BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042760
(167 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 76 VFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+F R+DT+GDG++S+ EL D+ +LGS PD R D +GDG I
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFI 63
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
Q++ + T++ ++ F +D DGDG +S EL+ +LG +V D AD +GDG
Sbjct: 75 QMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDG 134
Query: 123 CI 124
I
Sbjct: 135 MI 136
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 66 ASLTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
+ LT++ + K F+++D +G G+++ +EL +LG + A+ N +G
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNG 61
Query: 123 CI 124
+
Sbjct: 62 QL 63
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
++ +F R+DT+GDG++S EL D+ +LGS D R D +GDG I +S
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 133 LN 134
N
Sbjct: 64 CN 65
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
++ +F R+DT+GDG++S EL D+ +LGS D R D +GDG I +S
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 62
Query: 133 LN 134
N
Sbjct: 63 CN 64
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
+VK + ++ LK F +D D +G +S EL+ +LG ++ D + ADL+GDG
Sbjct: 75 KVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVKMM 145
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
K F +D DGDG ++ +EL SL + D +G+G I +SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 133 L 133
+
Sbjct: 72 M 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ LK F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 72 KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 131
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 132 QVNYEEFVQVM 142
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ LK F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQVM 145
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ LK F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQVM 145
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 76 VFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+F R+D +GDG++S EL ++ +LGS PD D +GDG I Q
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQE 65
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 66 ASLTQQHLKSVFLRYDTDGDGRLSNQELKD 95
S+T +K + DTDGDG +S QE D
Sbjct: 39 GSITPDEVKHMMAEIDTDGDGFISFQEFTD 68
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + ++++
Sbjct: 135 QVNYEEFVTMM 145
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + ++++
Sbjct: 135 QVNYEEFVTMM 145
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + ++++
Sbjct: 136 QVNYEEFVTMM 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + ++++
Sbjct: 136 QVNYEEFVTMM 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 61 QVNYEEFVQMM 71
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 72 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 131
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 132 QVNYEEFVQMM 142
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 71 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 130
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 131 QVNYEEFVQMM 141
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 59
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 74 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 133
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 134 QVNYEEFVQMM 144
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 133 QVNYEEFVQMM 143
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D + AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 133 QVNYEEFVQMM 143
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 133 QVNYEEFVQMM 143
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 342 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 402 QVNYEEFVQMM 412
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 125 RRQSSMSLL 133
++++
Sbjct: 331 DFPEFLTMM 339
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 81 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 140
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 141 QVNYEEFVQMM 151
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQMM 145
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 342 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 402 QVNYEEFVQMM 412
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 125 RRQSSMSLL 133
++++
Sbjct: 331 DFPEFLTMM 339
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQMM 145
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 79 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 138
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 139 QVNYEEFVQMM 149
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 77 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 136
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 137 QVNYEEFVQMM 147
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
++ LK F +D D +G +S EL+ +LG ++ D + ADL+GDG + +
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 129 SMSLL 133
+ ++
Sbjct: 62 FVKMM 66
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQMM 145
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 339 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 398
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 399 QVNYEEFVQMM 409
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 125 RRQSSMSLL 133
++++
Sbjct: 328 DFPEFLTMM 336
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 64 VKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
+K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 124 IRRQSSMSLL 133
+ + + ++
Sbjct: 61 VNYEEFVQMM 70
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 436 QVNYEEFVQMM 446
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 434
Query: 123 CIRRQSSMSLLN 134
+ + + ++
Sbjct: 435 QVNYEEFVQMMT 446
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 125 RRQSSMSLL 133
++++
Sbjct: 364 DFPEFLTMM 372
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 434
Query: 123 CIRRQSSMSLLN 134
+ + + ++
Sbjct: 435 QVNYEEFVQMMT 446
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 125 RRQSSMSLL 133
++++
Sbjct: 364 DFPEFLTMM 372
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 376 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 436 QVNYEEFVQMM 446
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 123 CIRRQSSMSLLN 134
+ + + ++
Sbjct: 436 QVNYEEFVQMMT 447
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 125 RRQSSMSLL 133
++++
Sbjct: 365 DFPEFLTMM 373
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 376 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 436 QVNYEEFVQMM 446
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 375 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 434
Query: 123 CIRRQSSMSLLN 134
+ + + ++
Sbjct: 435 QVNYEEFVQMMT 446
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 125 RRQSSMSLL 133
++++
Sbjct: 364 DFPEFLTMM 372
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Query: 63 QVKASLTQ-QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD--WRAWRCHCYADLN 119
+VK S Q Q LK F D D DG + ++LKD F SLG PD A C LN
Sbjct: 7 RVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLN 66
Query: 120 GDGCIRRQSSMSLLNILSNTIICQEIDNYHLNVFVLFAEPG 160
+ L + + + ++ N F +F E G
Sbjct: 67 ---------FTAFLTLFGEKVSGTDPEDALRNAFSMFDEDG 98
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 47 KNCPR--NWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLG 101
K CP N+ F+ +V + + L++ F +D DG G + LKD +++G
Sbjct: 59 KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 377 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 436
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 437 QVNYEEFVQMM 447
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG + +
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 129 SMSLL 133
++++
Sbjct: 139 FVTMM 143
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 367 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 426
Query: 123 CIRRQSSMSLLN 134
+ + + ++
Sbjct: 427 QVNYEEFVQMMT 438
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 40 SQTKGIRKNCPRNW--LWFIDENYAQVKASLTQQHL---KSVFLRYDTDGDGRLSNQELK 94
+Q +G+ N P N + + + + LT++ + K F +D DGDG ++ +EL
Sbjct: 268 AQVRGV--NFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELG 325
Query: 95 DSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
SLG + D +GDG I
Sbjct: 326 TVMRSLGQNPTEAELQDMINEVDADGDGTI 355
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG + +
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 129 SMSLL 133
+ ++
Sbjct: 63 FVQMM 67
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 64 VKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
+K + +++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 377 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 124 IRRQSSMSLL 133
+ + + ++
Sbjct: 437 VNYEEFVQMM 446
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 125 RRQSSMSLL 133
++++
Sbjct: 365 DFPEFLTMM 373
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG + +
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 129 SMSLL 133
+ ++
Sbjct: 63 FVQMM 67
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 40/71 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D +D++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + ++++
Sbjct: 136 QVNYEEFVTMM 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG + +
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 129 SMSLL 133
+ ++
Sbjct: 64 FVQMM 68
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
++ ++ F +D DG+G +S EL+ +LG ++ D AD++GDG + +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 130 MSLL 133
+ ++
Sbjct: 61 VQMM 64
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG + D AD++GDG
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDG 135
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 136 QVNYEEFVQMM 146
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG + D AD++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQMM 145
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
++ LK F +D D +G +S EL+ +LG ++ D + ADL+GDG + +
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 129 SMSLL 133
+ ++
Sbjct: 67 FVKMM 71
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ LK F +D D +G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 123 CIRRQSSMSLL 133
I + + ++
Sbjct: 136 QINYEEFVKVM 146
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 39/71 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ ++ F +D DG+G +S EL+ +LG ++ D A+++GDG
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDG 134
Query: 123 CIRRQSSMSLL 133
+ + + ++
Sbjct: 135 QVNYEEFVQMM 145
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 48 NCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDW 107
N ++ F+ + K + +++ ++ F +D DG+G +S EL+ +LG ++ D
Sbjct: 61 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 120
Query: 108 RAWRCHCYADLNGDGCI 124
+ AD++GDG +
Sbjct: 121 EVDQXIREADIDGDGQV 137
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K + +++ LK F +D D +G +S EL+ +LG ++ D AD++GDG
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 123 CI 124
I
Sbjct: 136 QI 137
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 64 VKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
+K + +++ ++ F D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 124 IRRQSSMSLL 133
+ + + ++
Sbjct: 82 VNYEEFVQMM 91
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ LK F +D D +G +S EL+ +LG ++ D AD++GDG I +
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 129 SMSLL 133
+ ++
Sbjct: 62 FVKVM 66
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 48 NCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDW 107
N ++ F+ + K + +++ ++ F +D DG+G +S EL+ +LG ++ D
Sbjct: 60 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 108 RAWRCHCYADLNGDGCI 124
AD++GDG +
Sbjct: 120 EVDEXIREADIDGDGQV 136
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K +++ L F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
I + + ++
Sbjct: 135 HINYEEFVRMM 145
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 67 SLTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
LT++ + K F +D DGDG ++ +EL SLG + D +G+G
Sbjct: 3 ELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 124 IRRQSSMSLL 133
I +SL+
Sbjct: 63 IDFPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDG 122
++K +++ L F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 75 KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 134
Query: 123 CIRRQSSMSLL 133
I + + ++
Sbjct: 135 HINYEEFVRMM 145
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 125 RRQSSMSLL 133
+SL+
Sbjct: 64 DFPEFLSLM 72
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 64 VKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
+K +++ L F +D DG+G +S EL+ +LG ++ D AD++GDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 124 IRRQSSMSLL 133
I + + ++
Sbjct: 61 INYEEFVRMM 70
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
+++ ++ F +D DG+G +S +L+ +LG ++ D AD++GDG + +
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 129 SMSLL 133
+ ++
Sbjct: 65 FVQMM 69
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 48 NCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDW 107
N N+ F+ K + +++ ++ F +D DG+G +S EL+ +LG ++ D
Sbjct: 60 NGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 108 RAWRCHCYADLNGDGCI 124
AD++GDG +
Sbjct: 120 EVDEXIREADIDGDGQV 136
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 62 AQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDS-LGSRVPDWRAWRCHCYADLNG 120
A+ + + L+ F +DT+GDG +S EL+++ + LG +V DLNG
Sbjct: 79 AETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNG 138
Query: 121 DGCI 124
DG +
Sbjct: 139 DGRV 142
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 48 NCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDW 107
N ++ F+ ++K + ++ ++ F +D DG+G +S EL+ LG ++ D
Sbjct: 60 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE 119
Query: 108 RAWRCHCYADLNGDGCIRRQSSMSLL 133
AD +GDG + + + +L
Sbjct: 120 EVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 62 AQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDS-LGSRVPDWRAWRCHCYADLNG 120
A+ + + L+ F +DT+GDG +S EL+++ LG +V DLNG
Sbjct: 79 AETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNG 138
Query: 121 DGCI 124
DG +
Sbjct: 139 DGRV 142
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 62 AQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDS-LGSRVPDWRAWRCHCYADLNG 120
A+ + + L+ F +DT+GDG +S EL+++ LG +V DLNG
Sbjct: 93 AETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNG 152
Query: 121 DGCI 124
DG +
Sbjct: 153 DGRV 156
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSM 130
+ ++ F +D DG+G +S EL+ +LG ++ D A+++GDG + + +
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 131 SLL 133
++
Sbjct: 138 QMM 140
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 59
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWR 108
Q+K++ ++Q L F +D +GDG +S ELK S+G ++ D
Sbjct: 75 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWR 108
Q+K++ ++Q L F +D +GDG +S ELK S+G ++ D
Sbjct: 75 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSM 130
+ ++ F +D DG+G +S QEL + SLG + D++GDG + + +
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 131 SLLN 134
+LL
Sbjct: 96 TLLG 99
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
Q+K++ ++Q L F +D +GDG +S ELK S+G ++ D
Sbjct: 76 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 119
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDS-LGSRVPDWRAWRCHCYADLNGDGCI 124
+ L+ F +DT+GDG +S EL+++ LG +V DLNGDG +
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV 61
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +GDG I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 29 APALDISILVISQTKGIRKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRL 88
P+LD +IL I Q +G +K L+ + +Q + + L ++F + D +GDG+L
Sbjct: 297 VPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDET----KELTAIFHKMDKNGDGQL 352
Query: 89 SNQELKDSFDSL 100
EL + + L
Sbjct: 353 DRAELIEGYKEL 364
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWR-CHCYADLNGDGC 123
K L+++ L+ F +D+D G++S+ EL F G D W+ D N DG
Sbjct: 412 KTLLSRERLERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGE 468
Query: 124 I 124
+
Sbjct: 469 V 469
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.9 bits (76), Expect = 0.044, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 30 PALDISILVISQTKGIRKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLS 89
P+LD +IL I Q +G +K L+ + +Q + + L ++F + D +GDG+L
Sbjct: 321 PSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDET----KELTAIFHKMDKNGDGQLD 376
Query: 90 NQELKDSFDSL 100
EL + + L
Sbjct: 377 RAELIEGYKEL 387
Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWR-CHCYADLNGDG 122
K L+++ L+ F +D+D G++S+ EL F G D W+ D N DG
Sbjct: 435 KTLLSRERLERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDG 490
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.9 bits (76), Expect = 0.044, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 30 PALDISILVISQTKGIRKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLS 89
P+LD +IL I Q +G +K L+ + +Q + + L ++F + D +GDG+L
Sbjct: 322 PSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDET----KELTAIFHKMDKNGDGQLD 377
Query: 90 NQELKDSFDSL 100
EL + + L
Sbjct: 378 RAELIEGYKEL 388
Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWR-CHCYADLNGDG 122
K L+++ L+ F +D+D G++S+ EL F G D W+ D N DG
Sbjct: 436 KTLLSRERLERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDG 491
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWR 108
Q+K + ++Q L F +D +GDG +S ELK S+G ++ D
Sbjct: 76 QLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D D G +S EL SLG + D++G+ I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 125 RRQSSMSLLNILSNTIICQEIDNYHLNVFVLFAEPG 160
L ++S + C + + L F +F + G
Sbjct: 65 EFS---EFLALMSRQLKCNDSEQELLEAFKVFDKNG 97
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 29 APALDISILVISQTKGIRKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRL 88
P+LD +IL I Q +G +K L+ +++ + + L ++F + D +GDG+L
Sbjct: 297 VPSLDNAILNIRQFQGTQKLAQAALLY----XGSKLTSQDETKELTAIFHKXDKNGDGQL 352
Query: 89 SNQELKDSFDSL 100
EL + + L
Sbjct: 353 DRAELIEGYKEL 364
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWR-CHCYADLNGDGC 123
K L+++ L+ F +D+D G++S+ EL F G D W+ D N DG
Sbjct: 412 KTLLSRERLERAFRXFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGE 468
Query: 124 I 124
+
Sbjct: 469 V 469
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLG-SRVPDWRAWRCHCYADLNGDGCIRRQSSMS 131
LK ++ D DGDG+L+ +E+ F G +V D AD NGDG I + ++
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ-----IMKADANGDGYITLEEFLA 131
Query: 132 L 132
Sbjct: 132 F 132
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 81 DTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSLLN 134
DTD DG +S E K ++G + D +A C D N +G I R + +N
Sbjct: 112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 81 DTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSLLN 134
DTD DG +S E K ++G + D +A C D N +G I R + +N
Sbjct: 112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
+Q ++ F +DTDG G + +ELK + +LG + D +G G I +
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Query: 130 MSLLN 134
++++
Sbjct: 89 LTMMT 93
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F YD DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/90 (18%), Positives = 43/90 (47%)
Query: 44 GIRKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSR 103
G N ++ F+ ++K + +++ ++ F + DG+G +S +L+ +LG +
Sbjct: 357 GADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEK 416
Query: 104 VPDWRAWRCHCYADLNGDGCIRRQSSMSLL 133
+ D A ++GDG + + + ++
Sbjct: 417 LTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
+Q ++ F +DTDG G + +ELK + +LG + D +G G I +
Sbjct: 27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 86
Query: 130 MSLLN 134
++++
Sbjct: 87 LTMMT 91
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
T++ + F +D D G++S + LK LG + D AD +GDG + Q
Sbjct: 77 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
Query: 129 SMSLLN 134
+ ++
Sbjct: 137 FLRIMK 142
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
+Q ++ F +D DG G + +ELK + +LG + D G G + +
Sbjct: 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTG---KMNF 61
Query: 130 MSLLNILSNTIICQEIDNYHLNVFVLF 156
L +++ + ++ L F LF
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLF 88
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQEL 93
++ +LT + L+ + D DGDG +S QE
Sbjct: 107 ELGENLTDEELQEMIDEADRDGDGEVSEQEF 137
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
T++ + F +D D G++S + LK LG + D AD +GDG + Q
Sbjct: 19 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ- 77
Query: 129 SMSLLNILSNT 139
L I+ T
Sbjct: 78 --EFLRIMKKT 86
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQEL 93
++ +LT + L+ + D DGDG +S QE
Sbjct: 49 ELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
T++ + F +D D G++S + LK LG + D AD +GDG + Q
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ- 67
Query: 129 SMSLLNILSNT 139
L I+ T
Sbjct: 68 --EFLRIMKKT 76
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQEL 93
++ +LT + L+ + D DGDG +S QE
Sbjct: 39 ELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 57 IDENYAQVKASLTQQH---LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCH 113
ID++ + L+++ LK +F DTD G ++ ELKD +GS + +
Sbjct: 6 IDDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLM 65
Query: 114 CYADLNGDGCI 124
AD++ G I
Sbjct: 66 DAADIDKSGTI 76
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 77 FLRYDTDGDGRLSNQELKDSF--DSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSLLN 134
F +D DG+G++S +ELK F D + + + D DLNGDG I M +++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLG-SRVP 105
+L+++F+ D D G LS+QE+ D +G ++P
Sbjct: 58 NLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIP 92
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 68 LTQQHL---KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LT++ + K F +D DGDG ++ +EL SLG + D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSF--DSLGSRVPDWRAWRCHCYADLNGD 121
K+ L++ L+S F ++D DG+G++S EL F D L S+ W+ ++ +GD
Sbjct: 420 KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT--WKEMISGIDSNNDGD 476
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSL 100
+ L +F D +GDG+L QEL D + L
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKL 375
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 65 KASLTQQHLKSVFLRYDTDGDGRLSNQELKDSF--DSLGSRVPDWRAWRCHCYADLNGD 121
K+ L++ L+S F ++D DG+G++S EL F D L S+ W+ ++ +GD
Sbjct: 137 KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT--WKEMISGIDSNNDGD 193
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSL 100
+ L +F D +GDG+L QEL D + L
Sbjct: 63 KELTDIFRHIDKNGDGQLDRQELIDGYSKL 92
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 68 LTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQ 127
L+++ L + F ++D+DG G+++N+EL F W C D N DG + +
Sbjct: 394 LSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQEC--DKNNDGEVDFE 451
Query: 128 SSMSLLN 134
+ ++
Sbjct: 452 EFVEMMQ 458
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 57 IDEN-YAQVKASLTQQHL-------KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWR 108
ID+N +A+ S+ Q L K ++ D DGDG+L+ +E+ F G +
Sbjct: 53 IDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ 112
Query: 109 AWRCHCYADLNGDGCI 124
+ AD NGDG I
Sbjct: 113 VMK----ADANGDGYI 124
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 60 NYAQVKASLT-------QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAWR 111
+Y +VKA ++ +Q L+ +F D DG+G + E + S+ G + D +
Sbjct: 18 SYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGL 77
Query: 112 CHCY--ADLNGDGCIRRQSSMSLL 133
Y D++GDG + ++ S
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFF 101
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 57 IDEN-YAQVKASLTQQHL-------KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWR 108
ID+N +A+ S+ Q L K ++ D DGDG+L+ +E+ F G +
Sbjct: 53 IDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ 112
Query: 109 AWRCHCYADLNGDGCI 124
+ AD NGDG I
Sbjct: 113 VMK----ADANGDGYI 124
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 60 NYAQVKASLT-------QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAWR 111
+Y +VKA ++ +Q L+ +F D DG+G + E + S+ G + D +
Sbjct: 18 SYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGL 77
Query: 112 CHCYA--DLNGDGCIRRQSSMSLL 133
Y D++GDG + ++ S
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFF 101
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVP 105
+ LKS FL D DG G ++ ++LK + G ++P
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP 86
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
LK ++ D DGDG+L+ +E+ F G + + AD NGDG I + +
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 62
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+ L+ F +D DGDG ++ EL+ + LG +P AD++ DG +
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 59
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
+Q ++ F +DTDG G + +ELK + +LG + D +G G I +
Sbjct: 7 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEF 66
Query: 130 MSLLN 134
+ ++
Sbjct: 67 LQMMT 71
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 37/86 (43%)
Query: 52 NWLWFIDENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWR 111
++ F+ A++ +++ + F +D D G++S + LK LG + D
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 112 CHCYADLNGDGCIRRQSSMSLLNILS 137
AD +GDG + + ++ S
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTS 147
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 68 LTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQ 127
L+++ L + F ++D+DG G+++N+EL F W C D N DG + +
Sbjct: 120 LSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQEC--DKNNDGEVDFE 177
Query: 128 SSMSLL 133
+ ++
Sbjct: 178 EFVEMM 183
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 62 AQVKASLTQQ---HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADL 118
A+ +A L+++ K+ F +D DG G +S +EL LG C D
Sbjct: 8 AEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDE 67
Query: 119 NGDGCI 124
+G G I
Sbjct: 68 DGSGTI 73
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
LK +F DTD G ++ ELKD +GS + + AD++ G I
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQS 128
T++ + F +D D G++S + LK LG + D AD +GDG + Q
Sbjct: 102 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQE 161
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 67 SLTQQHLKSVFLRYDTDGDGRLSNQELK---DSFDSLGSRVPDWRAWRCHCYADLNGDGC 123
+++ +K VF D D G + +ELK SF + G + D AD +GDG
Sbjct: 38 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGK 97
Query: 124 I 124
I
Sbjct: 98 I 98
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 72 HLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMS 131
K F +D DGDG ++ +EL SLG + D +G+G I ++
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 132 LL 133
L+
Sbjct: 71 LM 72
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+++ L +F +D + DG + +EL + F + G V D D N DG I
Sbjct: 91 SEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 146
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 64 VKASLTQ---QHLKSVFLRYDTDGDGRLSNQELKDSFDSLG 101
V A TQ Q K F D D DG +S +++ +FDSLG
Sbjct: 47 VFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLG 87
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
K F +D DGDG ++ +EL SL + D +G+G I +SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 133 L 133
+
Sbjct: 72 M 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 73 LKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSMSL 132
K F +D DGDG ++ +EL SL + D +G+G I +SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 133 L 133
+
Sbjct: 72 M 72
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
Q +K F D + DG + +LK+ F SLG R PD
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLG-RTPD 36
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 12/70 (17%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRV------------PDWRAWRCHCYADL 118
+ L+ F YD D DG ++ E+ D D++ V P+ R R D
Sbjct: 99 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158
Query: 119 NGDGCIRRQS 128
N DG + Q
Sbjct: 159 NADGKLTLQE 168
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 43 KGIRKNCPRNWLWFIDEN-----YAQV---KASLTQQHLKSVFLRYDTDGDGRLSNQELK 94
+G + CP +DE+ Y+Q + T H +F +D DG+G + ++
Sbjct: 98 RGFKNECPTG---LVDEDTFKLIYSQFFPQGDATTYAHF--LFNAFDADGNGAIHFEDFV 152
Query: 95 DSFDSL-GSRVPDWRAWRCHCYADLNGDGCIRRQSSMSLLNILSNTI 140
L V + W + Y D+N DGCI ++ ++++ + + +
Sbjct: 153 VGLSILLRGTVHEKLKWAFNLY-DINKDGCITKEEMLAIMKSIYDMM 198
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+ HL + F +D DG G ++ EL+ + + G V D R D + DG I
Sbjct: 98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRI 150
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 61 YAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
+A++ L Q+ +K F D + DG + +LK+ F SLG R PD
Sbjct: 14 FARLPQKLMQE-MKEAFTMIDQNRDGFIDINDLKEMFSSLG-RTPD 57
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 61 YAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
+A++ L Q+ +K F D + DG + +LK+ F SLG R PD
Sbjct: 14 FARLPQKLMQE-MKEAFTMIDQNRDGFIDINDLKEMFSSLG-RTPD 57
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHC 114
Q +K F D + DG + +LK+ F SLG R PD +
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLG-RTPDDKELTAML 61
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 68 LTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
L+++ ++ F +D DG G++S +EL F S + D N DG +
Sbjct: 414 LSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEV 470
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+++ L F +D + DG + +EL + F + G V D D N DG I
Sbjct: 91 SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 146
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 66 ASLTQQHLKSVFLRYDTDGDGRLSNQELK---DSFDSLGSRVPDWRAWRCHCYADLNGDG 122
+ ++ +K VF D D G L +ELK F+S + + AD +GDG
Sbjct: 37 SKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDG 96
Query: 123 CI 124
I
Sbjct: 97 KI 98
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 13/89 (14%)
Query: 20 HTCRDQRKHAP-----ALDISILVISQTKGIRKNCPRNWLWFIDEN--------YAQVKA 66
CRD P +S + +Q K + + + ++DE +
Sbjct: 17 QECRDPDTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGAR 76
Query: 67 SLTQQHLKSVFLRYDTDGDGRLSNQELKD 95
LT+ KS+ D DGDG++ +E ++
Sbjct: 77 ELTESETKSLMAAADNDGDGKIGAEEFQE 105
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
T++ L +F +D + DG + +ELK + G + + D N DG I
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSF 97
+Q LK F YD DG+G + EL D F
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDMF 119
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSSM 130
+ + F D +G+G + EL+ +LG + ++GDG I +S +
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFV 135
Query: 131 SLL 133
+L
Sbjct: 136 DML 138
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+Q ++ F +D DG G + +ELK + +LG + D G G +
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
T++ L +F +D + DG + +ELK + G + + D N DG I
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNG 120
++K + ++ L+ F +D +G G + L+D+ +LG R+ + H +A+ G
Sbjct: 71 RMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL------KPHEFAEFLG 122
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 96 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 128
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 95 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 127
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.9 bits (58), Expect = 4.7, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL 100
++ L +F + D +GDG+L +EL + ++ L
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVL 384
Score = 26.6 bits (57), Expect = 7.8, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 68 LTQQHLKSVFLRYDTDGDGRLSNQELKDSF 97
+++ L+ F +DTD G+++ +EL + F
Sbjct: 432 FSEERLRRAFNLFDTDKSGKITKEELANLF 461
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 73 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 105
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
T++ L +F +D + DG + +ELK + G + + D N DG I
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 68
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 106
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAW----RCHCYADLNGDGCI 124
+Q L+ F YD D DG +SN EL + G+ + D + + AD +GDG I
Sbjct: 75 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 134
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAW----RCHCYADLNGDGCI 124
+Q L+ F YD D DG +SN EL + G+ + D + + AD +GDG I
Sbjct: 74 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 133
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLG 101
++K + +++ ++ F +D DG+G +S EL+ +LG
Sbjct: 30 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 63 QVKASLTQQHLKSVFLRYDTDGDGRLSNQEL 93
++ +LT + L+++ +D DGDG ++ E
Sbjct: 124 ELGETLTDEELRAMIEEFDLDGDGEINENEF 154
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAW----RCHCYADLNGDGCI 124
+Q L+ F YD D DG +SN EL + G+ + D + + AD +GDG I
Sbjct: 89 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 148
>pdb|2B39|A Chain A, Structure Of Mammalian C3 With An Intact Thioester At 3a
Resolution
pdb|2B39|B Chain B, Structure Of Mammalian C3 With An Intact Thioester At 3a
Resolution
Length = 1661
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 46 RKNCPRNWLWFIDENYAQVKASLTQQHLKSVFLR 79
R P +WLW + E+ Q + L +VFL+
Sbjct: 762 RSQFPESWLWTVIEDLKQADKNGISTKLMNVFLK 795
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSL-GSRVPDWRAW----RCHCYADLNGDGCI 124
+Q L+ F YD D DG +SN EL + G+ + D + + AD +GDG I
Sbjct: 88 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 147
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
T++ L +F +D + DG + +ELK + G + + D N DG I
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 63
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 71 QHLKSVFLRYDTDGDGRLSNQELKDSFD-SLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
++++ +F +D + DG + E + L +V W Y D++G+GCI R
Sbjct: 52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLY-DVDGNGCIDRG-- 108
Query: 130 MSLLNIL 136
LLNI+
Sbjct: 109 -ELLNII 114
>pdb|3J1Z|P Chain P, Inward-facing Conformation Of The Zinc Transporter Yiip
Revealed By Cryo-electron Microscopy
pdb|3J1Z|Q Chain Q, Inward-facing Conformation Of The Zinc Transporter Yiip
Revealed By Cryo-electron Microscopy
Length = 306
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRV 104
T+Q K+VF+++ + DG LS E D+ G RV
Sbjct: 238 TRQAGKTVFIQFHLELDGNLSLNEAHSITDTTGLRV 273
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 59 ENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELK 94
+N++ LT K+ DTDGDG++ +E +
Sbjct: 68 KNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 103
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 59 ENYAQVKASLTQQHLKSVFLRYDTDGDGRLSNQELK 94
+N++ LT K+ DTDGDG++ +E +
Sbjct: 69 KNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 77 FLRYDTDGDGRLSNQELKDSFDSLGSRV 104
F+ +DTD G + QEL+ + ++G R+
Sbjct: 109 FISFDTDRSGTVDPQELQKALTTMGFRL 136
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCIRRQSS 129
QQ K F +D D D +L+ +EL +LG+ + D + G +++
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETF 72
Query: 130 MSLL 133
++++
Sbjct: 73 LTIM 76
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 74 KSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPD 106
++VF YD D G + ELK + G R+ D
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQALSGAGYRLSD 109
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 69 TQQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRVPDWRAWRCHCYADLNGDGCI 124
+++ L +F +D + DG + +ELK + G + + D N DG I
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 66 ASLTQQHLKSVFLRYDTDGDGRLSNQEL 93
A T Q L+ F YD DG+G +S E+
Sbjct: 94 AGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.2 bits (56), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 70 QQHLKSVFLRYDTDGDGRLSNQELKDSFDSLGSRV------------PDWRAWRCHCYAD 117
+Q LK F YD DG+G +S E+ + ++ V P+ R + D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 118 LNGDGCI 124
N DG +
Sbjct: 158 TNRDGKL 164
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,172,765
Number of Sequences: 62578
Number of extensions: 193002
Number of successful extensions: 1018
Number of sequences better than 100.0: 188
Number of HSP's better than 100.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 641
Number of HSP's gapped (non-prelim): 341
length of query: 167
length of database: 14,973,337
effective HSP length: 92
effective length of query: 75
effective length of database: 9,216,161
effective search space: 691212075
effective search space used: 691212075
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 48 (23.1 bits)