 REP 344 (364)
Q Consensus 342 ~~~ 344 (364)
+-.
T Consensus 302 k~d 304 (1267)
T KOG1264|consen 302 KYD 304 (1267)
T ss_pred ccc
Confidence 443
No 166
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=37.81 E-value=53 Score=30.35 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=35.5
Q ss_pred cccCHHHHHHHHHHhCCChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 91 GLISFPEYILFVTLLSIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 91 G~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
|.|+=..-...|.....+..-+-.+|+..|.|.+|.++.+||.-+-..+
T Consensus 458 gk~sg~~ak~~mv~sklpnsvlgkiwklad~d~dg~ld~eefala~hli 506 (532)
T KOG1954|consen 458 GKLSGRNAKKEMVKSKLPNSVLGKIWKLADIDKDGMLDDEEFALANHLI 506 (532)
T ss_pred ceeccchhHHHHHhccCchhHHHhhhhhhcCCcccCcCHHHHHHHHHHH
Confidence 5555444444444445677788899999999999999999997654433
No 167
>PF11020 DUF2610: Domain of unknown function (DUF2610); InterPro: IPR021277 This family is conserved in Proteobacteria. One member is annotated as being elongation factor P but this could not be confirmed.
Probab=37.11 E-value=56 Score=22.63 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=31.8
Q ss_pred HHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHH
Q 042758 292 RAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQ 332 (364)
Q Consensus 292 ~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~ 332 (364)
..|+..-|-.+.++..+.|-+.++......|+++|.+.+--
T Consensus 36 ~WLskeRgG~IP~~V~~sl~kL~~La~~N~v~feeLc~YAL 76 (82)
T PF11020_consen 36 TWLSKERGGQIPEKVMDSLSKLYKLAKENNVSFEELCVYAL 76 (82)
T ss_pred HHHHHhhCCCCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34555567778888888888888887888899999987643
No 168
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.42 E-value=1.4e+02 Score=20.25 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=30.4
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhc
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFD 315 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D 315 (364)
..+-.|+.+-++.++.. .|.+.|+..+..+++.+-
T Consensus 34 k~NPpine~~iR~M~~q-mGqKpSe~kI~Qvm~~i~ 68 (71)
T COG3763 34 KDNPPINEEMIRMMMAQ-MGQKPSEKKINQVMRSII 68 (71)
T ss_pred hhCCCCCHHHHHHHHHH-hCCCchHHHHHHHHHHHH
Confidence 66778999999999888 899999999999988763
No 169
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=35.99 E-value=1e+02 Score=18.83 Aligned_cols=21 Identities=10% Similarity=0.257 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHhCCCCCHHHH
Q 042758 286 TKRDFQRAASKVCGISISDNVV 307 (364)
Q Consensus 286 s~~Ef~~~l~~~~~~~ls~~e~ 307 (364)
+.+++..+.+. .|..+|.+++
T Consensus 28 ~~~e~~~lA~~-~Gy~ft~~el 48 (49)
T PF07862_consen 28 NPEEVVALARE-AGYDFTEEEL 48 (49)
T ss_pred CHHHHHHHHHH-cCCCCCHHHh
Confidence 66888888877 7888887765
No 170
>PRK01844 hypothetical protein; Provisional
Probab=35.41 E-value=1.4e+02 Score=20.32 Aligned_cols=39 Identities=10% Similarity=0.212 Sum_probs=32.6
Q ss_pred HhhhcccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q 042758 275 IFTYGKVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVF 314 (364)
Q Consensus 275 ~~~~d~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~ 314 (364)
+..+-..+-.|+.+-++..+.. .|..+|+..+..+++.+
T Consensus 29 ~~k~lk~NPpine~mir~Mm~Q-MGqkPSekki~Q~m~~m 67 (72)
T PRK01844 29 MMNYLQKNPPINEQMLKMMMMQ-MGQKPSQKKINQMMSAM 67 (72)
T ss_pred HHHHHHHCCCCCHHHHHHHHHH-hCCCccHHHHHHHHHHH
Confidence 3333366778999999999998 89999999999999887
No 171
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=35.30 E-value=1.3e+02 Score=21.28 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=39.6
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh-CC-ChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhh
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL-SI-PESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l-~~-~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
...++..=. ..-.|.+.+|...+... .. ...+...+=..+|.-.+|+||.=||-.+.+..+.
T Consensus 10 ~~FW~~~Fg-~r~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtRlFqP 73 (85)
T PF02761_consen 10 AEFWKTSFG-KRTIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTRLFQP 73 (85)
T ss_dssp HHHHHHHHT-T-SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHHHT--
T ss_pred HHHHHHHCC-CCeEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHHHHhh
Confidence 444543322 23569999999998875 22 2233344445689999999999999988876643
No 172
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=35.07 E-value=78 Score=31.95 Aligned_cols=165 Identities=13% Similarity=0.172 Sum_probs=91.7
Q ss_pred HHhhhhhhh----cCCChHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhh--hhccccCccCCCcccCChhH
Q 042758 7 FFNYEKRIR----MQSPPEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRV--REGFLRGERVPGELLCAPSK 80 (364)
Q Consensus 7 ~~~~e~~~r----~~~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~ 80 (364)
+....|+++ ..+...++|....- ..+.-.|.+.+.+.++.... ..+ ..+.++. .+-.+..-+.-
T Consensus 405 lr~LQK~l~ldlv~ltl~l~if~~h~l---~~~~e~m~~~~~i~~L~~~y-----~~l~e~~g~~v~--v~l~vD~~lN~ 474 (966)
T KOG4286|consen 405 LRRLQKALCLDLLSLSLALDALDQHNL---KQNDQPMDILQIINCLTTIY-----DRLEQEHGNLVN--VPLCVDMCLNW 474 (966)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHhcc---cccCcCCCHHHHHHHHHHHH-----HHHHHHcccccc--cchHHHHHHHH
Confidence 334445554 23344555555443 24666788888888875321 111 0111111 12223333457
Q ss_pred HHHHHcCCCCcccCHHHHHHHHHHh--CCChhhHHHHHhhhccCCCCCccHHHHHHHHHHHhhhhh-hccccccccccCC
Q 042758 81 FFMLFDTNNDGLISFPEYILFVTLL--SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNLMRSENK-QAARHRDGRRVGF 157 (364)
Q Consensus 81 lf~~~D~d~dG~I~~~Ef~~~~~~l--~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~~~~~~-~~~~~~~~~~~~~ 157 (364)
+++.||...+|.|..-+|...+..+ ...++.++-+|..+-.+++-.+ ...|...|..+-.... -|... .+
T Consensus 475 llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~a------Af 547 (966)
T KOG4286|consen 475 LLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVA------AF 547 (966)
T ss_pred HHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHH------hh
Confidence 7899999999999999999888777 3457889999999865444433 6666655544322110 00000 11
Q ss_pred CCCCCcccchhhHhhhc-CCCCCccccHHHHHHHHH
Q 042758 158 KAPDQSVENGGVIEYFF-GKDGQTCLRHERFVQFLR 192 (364)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-d~~~dg~is~~eF~~~~~ 192 (364)
..++ ....+...| ..++...|++..|+.++.
T Consensus 548 GgsN----vepsvrsCF~~v~~~pei~~~~f~dw~~ 579 (966)
T KOG4286|consen 548 GGSN----IEPSVRSCFQFVNNKPEIEAALFLDWMR 579 (966)
T ss_pred cCCC----CChHHHHHHHhcCCCCcchHHHHHHHhc
Confidence 1111 111223333 457788899999998874
No 173
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=33.75 E-value=77 Score=32.73 Aligned_cols=82 Identities=11% Similarity=0.174 Sum_probs=51.5
Q ss_pred hhhhhhcCCChHHHHHhhhccccCCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCC
Q 042758 10 YEKRIRMQSPPEKVFEYFASFRTPGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNN 89 (364)
Q Consensus 10 ~e~~~r~~~~~~~~f~~f~~~~~~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~ 89 (364)
+=+.|-.++..+++|..+.. ++.-|+|.++|..+|..-.-...++. .|-....+. .++.|...+..|+
T Consensus 213 ~l~klcpR~eie~iF~ki~~----~~kpylT~~ql~dfln~~QrDpRLNe----ilfp~~~~~----r~~~liekyEp~~ 280 (1189)
T KOG1265|consen 213 LLNKLCPRPEIEEIFRKISG----KKKPYLTKEQLVDFLNKKQRDPRLNE----ILFPPADPR----RIQSLIEKYEPNS 280 (1189)
T ss_pred HHHhcCCchhHHHHHHHhcc----CCCccccHHHHHHHHhhhccCcchhh----hhcCCCCHH----HHHHHHHHcCCch
Confidence 33455566677777777775 77789999999999974322111111 111122233 3467777777775
Q ss_pred ----CcccCHHHHHHHHH
Q 042758 90 ----DGLISFPEYILFVT 103 (364)
Q Consensus 90 ----dG~I~~~Ef~~~~~ 103 (364)
+|.++-+-|+..+.
T Consensus 281 ~~a~~gqms~dgf~ryl~ 298 (1189)
T KOG1265|consen 281 DNAEKGQMSTDGFVRYLM 298 (1189)
T ss_pred hhhhccccchhhhHHHhh
Confidence 48899999987664
No 174
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=31.43 E-value=63 Score=25.30 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=30.8
Q ss_pred cccCHHHHHHHHHHhCCChhhHHHHHhhhc-------cCCCCCccHHHHHHHHHHHhh
Q 042758 91 GLISFPEYILFVTLLSIPESSFSVAFKMFD-------LNNNGEIDRDEFKKVMNLMRS 141 (364)
Q Consensus 91 G~I~~~Ef~~~~~~l~~~~~~~~~~F~~~D-------~d~~G~Is~~Ef~~~l~~~~~ 141 (364)
+.|+-.||.++-....-+...++.+.+.|. -+..+.|+++.|+.+|.....
T Consensus 6 ~~lsp~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp S-S-HHHHHHHHHHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred eccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 668888898876554333446666666652 234568999999999988744
No 175
>smart00288 VHS Domain present in VPS-27, Hrs and STAM. Unpublished observations. Domain of unknown function.
Probab=30.33 E-value=74 Score=24.61 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=35.5
Q ss_pred HHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccC
Q 042758 293 AASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERD 337 (364)
Q Consensus 293 ~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~ 337 (364)
.+..++...+++.+...++..+|.=+.+.....|-++.|+++...
T Consensus 4 ~i~kATs~~l~~~dw~~~l~icD~i~~~~~~~k~a~r~l~krl~~ 48 (133)
T smart00288 4 LIDKATSPSLLEEDWELILEICDLINSTPDGPKDAVRLLKKRLNN 48 (133)
T ss_pred HHHHHcCcCCCCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHHcC
Confidence 344446666788888889999988666678999999999999864
No 176
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=29.54 E-value=1.5e+02 Score=21.72 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=16.9
Q ss_pred HHHHHHhcccCCCCCccCHHHHHHHHH
Q 042758 198 ILQLEFAHYDCKLRGTISAKDFALSLV 224 (364)
Q Consensus 198 ~~~~~F~~~D~~~~G~i~~~ef~~~l~ 224 (364)
.+..-|..+-. +|.+....|.+++-
T Consensus 31 ~VE~RFd~La~--dG~L~rs~Fg~CIG 55 (100)
T PF08414_consen 31 EVEKRFDKLAK--DGLLPRSDFGECIG 55 (100)
T ss_dssp HHHHHHHHH-B--TTBEEGGGHHHHHT
T ss_pred HHHHHHHHhCc--CCcccHHHHHHhcC
Confidence 34444666554 88999999988874
No 177
>TIGR00135 gatC glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit. This model has been revised to remove the candidate sequence from Methanococcus jannaschii, now part of a related model.
Probab=29.53 E-value=1e+02 Score=22.05 Aligned_cols=30 Identities=10% Similarity=0.240 Sum_probs=22.6
Q ss_pred cCHHHHHHHHHHHhCCCCCHHHHHHHHHhhc
Q 042758 285 LTKRDFQRAASKVCGISISDNVVDVIFHVFD 315 (364)
Q Consensus 285 Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D 315 (364)
|+.+++.++.+. ....+++++++.+...+.
T Consensus 1 i~~~~v~~lA~L-a~L~l~eee~~~~~~~l~ 30 (93)
T TIGR00135 1 ISDEEVKHLAKL-ARLELSEEEAESFAGDLD 30 (93)
T ss_pred CCHHHHHHHHHH-hCCCCCHHHHHHHHHHHH
Confidence 567888888777 788899988776666553
No 178
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=27.99 E-value=1.4e+02 Score=19.54 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=26.5
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhc
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFD 315 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D 315 (364)
|-+-.+|.+|+...+.. ++..++..++-.||..+-
T Consensus 5 Dls~~lTeEEl~~~i~~-L~~~~~~~dm~~IW~~v~ 39 (61)
T TIGR01639 5 DLSKKLSKEELNELINS-LDEIPNRNDMLIIWNQVH 39 (61)
T ss_pred HHhHHccHHHHHHHHHh-hcCCCCHHHHHHHHHHHH
Confidence 44456888888888888 777788888888877663
No 179
>KOG4070 consensus Putative signal transduction protein p25 [General function prediction only; Signal transduction mechanisms]
Probab=27.46 E-value=1.4e+02 Score=23.60 Aligned_cols=73 Identities=16% Similarity=0.135 Sum_probs=43.5
Q ss_pred CChHHHHHhhhcccc--CCCceeeCHHHHHHhcCCCCCCCcchhhhhccccCccCCCcccCChhHHHHHHcCCCCcccCH
Q 042758 18 SPPEKVFEYFASFRT--PGGDVLMTPADLMRAIVPVFPPSESTRVREGFLRGERVPGELLCAPSKFFMLFDTNNDGLISF 95 (364)
Q Consensus 18 ~~~~~~f~~f~~~~~--~~g~~~it~~ef~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lf~~~D~d~dG~I~~ 95 (364)
+.+++.|..|+.+-. ..|. -|+-..+..++...-.-. |-.+|.. .....|+.+-.-.-+.|+|
T Consensus 12 a~~~~~f~~Fa~fGd~~asg~-em~gkn~~KlcKdc~V~D----------gK~vT~t----dt~i~fsKvkg~~~~~~tf 76 (180)
T KOG4070|consen 12 AGLEESFRAFAKFGDSKASGT-EMNGKNWDKLCKDCKVID----------GKSVTGT----DTDIVFSKVKGKKARTITF 76 (180)
T ss_pred hhHHHHHHHHHHcCCcccccc-ccccccHHHHHhhcCccc----------CCccccc----ccceeeeeccccccccccH
Confidence 457888999987643 1232 366666666654221000 0112222 2246677776667788999
Q ss_pred HHHHHHHHHh
Q 042758 96 PEYILFVTLL 105 (364)
Q Consensus 96 ~Ef~~~~~~l 105 (364)
++|...+..|
T Consensus 77 ~~fkkal~el 86 (180)
T KOG4070|consen 77 EEFKKALEEL 86 (180)
T ss_pred HHHHHHHHHH
Confidence 9999888765
No 180
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=26.89 E-value=92 Score=21.72 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=23.0
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCC
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNR 318 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~ 318 (364)
...|+||.+|+..+|.. ..++++.++.++..+...|
T Consensus 17 K~~G~lT~~eI~~~L~~---~~~~~e~id~i~~~L~~~g 52 (82)
T PF03979_consen 17 KKKGYLTYDEINDALPE---DDLDPEQIDEIYDTLEDEG 52 (82)
T ss_dssp HHHSS-BHHHHHHH-S----S---HHHHHHHHHHHHTT-
T ss_pred hhcCcCCHHHHHHHcCc---cCCCHHHHHHHHHHHHHCC
Confidence 45788999999888764 3488899999998886543
No 181
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=26.73 E-value=2.4e+02 Score=20.19 Aligned_cols=57 Identities=16% Similarity=0.246 Sum_probs=37.1
Q ss_pred hHHHHHHcCCCCcccCHHHHHHHHHHh-------------CCChhhHHHHHhhhccCCCCCccHHHHHHHHHH
Q 042758 79 SKFFMLFDTNNDGLISFPEYILFVTLL-------------SIPESSFSVAFKMFDLNNNGEIDRDEFKKVMNL 138 (364)
Q Consensus 79 ~~lf~~~D~d~dG~I~~~Ef~~~~~~l-------------~~~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~ 138 (364)
+-+|+.+ .|.+|.++..-|-.++..+ +..+..++..|... .....|+.++|...+..
T Consensus 6 RylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 6 RYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 5778888 7888999999998877542 33566778888775 35778999999998853
No 182
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=26.59 E-value=64 Score=18.07 Aligned_cols=18 Identities=28% Similarity=0.577 Sum_probs=14.0
Q ss_pred CCCCcCHHHHHHHHHhcc
Q 042758 318 RDGSISPDEFVRVLQRRE 335 (364)
Q Consensus 318 ~dg~Is~~EF~~~l~~~~ 335 (364)
++|.|+++|++.+..+..
T Consensus 1 ~~~~i~~~~~~d~a~rv~ 18 (33)
T PF09373_consen 1 SSGTISKEEYLDMASRVN 18 (33)
T ss_pred CCceecHHHHHHHHHHHH
Confidence 357889999988887764
No 183
>COG5562 Phage envelope protein [General function prediction only]
Probab=25.59 E-value=54 Score=25.33 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=20.7
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHhc
Q 042758 309 VIFHVFDTNRDGSISPDEFVRVLQRR 334 (364)
Q Consensus 309 ~lf~~~D~d~dg~Is~~EF~~~l~~~ 334 (364)
.|-..+..+.+|..||+||+..+..-
T Consensus 76 ~i~~al~~~qsGqttF~ef~~~la~A 101 (137)
T COG5562 76 LIKTALRRHQSGQTTFEEFCSALAEA 101 (137)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHhC
Confidence 44555667799999999999998764
No 184
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=25.46 E-value=1.8e+02 Score=21.50 Aligned_cols=59 Identities=12% Similarity=0.210 Sum_probs=40.4
Q ss_pred hc-ccCCCcCHHHHHHHHHH---------HhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhccc
Q 042758 278 YG-KVNGVLTKRDFQRAASK---------VCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRER 336 (364)
Q Consensus 278 ~d-~~~g~Is~~Ef~~~l~~---------~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~ 336 (364)
|| ..+-+||.+++++++.. -.|.++|...+-.|+-.-...+...++-.=...+|+-...
T Consensus 12 YDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~~~L~qlIr~yg~ 80 (107)
T TIGR01848 12 YDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLSTDFLTQIIRFYGG 80 (107)
T ss_pred cCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHhCh
Confidence 55 78888999999998875 1245678888888777776667666665554455544433
No 185
>PRK00034 gatC aspartyl/glutamyl-tRNA amidotransferase subunit C; Reviewed
Probab=25.28 E-value=1.4e+02 Score=21.39 Aligned_cols=31 Identities=10% Similarity=0.266 Sum_probs=25.1
Q ss_pred CcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhc
Q 042758 284 VLTKRDFQRAASKVCGISISDNVVDVIFHVFD 315 (364)
Q Consensus 284 ~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D 315 (364)
.|+.++++++.+. ....+++++++.+-..+.
T Consensus 2 ~i~~e~i~~la~L-a~l~l~~ee~~~~~~~l~ 32 (95)
T PRK00034 2 AITREEVKHLAKL-ARLELSEEELEKFAGQLN 32 (95)
T ss_pred CCCHHHHHHHHHH-hCCCCCHHHHHHHHHHHH
Confidence 4788899988887 788999999887776664
No 186
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=24.30 E-value=77 Score=24.36 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=33.0
Q ss_pred ceeeCHHHHHHhcCCCCCCCcchhhhhc--cccCcc---CCCcccCChhHHHHHHcCCCCcccCHHHHHHHHHHh
Q 042758 36 DVLMTPADLMRAIVPVFPPSESTRVREG--FLRGER---VPGELLCAPSKFFMLFDTNNDGLISFPEYILFVTLL 105 (364)
Q Consensus 36 ~~~it~~ef~~~l~~~~~~~~~~~~~~~--~l~~~~---~~~~~~~~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l 105 (364)
+..|+..++...+...+ ..+.++ ....-+ .+..+.-.+.-++..||.+++|.|+.-.|+.++..+
T Consensus 57 d~~l~v~~l~~~L~~iy-----~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 57 DSSLSVSQLETLLSSIY-----EFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp TSEEEHHHHHHHHHHHH-----HHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHH-----HHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHHHHHHHh
Confidence 45589999988876433 000000 000000 012222244566778888888888888888776654
No 187
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=23.98 E-value=4.3e+02 Score=22.03 Aligned_cols=29 Identities=21% Similarity=0.210 Sum_probs=17.7
Q ss_pred CCCCccCHHHHHHHHHHhcChHHHHHHHH
Q 042758 209 KLRGTISAKDFALSLVASADLSQVNKLLD 237 (364)
Q Consensus 209 ~~~G~i~~~ef~~~l~~~~~~~~~~~l~~ 237 (364)
|=+|+||++++-..+.....+.+.+.+.+
T Consensus 9 DFDGTITl~Ds~~~itdtf~~~e~k~l~~ 37 (220)
T COG4359 9 DFDGTITLNDSNDYITDTFGPGEWKALKD 37 (220)
T ss_pred cCCCceEecchhHHHHhccCchHHHHHHH
Confidence 34688888888777765444444444433
No 188
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=23.96 E-value=1.8e+02 Score=19.70 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=17.6
Q ss_pred CHHHHHHHH---HHHhCCCCCHHHHHHHHHhh
Q 042758 286 TKRDFQRAA---SKVCGISISDNVVDVIFHVF 314 (364)
Q Consensus 286 s~~Ef~~~l---~~~~~~~ls~~e~~~lf~~~ 314 (364)
-..+++.++ ..++|...+++.++.||+.|
T Consensus 41 ~a~~L~~A~~~L~~ItG~~~~ediLd~IFs~F 72 (73)
T PF12631_consen 41 VAEDLREALESLGEITGEVVTEDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHHHHHHHCTSS--HHHHHHHHCTS
T ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHhh
Confidence 334444444 34567778888899999765
No 189
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=23.46 E-value=1.4e+02 Score=20.79 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCC-CCCCcCHHHHHHHH
Q 042758 286 TKRDFQRAASKVCGISISDNVVDVIFHVFDTN-RDGSISPDEFVRVL 331 (364)
Q Consensus 286 s~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d-~dg~Is~~EF~~~l 331 (364)
..+++...| .|.+.+.+.+...+..++.+ -=|.++.+||+.+|
T Consensus 43 ~i~~le~~L---~G~~~~~~~i~~~l~~~~~~~~~~~~~~~el~~~l 86 (86)
T PF10437_consen 43 DIEELEEAL---IGCPYDREAIKEALNSVDLEDYFGNISVEELIELL 86 (86)
T ss_dssp CHHHHHHHH---TTCBSSHHHHHHHHHHCHGGGTCCTHHHHHHHHHH
T ss_pred HHHHHHHHH---HhcCCCHHHHHHHHHHhCHhhccccCCHHHHHHhC
Confidence 356666555 78899999999999999775 34689999998875
No 190
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=23.00 E-value=3.7e+02 Score=25.39 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=38.5
Q ss_pred CCCcccCHHHHHHHHHHhCC------ChhhHHHHHhhhccCCCCCccHHHHHHHHHHH
Q 042758 88 NNDGLISFPEYILFVTLLSI------PESSFSVAFKMFDLNNNGEIDRDEFKKVMNLM 139 (364)
Q Consensus 88 d~dG~I~~~Ef~~~~~~l~~------~~~~~~~~F~~~D~d~~G~Is~~Ef~~~l~~~ 139 (364)
.||...+-.||+......+. .-+.++.+-+.+|-|.+|.|+.+|=-.+++.-
T Consensus 40 agds~at~nefc~~~~~~c~s~~dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEd 97 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQDKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLRED 97 (575)
T ss_pred cCCchhhhccchhcCCchhhcccchhhHHHHHHHHHhcccccCCCcccccchHHHHHH
Confidence 56667777888765443322 23568888899999999999999988888753
No 191
>PHA02335 hypothetical protein
Probab=22.66 E-value=1.8e+02 Score=21.42 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=27.6
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 042758 177 DGQTCLRHERFVQFLRDLHEEILQLEFAHYDCKLRG 212 (364)
Q Consensus 177 ~~dg~is~~eF~~~~~~~~~~~~~~~F~~~D~~~~G 212 (364)
++...||+++|..-++++. .++..|+.|.+.|+-
T Consensus 20 ~np~sVt~ddf~~DlkRi~--yIkrllKRy~~~~~~ 53 (118)
T PHA02335 20 NNPQSVTYDDFEEDLKRFK--YIKRLFKRYLNTGEL 53 (118)
T ss_pred CCcccccHHHHHHHHHHHH--HHHHHHHhhcCCCCh
Confidence 4567899999999888775 788899999976654
No 192
>cd03569 VHS_Hrs_Vps27p VHS domain family, Hrs and Vps27p subfamily; composed of Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and its yeast homolog Vps27p (vacuolar protein sorting). The VHS domain, an essential part of Hrs/Vps27p, has a superhelical structure similar to the structure of ARM (Armadillo) repeats and is present at the N-termini of proteins. Hrs also contains a FYVE (Fab1p, YOTB, Vac1p, and EEA1) zinc finger domain C-terminal to VHS, as well as two coiled-coil domains. Hrs has been proposed to play a role in at least three vesicle trafficking events: exocytosis, endocytosis, and endosome to lysosome trafficking. Hrs is involved in promoting rapid recycling of endocytosed signaling receptors to the plasma membrane.
Probab=22.57 E-value=1.8e+02 Score=22.76 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccC
Q 042758 290 FQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERD 337 (364)
Q Consensus 290 f~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~ 337 (364)
|...+..++...+....+..+...+|.=+.......|=++.|+++...
T Consensus 5 ~~~~I~kATs~~l~~~dw~~ileicD~In~~~~~~k~a~ral~krl~~ 52 (142)
T cd03569 5 FDELIEKATSELLGEPDLASILEICDMIRSKDVQPKYAMRALKKRLLS 52 (142)
T ss_pred HHHHHHHHcCcccCccCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHcC
Confidence 445555555556677777787777776555567888999999999855
No 193
>PF13592 HTH_33: Winged helix-turn helix
Probab=21.59 E-value=1.9e+02 Score=18.66 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=28.5
Q ss_pred CCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcC
Q 042758 282 NGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDT 316 (364)
Q Consensus 282 ~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~ 316 (364)
.+..+..++...+....|+.+|..-+-.+++.+..
T Consensus 2 ~~~wt~~~i~~~I~~~fgv~ys~~~v~~lL~r~G~ 36 (60)
T PF13592_consen 2 GGRWTLKEIAAYIEEEFGVKYSPSGVYRLLKRLGF 36 (60)
T ss_pred CCcccHHHHHHHHHHHHCCEEcHHHHHHHHHHcCC
Confidence 35677888888888888998998888888888753
No 194
>cd03565 VHS_Tom1 VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein. The VHS domain has a superhelical structure similar to the structure of the ARM repeats and is present at the very N-termini of proteins. It is a right-handed superhelix of eight alpha helices. The VHS domain has been found in a number of proteins, some of which have been implicated in intracellular trafficking and sorting. The VHS domain of the Tom1 protein is essential for the negative regulation of Interleukin-1 and Tumor Necrosis Factor-induced signaling pathways.
Probab=21.33 E-value=2.1e+02 Score=22.40 Aligned_cols=63 Identities=24% Similarity=0.331 Sum_probs=41.5
Q ss_pred HHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHHHhcccCCCCCCch--hHHHHHHHHHHh
Q 042758 294 ASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVLQRRERDTARPREP--GFKGLITCWKNC 356 (364)
Q Consensus 294 l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~ 356 (364)
+..++...++......++..+|.=+++.....+=++.|+++......|+.- ...-.-.|+.+|
T Consensus 6 IekATse~l~~~dw~~ileicD~In~~~~~~k~a~ralkkRl~~~~n~~v~l~aL~LLe~~vkNC 70 (141)
T cd03565 6 IEKATDGSLQSEDWGLNMEICDIINETEDGPKDAVRALKKRLNGNKNHKEVMLTLTVLETCVKNC 70 (141)
T ss_pred HHHHcCcCCCCcCHHHHHHHHHHHhCCCCcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHc
Confidence 344455567777888888888886667788899999999998543334322 222223566665
No 195
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=20.92 E-value=2.4e+02 Score=25.92 Aligned_cols=45 Identities=13% Similarity=0.246 Sum_probs=33.5
Q ss_pred ccCCCcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhcCCCCCCcCHHHHHHHH
Q 042758 280 KVNGVLTKRDFQRAASKVCGISISDNVVDVIFHVFDTNRDGSISPDEFVRVL 331 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D~d~dg~Is~~EF~~~l 331 (364)
=.+|.||++|-...++. .-....++.++.+++.++ ||-+||-.++
T Consensus 298 IR~G~itReeal~~v~~-~d~~~~~~~~~~~~~~lg------~t~~ef~~~~ 342 (343)
T TIGR03573 298 IRSGRITREEAIELVKE-YDGEFPKEDLEYFLKYLG------ISEEEFWKTV 342 (343)
T ss_pred HHcCCCCHHHHHHHHHH-hcccccHHHHHHHHHHhC------CCHHHHHHHh
Confidence 56788888888888887 333455677888888886 6778887765
No 196
>PLN02228 Phosphoinositide phospholipase C
Probab=20.54 E-value=3.5e+02 Score=26.83 Aligned_cols=60 Identities=17% Similarity=0.309 Sum_probs=43.7
Q ss_pred ChhHHHHHHcCCCCcccCHHHHHHHHHHhC----CChhhHHHHHhhhccC----CCCCccHHHHHHHHHH
Q 042758 77 APSKFFMLFDTNNDGLISFPEYILFVTLLS----IPESSFSVAFKMFDLN----NNGEIDRDEFKKVMNL 138 (364)
Q Consensus 77 ~~~~lf~~~D~d~dG~I~~~Ef~~~~~~l~----~~~~~~~~~F~~~D~d----~~G~Is~~Ef~~~l~~ 138 (364)
++..+|..+-. ++.++.++|..++.... ...+.+..+|..+... ..|.++.+.|...|..
T Consensus 25 ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 25 SIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred HHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 45788988754 36799999999887652 2345577778777432 3478999999999954
No 197
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=20.53 E-value=1.5e+02 Score=21.48 Aligned_cols=17 Identities=12% Similarity=0.262 Sum_probs=9.0
Q ss_pred ccCCCcCHHHHHHHHHH
Q 042758 280 KVNGVLTKRDFQRAASK 296 (364)
Q Consensus 280 ~~~g~Is~~Ef~~~l~~ 296 (364)
..||.++.+|...+...
T Consensus 14 ~aDG~v~~~E~~~i~~~ 30 (111)
T cd07176 14 AADGDIDDAELQAIEAL 30 (111)
T ss_pred HhccCCCHHHHHHHHHH
Confidence 34555555555555444
No 198
>COG0721 GatC Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis]
Probab=20.24 E-value=2.1e+02 Score=20.81 Aligned_cols=31 Identities=6% Similarity=0.257 Sum_probs=25.0
Q ss_pred CcCHHHHHHHHHHHhCCCCCHHHHHHHHHhhc
Q 042758 284 VLTKRDFQRAASKVCGISISDNVVDVIFHVFD 315 (364)
Q Consensus 284 ~Is~~Ef~~~l~~~~~~~ls~~e~~~lf~~~D 315 (364)
.|+.++++++.+. ....+|+++++.+...+.
T Consensus 2 ~i~~e~v~~la~L-arL~lseee~e~~~~~l~ 32 (96)
T COG0721 2 AIDREEVKHLAKL-ARLELSEEELEKFATQLE 32 (96)
T ss_pred ccCHHHHHHHHHH-hhcccCHHHHHHHHHHHH
Confidence 5788899988877 778899999887776664
Done!